cardinal_mz_images: test-data/123_combined

annotate test-data/123_combined_auto.imzml @ 12:a95a82eb4d50 draft

"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit ca7bdf2cbc8a79278c56ab6890e038710a2a9ad8"

author	galaxyp
date	Wed, 21 Oct 2020 22:58:11 +0000
parents	08ebd8da780c
children

rev	line source
2 27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	1 <?xml version="1.0"?>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	2 <mzML version="1.1" xmlns="http://psi.hupo.org/ms/mzml" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://psi.hupo.org/ms/mzml http://psidev.info/files/ms/mzML/xsd/mzML1.1.0_idx.xsd">
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	3 <cvList count="3">
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	4 <cv id="MS" fullName="Proteomics Standards Initiative Mass Spectrometry Ontology" version="1.3.1" URI="http://psidev.info/ms/mzML/psi-ms.obo" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	5 <cv id="UO" fullName="Unit Ontology" version="1.15" URI="http://obo.cvs.sourceforge.net/obo/obo/ontology/phenotype/unit.obo" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	6 <cv id="IMS" fullName="Imaging MS Ontology" version="0.9.1" URI="http://www.maldi-msi.org/download/imzml/imagingMS.obo" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	7 </cvList>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	8 <fileDescription>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	9 <fileContent>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	10 <cvParam cvRef="MS" accession="MS:1000579" name="MS1 spectrum" value="" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	11 <cvParam cvRef="MS" accession="MS:1000128" name="profile spectrum" value="" />
9 08ebd8da780c "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 6e8b69ee3aff3c93f745a5de11cc9169130f2e5e" galaxyp parents: 7 diff changeset	12 <cvParam cvRef="IMS" accession="IMS:1000080" name="universally unique identifier" value="ae23e625-6ac2-4a33-be4a-b73af67bc0dd" />
08ebd8da780c "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 6e8b69ee3aff3c93f745a5de11cc9169130f2e5e" galaxyp parents: 7 diff changeset	13 <cvParam cvRef="IMS" accession="IMS:1000091" name="ibd SHA-1" value="1b81e4b14567ea9da1177c0490f636d0823b2aac" />
2 27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	14 <cvParam cvRef="IMS" accession="IMS:1000030" name="continuous" value="" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	15 </fileContent>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	16 </fileDescription>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	17 <referenceableParamGroupList count="4">
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	18 <referenceableParamGroup id="spectrum1">
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	19 <cvParam cvRef="MS" accession="MS:1000579" name="MS1 spectrum" value="" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	20 <cvParam cvRef="MS" accession="MS:1000511" name="ms level" value="0" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	21 <cvParam cvRef="MS" accession="MS:1000128" name="profile spectrum" value="" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	22 </referenceableParamGroup>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	23 <referenceableParamGroup id="scan1">
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	24 <cvParam cvRef="MS" accession="MS:1000093" name="increasing m/z scan" value="" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	25 </referenceableParamGroup>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	26 <referenceableParamGroup id="mzArray">
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	27 <cvParam cvRef="MS" accession="MS:1000576" name="no compression" value="" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	28 <cvParam cvRef="MS" accession="MS:1000514" name="m/z array" value="" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	29 <cvParam cvRef="IMS" accession="IMS:1000101" name="external data" value="true" />
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27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	32 <referenceableParamGroup id="intensityArray">
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	33 <cvParam cvRef="MS" accession="MS:1000576" name="no compression" value="" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	34 <cvParam cvRef="MS" accession="MS:1000515" name="intensity array" value="" unitCvRef="MS" unitAccession="MS:1000131" unitName="number of counts" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	35 <cvParam cvRef="IMS" accession="IMS:1000101" name="external data" value="true" />
5 4a05e47cd0ea "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a" galaxyp parents: 2 diff changeset	36 <cvParam cvRef="MS" accession="MS:1000521" name="32-bit float" value="" />
2 27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	37 </referenceableParamGroup>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	38 </referenceableParamGroupList>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	39 <sampleList count="1">
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	40 <sample id="sample1" name="Sample1">
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	41 <cvParam cvRef="MS" accession="MS:1000001" name="sample number" value="1" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	42 </sample>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	43 </sampleList>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	44 <softwareList count="1">
9 08ebd8da780c "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 6e8b69ee3aff3c93f745a5de11cc9169130f2e5e" galaxyp parents: 7 diff changeset	45 <software id="Cardinal" version="2.6.0">
2 27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	46 <cvParam cvRef="MS" accession="MS:1000799" name="custom unreleased software tool" value="" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	47 </software>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	48 </softwareList>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	49 <scanSettingsList count="1">
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	50 <scanSettings id="scansettings1">
5 4a05e47cd0ea "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a" galaxyp parents: 2 diff changeset	51 <cvParam cvRef="IMS" accession="IMS:1000042" name="max count of pixel x" value="3" />
4a05e47cd0ea "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a" galaxyp parents: 2 diff changeset	52 <cvParam cvRef="IMS" accession="IMS:1000043" name="max count of pixel y" value="6" />
4a05e47cd0ea "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a" galaxyp parents: 2 diff changeset	53 <cvParam cvRef="IMS" accession="IMS:1000044" name="max dimension x" value="8" />
4a05e47cd0ea "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a" galaxyp parents: 2 diff changeset	54 <cvParam cvRef="IMS" accession="IMS:1000045" name="max dimension y" value="11" />
4a05e47cd0ea "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a" galaxyp parents: 2 diff changeset	55 <cvParam cvRef="IMS" accession="IMS:1000046" name="pixel size x" value="1.000000" />
4a05e47cd0ea "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a" galaxyp parents: 2 diff changeset	56 <cvParam cvRef="IMS" accession="IMS:1000047" name="pixel size y" value="1.000000" />
2 27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	57 </scanSettings>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	58 </scanSettingsList>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	59 <instrumentConfigurationList count="1">
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4a05e47cd0ea "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a" galaxyp parents: 2 diff changeset	61 <cvParam cvRef="MS" accession="MS:1000031" name="instrument model" />
4a05e47cd0ea "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a" galaxyp parents: 2 diff changeset	62 </instrumentConfiguration>
2 27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	63 </instrumentConfigurationList>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	64 <dataProcessingList count="1">
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	65 <dataProcessing id="CardinalWriteImzML">
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	66 <processingMethod order="1" softwareRef="Cardinal">
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	67 <cvParam cvRef="MS" accession="MS:1000544" name="Conversion to mzML" value="" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	68 </processingMethod>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	69 </dataProcessing>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	70 </dataProcessingList>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	71 <run defaultInstrumentConfigurationRef="IC1" id="Experiment01" sampleRef="sample1">
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	72 <spectrumList count="12" defaultDataProcessingRef="CardinalWriteImzML">
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27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	74 <referenceableParamGroupRef ref="spectrum1" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	75 <scanList count="1">
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	76 <cvParam cvRef="MS" accession="MS:1000795" name="no combination" value="" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	77 <scan instrumentConfigurationRef="IC1">
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	78 <referenceableParamGroupRef ref="scan1" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	79 <cvParam cvRef="IMS" accession="IMS:1000050" name="position x" value="1" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	80 <cvParam cvRef="IMS" accession="IMS:1000051" name="position y" value="1" />
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5e6f8fb2df07 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f986c51abe33c7f622d429a3c4a79ee24b33c1f3" galaxyp parents: 5 diff changeset	82 <userParam name="3DPositionY" value="1.000000" />
2 27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	83 </scan>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	84 </scanList>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	85 <binaryDataArrayList count="2">
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27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	206 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="33596" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	207 <binary />
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27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	224 <cvParam cvRef="IMS" accession="IMS:1000050" name="position x" value="7" />
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27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	229 </scanList>
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27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	253 <cvParam cvRef="IMS" accession="IMS:1000050" name="position x" value="8" />
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27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	258 </scanList>
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27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	262 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="16" />
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27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	307 <scanList count="1">
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27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	311 <cvParam cvRef="IMS" accession="IMS:1000050" name="position x" value="8" />
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2 27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	315 </scan>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	316 </scanList>
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27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	365 <scanList count="1">
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	366 <cvParam cvRef="MS" accession="MS:1000795" name="no combination" value="" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	367 <scan instrumentConfigurationRef="IC1">
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	368 <referenceableParamGroupRef ref="scan1" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	369 <cvParam cvRef="IMS" accession="IMS:1000050" name="position x" value="1" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	370 <cvParam cvRef="IMS" accession="IMS:1000051" name="position y" value="10" />
7 5e6f8fb2df07 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f986c51abe33c7f622d429a3c4a79ee24b33c1f3" galaxyp parents: 5 diff changeset	371 <userParam name="3DPositionX" value="1.000000" />
5e6f8fb2df07 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f986c51abe33c7f622d429a3c4a79ee24b33c1f3" galaxyp parents: 5 diff changeset	372 <userParam name="3DPositionY" value="10.000000" />
2 27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	373 </scan>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	374 </scanList>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	375 <binaryDataArrayList count="2">
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	376 <binaryDataArray encodedLength="0">
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	377 <referenceableParamGroupRef ref="mzArray" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	378 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="16" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	379 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="8399" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	380 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="33596" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	381 <binary />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	382 </binaryDataArray>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	383 <binaryDataArray encodedLength="0">
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	384 <referenceableParamGroupRef ref="intensityArray" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	385 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="369572" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	386 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="8399" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	387 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="33596" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	388 <binary />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	389 </binaryDataArray>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	390 </binaryDataArrayList>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	391 </spectrum>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	392 <spectrum id="Spectrum=12" defaultArrayLength="0" index="12">
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	393 <referenceableParamGroupRef ref="spectrum1" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	394 <scanList count="1">
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	395 <cvParam cvRef="MS" accession="MS:1000795" name="no combination" value="" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	396 <scan instrumentConfigurationRef="IC1">
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	397 <referenceableParamGroupRef ref="scan1" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	398 <cvParam cvRef="IMS" accession="IMS:1000050" name="position x" value="1" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	399 <cvParam cvRef="IMS" accession="IMS:1000051" name="position y" value="11" />
7 5e6f8fb2df07 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f986c51abe33c7f622d429a3c4a79ee24b33c1f3" galaxyp parents: 5 diff changeset	400 <userParam name="3DPositionX" value="1.000000" />
5e6f8fb2df07 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f986c51abe33c7f622d429a3c4a79ee24b33c1f3" galaxyp parents: 5 diff changeset	401 <userParam name="3DPositionY" value="11.000000" />
2 27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	402 </scan>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	403 </scanList>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	404 <binaryDataArrayList count="2">
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	405 <binaryDataArray encodedLength="0">
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	406 <referenceableParamGroupRef ref="mzArray" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	407 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="16" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	408 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="8399" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	409 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="33596" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	410 <binary />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	411 </binaryDataArray>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	412 <binaryDataArray encodedLength="0">
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	413 <referenceableParamGroupRef ref="intensityArray" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	414 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="403168" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	415 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="8399" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	416 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="33596" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	417 <binary />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	418 </binaryDataArray>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	419 </binaryDataArrayList>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	420 </spectrum>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	421 </spectrumList>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	422 </run>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	423 </mzML>

Mercurial > repos > galaxyp > cardinal_mz_images

annotate test-data/123_combined_auto.imzml @ 12:a95a82eb4d50 draft