Mercurial > repos > galaxy-australia > dorado_pod5_convert

diff README.md @ 1:28928576e1ea draft

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planemo upload for repository https://github.com/usegalaxy-au/tools-au/tree/main/tools/dorado commit c42b6e3fd2cf6d26e231645a9e8a2986503279e2
author galaxy-australia
date Mon, 22 Jul 2024 04:51:13 +0000
parents 18a8d140ec6f
children 7c47b3c9e493
line wrap: on
line diff
--- a/README.md	Fri Jun 28 03:38:39 2024 +0000
+++ b/README.md	Mon Jul 22 04:51:13 2024 +0000
@@ -25,8 +25,8 @@
 Because models can be added and removed, models are listed **per container** in
 the loc file.
 
-Here's some code to **append** the models from the container with hash
-`1c65eb070a9fc1d88710c4dc09b06541f96fdd28`  to the loc file.
+Here's some code to update the loc file with models from the container with hash
+`1c65eb070a9fc1d88710c4dc09b06541f96fdd28`.
 
 ```bash
 export DORADO_HASH="1c65eb070a9fc1d88710c4dc09b06541f96fdd28"
@@ -34,7 +34,7 @@
 apptainer exec "docker://nanoporetech/dorado:sha${DORADO_HASH}" \
     ls /models | \
     awk -v hash="${DORADO_HASH}" '{print hash "_" $0 "\t" hash "\t" $0 "\t/models/" $0}' \
-    >> tool-data/dorado_models.loc.sample
+    > tool-data/dorado_models.loc.sample
 ```
 
 The loc file doesn't have a header, so you can keep it sorted.