Mercurial > repos > galaxyp > custom_pro_db
comparison customProDB.xml @ 2:2cba79e6037e draft
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/custom_pro_db commit 9910ed076e4b8a3f083351b89fa861d0a4a93beb
| author | galaxyp |
|---|---|
| date | Wed, 17 May 2017 20:23:39 -0400 |
| parents | ad130eaa3a05 |
| children | 344f606eeb9a |
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| 1:ad130eaa3a05 | 2:2cba79e6037e |
|---|---|
| 12 <requirement type="package" version="1.0.2">r-testthat</requirement> | 12 <requirement type="package" version="1.0.2">r-testthat</requirement> |
| 13 <requirement type="package" version="0.1.0">r-getoptlong</requirement> | 13 <requirement type="package" version="0.1.0">r-getoptlong</requirement> |
| 14 <requirement type="package" version="1.1.2">r-stringi</requirement> | 14 <requirement type="package" version="1.1.2">r-stringi</requirement> |
| 15 <requirement type="package" version="1.1.0">r-stringr</requirement> | 15 <requirement type="package" version="1.1.0">r-stringr</requirement> |
| 16 <requirement type="package" version="1.10.0">r-data.table</requirement> | 16 <requirement type="package" version="1.10.0">r-data.table</requirement> |
| 17 <!--<requirement type="package" version="0.4_10">r-sqldf</requirement>--> | 17 <requirement type="package" version="0.4_10">r-sqldf</requirement> |
| 18 <requirement type="package" version="0.6_6">r-gsubfn</requirement> | 18 <requirement type="package" version="0.6_6">r-gsubfn</requirement> |
| 19 <requirement type="package" version="2.3_47">r-chron</requirement> | 19 <requirement type="package" version="2.3_47">r-chron</requirement> |
| 20 <requirement type="package" version="0.3.10">r-proto</requirement> | 20 <requirement type="package" version="0.3.10">r-proto</requirement> |
| 21 <requirement type="package" version="1.8.4">r-plyr</requirement> | 21 <requirement type="package" version="1.8.4">r-plyr</requirement> |
| 22 </requirements> | 22 </requirements> |
| 55 #end if | 55 #end if |
| 56 #if $genome_annotation.cosmic: | 56 #if $genome_annotation.cosmic: |
| 57 --cosmic='$index_path/cosmic.RData' | 57 --cosmic='$index_path/cosmic.RData' |
| 58 #end if | 58 #end if |
| 59 #end if | 59 #end if |
| 60 2>1 | 60 2>&1 |
| 61 ]]> | 61 ]]> |
| 62 </command> | 62 </command> |
| 63 <inputs> | 63 <inputs> |
| 64 <conditional name="genome_annotation"> | 64 <conditional name="genome_annotation"> |
| 65 <param name="source" type="select" label="Will you select a genome annotation from your history or use a built-in annotation?" help="See `Annotations` section of help below"> | 65 <param name="source" type="select" label="Will you select a genome annotation from your history or use a built-in annotation?" help="See `Annotations` section of help below"> |