Mercurial > repos > galaxyp > digestdb
changeset 1:60cac732cde4 draft default tip
fixed error in version
| author | galaxyp |
|---|---|
| date | Thu, 20 Jun 2013 16:34:19 -0400 |
| parents | e27d4f0f4b01 |
| children | |
| files | digestdb.xml repository_dependencies.xml tool_dependencies.xml |
| diffstat | 3 files changed, 11 insertions(+), 1 deletions(-) [+] |
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--- a/digestdb.xml Wed Dec 19 00:30:14 2012 -0500 +++ b/digestdb.xml Thu Jun 20 16:34:19 2013 -0400 @@ -1,7 +1,7 @@ <tool id="digestdb" version="0.1.0" name="Digest Database"> <description>Perform a theoretical digest of a protein database.</description> <requirements> - <requirement type="package">transproteomic_pipeline</requirement> + <requirement type="package" version="4.6.1">trans_proteomic_pipeline</requirement> </requirements> <command> digestdb -m$missed_cleavages -l$min_mass -h$max_mass -r${str($enzyme).split(":")[0]} -n${str($enzyme).split(":")[1]} $sequences > $output
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/repository_dependencies.xml Thu Jun 20 16:34:19 2013 -0400 @@ -0,0 +1,4 @@ +<?xml version="1.0"?> +<repositories description="Required proteomics dependencies."> + <repository toolshed="http://toolshed.g2.bx.psu.edu" name="protk_trans_proteomic_pipeline" owner="iracooke" changeset_revision="e85a18371516" /> +</repositories>
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_dependencies.xml Thu Jun 20 16:34:19 2013 -0400 @@ -0,0 +1,6 @@ +<?xml version="1.0"?> +<tool_dependency> + <package name="trans_proteomic_pipeline" version="4.6.1"> + <repository toolshed="http://toolshed.g2.bx.psu.edu" name="protk_trans_proteomic_pipeline" owner="iracooke" changeset_revision="cedd5e884349" /> + </package> +</tool_dependency>