Mercurial > repos > galaxy-australia > blobtools
comparison test-data/test.blobDB.table.txt @ 0:234b3e869b16 draft default tip
"planemo upload for repository https://github.com/usegalaxy-au/tools-au/tree/master/tools/blobtools commit 89d41433582a6470135c026aad07b714eb3145d4"
| author | galaxy-australia |
|---|---|
| date | Wed, 26 Oct 2022 06:54:04 +0000 |
| parents | |
| children |
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| -1:000000000000 | 0:234b3e869b16 |
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| 1 ## 1.1.1 | |
| 2 ## assembly : /home/mthang/tools/blobtools/example/assembly.fna | |
| 3 ## coverage bam0 - /home/mthang/tools/blobtools/example/mapping_1.sorted.bam | |
| 4 ## taxonomy tax0 - /home/mthang/tools/blobtools/example/blast.out | |
| 5 ## nodesDB : None | |
| 6 ## taxrule : bestsum | |
| 7 ## min_score : 0.0 | |
| 8 ## min_diff : 0.0 | |
| 9 ## tax_collision_random : False | |
| 10 ## | |
| 11 # name length GC N bam0 phylum.t.6%s phylum.s.7%s phylum.c.8 | |
| 12 contig_1 756 0.2606 0 120.8277 Actinobacteria 200.0 0 | |
| 13 contig_2 1060 0.2623 0 197.1055 Actinobacteria 2300.0 0 | |
| 14 contig_3 602 0.2342 0 77.3078 Actinobacteria 10000.0 0 | |
| 15 contig_4 951 0.3155 0 545.5981 Actinobacteria 1000.0 0 | |
| 16 contig_5 614 0.329 0 183.8478 Nematoda 2000.0 0 | |
| 17 contig_6 216 0.1944 0 59.5953 Tardigrada 4000.0 2 | |
| 18 contig_7 4060 0.2584 0 61.2776 Nematoda 2000.0 0 | |
| 19 contig_8 2346 0.2801 0 106.364 unresolved 2000.0 1 | |
| 20 contig_9 1599 0.2439 0 85.7676 Nematoda 200.0 0 | |
| 21 contig_10 6273 0.3067 0 336.4195 no-hit 0.0 0 |