diff test-data/gene_presence_absence.csv @ 0:01864c78c5a5 draft default tip

planemo upload for repository https://github.com/usegalaxy-au/tools-au/tree/master/tools/panaroo commit 3be367228b531c346c10700f07d57ae44394be36-dirty

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/gene_presence_absence.csv	Tue Aug 27 05:51:12 2024 +0000
@@ -0,0 +1,252 @@
+Gene,Non-unique Gene name,Annotation,10_small,11_small
+group_153,,hypothetical protein,KPLBOJCC_00152,NCFNLLIC_00152
+dcd,dcd,dCTP deaminase,KPLBOJCC_00237,NCFNLLIC_00237
+group_152,,putative HTH-type transcriptional regulator,KPLBOJCC_00108,NCFNLLIC_00108
+trmB,trmB,tRNA (guanine-N(7)-)-methyltransferase,KPLBOJCC_00120,NCFNLLIC_00120
+betI_1,betI_1,HTH-type transcriptional regulator BetI,KPLBOJCC_00244,NCFNLLIC_00244
+group_151,,hypothetical protein,KPLBOJCC_00042,NCFNLLIC_00042
+group_150,,hypothetical protein,KPLBOJCC_00040,NCFNLLIC_00040
+group_149,,hypothetical protein,KPLBOJCC_00251,NCFNLLIC_00251
+group_148,,hypothetical protein,KPLBOJCC_00231,NCFNLLIC_00231
+group_147,,hypothetical protein,KPLBOJCC_00186,NCFNLLIC_00186
+gmhA,gmhA,Phosphoheptose isomerase,KPLBOJCC_00019,NCFNLLIC_00019
+group_146,,hypothetical protein,KPLBOJCC_00245,NCFNLLIC_00245
+group_145,,hypothetical protein,KPLBOJCC_00218,NCFNLLIC_00218
+kstR2_1,kstR2_1,HTH-type transcriptional repressor KstR2,KPLBOJCC_00067,NCFNLLIC_00067
+ybgJ,ybgJ,putative protein YbgJ,KPLBOJCC_00177,NCFNLLIC_00177
+group_144,,hypothetical protein,KPLBOJCC_00224,NCFNLLIC_00224
+pcm,pcm,Protein-L-isoaspartate O-methyltransferase,KPLBOJCC_00097,NCFNLLIC_00097
+group_143,,hypothetical protein,KPLBOJCC_00111,NCFNLLIC_00111
+group_142,,hypothetical protein,KPLBOJCC_00236,NCFNLLIC_00236
+group_141,,hypothetical protein,KPLBOJCC_00229,NCFNLLIC_00229
+pcp,pcp,Pyrrolidone-carboxylate peptidase,KPLBOJCC_00235,NCFNLLIC_00235
+mshB_1,mshB_1,1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase,KPLBOJCC_00239,NCFNLLIC_00239
+group_140,,hypothetical protein,KPLBOJCC_00240,NCFNLLIC_00240
+group_139,,hypothetical protein,KPLBOJCC_00145,NCFNLLIC_00145
+group_138,,hypothetical protein,KPLBOJCC_00112,NCFNLLIC_00112
+group_137,,hypothetical protein,KPLBOJCC_00084,NCFNLLIC_00084
+group_136,,hypothetical protein,KPLBOJCC_00223,NCFNLLIC_00223
+bluB,bluB,56-dimethylbenzimidazole synthase,KPLBOJCC_00221,NCFNLLIC_00221
+group_135,,hypothetical protein,KPLBOJCC_00189,NCFNLLIC_00189
+group_134,,hypothetical protein,KPLBOJCC_00119,NCFNLLIC_00119
+group_133,,Putative quercetin 23-dioxygenase,KPLBOJCC_00090,NCFNLLIC_00090
+group_132,,hypothetical protein,KPLBOJCC_00087,NCFNLLIC_00087
+ugpQ,ugpQ,Glycerophosphodiester phosphodiesterase cytoplasmic,KPLBOJCC_00232,NCFNLLIC_00232
+group_131,,hypothetical protein,KPLBOJCC_00246,NCFNLLIC_00246
+group_130,,hypothetical protein,KPLBOJCC_00172,NCFNLLIC_00172
+frdB_1,frdB_1,Fumarate reductase iron-sulfur subunit,KPLBOJCC_00161,NCFNLLIC_00161
+group_129,,hypothetical protein,KPLBOJCC_00093,NCFNLLIC_00093
+glpG,glpG,Rhomboid protease GlpG,KPLBOJCC_00016,NCFNLLIC_00016
+ldtA,ldtA,LD-transpeptidase 1,KPLBOJCC_00023,NCFNLLIC_00023
+group_128,,putative methyltransferase,KPLBOJCC_00136,NCFNLLIC_00136
+group_127,,LD-transpeptidase 4,KPLBOJCC_00103,NCFNLLIC_00103
+group_126,,hypothetical protein,KPLBOJCC_00107,NCFNLLIC_00107
+group_125,,hypothetical protein,KPLBOJCC_00234,NCFNLLIC_00234
+group_124,,hypothetical protein,KPLBOJCC_00035,NCFNLLIC_00035
+group_123,,hypothetical protein,KPLBOJCC_00248,NCFNLLIC_00248
+tam,tam,putative trans-aconitate 2-methyltransferase,KPLBOJCC_00210,NCFNLLIC_00210
+caiD_1,caiD_1,Carnitinyl-CoA dehydratase,KPLBOJCC_00134,NCFNLLIC_00134
+group_122,,hypothetical protein,KPLBOJCC_00074,NCFNLLIC_00074
+group_121,,hypothetical protein,KPLBOJCC_00076,NCFNLLIC_00076
+stf0,stf0,Trehalose 2-sulfotransferase,KPLBOJCC_00211,NCFNLLIC_00211
+group_120,,hypothetical protein,KPLBOJCC_00163,NCFNLLIC_00163
+group_119,,hypothetical protein,KPLBOJCC_00061,NCFNLLIC_00061
+group_118,,hypothetical protein,KPLBOJCC_00155,NCFNLLIC_00155
+group_117,,hypothetical protein,KPLBOJCC_00051,NCFNLLIC_00051
+group_116,,hypothetical protein,KPLBOJCC_00230,NCFNLLIC_00230
+group_115,,Putative short-chain type dehydrogenase/reductase,KPLBOJCC_00055,NCFNLLIC_00055
+rmlA,rmlA,Glucose-1-phosphate thymidylyltransferase,KPLBOJCC_00250,NCFNLLIC_00250
+group_114,,hypothetical protein,KPLBOJCC_00077,NCFNLLIC_00077
+group_113,,Putative dioxygenase,KPLBOJCC_00003,NCFNLLIC_00003
+espG3,espG3,ESX-3 secretion-associated protein EspG3,KPLBOJCC_00205,NCFNLLIC_00205
+group_112,,Monoacylglycerol lipase,KPLBOJCC_00092,NCFNLLIC_00092
+ybgK,ybgK,putative protein YbgK,KPLBOJCC_00176,NCFNLLIC_00176
+group_111,,Soluble epoxide hydrolase,KPLBOJCC_00041,NCFNLLIC_00041
+dnaK_1,dnaK_1,Chaperone protein DnaK,KPLBOJCC_00227,NCFNLLIC_00227
+group_110,,hypothetical protein,KPLBOJCC_00219,NCFNLLIC_00219
+group_109,,Putative S-adenosyl-L-methionine-dependent methyltransferase,KPLBOJCC_00197,NCFNLLIC_00197
+aes_1,aes_1,Acetyl esterase,KPLBOJCC_00129,NCFNLLIC_00129
+group_108,,putative protein,KPLBOJCC_00190,NCFNLLIC_00190
+group_107,,hypothetical protein,KPLBOJCC_00049,NCFNLLIC_00049
+group_106,,Putative S-adenosyl-L-methionine-dependent methyltransferase,KPLBOJCC_00053,NCFNLLIC_00053
+nrdB,nrdB,R2-like ligand binding oxidase,KPLBOJCC_00146,NCFNLLIC_00146
+oxyR,oxyR,putative hydrogen peroxide-inducible genes activator,KPLBOJCC_00024,NCFNLLIC_00024
+group_105,,Putative S-adenosyl-L-methionine-dependent methyltransferase,KPLBOJCC_00052,NCFNLLIC_00052
+rmd,rmd,GDP-6-deoxy-D-mannose reductase,KPLBOJCC_00018,NCFNLLIC_00018
+group_104,,hypothetical protein,KPLBOJCC_00085,NCFNLLIC_00085
+group_103,,2-haloacrylate reductase,KPLBOJCC_00056,NCFNLLIC_00056
+nadR,nadR,Trifunctional NAD biosynthesis/regulator protein NadR,KPLBOJCC_00124,NCFNLLIC_00124
+php,php,Phosphotriesterase homology protein,KPLBOJCC_00143,NCFNLLIC_00143
+group_102,,hypothetical protein,KPLBOJCC_00178,NCFNLLIC_00178
+eccE3,eccE3,ESX-3 secretion system protein EccE3,KPLBOJCC_00208,NCFNLLIC_00208
+sigG,sigG,ECF RNA polymerase sigma factor SigG,KPLBOJCC_00091,NCFNLLIC_00091
+mch,mch,Beta-methylmalyl-CoA dehydratase,KPLBOJCC_00128,NCFNLLIC_00128
+auaH,auaH,Aurachin B dehydrogenase,KPLBOJCC_00046,NCFNLLIC_00046
+fbpC,fbpC,Diacylglycerol acyltransferase/mycolyltransferase Ag85C,KPLBOJCC_00036,NCFNLLIC_00036
+group_101,,hypothetical protein,KPLBOJCC_00079,NCFNLLIC_00079
+group_100,,hypothetical protein,KPLBOJCC_00032,NCFNLLIC_00032
+mcd,mcd,(2S)-methylsuccinyl-CoA dehydrogenase,KPLBOJCC_00127,NCFNLLIC_00127
+fgd2,fgd2,F420-dependent hydroxymycolic acid dehydrogenase,KPLBOJCC_00039,NCFNLLIC_00039
+group_99,,hypothetical protein,KPLBOJCC_00121,NCFNLLIC_00121
+pntAA,pntAA,NAD(P) transhydrogenase subunit alpha part 1,KPLBOJCC_00063,NCFNLLIC_00063
+group_98,,Putative transport protein,KPLBOJCC_00117,NCFNLLIC_00117
+group_97,,hypothetical protein,KPLBOJCC_00088,NCFNLLIC_00088
+adhB_1,adhB_1,Alcohol dehydrogenase B,KPLBOJCC_00071,NCFNLLIC_00071
+group_96,,hypothetical protein,KPLBOJCC_00185,NCFNLLIC_00185
+group_95,,hypothetical protein,KPLBOJCC_00173,NCFNLLIC_00173
+group_94,,hypothetical protein,KPLBOJCC_00047,NCFNLLIC_00047
+hisB_1,hisB_1,Histidine biosynthesis bifunctional protein HisB,KPLBOJCC_00020,NCFNLLIC_00020
+gtf1,gtf1,Glycosyltransferase Gtf1,KPLBOJCC_00137,NCFNLLIC_00137
+hddA,hddA,D-glycero-alpha-D-manno-heptose 7-phosphate kinase,KPLBOJCC_00021,NCFNLLIC_00021
+group_93,,hypothetical protein,KPLBOJCC_00140,NCFNLLIC_00140
+group_92,,hypothetical protein,KPLBOJCC_00247,NCFNLLIC_00247
+nagZ,nagZ,Beta-hexosaminidase,KPLBOJCC_00151,NCFNLLIC_00151
+lprN_1,lprN_1,Lipoprotein LprN,KPLBOJCC_00082,NCFNLLIC_00082
+group_91,,hypothetical protein,KPLBOJCC_00105,NCFNLLIC_00105
+group_90,,hypothetical protein,KPLBOJCC_00066,NCFNLLIC_00066
+group_89,,hypothetical protein,KPLBOJCC_00182,NCFNLLIC_00182
+mymT,mymT,Metallothionein,KPLBOJCC_00096,NCFNLLIC_00096
+group_88,,putative protein,KPLBOJCC_00012,NCFNLLIC_00012
+group_87,,hypothetical protein,KPLBOJCC_00209,NCFNLLIC_00209
+group_86,,hypothetical protein,KPLBOJCC_00132,NCFNLLIC_00132
+caiA_1,caiA_1,Crotonobetainyl-CoA dehydrogenase,KPLBOJCC_00062,NCFNLLIC_00062
+group_85,,Putative secreted protein.1,KPLBOJCC_00150,NCFNLLIC_00150
+group_84,,hypothetical protein,KPLBOJCC_00029,NCFNLLIC_00029
+group_83,,hypothetical protein,KPLBOJCC_00022,NCFNLLIC_00022
+group_82,,Putative antitoxin VapB51,KPLBOJCC_00142,NCFNLLIC_00142
+group_81,,hypothetical protein,KPLBOJCC_00226,NCFNLLIC_00226
+sotB,sotB,sugar efflux transporter,KPLBOJCC_00101,NCFNLLIC_00101
+group_80,,hypothetical protein,KPLBOJCC_00188,NCFNLLIC_00188
+vapB2,vapB2,Antitoxin VapB2,KPLBOJCC_00216,NCFNLLIC_00216
+porA,porA,Porin PorA,KPLBOJCC_00139,NCFNLLIC_00139
+group_79,,hypothetical protein,KPLBOJCC_00116,NCFNLLIC_00116
+group_78,,hypothetical protein,KPLBOJCC_00241,NCFNLLIC_00241
+group_77,,putative PE-PGRS family protein PE_PGRS24,KPLBOJCC_00060,NCFNLLIC_00060
+group_76,,Antitoxin,KPLBOJCC_00214,NCFNLLIC_00214
+group_75,,hypothetical protein,KPLBOJCC_00160,NCFNLLIC_00160
+group_74,,hypothetical protein,KPLBOJCC_00153,NCFNLLIC_00153
+group_73,,hypothetical protein,KPLBOJCC_00125,NCFNLLIC_00125
+fadI,fadI,3-ketoacyl-CoA thiolase FadI,KPLBOJCC_00157,NCFNLLIC_00157
+group_72,,Putative cytochrome P450 138,KPLBOJCC_00043,NCFNLLIC_00043
+group_71,,hypothetical protein,KPLBOJCC_00014,NCFNLLIC_00014
+group_70,,hypothetical protein,KPLBOJCC_00130,NCFNLLIC_00130
+group_69,,putative protein,KPLBOJCC_00006,NCFNLLIC_00006
+rkpK,rkpK,UDP-glucose 6-dehydrogenase,KPLBOJCC_00238,NCFNLLIC_00238
+bbsG,bbsG,(R)-benzylsuccinyl-CoA dehydrogenase,KPLBOJCC_00038,NCFNLLIC_00038
+group_68,,Putative cytochrome P450 135A1,KPLBOJCC_00243,NCFNLLIC_00243
+group_67,,hypothetical protein,KPLBOJCC_00195,NCFNLLIC_00195
+group_66,,hypothetical protein,KPLBOJCC_00181,NCFNLLIC_00181
+group_65,,hypothetical protein,KPLBOJCC_00089,NCFNLLIC_00089
+hcaB_1,hcaB_1,3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase,KPLBOJCC_00156,NCFNLLIC_00156
+group_64,,hypothetical protein,KPLBOJCC_00078,NCFNLLIC_00078
+mak,mak,Maltokinase,KPLBOJCC_00034,NCFNLLIC_00034
+gabD1,gabD1,Succinate-semialdehyde dehydrogenase [NADP(+)] 1,KPLBOJCC_00147,NCFNLLIC_00147
+group_63,,putative FAD-linked oxidoreductase,KPLBOJCC_00070,NCFNLLIC_00070
+group_62,,hypothetical protein,KPLBOJCC_00212,NCFNLLIC_00212
+mycP3,mycP3,Mycosin-3,KPLBOJCC_00207,NCFNLLIC_00207
+esxH,esxH,ESAT-6-like protein EsxH,KPLBOJCC_00204,NCFNLLIC_00204
+narK_2,narK_2,Nitrate/nitrite transporter NarK,KPLBOJCC_00180,NCFNLLIC_00180
+rpmB_1,rpmB_1,50S ribosomal protein L28,KPLBOJCC_00011,NCFNLLIC_00011
+group_61,,hypothetical protein,KPLBOJCC_00002,NCFNLLIC_00002
+group_60,,hypothetical protein,KPLBOJCC_00057,NCFNLLIC_00057
+esxG,esxG,ESAT-6-like protein EsxG,KPLBOJCC_00203,NCFNLLIC_00203
+ricR,ricR,Copper-sensing transcriptional repressor RicR,KPLBOJCC_00100,NCFNLLIC_00100
+narK_1,narK_1,Nitrate/nitrite transporter NarK,KPLBOJCC_00174,NCFNLLIC_00174
+PE3_1,PE3_1,PE family protein PE3,KPLBOJCC_00068,NCFNLLIC_00068
+group_59,,putative protein,KPLBOJCC_00164,NCFNLLIC_00164
+group_58,,Putative diacyglycerol O-acyltransferase,KPLBOJCC_00133,NCFNLLIC_00133
+group_57,,Toxin,KPLBOJCC_00215,NCFNLLIC_00215
+group_56,,hypothetical protein,KPLBOJCC_00102,NCFNLLIC_00102
+eccD3,eccD3,ESX-3 secretion system protein EccD3,KPLBOJCC_00206,NCFNLLIC_00206
+pntB,pntB,NAD(P) transhydrogenase subunit beta,KPLBOJCC_00065,NCFNLLIC_00065
+PE5_1,PE5_1,PE family immunomodulator PE5,KPLBOJCC_00201,NCFNLLIC_00201
+group_55,,hypothetical protein,KPLBOJCC_00252,NCFNLLIC_00252
+group_54,,hypothetical protein,KPLBOJCC_00148,NCFNLLIC_00148
+geoB,geoB,Geranial dehydrogenase,KPLBOJCC_00135,NCFNLLIC_00135
+group_53,,hypothetical protein,KPLBOJCC_00064,NCFNLLIC_00064
+nirD,nirD,Nitrite reductase (NADH) small subunit,KPLBOJCC_00167,NCFNLLIC_00167
+group_52,,hypothetical protein,KPLBOJCC_00059,NCFNLLIC_00059
+group_51,,hypothetical protein,KPLBOJCC_00122,NCFNLLIC_00122
+clcB,clcB,Voltage-gated ClC-type chloride channel ClcB,KPLBOJCC_00050,NCFNLLIC_00050
+cobQ_1,cobQ_1,Cobyric acid synthase,KPLBOJCC_00169,NCFNLLIC_00169
+group_50,,putative protein,KPLBOJCC_00001,NCFNLLIC_00001
+group_49,,hypothetical protein,KPLBOJCC_00015,NCFNLLIC_00015
+group_48,,hypothetical protein,KPLBOJCC_00030,NCFNLLIC_00030
+group_47,,hypothetical protein,KPLBOJCC_00187,NCFNLLIC_00187
+PE3_2,PE3_2,PE family protein PE3,KPLBOJCC_00069,NCFNLLIC_00069
+group_46,,hypothetical protein,KPLBOJCC_00010,NCFNLLIC_00010
+group_45,,Long-chain-fatty-acid--CoA ligase FadD13,KPLBOJCC_00126,NCFNLLIC_00126
+calB,calB,Coniferyl aldehyde dehydrogenase,KPLBOJCC_00054,NCFNLLIC_00054
+group_44,,putative protein,KPLBOJCC_00228,NCFNLLIC_00228
+PPE4_1,PPE4_1,PPE family protein PPE4,KPLBOJCC_00202,NCFNLLIC_00202
+group_43,,hypothetical protein,KPLBOJCC_00083,NCFNLLIC_00083
+group_42,,hypothetical protein,KPLBOJCC_00080,NCFNLLIC_00080
+group_41,,hypothetical protein,KPLBOJCC_00081,NCFNLLIC_00081
+group_40,,Putative fatty-acid--CoA ligase FadD10,KPLBOJCC_00005,NCFNLLIC_00005
+PPE3,PPE3,putative PPE family protein PPE3,KPLBOJCC_00196,NCFNLLIC_00196
+eccB3_1,eccB3_1,ESX-3 secretion system ATPase EccB3,KPLBOJCC_00199,NCFNLLIC_00199
+group_39,,Heme-binding protein,KPLBOJCC_00115,NCFNLLIC_00115
+group_38,,hypothetical protein,KPLBOJCC_00048,NCFNLLIC_00048
+sauT,sauT,putative sulfoacetate--CoA ligase,KPLBOJCC_00026,NCFNLLIC_00026
+group_37,,hypothetical protein,KPLBOJCC_00031,NCFNLLIC_00031
+group_36,,Ribonuclease VapC51,KPLBOJCC_00141,NCFNLLIC_00141
+group_35,,Long-chain-fatty-acid--CoA ligase FadD13,KPLBOJCC_00075,NCFNLLIC_00075
+PPE2,PPE2,putative PPE family protein PPE2,KPLBOJCC_00170,NCFNLLIC_00170
+lcfB_1,lcfB_1,Long-chain-fatty-acid--CoA ligase,KPLBOJCC_00183,NCFNLLIC_00183
+vapC2,vapC2,Ribonuclease VapC2,KPLBOJCC_00217,NCFNLLIC_00217
+group_34,,hypothetical protein,KPLBOJCC_00144,NCFNLLIC_00144
+group_33,,hypothetical protein,KPLBOJCC_00249,NCFNLLIC_00249
+ilvD,ilvD,Dihydroxy-acid dehydratase,KPLBOJCC_00099,NCFNLLIC_00099
+group_32,,hypothetical protein,KPLBOJCC_00138,NCFNLLIC_00138
+group_31,,hypothetical protein,KPLBOJCC_00213,NCFNLLIC_00213
+oxc,oxc,Oxalyl-CoA decarboxylase,KPLBOJCC_00025,NCFNLLIC_00025
+group_30,,Ribonuclease VapC25,KPLBOJCC_00191,NCFNLLIC_00191
+group_29,,hypothetical protein,KPLBOJCC_00058,NCFNLLIC_00058
+pckG,pckG,Phosphoenolpyruvate carboxykinase [GTP],KPLBOJCC_00123,NCFNLLIC_00123
+group_28,,hypothetical protein,KPLBOJCC_00098,NCFNLLIC_00098
+treS,treS,Trehalose synthase/amylase TreS,KPLBOJCC_00033,NCFNLLIC_00033
+group_27,,hypothetical protein,KPLBOJCC_00028,NCFNLLIC_00028
+group_26,,Butyryl-CoA dehydrogenase,KPLBOJCC_00158,NCFNLLIC_00158
+group_25,,hypothetical protein,KPLBOJCC_00104,NCFNLLIC_00104
+group_24,,Ribonuclease VapC24,KPLBOJCC_00154,NCFNLLIC_00154
+group_23,,hypothetical protein,KPLBOJCC_00073,NCFNLLIC_00073
+group_22,,hypothetical protein,KPLBOJCC_00242,NCFNLLIC_00242
+eccA3,eccA3,ESX-3 secretion system protein EccA3,KPLBOJCC_00198,NCFNLLIC_00198
+group_21,,hypothetical protein,KPLBOJCC_00171,NCFNLLIC_00171
+sdhA_1,sdhA_1,Succinate dehydrogenase flavoprotein subunit,KPLBOJCC_00162,NCFNLLIC_00162
+group_20,,putative protein,KPLBOJCC_00008,NCFNLLIC_00008
+group_19,,hypothetical protein,KPLBOJCC_00072,NCFNLLIC_00072
+group_18,,putative enoyl-CoA hydratase 1,KPLBOJCC_00037,NCFNLLIC_00037
+pepO,pepO,Neutral endopeptidase,KPLBOJCC_00110,NCFNLLIC_00110
+group_17,,hypothetical protein,KPLBOJCC_00017,NCFNLLIC_00017
+bglB,bglB,Thermostable beta-glucosidase B,KPLBOJCC_00095,NCFNLLIC_00095
+group_16,,hypothetical protein,KPLBOJCC_00165,NCFNLLIC_00165
+group_15,,Elongation factor G-like protein,KPLBOJCC_00027,NCFNLLIC_00027
+group_14,,hypothetical protein,KPLBOJCC_00222,NCFNLLIC_00222
+group_13,,Acyl-CoA dehydrogenase FadE34,KPLBOJCC_00184,NCFNLLIC_00184
+hsaB_1,hsaB_1,Flavin-dependent monooxygenase reductase subunit HsaB,KPLBOJCC_00159,NCFNLLIC_00159
+napA,napA,Nitrate reductase,KPLBOJCC_00109,NCFNLLIC_00109
+ctpB,ctpB,Cation-transporting P-type ATPase B,KPLBOJCC_00009,NCFNLLIC_00009
+baiE,baiE,Bile acid 7-alpha dehydratase,KPLBOJCC_00225,NCFNLLIC_00225
+group_12,,hypothetical protein,KPLBOJCC_00113,NCFNLLIC_00113
+group_11,,hypothetical protein,KPLBOJCC_00045,NCFNLLIC_00045
+nasD,nasD,Nitrite reductase [NAD(P)H],KPLBOJCC_00166,NCFNLLIC_00166
+group_10,,hypothetical protein,KPLBOJCC_00194,NCFNLLIC_00194
+group_9,,hypothetical protein,KPLBOJCC_00094,NCFNLLIC_00094
+group_8,,hypothetical protein,KPLBOJCC_00193,NCFNLLIC_00193
+cobU,cobU,Bifunctional adenosylcobalamin biosynthesis protein CobU,KPLBOJCC_00168,NCFNLLIC_00168
+group_7,,hypothetical protein,KPLBOJCC_00192,NCFNLLIC_00192
+mmpL3_1,mmpL3_1,Trehalose monomycolate exporter MmpL3,KPLBOJCC_00118,NCFNLLIC_00118
+group_6,,Heme uptake protein MmpL11,KPLBOJCC_00114,NCFNLLIC_00114
+aac,aac,Aminoglycoside 2'-N-acetyltransferase,KPLBOJCC_00175,NCFNLLIC_00175
+group_5,,Multidrug efflux ATP-binding/permease protein,KPLBOJCC_00106,NCFNLLIC_00106
+group_4,,hypothetical protein,KPLBOJCC_00179,NCFNLLIC_00179
+group_3,,hypothetical protein,KPLBOJCC_00131,NCFNLLIC_00131
+msrA,msrA,Peptide methionine sulfoxide reductase MsrA,KPLBOJCC_00044,NCFNLLIC_00044
+eccC3,eccC3,ESX-3 secretion system protein EccC3,KPLBOJCC_00200,NCFNLLIC_00200
+aftD,aftD,Alpha-(1->3)-arabinofuranosyltransferase,KPLBOJCC_00149,NCFNLLIC_00149
+group_2,,putative protein,KPLBOJCC_00004,NCFNLLIC_00004
+group_1,,hypothetical protein,KPLBOJCC_00086,NCFNLLIC_00086
+ctpI_1,ctpI_1,putative cation-transporting ATPase I,KPLBOJCC_00013,NCFNLLIC_00013
+dltA,dltA,D-alanine--poly(phosphoribitol) ligase subunit 1,KPLBOJCC_00007,NCFNLLIC_00007
+group_0,,hypothetical protein,KPLBOJCC_00220,NCFNLLIC_00220