diff test-data/ComBat_results_Example_processed_file.imzml @ 20:a9a28e46d54a draft default tip

planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 91e77c139cb3b7c6d67727dc39140dd79355fa0c
author galaxyp
date Thu, 04 Jul 2024 13:47:49 +0000
parents bf06d196e23d
children
line wrap: on
line diff
--- a/test-data/ComBat_results_Example_processed_file.imzml	Wed Apr 19 22:37:46 2023 +0000
+++ b/test-data/ComBat_results_Example_processed_file.imzml	Thu Jul 04 13:47:49 2024 +0000
@@ -9,8 +9,8 @@
 		<fileContent>
 			<cvParam cvRef="MS" accession="MS:1000579" name="MS1 spectrum" value="" />
 			<cvParam cvRef="MS" accession="MS:1000128" name="profile spectrum" value="" />
-			<cvParam cvRef="IMS" accession="IMS:1000080" name="universally unique identifier" value="82e7db90-df72-41f8-9ca7-7a19e966d5c1" />
-			<cvParam cvRef="IMS" accession="IMS:1000091" name="ibd SHA-1" value="259aa4b90129abb2f1f3107cf123f28d7c744f0c" />
+			<cvParam cvRef="IMS" accession="IMS:1000080" name="universally unique identifier" value="bff0e5f4-5dea-4fc8-90c4-dd30b8464a7a" />
+			<cvParam cvRef="IMS" accession="IMS:1000091" name="ibd SHA-1" value="964c9332a0878edc5a2fc6420627334a9a43d442" />
 			<cvParam cvRef="IMS" accession="IMS:1000030" name="continuous" value="" />
 		</fileContent>
 	</fileDescription>
@@ -42,16 +42,12 @@
 		</sample>
 	</sampleList>
 	<softwareList count="1">
-		<software id="Cardinal" version="2.10.0">
+		<software id="Cardinal" version="3.4.3">
 			<cvParam cvRef="MS" accession="MS:1000799" name="custom unreleased software tool" value="" />
 		</software>
 	</softwareList>
 	<scanSettingsList count="1">
 		<scanSettings id="scansettings1">
-			<cvParam cvRef="IMS" accession="IMS:1000401" name="top down" value="" />
-			<cvParam cvRef="IMS" accession="IMS:1000413" name="flyback" value="" />
-			<cvParam cvRef="IMS" accession="IMS:1000480" name="horizontal line scan" value="" />
-			<cvParam cvRef="IMS" accession="IMS:1000491" name="linescan left right" value="" />
 			<cvParam cvRef="IMS" accession="IMS:1000042" name="max count of pixel x" value="3" />
 			<cvParam cvRef="IMS" accession="IMS:1000043" name="max count of pixel y" value="3" />
 			<cvParam cvRef="IMS" accession="IMS:1000044" name="max dimension x" value="3" />
@@ -90,15 +86,15 @@
 					<binaryDataArray encodedLength="0">
 						<referenceableParamGroupRef ref="mzArray" />
 						<cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="16" />
-						<cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="41589" />
-						<cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="166356" />
+						<cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="10398" />
+						<cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="41592" />
 						<binary />
 					</binaryDataArray>
 					<binaryDataArray encodedLength="0">
 						<referenceableParamGroupRef ref="intensityArray" />
-						<cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="166372" />
-						<cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="41589" />
-						<cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="166356" />
+						<cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="41608" />
+						<cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="10398" />
+						<cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="41592" />
 						<binary />
 					</binaryDataArray>
 				</binaryDataArrayList>
@@ -119,15 +115,15 @@
 					<binaryDataArray encodedLength="0">
 						<referenceableParamGroupRef ref="mzArray" />
 						<cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="16" />
-						<cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="41589" />
-						<cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="166356" />
+						<cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="10398" />
+						<cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="41592" />
 						<binary />
 					</binaryDataArray>
 					<binaryDataArray encodedLength="0">
 						<referenceableParamGroupRef ref="intensityArray" />
-						<cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="332728" />
-						<cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="41589" />
-						<cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="166356" />
+						<cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="83200" />
+						<cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="10398" />
+						<cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="41592" />
 						<binary />
 					</binaryDataArray>
 				</binaryDataArrayList>
@@ -148,15 +144,15 @@
 					<binaryDataArray encodedLength="0">
 						<referenceableParamGroupRef ref="mzArray" />
 						<cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="16" />
-						<cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="41589" />
-						<cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="166356" />
+						<cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="10398" />
+						<cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="41592" />
 						<binary />
 					</binaryDataArray>
 					<binaryDataArray encodedLength="0">
 						<referenceableParamGroupRef ref="intensityArray" />
-						<cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="499084" />
-						<cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="41589" />
-						<cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="166356" />
+						<cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="124792" />
+						<cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="10398" />
+						<cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="41592" />
 						<binary />
 					</binaryDataArray>
 				</binaryDataArrayList>
@@ -177,15 +173,15 @@
 					<binaryDataArray encodedLength="0">
 						<referenceableParamGroupRef ref="mzArray" />
 						<cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="16" />
-						<cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="41589" />
-						<cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="166356" />
+						<cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="10398" />
+						<cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="41592" />
 						<binary />
 					</binaryDataArray>
 					<binaryDataArray encodedLength="0">
 						<referenceableParamGroupRef ref="intensityArray" />
-						<cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="665440" />
-						<cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="41589" />
-						<cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="166356" />
+						<cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="166384" />
+						<cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="10398" />
+						<cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="41592" />
 						<binary />
 					</binaryDataArray>
 				</binaryDataArrayList>
@@ -206,15 +202,15 @@
 					<binaryDataArray encodedLength="0">
 						<referenceableParamGroupRef ref="mzArray" />
 						<cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="16" />
-						<cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="41589" />
-						<cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="166356" />
+						<cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="10398" />
+						<cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="41592" />
 						<binary />
 					</binaryDataArray>
 					<binaryDataArray encodedLength="0">
 						<referenceableParamGroupRef ref="intensityArray" />
-						<cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="831796" />
-						<cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="41589" />
-						<cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="166356" />
+						<cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="207976" />
+						<cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="10398" />
+						<cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="41592" />
 						<binary />
 					</binaryDataArray>
 				</binaryDataArrayList>
@@ -235,15 +231,15 @@
 					<binaryDataArray encodedLength="0">
 						<referenceableParamGroupRef ref="mzArray" />
 						<cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="16" />
-						<cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="41589" />
-						<cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="166356" />
+						<cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="10398" />
+						<cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="41592" />
 						<binary />
 					</binaryDataArray>
 					<binaryDataArray encodedLength="0">
 						<referenceableParamGroupRef ref="intensityArray" />
-						<cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="998152" />
-						<cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="41589" />
-						<cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="166356" />
+						<cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="249568" />
+						<cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="10398" />
+						<cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="41592" />
 						<binary />
 					</binaryDataArray>
 				</binaryDataArrayList>
@@ -264,15 +260,15 @@
 					<binaryDataArray encodedLength="0">
 						<referenceableParamGroupRef ref="mzArray" />
 						<cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="16" />
-						<cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="41589" />
-						<cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="166356" />
+						<cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="10398" />
+						<cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="41592" />
 						<binary />
 					</binaryDataArray>
 					<binaryDataArray encodedLength="0">
 						<referenceableParamGroupRef ref="intensityArray" />
-						<cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="1164508" />
-						<cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="41589" />
-						<cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="166356" />
+						<cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="291160" />
+						<cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="10398" />
+						<cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="41592" />
 						<binary />
 					</binaryDataArray>
 				</binaryDataArrayList>
@@ -293,15 +289,15 @@
 					<binaryDataArray encodedLength="0">
 						<referenceableParamGroupRef ref="mzArray" />
 						<cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="16" />
-						<cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="41589" />
-						<cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="166356" />
+						<cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="10398" />
+						<cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="41592" />
 						<binary />
 					</binaryDataArray>
 					<binaryDataArray encodedLength="0">
 						<referenceableParamGroupRef ref="intensityArray" />
-						<cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="1330864" />
-						<cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="41589" />
-						<cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="166356" />
+						<cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="332752" />
+						<cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="10398" />
+						<cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="41592" />
 						<binary />
 					</binaryDataArray>
 				</binaryDataArrayList>
@@ -322,15 +318,15 @@
 					<binaryDataArray encodedLength="0">
 						<referenceableParamGroupRef ref="mzArray" />
 						<cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="16" />
-						<cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="41589" />
-						<cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="166356" />
+						<cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="10398" />
+						<cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="41592" />
 						<binary />
 					</binaryDataArray>
 					<binaryDataArray encodedLength="0">
 						<referenceableParamGroupRef ref="intensityArray" />
-						<cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="1497220" />
-						<cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="41589" />
-						<cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="166356" />
+						<cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="374344" />
+						<cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="10398" />
+						<cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="41592" />
 						<binary />
 					</binaryDataArray>
 				</binaryDataArrayList>