view macros.xml @ 0:234b3e869b16 draft default tip

"planemo upload for repository https://github.com/usegalaxy-au/tools-au/tree/master/tools/blobtools commit 89d41433582a6470135c026aad07b714eb3145d4"

<macros>
    <xml name="requirements">
	   <requirements>
		   <requirement type="package" version="1.1.1">blobtools</requirement>
		   <requirement type="package" version="3.2.2">matplotlib</requirement>
           </requirements>
   </xml>
   <xml name="stdio">
     <stdio>
        <exit_code range=":-1"  level="fatal" description="Error: Cannot open file" />
        <exit_code range="1:"  level="fatal" description="Error" />
     </stdio>
   </xml>
  <xml name="version_command">
      <version_command><![CDATA[
	      blobtools --version 2>&1 | head -1       
      ]]></version_command>
  </xml>
  <xml name="macro_create_input">
	  <param name="input_fasta" type="data" format="fasta" label="Sequence file"/>
	  <param name="input_bam" type="data" format="bam" label="Alignment file"/>
	  <param name="input_blast" type="data" format="tabular" label="Simplified Blast file"/>
  </xml>
  <xml name="macro_view_input">
	  <param name="input_json" type="data" format="json" label="Json input file"/>
  </xml>
  <token name="@SET_TMP_DIR@">
	export MPLCONFIGDIR="/tmp"
  </token>
</macros>