Mercurial > repos > galaxyp > cardinal_preprocessing
annotate test-data/123_combined.imzml @ 14:f1897eb07081 draft
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 180894cfabbee2d308be140a0f0b4dba119e88d4-dirty"
author | galaxyp |
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date | Wed, 23 Dec 2020 22:32:19 +0000 |
parents | ca727a6dede6 |
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rev | line source |
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5
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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1 <?xml version="1.0"?> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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2 <mzML version="1.1" xmlns="http://psi.hupo.org/ms/mzml" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://psi.hupo.org/ms/mzml http://psidev.info/files/ms/mzML/xsd/mzML1.1.0_idx.xsd"> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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3 <cvList count="3"> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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4 <cv id="MS" fullName="Proteomics Standards Initiative Mass Spectrometry Ontology" version="1.3.1" URI="http://psidev.info/ms/mzML/psi-ms.obo" /> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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5 <cv id="UO" fullName="Unit Ontology" version="1.15" URI="http://obo.cvs.sourceforge.net/obo/obo/ontology/phenotype/unit.obo" /> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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6 <cv id="IMS" fullName="Imaging MS Ontology" version="0.9.1" URI="http://www.maldi-msi.org/download/imzml/imagingMS.obo" /> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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7 </cvList> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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8 <fileDescription> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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9 <fileContent> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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10 <cvParam cvRef="MS" accession="MS:1000579" name="MS1 spectrum" value="" /> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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11 <cvParam cvRef="MS" accession="MS:1000128" name="profile spectrum" value="" /> |
9
ca727a6dede6
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 6e8b69ee3aff3c93f745a5de11cc9169130f2e5e"
galaxyp
parents:
7
diff
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12 <cvParam cvRef="IMS" accession="IMS:1000080" name="universally unique identifier" value="383dcc6e-fa4e-4ffe-8523-9cd0c3bd2571" /> |
ca727a6dede6
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 6e8b69ee3aff3c93f745a5de11cc9169130f2e5e"
galaxyp
parents:
7
diff
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13 <cvParam cvRef="IMS" accession="IMS:1000091" name="ibd SHA-1" value="2cd98028c7ab9bd53b698168b508a0ac74f256c9" /> |
5
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
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14 <cvParam cvRef="IMS" accession="IMS:1000030" name="continuous" value="" /> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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15 </fileContent> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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16 </fileDescription> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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17 <referenceableParamGroupList count="4"> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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18 <referenceableParamGroup id="spectrum1"> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
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19 <cvParam cvRef="MS" accession="MS:1000579" name="MS1 spectrum" value="" /> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
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20 <cvParam cvRef="MS" accession="MS:1000511" name="ms level" value="0" /> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
changeset
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21 <cvParam cvRef="MS" accession="MS:1000128" name="profile spectrum" value="" /> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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22 </referenceableParamGroup> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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23 <referenceableParamGroup id="scan1"> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
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24 <cvParam cvRef="MS" accession="MS:1000093" name="increasing m/z scan" value="" /> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
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25 </referenceableParamGroup> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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26 <referenceableParamGroup id="mzArray"> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
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27 <cvParam cvRef="MS" accession="MS:1000576" name="no compression" value="" /> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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28 <cvParam cvRef="MS" accession="MS:1000514" name="m/z array" value="" unitCvRef="MS" unitAccession="MS:1000040" unitName="m/z" /> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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29 <cvParam cvRef="IMS" accession="IMS:1000101" name="external data" value="true" /> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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30 <cvParam cvRef="MS" accession="MS:1000521" name="32-bit float" value="" /> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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31 </referenceableParamGroup> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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32 <referenceableParamGroup id="intensityArray"> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
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33 <cvParam cvRef="MS" accession="MS:1000576" name="no compression" value="" /> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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34 <cvParam cvRef="MS" accession="MS:1000515" name="intensity array" value="" unitCvRef="MS" unitAccession="MS:1000131" unitName="number of counts" /> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
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35 <cvParam cvRef="IMS" accession="IMS:1000101" name="external data" value="true" /> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
changeset
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36 <cvParam cvRef="MS" accession="MS:1000521" name="32-bit float" value="" /> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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37 </referenceableParamGroup> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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38 </referenceableParamGroupList> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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39 <sampleList count="1"> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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40 <sample id="sample1" name="Sample1"> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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41 <cvParam cvRef="MS" accession="MS:1000001" name="sample number" value="1" /> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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42 </sample> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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43 </sampleList> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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44 <softwareList count="1"> |
9
ca727a6dede6
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 6e8b69ee3aff3c93f745a5de11cc9169130f2e5e"
galaxyp
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7
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45 <software id="Cardinal" version="2.6.0"> |
5
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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46 <cvParam cvRef="MS" accession="MS:1000799" name="custom unreleased software tool" value="" /> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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47 </software> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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48 </softwareList> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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49 <scanSettingsList count="1"> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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50 <scanSettings id="scansettings1"> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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51 <cvParam cvRef="IMS" accession="IMS:1000042" name="max count of pixel x" value="4" /> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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52 <cvParam cvRef="IMS" accession="IMS:1000043" name="max count of pixel y" value="3" /> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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53 <cvParam cvRef="IMS" accession="IMS:1000044" name="max dimension x" value="9" /> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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54 <cvParam cvRef="IMS" accession="IMS:1000045" name="max dimension y" value="3" /> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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55 <cvParam cvRef="IMS" accession="IMS:1000046" name="pixel size x" value="1.000000" /> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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56 <cvParam cvRef="IMS" accession="IMS:1000047" name="pixel size y" value="1.000000" /> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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57 </scanSettings> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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58 </scanSettingsList> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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59 <instrumentConfigurationList count="1"> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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60 <instrumentConfiguration id="IC1"> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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61 <cvParam cvRef="MS" accession="MS:1000031" name="instrument model" /> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
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62 </instrumentConfiguration> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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63 </instrumentConfigurationList> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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64 <dataProcessingList count="1"> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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65 <dataProcessing id="CardinalWriteImzML"> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
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66 <processingMethod order="1" softwareRef="Cardinal"> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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67 <cvParam cvRef="MS" accession="MS:1000544" name="Conversion to mzML" value="" /> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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68 </processingMethod> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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69 </dataProcessing> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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70 </dataProcessingList> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
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71 <run defaultInstrumentConfigurationRef="IC1" id="Experiment01" sampleRef="sample1"> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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72 <spectrumList count="12" defaultDataProcessingRef="CardinalWriteImzML"> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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73 <spectrum id="Spectrum=1" defaultArrayLength="0" index="1"> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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74 <referenceableParamGroupRef ref="spectrum1" /> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
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changeset
|
75 <scanList count="1"> |
ed9ed1e6cca2
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galaxyp
parents:
diff
changeset
|
76 <cvParam cvRef="MS" accession="MS:1000795" name="no combination" value="" /> |
ed9ed1e6cca2
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galaxyp
parents:
diff
changeset
|
77 <scan instrumentConfigurationRef="IC1"> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
changeset
|
78 <referenceableParamGroupRef ref="scan1" /> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
changeset
|
79 <cvParam cvRef="IMS" accession="IMS:1000050" name="position x" value="1" /> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
changeset
|
80 <cvParam cvRef="IMS" accession="IMS:1000051" name="position y" value="1" /> |
7
44a4b31fcbf3
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f986c51abe33c7f622d429a3c4a79ee24b33c1f3"
galaxyp
parents:
5
diff
changeset
|
81 <userParam name="3DPositionX" value="1.000000" /> |
44a4b31fcbf3
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f986c51abe33c7f622d429a3c4a79ee24b33c1f3"
galaxyp
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5
diff
changeset
|
82 <userParam name="3DPositionY" value="1.000000" /> |
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ed9ed1e6cca2
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galaxyp
parents:
diff
changeset
|
83 </scan> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
changeset
|
84 </scanList> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
changeset
|
85 <binaryDataArrayList count="2"> |
ed9ed1e6cca2
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galaxyp
parents:
diff
changeset
|
86 <binaryDataArray encodedLength="0"> |
ed9ed1e6cca2
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galaxyp
parents:
diff
changeset
|
87 <referenceableParamGroupRef ref="mzArray" /> |
ed9ed1e6cca2
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galaxyp
parents:
diff
changeset
|
88 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="16" /> |
ed9ed1e6cca2
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galaxyp
parents:
diff
changeset
|
89 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="8399" /> |
ed9ed1e6cca2
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galaxyp
parents:
diff
changeset
|
90 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="33596" /> |
ed9ed1e6cca2
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galaxyp
parents:
diff
changeset
|
91 <binary /> |
ed9ed1e6cca2
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galaxyp
parents:
diff
changeset
|
92 </binaryDataArray> |
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galaxyp
parents:
diff
changeset
|
93 <binaryDataArray encodedLength="0"> |
ed9ed1e6cca2
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galaxyp
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diff
changeset
|
94 <referenceableParamGroupRef ref="intensityArray" /> |
ed9ed1e6cca2
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galaxyp
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diff
changeset
|
95 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="33612" /> |
ed9ed1e6cca2
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galaxyp
parents:
diff
changeset
|
96 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="8399" /> |
ed9ed1e6cca2
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galaxyp
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diff
changeset
|
97 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="33596" /> |
ed9ed1e6cca2
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galaxyp
parents:
diff
changeset
|
98 <binary /> |
ed9ed1e6cca2
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galaxyp
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diff
changeset
|
99 </binaryDataArray> |
ed9ed1e6cca2
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galaxyp
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diff
changeset
|
100 </binaryDataArrayList> |
ed9ed1e6cca2
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galaxyp
parents:
diff
changeset
|
101 </spectrum> |
ed9ed1e6cca2
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galaxyp
parents:
diff
changeset
|
102 <spectrum id="Spectrum=2" defaultArrayLength="0" index="2"> |
ed9ed1e6cca2
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galaxyp
parents:
diff
changeset
|
103 <referenceableParamGroupRef ref="spectrum1" /> |
ed9ed1e6cca2
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galaxyp
parents:
diff
changeset
|
104 <scanList count="1"> |
ed9ed1e6cca2
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galaxyp
parents:
diff
changeset
|
105 <cvParam cvRef="MS" accession="MS:1000795" name="no combination" value="" /> |
ed9ed1e6cca2
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galaxyp
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diff
changeset
|
106 <scan instrumentConfigurationRef="IC1"> |
ed9ed1e6cca2
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galaxyp
parents:
diff
changeset
|
107 <referenceableParamGroupRef ref="scan1" /> |
ed9ed1e6cca2
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galaxyp
parents:
diff
changeset
|
108 <cvParam cvRef="IMS" accession="IMS:1000050" name="position x" value="1" /> |
ed9ed1e6cca2
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galaxyp
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diff
changeset
|
109 <cvParam cvRef="IMS" accession="IMS:1000051" name="position y" value="2" /> |
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44a4b31fcbf3
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galaxyp
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5
diff
changeset
|
110 <userParam name="3DPositionX" value="1.000000" /> |
44a4b31fcbf3
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galaxyp
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changeset
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ed9ed1e6cca2
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galaxyp
parents:
diff
changeset
|
112 </scan> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
changeset
|
113 </scanList> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
changeset
|
114 <binaryDataArrayList count="2"> |
ed9ed1e6cca2
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galaxyp
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changeset
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115 <binaryDataArray encodedLength="0"> |
ed9ed1e6cca2
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galaxyp
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diff
changeset
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116 <referenceableParamGroupRef ref="mzArray" /> |
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galaxyp
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diff
changeset
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117 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="16" /> |
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galaxyp
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diff
changeset
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ed9ed1e6cca2
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galaxyp
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diff
changeset
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119 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="33596" /> |
ed9ed1e6cca2
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galaxyp
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diff
changeset
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120 <binary /> |
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galaxyp
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diff
changeset
|
121 </binaryDataArray> |
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galaxyp
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changeset
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122 <binaryDataArray encodedLength="0"> |
ed9ed1e6cca2
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galaxyp
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changeset
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123 <referenceableParamGroupRef ref="intensityArray" /> |
ed9ed1e6cca2
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galaxyp
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diff
changeset
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ed9ed1e6cca2
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galaxyp
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diff
changeset
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125 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="8399" /> |
ed9ed1e6cca2
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galaxyp
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diff
changeset
|
126 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="33596" /> |
ed9ed1e6cca2
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galaxyp
parents:
diff
changeset
|
127 <binary /> |
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galaxyp
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diff
changeset
|
128 </binaryDataArray> |
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galaxyp
parents:
diff
changeset
|
129 </binaryDataArrayList> |
ed9ed1e6cca2
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galaxyp
parents:
diff
changeset
|
130 </spectrum> |
ed9ed1e6cca2
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galaxyp
parents:
diff
changeset
|
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ed9ed1e6cca2
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galaxyp
parents:
diff
changeset
|
132 <referenceableParamGroupRef ref="spectrum1" /> |
ed9ed1e6cca2
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galaxyp
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changeset
|
133 <scanList count="1"> |
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galaxyp
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diff
changeset
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134 <cvParam cvRef="MS" accession="MS:1000795" name="no combination" value="" /> |
ed9ed1e6cca2
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galaxyp
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changeset
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135 <scan instrumentConfigurationRef="IC1"> |
ed9ed1e6cca2
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galaxyp
parents:
diff
changeset
|
136 <referenceableParamGroupRef ref="scan1" /> |
ed9ed1e6cca2
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galaxyp
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diff
changeset
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137 <cvParam cvRef="IMS" accession="IMS:1000050" name="position x" value="1" /> |
ed9ed1e6cca2
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galaxyp
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diff
changeset
|
138 <cvParam cvRef="IMS" accession="IMS:1000051" name="position y" value="3" /> |
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44a4b31fcbf3
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galaxyp
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changeset
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139 <userParam name="3DPositionX" value="1.000000" /> |
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galaxyp
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changeset
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ed9ed1e6cca2
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galaxyp
parents:
diff
changeset
|
141 </scan> |
ed9ed1e6cca2
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galaxyp
parents:
diff
changeset
|
142 </scanList> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
changeset
|
143 <binaryDataArrayList count="2"> |
ed9ed1e6cca2
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galaxyp
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changeset
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144 <binaryDataArray encodedLength="0"> |
ed9ed1e6cca2
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galaxyp
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diff
changeset
|
145 <referenceableParamGroupRef ref="mzArray" /> |
ed9ed1e6cca2
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galaxyp
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diff
changeset
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146 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="16" /> |
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galaxyp
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diff
changeset
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ed9ed1e6cca2
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galaxyp
parents:
diff
changeset
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ed9ed1e6cca2
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galaxyp
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changeset
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149 <binary /> |
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galaxyp
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diff
changeset
|
150 </binaryDataArray> |
ed9ed1e6cca2
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galaxyp
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changeset
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ed9ed1e6cca2
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galaxyp
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changeset
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152 <referenceableParamGroupRef ref="intensityArray" /> |
ed9ed1e6cca2
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galaxyp
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changeset
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changeset
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154 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="8399" /> |
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changeset
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diff
changeset
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changeset
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changeset
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changeset
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diff
changeset
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diff
changeset
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changeset
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diff
changeset
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changeset
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165 <referenceableParamGroupRef ref="scan1" /> |
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diff
changeset
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diff
changeset
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changeset
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changeset
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ed9ed1e6cca2
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galaxyp
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changeset
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170 </scan> |
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galaxyp
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diff
changeset
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171 </scanList> |
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changeset
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changeset
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changeset
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changeset
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changeset
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changeset
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changeset
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changeset
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changeset
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changeset
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changeset
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changeset
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changeset
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changeset
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changeset
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changeset
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changeset
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changeset
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galaxyp
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changeset
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199 </scan> |
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galaxyp
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changeset
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changeset
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changeset
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changeset
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changeset
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changeset
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changeset
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galaxyp
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changeset
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changeset
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changeset
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changeset
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changeset
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changeset
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changeset
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changeset
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changeset
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changeset
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changeset
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changeset
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changeset
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changeset
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galaxyp
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changeset
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228 </scan> |
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galaxyp
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changeset
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galaxyp
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changeset
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changeset
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|
232 <referenceableParamGroupRef ref="mzArray" /> |
ed9ed1e6cca2
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galaxyp
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diff
changeset
|
233 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="16" /> |
ed9ed1e6cca2
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galaxyp
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diff
changeset
|
234 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="8399" /> |
ed9ed1e6cca2
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galaxyp
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diff
changeset
|
235 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="33596" /> |
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galaxyp
parents:
diff
changeset
|
236 <binary /> |
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galaxyp
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diff
changeset
|
237 </binaryDataArray> |
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galaxyp
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diff
changeset
|
238 <binaryDataArray encodedLength="0"> |
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galaxyp
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diff
changeset
|
239 <referenceableParamGroupRef ref="intensityArray" /> |
ed9ed1e6cca2
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galaxyp
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diff
changeset
|
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ed9ed1e6cca2
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galaxyp
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diff
changeset
|
241 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="8399" /> |
ed9ed1e6cca2
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galaxyp
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diff
changeset
|
242 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="33596" /> |
ed9ed1e6cca2
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galaxyp
parents:
diff
changeset
|
243 <binary /> |
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galaxyp
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diff
changeset
|
244 </binaryDataArray> |
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galaxyp
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diff
changeset
|
245 </binaryDataArrayList> |
ed9ed1e6cca2
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galaxyp
parents:
diff
changeset
|
246 </spectrum> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
changeset
|
247 <spectrum id="Spectrum=7" defaultArrayLength="0" index="7"> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
changeset
|
248 <referenceableParamGroupRef ref="spectrum1" /> |
ed9ed1e6cca2
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galaxyp
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diff
changeset
|
249 <scanList count="1"> |
ed9ed1e6cca2
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galaxyp
parents:
diff
changeset
|
250 <cvParam cvRef="MS" accession="MS:1000795" name="no combination" value="" /> |
ed9ed1e6cca2
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galaxyp
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diff
changeset
|
251 <scan instrumentConfigurationRef="IC1"> |
ed9ed1e6cca2
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galaxyp
parents:
diff
changeset
|
252 <referenceableParamGroupRef ref="scan1" /> |
ed9ed1e6cca2
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galaxyp
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diff
changeset
|
253 <cvParam cvRef="IMS" accession="IMS:1000050" name="position x" value="4" /> |
ed9ed1e6cca2
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galaxyp
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diff
changeset
|
254 <cvParam cvRef="IMS" accession="IMS:1000051" name="position y" value="2" /> |
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44a4b31fcbf3
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5
diff
changeset
|
255 <userParam name="3DPositionX" value="4.000000" /> |
44a4b31fcbf3
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changeset
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256 <userParam name="3DPositionY" value="2.000000" /> |
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ed9ed1e6cca2
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galaxyp
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diff
changeset
|
257 </scan> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
changeset
|
258 </scanList> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
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diff
changeset
|
259 <binaryDataArrayList count="2"> |
ed9ed1e6cca2
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galaxyp
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changeset
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260 <binaryDataArray encodedLength="0"> |
ed9ed1e6cca2
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galaxyp
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diff
changeset
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261 <referenceableParamGroupRef ref="mzArray" /> |
ed9ed1e6cca2
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galaxyp
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diff
changeset
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262 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="16" /> |
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galaxyp
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diff
changeset
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ed9ed1e6cca2
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galaxyp
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diff
changeset
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264 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="33596" /> |
ed9ed1e6cca2
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galaxyp
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diff
changeset
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265 <binary /> |
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galaxyp
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diff
changeset
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266 </binaryDataArray> |
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galaxyp
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changeset
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galaxyp
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changeset
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268 <referenceableParamGroupRef ref="intensityArray" /> |
ed9ed1e6cca2
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galaxyp
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changeset
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galaxyp
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changeset
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ed9ed1e6cca2
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galaxyp
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changeset
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galaxyp
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272 <binary /> |
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galaxyp
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273 </binaryDataArray> |
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galaxyp
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galaxyp
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changeset
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275 </spectrum> |
ed9ed1e6cca2
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galaxyp
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changeset
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galaxyp
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changeset
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277 <referenceableParamGroupRef ref="spectrum1" /> |
ed9ed1e6cca2
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galaxyp
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changeset
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galaxyp
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changeset
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galaxyp
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changeset
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280 <scan instrumentConfigurationRef="IC1"> |
ed9ed1e6cca2
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galaxyp
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changeset
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281 <referenceableParamGroupRef ref="scan1" /> |
ed9ed1e6cca2
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galaxyp
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changeset
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ed9ed1e6cca2
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galaxyp
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changeset
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44a4b31fcbf3
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changeset
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changeset
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galaxyp
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changeset
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286 </scan> |
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galaxyp
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diff
changeset
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287 </scanList> |
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galaxyp
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changeset
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galaxyp
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changeset
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galaxyp
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changeset
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290 <referenceableParamGroupRef ref="mzArray" /> |
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galaxyp
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changeset
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galaxyp
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changeset
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galaxyp
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changeset
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galaxyp
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changeset
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galaxyp
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295 </binaryDataArray> |
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galaxyp
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changeset
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galaxyp
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changeset
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297 <referenceableParamGroupRef ref="intensityArray" /> |
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galaxyp
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changeset
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galaxyp
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changeset
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ed9ed1e6cca2
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galaxyp
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changeset
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ed9ed1e6cca2
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galaxyp
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changeset
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301 <binary /> |
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galaxyp
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changeset
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galaxyp
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changeset
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galaxyp
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changeset
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304 </spectrum> |
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galaxyp
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changeset
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galaxyp
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changeset
|
306 <referenceableParamGroupRef ref="spectrum1" /> |
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galaxyp
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changeset
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galaxyp
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changeset
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308 <cvParam cvRef="MS" accession="MS:1000795" name="no combination" value="" /> |
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galaxyp
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changeset
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galaxyp
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changeset
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310 <referenceableParamGroupRef ref="scan1" /> |
ed9ed1e6cca2
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galaxyp
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changeset
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311 <cvParam cvRef="IMS" accession="IMS:1000050" name="position x" value="4" /> |
ed9ed1e6cca2
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galaxyp
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diff
changeset
|
312 <cvParam cvRef="IMS" accession="IMS:1000051" name="position y" value="3" /> |
7
44a4b31fcbf3
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f986c51abe33c7f622d429a3c4a79ee24b33c1f3"
galaxyp
parents:
5
diff
changeset
|
313 <userParam name="3DPositionX" value="4.000000" /> |
44a4b31fcbf3
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f986c51abe33c7f622d429a3c4a79ee24b33c1f3"
galaxyp
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5
diff
changeset
|
314 <userParam name="3DPositionY" value="3.000000" /> |
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ed9ed1e6cca2
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galaxyp
parents:
diff
changeset
|
315 </scan> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
changeset
|
316 </scanList> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
changeset
|
317 <binaryDataArrayList count="2"> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
changeset
|
318 <binaryDataArray encodedLength="0"> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
changeset
|
319 <referenceableParamGroupRef ref="mzArray" /> |
ed9ed1e6cca2
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galaxyp
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diff
changeset
|
320 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="16" /> |
ed9ed1e6cca2
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galaxyp
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diff
changeset
|
321 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="8399" /> |
ed9ed1e6cca2
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galaxyp
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diff
changeset
|
322 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="33596" /> |
ed9ed1e6cca2
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galaxyp
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diff
changeset
|
323 <binary /> |
ed9ed1e6cca2
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galaxyp
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diff
changeset
|
324 </binaryDataArray> |
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galaxyp
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diff
changeset
|
325 <binaryDataArray encodedLength="0"> |
ed9ed1e6cca2
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galaxyp
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diff
changeset
|
326 <referenceableParamGroupRef ref="intensityArray" /> |
ed9ed1e6cca2
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galaxyp
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diff
changeset
|
327 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="302380" /> |
ed9ed1e6cca2
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galaxyp
parents:
diff
changeset
|
328 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="8399" /> |
ed9ed1e6cca2
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galaxyp
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diff
changeset
|
329 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="33596" /> |
ed9ed1e6cca2
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galaxyp
parents:
diff
changeset
|
330 <binary /> |
ed9ed1e6cca2
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galaxyp
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diff
changeset
|
331 </binaryDataArray> |
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galaxyp
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diff
changeset
|
332 </binaryDataArrayList> |
ed9ed1e6cca2
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galaxyp
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diff
changeset
|
333 </spectrum> |
ed9ed1e6cca2
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galaxyp
parents:
diff
changeset
|
334 <spectrum id="Spectrum=10" defaultArrayLength="0" index="10"> |
ed9ed1e6cca2
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galaxyp
parents:
diff
changeset
|
335 <referenceableParamGroupRef ref="spectrum1" /> |
ed9ed1e6cca2
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galaxyp
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diff
changeset
|
336 <scanList count="1"> |
ed9ed1e6cca2
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galaxyp
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diff
changeset
|
337 <cvParam cvRef="MS" accession="MS:1000795" name="no combination" value="" /> |
ed9ed1e6cca2
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galaxyp
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diff
changeset
|
338 <scan instrumentConfigurationRef="IC1"> |
ed9ed1e6cca2
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galaxyp
parents:
diff
changeset
|
339 <referenceableParamGroupRef ref="scan1" /> |
ed9ed1e6cca2
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galaxyp
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diff
changeset
|
340 <cvParam cvRef="IMS" accession="IMS:1000050" name="position x" value="9" /> |
ed9ed1e6cca2
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galaxyp
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diff
changeset
|
341 <cvParam cvRef="IMS" accession="IMS:1000051" name="position y" value="1" /> |
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44a4b31fcbf3
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galaxyp
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5
diff
changeset
|
342 <userParam name="3DPositionX" value="9.000000" /> |
44a4b31fcbf3
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galaxyp
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changeset
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343 <userParam name="3DPositionY" value="1.000000" /> |
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ed9ed1e6cca2
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galaxyp
parents:
diff
changeset
|
344 </scan> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
changeset
|
345 </scanList> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
changeset
|
346 <binaryDataArrayList count="2"> |
ed9ed1e6cca2
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galaxyp
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changeset
|
347 <binaryDataArray encodedLength="0"> |
ed9ed1e6cca2
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galaxyp
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diff
changeset
|
348 <referenceableParamGroupRef ref="mzArray" /> |
ed9ed1e6cca2
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galaxyp
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diff
changeset
|
349 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="16" /> |
ed9ed1e6cca2
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galaxyp
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diff
changeset
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350 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="8399" /> |
ed9ed1e6cca2
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galaxyp
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diff
changeset
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351 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="33596" /> |
ed9ed1e6cca2
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galaxyp
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diff
changeset
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352 <binary /> |
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galaxyp
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diff
changeset
|
353 </binaryDataArray> |
ed9ed1e6cca2
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galaxyp
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changeset
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354 <binaryDataArray encodedLength="0"> |
ed9ed1e6cca2
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galaxyp
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changeset
|
355 <referenceableParamGroupRef ref="intensityArray" /> |
ed9ed1e6cca2
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galaxyp
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changeset
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ed9ed1e6cca2
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galaxyp
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diff
changeset
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357 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="8399" /> |
ed9ed1e6cca2
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galaxyp
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changeset
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358 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="33596" /> |
ed9ed1e6cca2
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galaxyp
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diff
changeset
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359 <binary /> |
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galaxyp
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changeset
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360 </binaryDataArray> |
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galaxyp
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changeset
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361 </binaryDataArrayList> |
ed9ed1e6cca2
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galaxyp
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diff
changeset
|
362 </spectrum> |
ed9ed1e6cca2
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galaxyp
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changeset
|
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ed9ed1e6cca2
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galaxyp
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changeset
|
364 <referenceableParamGroupRef ref="spectrum1" /> |
ed9ed1e6cca2
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galaxyp
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changeset
|
365 <scanList count="1"> |
ed9ed1e6cca2
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galaxyp
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changeset
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366 <cvParam cvRef="MS" accession="MS:1000795" name="no combination" value="" /> |
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galaxyp
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changeset
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367 <scan instrumentConfigurationRef="IC1"> |
ed9ed1e6cca2
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galaxyp
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changeset
|
368 <referenceableParamGroupRef ref="scan1" /> |
ed9ed1e6cca2
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galaxyp
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diff
changeset
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369 <cvParam cvRef="IMS" accession="IMS:1000050" name="position x" value="9" /> |
ed9ed1e6cca2
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galaxyp
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diff
changeset
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44a4b31fcbf3
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galaxyp
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changeset
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371 <userParam name="3DPositionX" value="9.000000" /> |
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changeset
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ed9ed1e6cca2
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galaxyp
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changeset
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373 </scan> |
ed9ed1e6cca2
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galaxyp
parents:
diff
changeset
|
374 </scanList> |
ed9ed1e6cca2
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galaxyp
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changeset
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375 <binaryDataArrayList count="2"> |
ed9ed1e6cca2
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galaxyp
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changeset
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376 <binaryDataArray encodedLength="0"> |
ed9ed1e6cca2
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galaxyp
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changeset
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377 <referenceableParamGroupRef ref="mzArray" /> |
ed9ed1e6cca2
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galaxyp
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diff
changeset
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378 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="16" /> |
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galaxyp
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changeset
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ed9ed1e6cca2
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galaxyp
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changeset
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ed9ed1e6cca2
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galaxyp
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changeset
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381 <binary /> |
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galaxyp
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changeset
|
382 </binaryDataArray> |
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galaxyp
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changeset
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ed9ed1e6cca2
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galaxyp
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changeset
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384 <referenceableParamGroupRef ref="intensityArray" /> |
ed9ed1e6cca2
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galaxyp
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changeset
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ed9ed1e6cca2
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galaxyp
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changeset
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ed9ed1e6cca2
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galaxyp
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changeset
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ed9ed1e6cca2
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galaxyp
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changeset
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388 <binary /> |
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galaxyp
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changeset
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389 </binaryDataArray> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
changeset
|
390 </binaryDataArrayList> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
changeset
|
391 </spectrum> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
changeset
|
392 <spectrum id="Spectrum=12" defaultArrayLength="0" index="12"> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
changeset
|
393 <referenceableParamGroupRef ref="spectrum1" /> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
changeset
|
394 <scanList count="1"> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
changeset
|
395 <cvParam cvRef="MS" accession="MS:1000795" name="no combination" value="" /> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
changeset
|
396 <scan instrumentConfigurationRef="IC1"> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
changeset
|
397 <referenceableParamGroupRef ref="scan1" /> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
changeset
|
398 <cvParam cvRef="IMS" accession="IMS:1000050" name="position x" value="9" /> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
changeset
|
399 <cvParam cvRef="IMS" accession="IMS:1000051" name="position y" value="3" /> |
7
44a4b31fcbf3
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f986c51abe33c7f622d429a3c4a79ee24b33c1f3"
galaxyp
parents:
5
diff
changeset
|
400 <userParam name="3DPositionX" value="9.000000" /> |
44a4b31fcbf3
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit f986c51abe33c7f622d429a3c4a79ee24b33c1f3"
galaxyp
parents:
5
diff
changeset
|
401 <userParam name="3DPositionY" value="3.000000" /> |
5
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
changeset
|
402 </scan> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
changeset
|
403 </scanList> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
changeset
|
404 <binaryDataArrayList count="2"> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
changeset
|
405 <binaryDataArray encodedLength="0"> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
changeset
|
406 <referenceableParamGroupRef ref="mzArray" /> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
changeset
|
407 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="16" /> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
changeset
|
408 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="8399" /> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
changeset
|
409 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="33596" /> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
changeset
|
410 <binary /> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
changeset
|
411 </binaryDataArray> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
changeset
|
412 <binaryDataArray encodedLength="0"> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
changeset
|
413 <referenceableParamGroupRef ref="intensityArray" /> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
changeset
|
414 <cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="403168" /> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
changeset
|
415 <cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="8399" /> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
changeset
|
416 <cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="33596" /> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
changeset
|
417 <binary /> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
changeset
|
418 </binaryDataArray> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
changeset
|
419 </binaryDataArrayList> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
changeset
|
420 </spectrum> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
changeset
|
421 </spectrumList> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
changeset
|
422 </run> |
ed9ed1e6cca2
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 1df4591de435d232862f20669aea529ceb23b12a"
galaxyp
parents:
diff
changeset
|
423 </mzML> |