Mercurial > repos > galaxy-australia > dorado
diff README.md @ 1:fc5b6491cf78 draft
planemo upload for repository https://github.com/usegalaxy-au/tools-au/tree/main/tools/dorado commit c42b6e3fd2cf6d26e231645a9e8a2986503279e2
author | galaxy-australia |
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date | Mon, 22 Jul 2024 04:51:23 +0000 |
parents | 63d8ecfcfab1 |
children | 99c9427219d3 |
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--- a/README.md Fri Jun 28 03:39:11 2024 +0000 +++ b/README.md Mon Jul 22 04:51:23 2024 +0000 @@ -25,8 +25,8 @@ Because models can be added and removed, models are listed **per container** in the loc file. -Here's some code to **append** the models from the container with hash -`1c65eb070a9fc1d88710c4dc09b06541f96fdd28` to the loc file. +Here's some code to update the loc file with models from the container with hash +`1c65eb070a9fc1d88710c4dc09b06541f96fdd28`. ```bash export DORADO_HASH="1c65eb070a9fc1d88710c4dc09b06541f96fdd28" @@ -34,7 +34,7 @@ apptainer exec "docker://nanoporetech/dorado:sha${DORADO_HASH}" \ ls /models | \ awk -v hash="${DORADO_HASH}" '{print hash "_" $0 "\t" hash "\t" $0 "\t/models/" $0}' \ - >> tool-data/dorado_models.loc.sample + > tool-data/dorado_models.loc.sample ``` The loc file doesn't have a header, so you can keep it sorted.