Mercurial > repos > galaxy-australia > cactus_cactus
comparison cactus_cactus.xml @ 5:48c13389050d draft
planemo upload for repository https://github.com/usegalaxy-au/tools-au commit ba63cf533f414ebc8f17bbe4b6ea852b561dd7d1
| author | galaxy-australia |
|---|---|
| date | Mon, 14 Nov 2022 06:03:59 +0000 |
| parents | 3c8227556fdc |
| children | a74dbfee5a86 |
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| 4:3c8227556fdc | 5:48c13389050d |
|---|---|
| 104 <!-- root mr --> | 104 <!-- root mr --> |
| 105 </inputs> | 105 </inputs> |
| 106 <outputs> | 106 <outputs> |
| 107 <data name="out_hal" format="h5" from_work_dir="alignment.hal" label="${tool.name} on ${on_string} (HAL file)" /> | 107 <data name="out_hal" format="h5" from_work_dir="alignment.hal" label="${tool.name} on ${on_string} (HAL file)" /> |
| 108 <data name="out_gfa" format="gfa2.gz" from_work_dir="alignment.gfa.gz" label="${tool.name} on ${on_string} (GFA file)" > | 108 <data name="out_gfa" format="gfa2.gz" from_work_dir="alignment.gfa.gz" label="${tool.name} on ${on_string} (GFA file)" > |
| 109 <filter>aln_mode[aln_mode_select] == 'intraspecies'</filter> | 109 <filter>aln_mode['aln_mode_select'] == 'intraspecies'</filter> |
| 110 </data> | 110 </data> |
| 111 </outputs> | 111 </outputs> |
| 112 <tests> | 112 <tests> |
| 113 <!-- test interspecies mode --> | 113 <!-- test interspecies mode --> |
| 114 <test expect_num_outputs="2"> | 114 <test expect_num_outputs="1"> |
| 115 <conditional name="aln_mode"> | 115 <conditional name="aln_mode"> |
| 116 <param name="aln_mode_select" value="interspecies"/> | 116 <param name="aln_mode_select" value="interspecies"/> |
| 117 <param name="in_tree" value="test_tree.nhx"/> | 117 <param name="in_tree" value="test_tree.nhx"/> |
| 118 </conditional> | 118 </conditional> |
| 119 <repeat name="in_seqs"> | 119 <repeat name="in_seqs"> |