Mercurial > repos > galaxyp > cardinal_mz_images
annotate test-data/out8.imzml @ 8:a69865da6f80 draft
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit d008f6ea0f5c8435fb975a34cb99ea4d42c5ebd2"
author | galaxyp |
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date | Wed, 13 May 2020 14:27:51 -0400 |
parents | 25b83cbd596a |
children | 08ebd8da780c |
rev | line source |
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6
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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1 <?xml version="1.0"?> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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2 <mzML version="1.1" xmlns="http://psi.hupo.org/ms/mzml" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://psi.hupo.org/ms/mzml http://psidev.info/files/ms/mzML/xsd/mzML1.1.0_idx.xsd"> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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3 <cvList count="3"> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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4 <cv id="MS" fullName="Proteomics Standards Initiative Mass Spectrometry Ontology" version="1.3.1" URI="http://psidev.info/ms/mzML/psi-ms.obo" /> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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5 <cv id="UO" fullName="Unit Ontology" version="1.15" URI="http://obo.cvs.sourceforge.net/obo/obo/ontology/phenotype/unit.obo" /> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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6 <cv id="IMS" fullName="Imaging MS Ontology" version="0.9.1" URI="http://www.maldi-msi.org/download/imzml/imagingMS.obo" /> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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7 </cvList> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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8 <fileDescription> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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9 <fileContent> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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10 <cvParam cvRef="MS" accession="MS:1000579" name="MS1 spectrum" value="" /> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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11 <cvParam cvRef="MS" accession="MS:1000128" name="profile spectrum" value="" /> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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12 <cvParam cvRef="IMS" accession="IMS:1000080" name="universally unique identifier" value="ace74b18-25e2-4722-89f4-6eedc2b62ed8" /> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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13 <cvParam cvRef="IMS" accession="IMS:1000091" name="ibd SHA-1" value="41d580d8acf3e67df8b63f001fe941da7334861b" /> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
diff
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14 <cvParam cvRef="IMS" accession="IMS:1000031" name="processed" value="" /> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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15 </fileContent> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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16 </fileDescription> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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17 <referenceableParamGroupList count="4"> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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18 <referenceableParamGroup id="spectrum1"> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
diff
changeset
|
19 <cvParam cvRef="MS" accession="MS:1000579" name="MS1 spectrum" value="" /> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
diff
changeset
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20 <cvParam cvRef="MS" accession="MS:1000511" name="ms level" value="0" /> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
diff
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21 <cvParam cvRef="MS" accession="MS:1000128" name="profile spectrum" value="" /> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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22 </referenceableParamGroup> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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23 <referenceableParamGroup id="scan1"> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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24 <cvParam cvRef="MS" accession="MS:1000093" name="increasing m/z scan" value="" /> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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25 </referenceableParamGroup> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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26 <referenceableParamGroup id="mzArray"> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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27 <cvParam cvRef="MS" accession="MS:1000576" name="no compression" value="" /> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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28 <cvParam cvRef="MS" accession="MS:1000514" name="m/z array" value="" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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29 <cvParam cvRef="IMS" accession="IMS:1000101" name="external data" value="true" /> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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30 <cvParam cvRef="MS" accession="MS:1000521" name="32-bit float" value="" /> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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31 </referenceableParamGroup> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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32 <referenceableParamGroup id="intensityArray"> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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33 <cvParam cvRef="MS" accession="MS:1000576" name="no compression" value="" /> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
diff
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34 <cvParam cvRef="MS" accession="MS:1000515" name="intensity array" value="" unitCvRef="MS" unitAccession="MS:1000131" unitName="number of counts" /> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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35 <cvParam cvRef="IMS" accession="IMS:1000101" name="external data" value="true" /> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
diff
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36 <cvParam cvRef="MS" accession="MS:1000521" name="32-bit float" value="" /> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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37 </referenceableParamGroup> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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38 </referenceableParamGroupList> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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39 <sampleList count="1"> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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40 <sample id="sample1" name="Sample1"> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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41 <cvParam cvRef="MS" accession="MS:1000001" name="sample number" value="1" /> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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42 </sample> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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43 </sampleList> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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44 <softwareList count="1"> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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45 <software id="Cardinal" version="2.4.0"> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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46 <cvParam cvRef="MS" accession="MS:1000799" name="custom unreleased software tool" value="" /> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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47 </software> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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48 </softwareList> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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49 <scanSettingsList count="1"> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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50 <scanSettings id="scansettings1"> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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51 <cvParam cvRef="IMS" accession="IMS:1000401" name="top down" value="" /> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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52 <cvParam cvRef="IMS" accession="IMS:1000413" name="flyback" value="" /> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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53 <cvParam cvRef="IMS" accession="IMS:1000480" name="horizontal line scan" value="" /> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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54 <cvParam cvRef="IMS" accession="IMS:1000491" name="linescan left right" value="" /> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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55 <cvParam cvRef="IMS" accession="IMS:1000042" name="max count of pixel x" value="2" /> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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56 <cvParam cvRef="IMS" accession="IMS:1000043" name="max count of pixel y" value="3" /> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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57 <cvParam cvRef="IMS" accession="IMS:1000044" name="max dimension x" value="3" /> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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58 <cvParam cvRef="IMS" accession="IMS:1000045" name="max dimension y" value="3" /> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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59 <cvParam cvRef="IMS" accession="IMS:1000046" name="pixel size x" value="2.000000" /> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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60 <cvParam cvRef="IMS" accession="IMS:1000047" name="pixel size y" value="1.000000" /> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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61 </scanSettings> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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62 </scanSettingsList> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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63 <instrumentConfigurationList count="1"> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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64 <instrumentConfiguration id="IC1"> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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65 <cvParam cvRef="MS" accession="MS:1000031" name="instrument model" /> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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66 </instrumentConfiguration> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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67 </instrumentConfigurationList> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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68 <dataProcessingList count="1"> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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69 <dataProcessing id="CardinalWriteImzML"> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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70 <processingMethod order="1" softwareRef="Cardinal"> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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71 <cvParam cvRef="MS" accession="MS:1000544" name="Conversion to mzML" value="" /> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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72 </processingMethod> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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73 </dataProcessing> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
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74 </dataProcessingList> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
diff
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|
75 <run defaultInstrumentConfigurationRef="IC1" id="Experiment01" sampleRef="sample1"> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
diff
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|
76 <spectrumList count="5" defaultDataProcessingRef="CardinalWriteImzML"> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
diff
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|
77 <spectrum id="Spectrum=1" defaultArrayLength="0" index="1"> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
diff
changeset
|
78 <referenceableParamGroupRef ref="spectrum1" /> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
diff
changeset
|
79 <scanList count="1"> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
diff
changeset
|
80 <cvParam cvRef="MS" accession="MS:1000795" name="no combination" value="" /> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
diff
changeset
|
81 <scan instrumentConfigurationRef="IC1"> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
diff
changeset
|
82 <referenceableParamGroupRef ref="scan1" /> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
diff
changeset
|
83 <cvParam cvRef="IMS" accession="IMS:1000050" name="position x" value="1" /> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
diff
changeset
|
84 <cvParam cvRef="IMS" accession="IMS:1000051" name="position y" value="1" /> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
diff
changeset
|
85 <userParam name="3DPositionX" value="1.000000" /> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
diff
changeset
|
86 <userParam name="3DPositionY" value="1.000000" /> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
diff
changeset
|
87 </scan> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
diff
changeset
|
88 </scanList> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
diff
changeset
|
89 <binaryDataArrayList count="2"> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
diff
changeset
|
90 <binaryDataArray encodedLength="0"> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
diff
changeset
|
91 <referenceableParamGroupRef ref="mzArray" /> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
diff
changeset
|
92 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="16" /> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
diff
changeset
|
93 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="8399" /> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
diff
changeset
|
94 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="33596" /> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
diff
changeset
|
95 <binary /> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
diff
changeset
|
96 </binaryDataArray> |
25b83cbd596a
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galaxyp
parents:
diff
changeset
|
97 <binaryDataArray encodedLength="0"> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
diff
changeset
|
98 <referenceableParamGroupRef ref="intensityArray" /> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
diff
changeset
|
99 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="33612" /> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
diff
changeset
|
100 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="8399" /> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
diff
changeset
|
101 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="33596" /> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
diff
changeset
|
102 <binary /> |
25b83cbd596a
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galaxyp
parents:
diff
changeset
|
103 </binaryDataArray> |
25b83cbd596a
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galaxyp
parents:
diff
changeset
|
104 </binaryDataArrayList> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
diff
changeset
|
105 </spectrum> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
diff
changeset
|
106 <spectrum id="Spectrum=2" defaultArrayLength="0" index="2"> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
diff
changeset
|
107 <referenceableParamGroupRef ref="spectrum1" /> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
diff
changeset
|
108 <scanList count="1"> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
diff
changeset
|
109 <cvParam cvRef="MS" accession="MS:1000795" name="no combination" value="" /> |
25b83cbd596a
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galaxyp
parents:
diff
changeset
|
110 <scan instrumentConfigurationRef="IC1"> |
25b83cbd596a
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galaxyp
parents:
diff
changeset
|
111 <referenceableParamGroupRef ref="scan1" /> |
25b83cbd596a
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galaxyp
parents:
diff
changeset
|
112 <cvParam cvRef="IMS" accession="IMS:1000050" name="position x" value="3" /> |
25b83cbd596a
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galaxyp
parents:
diff
changeset
|
113 <cvParam cvRef="IMS" accession="IMS:1000051" name="position y" value="1" /> |
25b83cbd596a
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galaxyp
parents:
diff
changeset
|
114 <userParam name="3DPositionX" value="3.000000" /> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
diff
changeset
|
115 <userParam name="3DPositionY" value="1.000000" /> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
diff
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|
116 </scan> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
diff
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|
117 </scanList> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
diff
changeset
|
118 <binaryDataArrayList count="2"> |
25b83cbd596a
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
galaxyp
parents:
diff
changeset
|
119 <binaryDataArray encodedLength="0"> |
25b83cbd596a
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galaxyp
parents:
diff
changeset
|
120 <referenceableParamGroupRef ref="mzArray" /> |
25b83cbd596a
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galaxyp
parents:
diff
changeset
|
121 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="67208" /> |
25b83cbd596a
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galaxyp
parents:
diff
changeset
|
122 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="8399" /> |
25b83cbd596a
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galaxyp
parents:
diff
changeset
|
123 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="33596" /> |
25b83cbd596a
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galaxyp
parents:
diff
changeset
|
124 <binary /> |
25b83cbd596a
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galaxyp
parents:
diff
changeset
|
125 </binaryDataArray> |
25b83cbd596a
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galaxyp
parents:
diff
changeset
|
126 <binaryDataArray encodedLength="0"> |
25b83cbd596a
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galaxyp
parents:
diff
changeset
|
127 <referenceableParamGroupRef ref="intensityArray" /> |
25b83cbd596a
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galaxyp
parents:
diff
changeset
|
128 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="100804" /> |
25b83cbd596a
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galaxyp
parents:
diff
changeset
|
129 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="8399" /> |
25b83cbd596a
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galaxyp
parents:
diff
changeset
|
130 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="33596" /> |
25b83cbd596a
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galaxyp
parents:
diff
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|
131 <binary /> |
25b83cbd596a
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galaxyp
parents:
diff
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132 </binaryDataArray> |
25b83cbd596a
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galaxyp
parents:
diff
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133 </binaryDataArrayList> |
25b83cbd596a
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galaxyp
parents:
diff
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|
134 </spectrum> |
25b83cbd596a
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galaxyp
parents:
diff
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|
135 <spectrum id="Spectrum=3" defaultArrayLength="0" index="3"> |
25b83cbd596a
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galaxyp
parents:
diff
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|
136 <referenceableParamGroupRef ref="spectrum1" /> |
25b83cbd596a
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galaxyp
parents:
diff
changeset
|
137 <scanList count="1"> |
25b83cbd596a
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galaxyp
parents:
diff
changeset
|
138 <cvParam cvRef="MS" accession="MS:1000795" name="no combination" value="" /> |
25b83cbd596a
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galaxyp
parents:
diff
changeset
|
139 <scan instrumentConfigurationRef="IC1"> |
25b83cbd596a
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galaxyp
parents:
diff
changeset
|
140 <referenceableParamGroupRef ref="scan1" /> |
25b83cbd596a
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galaxyp
parents:
diff
changeset
|
141 <cvParam cvRef="IMS" accession="IMS:1000050" name="position x" value="1" /> |
25b83cbd596a
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galaxyp
parents:
diff
changeset
|
142 <cvParam cvRef="IMS" accession="IMS:1000051" name="position y" value="2" /> |
25b83cbd596a
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galaxyp
parents:
diff
changeset
|
143 <userParam name="3DPositionX" value="1.000000" /> |
25b83cbd596a
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galaxyp
parents:
diff
changeset
|
144 <userParam name="3DPositionY" value="2.000000" /> |
25b83cbd596a
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galaxyp
parents:
diff
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|
145 </scan> |
25b83cbd596a
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galaxyp
parents:
diff
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|
146 </scanList> |
25b83cbd596a
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galaxyp
parents:
diff
changeset
|
147 <binaryDataArrayList count="2"> |
25b83cbd596a
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galaxyp
parents:
diff
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|
148 <binaryDataArray encodedLength="0"> |
25b83cbd596a
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galaxyp
parents:
diff
changeset
|
149 <referenceableParamGroupRef ref="mzArray" /> |
25b83cbd596a
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galaxyp
parents:
diff
changeset
|
150 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="134400" /> |
25b83cbd596a
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galaxyp
parents:
diff
changeset
|
151 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="8399" /> |
25b83cbd596a
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galaxyp
parents:
diff
changeset
|
152 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="33596" /> |
25b83cbd596a
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galaxyp
parents:
diff
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|
153 <binary /> |
25b83cbd596a
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galaxyp
parents:
diff
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|
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galaxyp
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diff
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155 <binaryDataArray encodedLength="0"> |
25b83cbd596a
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galaxyp
parents:
diff
changeset
|
156 <referenceableParamGroupRef ref="intensityArray" /> |
25b83cbd596a
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galaxyp
parents:
diff
changeset
|
157 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="167996" /> |
25b83cbd596a
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galaxyp
parents:
diff
changeset
|
158 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="8399" /> |
25b83cbd596a
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galaxyp
parents:
diff
changeset
|
159 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="33596" /> |
25b83cbd596a
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galaxyp
parents:
diff
changeset
|
160 <binary /> |
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galaxyp
parents:
diff
changeset
|
161 </binaryDataArray> |
25b83cbd596a
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galaxyp
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diff
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|
162 </binaryDataArrayList> |
25b83cbd596a
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galaxyp
parents:
diff
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|
163 </spectrum> |
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galaxyp
parents:
diff
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|
164 <spectrum id="Spectrum=4" defaultArrayLength="0" index="4"> |
25b83cbd596a
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galaxyp
parents:
diff
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|
165 <referenceableParamGroupRef ref="spectrum1" /> |
25b83cbd596a
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galaxyp
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diff
changeset
|
166 <scanList count="1"> |
25b83cbd596a
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galaxyp
parents:
diff
changeset
|
167 <cvParam cvRef="MS" accession="MS:1000795" name="no combination" value="" /> |
25b83cbd596a
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galaxyp
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diff
changeset
|
168 <scan instrumentConfigurationRef="IC1"> |
25b83cbd596a
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galaxyp
parents:
diff
changeset
|
169 <referenceableParamGroupRef ref="scan1" /> |
25b83cbd596a
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galaxyp
parents:
diff
changeset
|
170 <cvParam cvRef="IMS" accession="IMS:1000050" name="position x" value="3" /> |
25b83cbd596a
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galaxyp
parents:
diff
changeset
|
171 <cvParam cvRef="IMS" accession="IMS:1000051" name="position y" value="2" /> |
25b83cbd596a
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galaxyp
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diff
changeset
|
172 <userParam name="3DPositionX" value="3.000000" /> |
25b83cbd596a
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galaxyp
parents:
diff
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|
173 <userParam name="3DPositionY" value="2.000000" /> |
25b83cbd596a
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galaxyp
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diff
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|
174 </scan> |
25b83cbd596a
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galaxyp
parents:
diff
changeset
|
175 </scanList> |
25b83cbd596a
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galaxyp
parents:
diff
changeset
|
176 <binaryDataArrayList count="2"> |
25b83cbd596a
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galaxyp
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diff
changeset
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177 <binaryDataArray encodedLength="0"> |
25b83cbd596a
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galaxyp
parents:
diff
changeset
|
178 <referenceableParamGroupRef ref="mzArray" /> |
25b83cbd596a
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galaxyp
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diff
changeset
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179 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="201592" /> |
25b83cbd596a
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galaxyp
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diff
changeset
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180 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="8399" /> |
25b83cbd596a
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galaxyp
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diff
changeset
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181 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="33596" /> |
25b83cbd596a
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galaxyp
parents:
diff
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|
182 <binary /> |
25b83cbd596a
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galaxyp
parents:
diff
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|
183 </binaryDataArray> |
25b83cbd596a
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galaxyp
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diff
changeset
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184 <binaryDataArray encodedLength="0"> |
25b83cbd596a
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galaxyp
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diff
changeset
|
185 <referenceableParamGroupRef ref="intensityArray" /> |
25b83cbd596a
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galaxyp
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diff
changeset
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186 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="235188" /> |
25b83cbd596a
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galaxyp
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diff
changeset
|
187 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="8399" /> |
25b83cbd596a
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galaxyp
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diff
changeset
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188 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="33596" /> |
25b83cbd596a
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galaxyp
parents:
diff
changeset
|
189 <binary /> |
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galaxyp
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diff
changeset
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190 </binaryDataArray> |
25b83cbd596a
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galaxyp
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diff
changeset
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191 </binaryDataArrayList> |
25b83cbd596a
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galaxyp
parents:
diff
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|
192 </spectrum> |
25b83cbd596a
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galaxyp
parents:
diff
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|
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25b83cbd596a
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galaxyp
parents:
diff
changeset
|
194 <referenceableParamGroupRef ref="spectrum1" /> |
25b83cbd596a
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galaxyp
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diff
changeset
|
195 <scanList count="1"> |
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galaxyp
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diff
changeset
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galaxyp
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diff
changeset
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197 <scan instrumentConfigurationRef="IC1"> |
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galaxyp
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diff
changeset
|
198 <referenceableParamGroupRef ref="scan1" /> |
25b83cbd596a
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galaxyp
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diff
changeset
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199 <cvParam cvRef="IMS" accession="IMS:1000050" name="position x" value="1" /> |
25b83cbd596a
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galaxyp
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diff
changeset
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200 <cvParam cvRef="IMS" accession="IMS:1000051" name="position y" value="3" /> |
25b83cbd596a
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galaxyp
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diff
changeset
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201 <userParam name="3DPositionX" value="1.000000" /> |
25b83cbd596a
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galaxyp
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diff
changeset
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202 <userParam name="3DPositionY" value="3.000000" /> |
25b83cbd596a
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galaxyp
parents:
diff
changeset
|
203 </scan> |
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galaxyp
parents:
diff
changeset
|
204 </scanList> |
25b83cbd596a
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galaxyp
parents:
diff
changeset
|
205 <binaryDataArrayList count="2"> |
25b83cbd596a
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galaxyp
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diff
changeset
|
206 <binaryDataArray encodedLength="0"> |
25b83cbd596a
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galaxyp
parents:
diff
changeset
|
207 <referenceableParamGroupRef ref="mzArray" /> |
25b83cbd596a
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galaxyp
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diff
changeset
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25b83cbd596a
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galaxyp
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diff
changeset
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25b83cbd596a
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galaxyp
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diff
changeset
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210 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="33596" /> |
25b83cbd596a
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galaxyp
parents:
diff
changeset
|
211 <binary /> |
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galaxyp
parents:
diff
changeset
|
212 </binaryDataArray> |
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galaxyp
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diff
changeset
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213 <binaryDataArray encodedLength="0"> |
25b83cbd596a
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galaxyp
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diff
changeset
|
214 <referenceableParamGroupRef ref="intensityArray" /> |
25b83cbd596a
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galaxyp
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diff
changeset
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215 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="302380" /> |
25b83cbd596a
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galaxyp
parents:
diff
changeset
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216 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="8399" /> |
25b83cbd596a
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galaxyp
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diff
changeset
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217 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="33596" /> |
25b83cbd596a
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galaxyp
parents:
diff
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|
218 <binary /> |
25b83cbd596a
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galaxyp
parents:
diff
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219 </binaryDataArray> |
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galaxyp
parents:
diff
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220 </binaryDataArrayList> |
25b83cbd596a
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galaxyp
parents:
diff
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|
221 </spectrum> |
25b83cbd596a
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galaxyp
parents:
diff
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|
222 </spectrumList> |
25b83cbd596a
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galaxyp
parents:
diff
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|
223 </run> |
25b83cbd596a
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galaxyp
parents:
diff
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|
224 </mzML> |