Mercurial > repos > galaxy-australia > kmc
comparison macros.xml @ 2:c97f8a687258 draft
planemo upload for repository https://github.com/usegalaxy-au/tools-au/tree/master/tools/kmc commit 3be367228b531c346c10700f07d57ae44394be36-dirty
| author | galaxy-australia |
|---|---|
| date | Wed, 02 Oct 2024 08:34:43 +0000 |
| parents | c7fda6e88567 |
| children |
comparison
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| 1:c7fda6e88567 | 2:c97f8a687258 |
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| 93 </xml> | 93 </xml> |
| 94 <xml name="counter_calculation_option"> | 94 <xml name="counter_calculation_option"> |
| 95 <param name="min_kmer_occurrence" argument="-ci" type="integer" optional="true" label="exclude k-mers occurring less than x times"/> | 95 <param name="min_kmer_occurrence" argument="-ci" type="integer" optional="true" label="exclude k-mers occurring less than x times"/> |
| 96 <param name="max_kmer_occurrence" argument="-cx" type="integer" optional="true" label="exclude k-mers occurring more of than x times"/> | 96 <param name="max_kmer_occurrence" argument="-cx" type="integer" optional="true" label="exclude k-mers occurring more of than x times"/> |
| 97 <param name="max_counter_value" argument="-cs" type="integer" optional="true" label="maximal value of a counter"/> | 97 <param name="max_counter_value" argument="-cs" type="integer" optional="true" label="maximal value of a counter"/> |
| 98 <param argument="-oc" name="oc" type="select" optional="true" label="Counter Calculation" help="redefine counter calculation mode for equal k-mers"> | 98 <param argument="-oc" type="select" optional="true" label="Counter Calculation" help="redefine counter calculation mode for equal k-mers"> |
| 99 <option value="min">min - get lower value of a k-mer counter</option> | 99 <option value="min">min - get lower value of a k-mer counter</option> |
| 100 <option value="max">max - get upper value of a k-mer counter</option> | 100 <option value="max">max - get upper value of a k-mer counter</option> |
| 101 <option value="sum">sum - get sum of counters from both databases</option> | 101 <option value="sum">sum - get sum of counters from both databases</option> |
| 102 <option value="diff">diff - get difference between counters </option> | 102 <option value="diff">diff - get difference between counters </option> |
| 103 <option value="left">left - get counter from first datatabase (KMC db one)</option> | 103 <option value="left">left - get counter from first datatabase (KMC db one)</option> |