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planemo upload for repository https://github.com/galaxyproject/tools-iuc commit 72ae2e05f35098c4cb6dd4f038bff07fd36917ed
author iuc
date Tue, 04 Apr 2023 17:23:19 +0000
parents 24e471d13fe9
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1n coverage estimates (Coverage of every haplotype; Don't confuse with genome coverage which is (ploidy * 1n coverage).)
* User defined 1n coverage:	
* Subset 1n coverage estimate:	24.6
* Highest peak 1n coverage estimate:	25
1n coverage used in smudgeplot (one of the three above):	25
* Proposed ploidy:	2
* Minimal number of heterozygous loci:	47
Note: This number is NOT an estimate of the total number heterozygous loci, it's merly setting the lower boundary if the inference of heterozygosity peaks is correct.
* Proportion of heterozygosity carried by pairs in different genome copies (table)
  genome_copies propotion_of_heterozygosity
1             2                           1
* Proportion of heterozygosity carried by paralogs:	0
* Summary of all detected peaks (table)
  peak kmers [#] kmers [proportion] summit B / (A + B) summit A + B
1   AB       973                  1               0.49        47.57