comparison data_manager_conf.xml @ 2:3d82020b1e3b draft

"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/eggnog_mapper/eggnog_mapper_data_manager commit fd234f7532b34a1b6ced0d3ac53a8f42348e23f7"

1:077cf0a99144

<?xml version="1.0"?>
<data_managers>
  <data_manager tool_file="data_manager/data_manager_eggnog.xml" id="data_manager_eggnog" >
    <data_table name="eggnog_mapper_db">  <!-- Defines a Data Table to be modified. -->
      <output> <!-- Handle the output of the Data Manager Tool -->
        <column name="value" /> <!-- columns that are going to be specified by the Data Manager Tool -->
        <column name="name" />  <!-- columns that are going to be specified by the Data Manager Tool -->
        <column name="path" output_ref="out_file" >
          <move type="directory" relativize_symlinks="True">
            <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">eggnog_data/${value}</target>
          </move>
          <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/eggnog_data/${value}</value_translation>
          <value_translation type="function">abspath</value_translation>
        </column>
      </output>
    </data_table>
  </data_manager>
</data_managers>

2:3d82020b1e3b

<?xml version="1.0"?>
<data_managers>
  <data_manager tool_file="data_manager/data_manager_eggnog.xml" id="data_manager_eggnog" >
    <data_table name="eggnog_mapper_db_versioned">  <!-- Defines a Data Table to be modified. -->
      <output> <!-- Handle the output of the Data Manager Tool -->
        <column name="value" /> <!-- columns that are going to be specified by the Data Manager Tool -->
        <column name="name" />  <!-- columns that are going to be specified by the Data Manager Tool -->
        <column name="path" output_ref="out_file" >
          <move type="directory" relativize_symlinks="True">
            <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">eggnog_data/${value}</target>
          </move>
          <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/eggnog_data/${value}</value_translation>
          <value_translation type="function">abspath</value_translation>
        </column>
        <column name="version" />
      </output>
    </data_table>
  </data_manager>
</data_managers>