cardinal_mz_images: test-data/112_auto

annotate test-data/112_auto_combined.imzml @ 11:daf2ee9127fd draft

"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 0c667acd7cc0d0ef6c4e979ca29372b8c0d92c23"

author	galaxyp
date	Tue, 06 Oct 2020 07:48:21 +0000
parents	08ebd8da780c
children

rev	line source
2 27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	1 <?xml version="1.0"?>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	2 <mzML version="1.1" xmlns="http://psi.hupo.org/ms/mzml" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://psi.hupo.org/ms/mzml http://psidev.info/files/ms/mzML/xsd/mzML1.1.0_idx.xsd">
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	3 <cvList count="3">
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	4 <cv id="MS" fullName="Proteomics Standards Initiative Mass Spectrometry Ontology" version="1.3.1" URI="http://psidev.info/ms/mzML/psi-ms.obo" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	5 <cv id="UO" fullName="Unit Ontology" version="1.15" URI="http://obo.cvs.sourceforge.net/obo/obo/ontology/phenotype/unit.obo" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	6 <cv id="IMS" fullName="Imaging MS Ontology" version="0.9.1" URI="http://www.maldi-msi.org/download/imzml/imagingMS.obo" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	7 </cvList>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	8 <fileDescription>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	9 <fileContent>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	10 <cvParam cvRef="MS" accession="MS:1000579" name="MS1 spectrum" value="" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	11 <cvParam cvRef="MS" accession="MS:1000128" name="profile spectrum" value="" />
9 08ebd8da780c "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 6e8b69ee3aff3c93f745a5de11cc9169130f2e5e" galaxyp parents: 7 diff changeset	12 <cvParam cvRef="IMS" accession="IMS:1000080" name="universally unique identifier" value="23f1e1c8-aaa5-4d04-ab81-da14f7d24507" />
08ebd8da780c "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 6e8b69ee3aff3c93f745a5de11cc9169130f2e5e" galaxyp parents: 7 diff changeset	13 <cvParam cvRef="IMS" accession="IMS:1000091" name="ibd SHA-1" value="b2e009b6e72791420e704b751b4fc1a0f36bf420" />
2 27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	14 <cvParam cvRef="IMS" accession="IMS:1000030" name="continuous" value="" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	15 </fileContent>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	16 </fileDescription>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	17 <referenceableParamGroupList count="4">
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	18 <referenceableParamGroup id="spectrum1">
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	19 <cvParam cvRef="MS" accession="MS:1000579" name="MS1 spectrum" value="" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	20 <cvParam cvRef="MS" accession="MS:1000511" name="ms level" value="0" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	21 <cvParam cvRef="MS" accession="MS:1000128" name="profile spectrum" value="" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	22 </referenceableParamGroup>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	23 <referenceableParamGroup id="scan1">
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	24 <cvParam cvRef="MS" accession="MS:1000093" name="increasing m/z scan" value="" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	25 </referenceableParamGroup>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	26 <referenceableParamGroup id="mzArray">
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	27 <cvParam cvRef="MS" accession="MS:1000576" name="no compression" value="" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	28 <cvParam cvRef="MS" accession="MS:1000514" name="m/z array" value="" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	29 <cvParam cvRef="IMS" accession="IMS:1000101" name="external data" value="true" />
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27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	32 <referenceableParamGroup id="intensityArray">
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	33 <cvParam cvRef="MS" accession="MS:1000576" name="no compression" value="" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	34 <cvParam cvRef="MS" accession="MS:1000515" name="intensity array" value="" unitCvRef="MS" unitAccession="MS:1000131" unitName="number of counts" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	35 <cvParam cvRef="IMS" accession="IMS:1000101" name="external data" value="true" />
5 4a05e47cd0ea "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a" galaxyp parents: 2 diff changeset	36 <cvParam cvRef="MS" accession="MS:1000521" name="32-bit float" value="" />
2 27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	37 </referenceableParamGroup>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	38 </referenceableParamGroupList>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	39 <sampleList count="1">
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	40 <sample id="sample1" name="Sample1">
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	41 <cvParam cvRef="MS" accession="MS:1000001" name="sample number" value="1" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	42 </sample>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	43 </sampleList>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	44 <softwareList count="1">
9 08ebd8da780c "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 6e8b69ee3aff3c93f745a5de11cc9169130f2e5e" galaxyp parents: 7 diff changeset	45 <software id="Cardinal" version="2.6.0">
2 27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	46 <cvParam cvRef="MS" accession="MS:1000799" name="custom unreleased software tool" value="" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	47 </software>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	48 </softwareList>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	49 <scanSettingsList count="1">
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	50 <scanSettings id="scansettings1">
5 4a05e47cd0ea "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a" galaxyp parents: 2 diff changeset	51 <cvParam cvRef="IMS" accession="IMS:1000042" name="max count of pixel x" value="5" />
2 27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	52 <cvParam cvRef="IMS" accession="IMS:1000043" name="max count of pixel y" value="3" />
5 4a05e47cd0ea "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a" galaxyp parents: 2 diff changeset	53 <cvParam cvRef="IMS" accession="IMS:1000044" name="max dimension x" value="15" />
4a05e47cd0ea "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a" galaxyp parents: 2 diff changeset	54 <cvParam cvRef="IMS" accession="IMS:1000045" name="max dimension y" value="3" />
4a05e47cd0ea "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a" galaxyp parents: 2 diff changeset	55 <cvParam cvRef="IMS" accession="IMS:1000046" name="pixel size x" value="1.000000" />
4a05e47cd0ea "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a" galaxyp parents: 2 diff changeset	56 <cvParam cvRef="IMS" accession="IMS:1000047" name="pixel size y" value="1.000000" />
2 27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	57 </scanSettings>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	58 </scanSettingsList>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	59 <instrumentConfigurationList count="1">
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4a05e47cd0ea "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a" galaxyp parents: 2 diff changeset	61 <cvParam cvRef="MS" accession="MS:1000031" name="instrument model" />
4a05e47cd0ea "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a" galaxyp parents: 2 diff changeset	62 </instrumentConfiguration>
2 27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	63 </instrumentConfigurationList>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	64 <dataProcessingList count="1">
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	65 <dataProcessing id="CardinalWriteImzML">
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	66 <processingMethod order="1" softwareRef="Cardinal">
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	67 <cvParam cvRef="MS" accession="MS:1000544" name="Conversion to mzML" value="" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	68 </processingMethod>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	69 </dataProcessing>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	70 </dataProcessingList>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	71 <run defaultInstrumentConfigurationRef="IC1" id="Experiment01" sampleRef="sample1">
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	72 <spectrumList count="15" defaultDataProcessingRef="CardinalWriteImzML">
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27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	74 <referenceableParamGroupRef ref="spectrum1" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	75 <scanList count="1">
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	76 <cvParam cvRef="MS" accession="MS:1000795" name="no combination" value="" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	77 <scan instrumentConfigurationRef="IC1">
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	78 <referenceableParamGroupRef ref="scan1" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	79 <cvParam cvRef="IMS" accession="IMS:1000050" name="position x" value="1" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	80 <cvParam cvRef="IMS" accession="IMS:1000051" name="position y" value="1" />
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5e6f8fb2df07 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f986c51abe33c7f622d429a3c4a79ee24b33c1f3" galaxyp parents: 5 diff changeset	82 <userParam name="3DPositionY" value="1.000000" />
2 27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	83 </scan>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	84 </scanList>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	85 <binaryDataArrayList count="2">
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27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	206 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="33596" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	207 <binary />
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27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	224 <cvParam cvRef="IMS" accession="IMS:1000050" name="position x" value="7" />
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27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	253 <cvParam cvRef="IMS" accession="IMS:1000050" name="position x" value="9" />
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27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	258 </scanList>
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27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	282 <cvParam cvRef="IMS" accession="IMS:1000050" name="position x" value="10" />
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27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	293 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="33596" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	294 <binary />
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27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	306 <referenceableParamGroupRef ref="spectrum1" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	307 <scanList count="1">
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27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	310 <referenceableParamGroupRef ref="scan1" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	311 <cvParam cvRef="IMS" accession="IMS:1000050" name="position x" value="9" />
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2 27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	315 </scan>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	316 </scanList>
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27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	340 <cvParam cvRef="IMS" accession="IMS:1000050" name="position x" value="10" />
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27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	394 <scanList count="1">
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27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	398 <cvParam cvRef="IMS" accession="IMS:1000050" name="position x" value="10" />
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27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	403 </scanList>
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27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	457 <cvParam cvRef="IMS" accession="IMS:1000051" name="position y" value="2" />
7 5e6f8fb2df07 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f986c51abe33c7f622d429a3c4a79ee24b33c1f3" galaxyp parents: 5 diff changeset	458 <userParam name="3DPositionX" value="15.000000" />
5e6f8fb2df07 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f986c51abe33c7f622d429a3c4a79ee24b33c1f3" galaxyp parents: 5 diff changeset	459 <userParam name="3DPositionY" value="2.000000" />
2 27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	460 </scan>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	461 </scanList>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	462 <binaryDataArrayList count="2">
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	463 <binaryDataArray encodedLength="0">
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	464 <referenceableParamGroupRef ref="mzArray" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	465 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="16" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	466 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="8399" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	467 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="33596" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	468 <binary />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	469 </binaryDataArray>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	470 <binaryDataArray encodedLength="0">
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	471 <referenceableParamGroupRef ref="intensityArray" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	472 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="470360" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	473 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="8399" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	474 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="33596" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	475 <binary />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	476 </binaryDataArray>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	477 </binaryDataArrayList>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	478 </spectrum>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	479 <spectrum id="Spectrum=15" defaultArrayLength="0" index="15">
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	480 <referenceableParamGroupRef ref="spectrum1" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	481 <scanList count="1">
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	482 <cvParam cvRef="MS" accession="MS:1000795" name="no combination" value="" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	483 <scan instrumentConfigurationRef="IC1">
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	484 <referenceableParamGroupRef ref="scan1" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	485 <cvParam cvRef="IMS" accession="IMS:1000050" name="position x" value="15" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	486 <cvParam cvRef="IMS" accession="IMS:1000051" name="position y" value="3" />
7 5e6f8fb2df07 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f986c51abe33c7f622d429a3c4a79ee24b33c1f3" galaxyp parents: 5 diff changeset	487 <userParam name="3DPositionX" value="15.000000" />
5e6f8fb2df07 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f986c51abe33c7f622d429a3c4a79ee24b33c1f3" galaxyp parents: 5 diff changeset	488 <userParam name="3DPositionY" value="3.000000" />
2 27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	489 </scan>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	490 </scanList>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	491 <binaryDataArrayList count="2">
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	492 <binaryDataArray encodedLength="0">
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	493 <referenceableParamGroupRef ref="mzArray" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	494 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="16" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	495 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="8399" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	496 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="33596" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	497 <binary />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	498 </binaryDataArray>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	499 <binaryDataArray encodedLength="0">
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	500 <referenceableParamGroupRef ref="intensityArray" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	501 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="503956" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	502 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="8399" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	503 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="33596" />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	504 <binary />
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	505 </binaryDataArray>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	506 </binaryDataArrayList>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	507 </spectrum>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	508 </spectrumList>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	509 </run>
27a4c660bbca planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f127be2141cf22e269c85282d226eb16fe14a9c1 galaxyp parents: diff changeset	510 </mzML>

Mercurial > repos > galaxyp > cardinal_mz_images

annotate test-data/112_auto_combined.imzml @ 11:daf2ee9127fd draft