Mercurial > repos > galaxyp > cardinal_classification
annotate test-data/12_combined.imzml @ 17:8337ff96a54b draft
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit badc51fcd74ba0c14cd1ae64d5f524291fa11441"
author | galaxyp |
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date | Tue, 22 Feb 2022 20:41:41 +0000 |
parents | 24c000517173 |
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rev | line source |
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5
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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1 <?xml version="1.0"?> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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2 <mzML version="1.1" xmlns="http://psi.hupo.org/ms/mzml" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://psi.hupo.org/ms/mzml http://psidev.info/files/ms/mzML/xsd/mzML1.1.0_idx.xsd"> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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3 <cvList count="3"> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
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4 <cv id="MS" fullName="Proteomics Standards Initiative Mass Spectrometry Ontology" version="1.3.1" URI="http://psidev.info/ms/mzML/psi-ms.obo" /> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
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5 <cv id="UO" fullName="Unit Ontology" version="1.15" URI="http://obo.cvs.sourceforge.net/obo/obo/ontology/phenotype/unit.obo" /> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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6 <cv id="IMS" fullName="Imaging MS Ontology" version="0.9.1" URI="http://www.maldi-msi.org/download/imzml/imagingMS.obo" /> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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7 </cvList> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
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8 <fileDescription> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
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9 <fileContent> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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10 <cvParam cvRef="MS" accession="MS:1000579" name="MS1 spectrum" value="" /> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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11 <cvParam cvRef="MS" accession="MS:1000128" name="profile spectrum" value="" /> |
9
24c000517173
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 6e8b69ee3aff3c93f745a5de11cc9169130f2e5e"
galaxyp
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7
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12 <cvParam cvRef="IMS" accession="IMS:1000080" name="universally unique identifier" value="85ec7820-8e87-4fb2-b74a-5b9cd8cf24d6" /> |
24c000517173
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 6e8b69ee3aff3c93f745a5de11cc9169130f2e5e"
galaxyp
parents:
7
diff
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13 <cvParam cvRef="IMS" accession="IMS:1000091" name="ibd SHA-1" value="d8a4e14091441873e8969f3b6b249f55b4d95146" /> |
5
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
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14 <cvParam cvRef="IMS" accession="IMS:1000030" name="continuous" value="" /> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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15 </fileContent> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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16 </fileDescription> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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17 <referenceableParamGroupList count="4"> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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18 <referenceableParamGroup id="spectrum1"> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
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19 <cvParam cvRef="MS" accession="MS:1000579" name="MS1 spectrum" value="" /> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
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20 <cvParam cvRef="MS" accession="MS:1000511" name="ms level" value="0" /> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
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21 <cvParam cvRef="MS" accession="MS:1000128" name="profile spectrum" value="" /> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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22 </referenceableParamGroup> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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23 <referenceableParamGroup id="scan1"> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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24 <cvParam cvRef="MS" accession="MS:1000093" name="increasing m/z scan" value="" /> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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25 </referenceableParamGroup> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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26 <referenceableParamGroup id="mzArray"> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
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27 <cvParam cvRef="MS" accession="MS:1000576" name="no compression" value="" /> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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28 <cvParam cvRef="MS" accession="MS:1000514" name="m/z array" value="" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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29 <cvParam cvRef="IMS" accession="IMS:1000101" name="external data" value="true" /> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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30 <cvParam cvRef="MS" accession="MS:1000521" name="32-bit float" value="" /> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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31 </referenceableParamGroup> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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32 <referenceableParamGroup id="intensityArray"> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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33 <cvParam cvRef="MS" accession="MS:1000576" name="no compression" value="" /> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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34 <cvParam cvRef="MS" accession="MS:1000515" name="intensity array" value="" unitCvRef="MS" unitAccession="MS:1000131" unitName="number of counts" /> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
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35 <cvParam cvRef="IMS" accession="IMS:1000101" name="external data" value="true" /> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
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36 <cvParam cvRef="MS" accession="MS:1000521" name="32-bit float" value="" /> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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37 </referenceableParamGroup> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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38 </referenceableParamGroupList> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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39 <sampleList count="1"> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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40 <sample id="sample1" name="Sample1"> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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41 <cvParam cvRef="MS" accession="MS:1000001" name="sample number" value="1" /> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
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42 </sample> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
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43 </sampleList> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
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44 <softwareList count="1"> |
9
24c000517173
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 6e8b69ee3aff3c93f745a5de11cc9169130f2e5e"
galaxyp
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7
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45 <software id="Cardinal" version="2.6.0"> |
5
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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46 <cvParam cvRef="MS" accession="MS:1000799" name="custom unreleased software tool" value="" /> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
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47 </software> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
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48 </softwareList> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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49 <scanSettingsList count="1"> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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50 <scanSettings id="scansettings1"> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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51 <cvParam cvRef="IMS" accession="IMS:1000042" name="max count of pixel x" value="3" /> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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52 <cvParam cvRef="IMS" accession="IMS:1000043" name="max count of pixel y" value="3" /> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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53 <cvParam cvRef="IMS" accession="IMS:1000044" name="max dimension x" value="8" /> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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54 <cvParam cvRef="IMS" accession="IMS:1000045" name="max dimension y" value="3" /> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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55 <cvParam cvRef="IMS" accession="IMS:1000046" name="pixel size x" value="1.000000" /> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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56 <cvParam cvRef="IMS" accession="IMS:1000047" name="pixel size y" value="1.000000" /> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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57 </scanSettings> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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58 </scanSettingsList> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
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59 <instrumentConfigurationList count="1"> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
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60 <instrumentConfiguration id="IC1"> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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61 <cvParam cvRef="MS" accession="MS:1000031" name="instrument model" /> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
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62 </instrumentConfiguration> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
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63 </instrumentConfigurationList> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
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64 <dataProcessingList count="1"> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
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65 <dataProcessing id="CardinalWriteImzML"> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
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66 <processingMethod order="1" softwareRef="Cardinal"> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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67 <cvParam cvRef="MS" accession="MS:1000544" name="Conversion to mzML" value="" /> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
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68 </processingMethod> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
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69 </dataProcessing> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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70 </dataProcessingList> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
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71 <run defaultInstrumentConfigurationRef="IC1" id="Experiment01" sampleRef="sample1"> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
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72 <spectrumList count="9" defaultDataProcessingRef="CardinalWriteImzML"> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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73 <spectrum id="Spectrum=1" defaultArrayLength="0" index="1"> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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74 <referenceableParamGroupRef ref="spectrum1" /> |
42f6e30b00f2
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galaxyp
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diff
changeset
|
75 <scanList count="1"> |
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diff
changeset
|
76 <cvParam cvRef="MS" accession="MS:1000795" name="no combination" value="" /> |
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galaxyp
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diff
changeset
|
77 <scan instrumentConfigurationRef="IC1"> |
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galaxyp
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diff
changeset
|
78 <referenceableParamGroupRef ref="scan1" /> |
42f6e30b00f2
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galaxyp
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diff
changeset
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79 <cvParam cvRef="IMS" accession="IMS:1000050" name="position x" value="1" /> |
42f6e30b00f2
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diff
changeset
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80 <cvParam cvRef="IMS" accession="IMS:1000051" name="position y" value="1" /> |
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6f4c34f8d5ba
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diff
changeset
|
81 <userParam name="3DPositionX" value="1.000000" /> |
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changeset
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82 <userParam name="3DPositionY" value="1.000000" /> |
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42f6e30b00f2
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galaxyp
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diff
changeset
|
83 </scan> |
42f6e30b00f2
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galaxyp
parents:
diff
changeset
|
84 </scanList> |
42f6e30b00f2
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galaxyp
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diff
changeset
|
85 <binaryDataArrayList count="2"> |
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changeset
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86 <binaryDataArray encodedLength="0"> |
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diff
changeset
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87 <referenceableParamGroupRef ref="mzArray" /> |
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diff
changeset
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88 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="16" /> |
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diff
changeset
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89 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="8399" /> |
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diff
changeset
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changeset
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91 <binary /> |
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changeset
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92 </binaryDataArray> |
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changeset
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93 <binaryDataArray encodedLength="0"> |
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94 <referenceableParamGroupRef ref="intensityArray" /> |
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changeset
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42f6e30b00f2
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changeset
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changeset
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changeset
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98 <binary /> |
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galaxyp
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changeset
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99 </binaryDataArray> |
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changeset
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100 </binaryDataArrayList> |
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changeset
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101 </spectrum> |
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changeset
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102 <spectrum id="Spectrum=2" defaultArrayLength="0" index="2"> |
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galaxyp
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changeset
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103 <referenceableParamGroupRef ref="spectrum1" /> |
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galaxyp
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changeset
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changeset
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changeset
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galaxyp
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changeset
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107 <referenceableParamGroupRef ref="scan1" /> |
42f6e30b00f2
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changeset
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changeset
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changeset
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changeset
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galaxyp
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changeset
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112 </scan> |
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galaxyp
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diff
changeset
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113 </scanList> |
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galaxyp
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changeset
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changeset
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changeset
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changeset
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changeset
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changeset
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changeset
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changeset
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changeset
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changeset
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changeset
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changeset
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changeset
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changeset
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changeset
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changeset
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130 </spectrum> |
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changeset
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changeset
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changeset
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changeset
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changeset
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changeset
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136 <referenceableParamGroupRef ref="scan1" /> |
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changeset
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changeset
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galaxyp
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changeset
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141 </scan> |
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galaxyp
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changeset
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142 </scanList> |
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galaxyp
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changeset
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changeset
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changeset
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changeset
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changeset
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changeset
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galaxyp
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changeset
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galaxyp
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changeset
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changeset
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galaxyp
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153 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="100804" /> |
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changeset
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changeset
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changeset
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158 </binaryDataArrayList> |
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159 </spectrum> |
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diff
changeset
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161 <referenceableParamGroupRef ref="spectrum1" /> |
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changeset
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changeset
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164 <scan instrumentConfigurationRef="IC1"> |
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165 <referenceableParamGroupRef ref="scan1" /> |
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changeset
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changeset
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42f6e30b00f2
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galaxyp
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changeset
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170 </scan> |
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galaxyp
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diff
changeset
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171 </scanList> |
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changeset
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changeset
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changeset
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changeset
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changeset
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changeset
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changeset
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changeset
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changeset
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changeset
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changeset
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changeset
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changeset
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changeset
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galaxyp
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changeset
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galaxyp
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changeset
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galaxyp
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changeset
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changeset
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changeset
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changeset
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changeset
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changeset
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changeset
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changeset
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changeset
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galaxyp
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changeset
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changeset
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changeset
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changeset
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changeset
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changeset
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changeset
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changeset
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galaxyp
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changeset
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galaxyp
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changeset
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229 </scanList> |
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galaxyp
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changeset
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|
308 <cvParam cvRef="MS" accession="MS:1000795" name="no combination" value="" /> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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309 <scan instrumentConfigurationRef="IC1"> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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310 <referenceableParamGroupRef ref="scan1" /> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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311 <cvParam cvRef="IMS" accession="IMS:1000050" name="position x" value="8" /> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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312 <cvParam cvRef="IMS" accession="IMS:1000051" name="position y" value="3" /> |
7
6f4c34f8d5ba
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f986c51abe33c7f622d429a3c4a79ee24b33c1f3"
galaxyp
parents:
5
diff
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313 <userParam name="3DPositionX" value="8.000000" /> |
6f4c34f8d5ba
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f986c51abe33c7f622d429a3c4a79ee24b33c1f3"
galaxyp
parents:
5
diff
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314 <userParam name="3DPositionY" value="3.000000" /> |
5
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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315 </scan> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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316 </scanList> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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317 <binaryDataArrayList count="2"> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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318 <binaryDataArray encodedLength="0"> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
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319 <referenceableParamGroupRef ref="mzArray" /> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
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320 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="16" /> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
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321 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="8399" /> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
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322 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="33596" /> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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323 <binary /> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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324 </binaryDataArray> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
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325 <binaryDataArray encodedLength="0"> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
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326 <referenceableParamGroupRef ref="intensityArray" /> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
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327 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="302380" /> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
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328 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="8399" /> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
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329 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="33596" /> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
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330 <binary /> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
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331 </binaryDataArray> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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332 </binaryDataArrayList> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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333 </spectrum> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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334 </spectrumList> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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335 </run> |
42f6e30b00f2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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336 </mzML> |