diff test-data/preprocessing_results2.imzml @ 6:5bf056c0354e draft

"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cardinal commit 15e24b1f0143679647906bc427654f66b417a45c"
author galaxyp
date Wed, 25 Mar 2020 08:13:17 -0400
parents f172efe92629
children 87bb011a4ee8
line wrap: on
line diff
--- a/test-data/preprocessing_results2.imzml	Fri Dec 13 13:57:13 2019 -0500
+++ b/test-data/preprocessing_results2.imzml	Wed Mar 25 08:13:17 2020 -0400
@@ -9,8 +9,8 @@
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@@ -22,19 +22,18 @@
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@@ -43,18 +42,24 @@
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 		<dataProcessing id="CardinalWriteImzML">
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@@ -343,21 +368,23 @@
 						<referenceableParamGroupRef ref="scan1" />
 						<cvParam cvRef="IMS" accession="IMS:1000050" name="position x" value="9" />
 						<cvParam cvRef="IMS" accession="IMS:1000051" name="position y" value="2" />
+						<userParam name="3DPositionX" value="9.000000" />
+						<userParam name="3DPositionY" value="2.000000" />
 					</scan>
 				</scanList>
 				<binaryDataArrayList count="2">
 					<binaryDataArray encodedLength="0">
 						<referenceableParamGroupRef ref="mzArray" />
 						<cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="16" />
-						<cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="1052" />
-						<cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="4208" />
+						<cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="719" />
+						<cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="2876" />
 						<binary />
 					</binaryDataArray>
 					<binaryDataArray encodedLength="0">
 						<referenceableParamGroupRef ref="intensityArray" />
-						<cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="46304" />
-						<cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="1052" />
-						<cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="4208" />
+						<cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="31652" />
+						<cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="719" />
+						<cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="2876" />
 						<binary />
 					</binaryDataArray>
 				</binaryDataArrayList>
@@ -370,21 +397,23 @@
 						<referenceableParamGroupRef ref="scan1" />
 						<cvParam cvRef="IMS" accession="IMS:1000050" name="position x" value="9" />
 						<cvParam cvRef="IMS" accession="IMS:1000051" name="position y" value="3" />
+						<userParam name="3DPositionX" value="9.000000" />
+						<userParam name="3DPositionY" value="3.000000" />
 					</scan>
 				</scanList>
 				<binaryDataArrayList count="2">
 					<binaryDataArray encodedLength="0">
 						<referenceableParamGroupRef ref="mzArray" />
 						<cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="16" />
-						<cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="1052" />
-						<cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="4208" />
+						<cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="719" />
+						<cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="2876" />
 						<binary />
 					</binaryDataArray>
 					<binaryDataArray encodedLength="0">
 						<referenceableParamGroupRef ref="intensityArray" />
-						<cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="50512" />
-						<cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="1052" />
-						<cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="4208" />
+						<cvParam cvRef="IMS" accession="IMS:1000102" name="external offset" value="34528" />
+						<cvParam cvRef="IMS" accession="IMS:1000103" name="external array length" value="719" />
+						<cvParam cvRef="IMS" accession="IMS:1000104" name="external encoded length" value="2876" />
 						<binary />
 					</binaryDataArray>
 				</binaryDataArrayList>