Mercurial > repos > galaxyp > custom_pro_db_annotation_data_manager
diff ensembl_datasets.loc.sample @ 1:9b4ee836e35b draft
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot/custom_pro_db commit 2174137cf8a15deefed5910ffa152c4ce9c81af6
author | galaxyp |
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date | Thu, 08 Jun 2017 10:55:08 -0400 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/ensembl_datasets.loc.sample Thu Jun 08 10:55:08 2017 -0400 @@ -0,0 +1,113 @@ +aaegypti_gene_ensembl may2009.archive.ensembl.org A.aegypti genes (Ensembl 54 aaegypti) (AaegL1) +amelanoleuca_gene_ensembl may2017.archive.ensembl.org Panda genes (Ensembl 89 amelanoleuca) (ailMel1) +aplatyrhynchos_gene_ensembl may2017.archive.ensembl.org Duck genes (Ensembl 89 aplatyrhynchos) (BGI_duck_1.0) +acarolinensis_gene_ensembl may2017.archive.ensembl.org Anole lizard genes (Ensembl 89 acarolinensis) (AnoCar2.0) +acarolinensis_gene_ensembl may2009.archive.ensembl.org Anole lizard genes (Ensembl 54 acarolinensis) (AnoCar1.0) +agambiae_gene_ensembl may2009.archive.ensembl.org Mosquito genes (Ensembl 54 agambiae) (AgamP3) +amexicanus_gene_ensembl may2017.archive.ensembl.org Cave fish genes (Ensembl 89 amexicanus) (AstMex102) +btaurus_gene_ensembl may2017.archive.ensembl.org Cow genes (Ensembl 89 btaurus) (UMD3.1) +btaurus_gene_ensembl may2009.archive.ensembl.org Cow genes (Ensembl 54 btaurus) (Btau_4.0) +celegans_gene_ensembl may2017.archive.ensembl.org C.elegans genes (Ensembl 89 celegans) (WBcel235) +celegans_gene_ensembl may2012.archive.ensembl.org C.elegans genes (Ensembl 67 celegans) (WBcel215) +celegans_gene_ensembl may2009.archive.ensembl.org C.elegans genes (Ensembl 54 celegans) (WS190) +cjacchus_gene_ensembl may2017.archive.ensembl.org Marmoset genes (Ensembl 89 cjacchus) (C_jacchus3.2.1) +cfamiliaris_gene_ensembl may2017.archive.ensembl.org Dog genes (Ensembl 89 cfamiliaris) (CanFam3.1) +cfamiliaris_gene_ensembl may2012.archive.ensembl.org Dog genes (Ensembl 67 cfamiliaris) (CanFam 2.0) +tsyrichta_gene_ensembl may2017.archive.ensembl.org Tarsier genes (Ensembl 89 tsyrichta) (tarSyr1) +cporcellus_gene_ensembl may2017.archive.ensembl.org Guinea Pig genes (Ensembl 89 cporcellus) (cavPor3) +csabaeus_gene_ensembl may2017.archive.ensembl.org Vervet-AGM genes (Ensembl 89 csabaeus) (ChlSab1.1) +choffmanni_gene_ensembl may2017.archive.ensembl.org Sloth genes (Ensembl 89 choffmanni) (choHof1) +cintestinalis_gene_ensembl may2017.archive.ensembl.org C.intestinalis genes (Ensembl 89 cintestinalis) (KH) +cintestinalis_gene_ensembl may2009.archive.ensembl.org C.intestinalis genes (Ensembl 54 cintestinalis) (JGI 2) +csavignyi_gene_ensembl may2017.archive.ensembl.org C.savignyi genes (Ensembl 89 csavignyi) (CSAV 2.0) +drerio_gene_ensembl may2017.archive.ensembl.org Zebrafish genes (Ensembl 89 drerio) (GRCz10) +drerio_gene_ensembl mar2015.archive.ensembl.org Zebrafish genes (Ensembl 79 drerio) (Zv9) +drerio_gene_ensembl may2009.archive.ensembl.org Zebrafish genes (Ensembl 54 drerio) (Zv8) +dnovemcinctus_gene_ensembl may2017.archive.ensembl.org Armadillo genes (Ensembl 89 dnovemcinctus) (Dasnov3.0) +dnovemcinctus_gene_ensembl may2012.archive.ensembl.org Armadillo genes (Ensembl 67 dnovemcinctus) (dasNov2) +dnovemcinctus_gene_ensembl may2009.archive.ensembl.org Armadillo genes (Ensembl 54 dnovemcinctus) (ARMA) +dordii_gene_ensembl may2017.archive.ensembl.org Kangaroo rat genes (Ensembl 89 dordii) (dipOrd1) +dmelanogaster_gene_ensembl may2017.archive.ensembl.org Fly genes (Ensembl 89 dmelanogaster) (BDGP6) +dmelanogaster_gene_ensembl dec2014.archive.ensembl.org Fly genes (Ensembl 78 dmelanogaster) (BDGP 5) +dmelanogaster_gene_ensembl may2009.archive.ensembl.org Fly genes (Ensembl 54 dmelanogaster) (BDGP 5.4) +etelfairi_gene_ensembl may2017.archive.ensembl.org Tenrec genes (Ensembl 89 etelfairi) (TENREC) +ecaballus_gene_ensembl may2017.archive.ensembl.org Horse genes (Ensembl 89 ecaballus) (Equ Cab 2) +eeuropaeus_gene_ensembl may2017.archive.ensembl.org Hedgehog genes (Ensembl 89 eeuropaeus) (eriEur1) +fcatus_gene_ensembl may2017.archive.ensembl.org Cat genes (Ensembl 89 fcatus) (Felis_catus_6.2) +fcatus_gene_ensembl may2012.archive.ensembl.org Cat genes (Ensembl 67 fcatus) (CAT) +falbicollis_gene_ensembl may2017.archive.ensembl.org Collared flycatcher genes (Ensembl 89 falbicollis) (FicAlb_1.4) +gmorhua_gene_ensembl may2017.archive.ensembl.org Cod genes (Ensembl 89 gmorhua) (gadMor1) +ggallus_gene_ensembl may2017.archive.ensembl.org Chicken genes (Ensembl 89 ggallus) (Gallus_gallus-5.0) +ggallus_gene_ensembl jul2016.archive.ensembl.org Chicken genes (Ensembl 85 ggallus) (Galgal4) +ggallus_gene_ensembl may2012.archive.ensembl.org Chicken genes (Ensembl 67 ggallus) (WASHUC2) +gaculeatus_gene_ensembl may2017.archive.ensembl.org Stickleback genes (Ensembl 89 gaculeatus) (BROAD S1) +ggorilla_gene_ensembl may2017.archive.ensembl.org Gorilla genes (Ensembl 89 ggorilla) (gorGor3.1) +ggorilla_gene_ensembl may2009.archive.ensembl.org Gorilla genes (Ensembl 54 ggorilla) (gorGor1) +hsapiens_gene_ensembl may2017.archive.ensembl.org Human genes (Ensembl 89 hsapiens) (GRCh38.p10) +hsapiens_gene_ensembl mar2017.archive.ensembl.org Human genes (Ensembl 88 hsapiens) (GRCh38.p7) +hsapiens_gene_ensembl mar2016.archive.ensembl.org Human genes (Ensembl 84 hsapiens) (GRCh38.p5) +hsapiens_gene_ensembl sep2015.archive.ensembl.org Human genes (Ensembl 82 hsapiens) (GRCh38.p3) +hsapiens_gene_ensembl may2015.archive.ensembl.org Human genes (Ensembl 80 hsapiens) (GRCh38.p2) +hsapiens_gene_ensembl dec2014.archive.ensembl.org Human genes (Ensembl 78 hsapiens) (GRCh38) +hsapiens_gene_ensembl feb2014.archive.ensembl.org Human genes (Ensembl 75 hsapiens) (GRCh37.p13) +hsapiens_gene_ensembl may2012.archive.ensembl.org Human genes (Ensembl 67 hsapiens) (GRCh37.p7) +hsapiens_gene_ensembl may2009.archive.ensembl.org Human genes (Ensembl 54 hsapiens) (NCBI 36) +itridecemlineatus_gene_ensembl may2017.archive.ensembl.org Squirrel genes (Ensembl 89 itridecemlineatus) (spetri2) +itridecemlineatus_gene_ensembl may2009.archive.ensembl.org Squirrel genes (Ensembl 54 itridecemlineatus) (speTri1) +lchalumnae_gene_ensembl may2017.archive.ensembl.org Coelacanth genes (Ensembl 89 lchalumnae) (LatCha1) +loculatus_gene_ensembl may2017.archive.ensembl.org Spotted gar genes (Ensembl 89 loculatus) (LepOcu1) +lafricana_gene_ensembl may2017.archive.ensembl.org Elephant genes (Ensembl 89 lafricana) (Loxafr3.0) +lafricana_gene_ensembl may2009.archive.ensembl.org Elephant genes (Ensembl 54 lafricana) (BROAD E1) +mmulatta_gene_ensembl may2017.archive.ensembl.org Macaque genes (Ensembl 89 mmulatta) (Mmul_8.0.1) +mmulatta_gene_ensembl jul2016.archive.ensembl.org Macaque genes (Ensembl 85 mmulatta) (MMUL 1.0) +mgallopavo_gene_ensembl may2017.archive.ensembl.org Turkey genes (Ensembl 89 mgallopavo) (Turkey_2.01) +mmurinus_gene_ensembl may2017.archive.ensembl.org Mouse lemur genes (Ensembl 89 mmurinus) (Mmur_2.0) +mmurinus_gene_ensembl jul2016.archive.ensembl.org Mouse lemur genes (Ensembl 85 mmurinus) (micMur1) +mdomestica_gene_ensembl may2017.archive.ensembl.org Opossum genes (Ensembl 89 mdomestica) (monDom5) +mmusculus_gene_ensembl may2017.archive.ensembl.org Mouse genes (Ensembl 89 mmusculus) (GRCm38.p5) +mmusculus_gene_ensembl oct2016.archive.ensembl.org Mouse genes (Ensembl 86 mmusculus) (GRCm38.p4) +mmusculus_gene_ensembl may2015.archive.ensembl.org Mouse genes (Ensembl 80 mmusculus) (GRCm38.p3) +mmusculus_gene_ensembl oct2014.archive.ensembl.org Mouse genes (Ensembl 77 mmusculus) (GRCm38.p2) +mmusculus_gene_ensembl may2012.archive.ensembl.org Mouse genes (Ensembl 67 mmusculus) (NCBI m37) +mfuro_gene_ensembl may2017.archive.ensembl.org Domestic ferret genes (Ensembl 89 mfuro) (MusPutFur1.0) +mlucifugus_gene_ensembl may2017.archive.ensembl.org Microbat genes (Ensembl 89 mlucifugus) (Myoluc2.0) +mlucifugus_gene_ensembl may2009.archive.ensembl.org Microbat genes (Ensembl 54 mlucifugus) (myoLuc1) +nleucogenys_gene_ensembl may2017.archive.ensembl.org Gibbon genes (Ensembl 89 nleucogenys) (Nleu1.0) +meugenii_gene_ensembl may2017.archive.ensembl.org Wallaby genes (Ensembl 89 meugenii) (Meug_1.0) +oprinceps_gene_ensembl may2017.archive.ensembl.org Pika genes (Ensembl 89 oprinceps) (OchPri2.0-Ens) +oprinceps_gene_ensembl mar2017.archive.ensembl.org Pika genes (Ensembl 88 oprinceps) (OchPri2.0) +oniloticus_gene_ensembl may2017.archive.ensembl.org Tilapia genes (Ensembl 89 oniloticus) (Orenil1.0) +oanatinus_gene_ensembl may2017.archive.ensembl.org Platypus genes (Ensembl 89 oanatinus) (OANA5) +ocuniculus_gene_ensembl may2017.archive.ensembl.org Rabbit genes (Ensembl 89 ocuniculus) (OryCun2.0) +ocuniculus_gene_ensembl may2009.archive.ensembl.org Rabbit genes (Ensembl 54 ocuniculus) (RABBIT) +olatipes_gene_ensembl may2017.archive.ensembl.org Medaka genes (Ensembl 89 olatipes) (HdrR) +ogarnettii_gene_ensembl may2017.archive.ensembl.org Bushbaby genes (Ensembl 89 ogarnettii) (OtoGar3) +ogarnettii_gene_ensembl may2009.archive.ensembl.org Bushbaby genes (Ensembl 54 ogarnettii) (otoGar1) +oaries_gene_ensembl may2017.archive.ensembl.org Sheep genes (Ensembl 89 oaries) (Oar_v3.1) +ptroglodytes_gene_ensembl may2017.archive.ensembl.org Chimp genes (Ensembl 89 ptroglodytes) (CHIMP2.1.4) +ptroglodytes_gene_ensembl may2009.archive.ensembl.org Chimp genes (Ensembl 54 ptroglodytes) (CHIMP2.1) +panubis_gene_ensembl may2017.archive.ensembl.org Olive Baboon genes (Ensembl 89 panubis) (PapAnu2.0) +psinensis_gene_ensembl may2017.archive.ensembl.org Chinese softshell turtle genes (Ensembl 89 psinensis) (PelSin_1.0) +pmarinus_gene_ensembl may2017.archive.ensembl.org Lamprey genes (Ensembl 89 pmarinus) (Pmarinus_7.0) +pformosa_gene_ensembl may2017.archive.ensembl.org Amazon molly genes (Ensembl 89 pformosa) (Poecilia_formosa-5.1.2) +pabelii_gene_ensembl may2017.archive.ensembl.org Orangutan genes (Ensembl 89 pabelii) (PPYG2) +pcapensis_gene_ensembl may2017.archive.ensembl.org Rock hyrax genes (Ensembl 89 pcapensis) (proCap1) +pvampyrus_gene_ensembl may2017.archive.ensembl.org Megabat genes (Ensembl 89 pvampyrus) (pteVam1) +rnorvegicus_gene_ensembl may2017.archive.ensembl.org Rat genes (Ensembl 89 rnorvegicus) (Rnor_6.0) +rnorvegicus_gene_ensembl mar2015.archive.ensembl.org Rat genes (Ensembl 79 rnorvegicus) (Rnor_5.0) +rnorvegicus_gene_ensembl may2012.archive.ensembl.org Rat genes (Ensembl 67 rnorvegicus) (RGSC 3.4) +scerevisiae_gene_ensembl may2017.archive.ensembl.org S.cerevisiae genes (Ensembl 89 scerevisiae) (R64-1-1) +scerevisiae_gene_ensembl dec2013.archive.ensembl.org S.cerevisiae genes (Ensembl 74 scerevisiae) (EF 4) +scerevisiae_gene_ensembl may2009.archive.ensembl.org S.cerevisiae genes (Ensembl 54 scerevisiae) (SGD1.01) +sharrisii_gene_ensembl may2017.archive.ensembl.org Tasmanian Devil genes (Ensembl 89 sharrisii) (Devil_ref v7.0) +saraneus_gene_ensembl may2017.archive.ensembl.org Shrew genes (Ensembl 89 saraneus) (sorAra1) +sscrofa_gene_ensembl may2017.archive.ensembl.org Pig genes (Ensembl 89 sscrofa) (Sscrofa10.2) +tguttata_gene_ensembl may2017.archive.ensembl.org Zebra finch genes (Ensembl 89 tguttata) (taeGut3.2.4) +trubripes_gene_ensembl may2017.archive.ensembl.org Fugu genes (Ensembl 89 trubripes) (FUGU 4.0) +tnigroviridis_gene_ensembl may2017.archive.ensembl.org Tetraodon genes (Ensembl 89 tnigroviridis) (TETRAODON 8.0) +tbelangeri_gene_ensembl may2017.archive.ensembl.org Tree Shrew genes (Ensembl 89 tbelangeri) (tupBel1) +ttruncatus_gene_ensembl may2017.archive.ensembl.org Dolphin genes (Ensembl 89 ttruncatus) (turTru1) +vpacos_gene_ensembl may2017.archive.ensembl.org Alpaca genes (Ensembl 89 vpacos) (vicPac1) +xtropicalis_gene_ensembl may2017.archive.ensembl.org Xenopus genes (Ensembl 89 xtropicalis) (JGI 4.2) +xtropicalis_gene_ensembl may2009.archive.ensembl.org Xenopus genes (Ensembl 54 xtropicalis) (JGI 4.1) +xmaculatus_gene_ensembl may2017.archive.ensembl.org Platyfish genes (Ensembl 89 xmaculatus) (Xipmac4.4.2)