Mercurial > repos > galaxyp > cardinal_classification
changeset 16:eddc2ae2db80 draft
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit c8d3adac445b4e08e2724e22d7201bfc38bbf40f"
| author | galaxyp |
|---|---|
| date | Sun, 29 Aug 2021 07:26:30 +0000 |
| parents | f28ad96b76dc |
| children | 8337ff96a54b |
| files | classification.xml macros.xml test-data/QC_imzml_shortreport.pdf test-data/preprocessing_results4.ibd test-data/preprocessing_results4.imzml test-data/preprocessing_results4.imzml.txt test-data/preprocessing_results4.pdf |
| diffstat | 7 files changed, 8 insertions(+), 8 deletions(-) [+] |
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--- a/classification.xml Mon Jun 21 07:35:58 2021 +0000 +++ b/classification.xml Sun Aug 29 07:26:30 2021 +0000 @@ -1,11 +1,11 @@ -<tool id="cardinal_classification" name="MSI classification" version="@VERSION@.2"> +<tool id="cardinal_classification" name="MSI classification" version="@VERSION@.0"> <description>spatial classification of mass spectrometry imaging data</description> <macros> <import>macros.xml</import> </macros> <expand macro="requirements"> <requirement type="package" version="2.3">r-gridextra</requirement> - <requirement type="package" version="3.3.2">r-ggplot2</requirement> + <requirement type="package" version="3.3.5">r-ggplot2</requirement> </expand> <command detect_errors="exit_code"> <![CDATA[
--- a/macros.xml Mon Jun 21 07:35:58 2021 +0000 +++ b/macros.xml Sun Aug 29 07:26:30 2021 +0000 @@ -1,5 +1,5 @@ <macros> - <token name="@VERSION@">2.6.0</token> + <token name="@VERSION@">2.10.0</token> <xml name="requirements"> <requirements>
--- a/test-data/preprocessing_results4.imzml Mon Jun 21 07:35:58 2021 +0000 +++ b/test-data/preprocessing_results4.imzml Sun Aug 29 07:26:30 2021 +0000 @@ -9,8 +9,8 @@ <fileContent> <cvParam cvRef="MS" accession="MS:1000579" name="MS1 spectrum" value="" /> <cvParam cvRef="MS" accession="MS:1000128" name="profile spectrum" value="" /> - <cvParam cvRef="IMS" accession="IMS:1000080" name="universally unique identifier" value="48842eaf-40e5-4a3f-831c-2d7a3b7e04b9" /> - <cvParam cvRef="IMS" accession="IMS:1000091" name="ibd SHA-1" value="2010ba5b7d44695d891cfe3b6674a5699fa610c0" /> + <cvParam cvRef="IMS" accession="IMS:1000080" name="universally unique identifier" value="04431b64-9f3d-44b4-9e63-81b9e4924aec" /> + <cvParam cvRef="IMS" accession="IMS:1000091" name="ibd SHA-1" value="38a4fadd32374bdf0e4b2bb7d976f6067d542a29" /> <cvParam cvRef="IMS" accession="IMS:1000030" name="continuous" value="" /> </fileContent> </fileDescription> @@ -42,7 +42,7 @@ </sample> </sampleList> <softwareList count="1"> - <software id="Cardinal" version="2.6.0"> + <software id="Cardinal" version="2.10.0"> <cvParam cvRef="MS" accession="MS:1000799" name="custom unreleased software tool" value="" /> </software> </softwareList>
--- a/test-data/preprocessing_results4.imzml.txt Mon Jun 21 07:35:58 2021 +0000 +++ b/test-data/preprocessing_results4.imzml.txt Sun Aug 29 07:26:30 2021 +0000 @@ -1,4 +1,4 @@ imzML file: total 84 --rw-rw-r-- 1 meli meli 62696 Oct 5 19:58 ibd --rw-rw-r-- 1 meli meli 18199 Oct 5 19:58 imzml +-rw-rw-r-- 1 meli meli 62696 Aug 28 16:41 ibd +-rw-rw-r-- 1 meli meli 18200 Aug 28 16:41 imzml