Mercurial > repos > galaxyp > eggnog_mapper
comparison tool-data/eggnog_mapper_db_versioned.loc.sample @ 8:96cac424c870 draft
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/eggnog_mapper/eggnog_mapper commit e45c15081260025e470d23975ef5a734d3f8fc66"
| author | galaxyp |
|---|---|
| date | Tue, 25 Jan 2022 13:51:50 +0000 |
| parents | 4e4c6329f6cd |
| children |
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| 7:4e4c6329f6cd | 8:96cac424c870 |
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| 1 #This is a sample file distributed with Galaxy that enables tools | 1 #This is a sample file distributed with Galaxy that enables tools |
| 2 #to use a directory of eggnog_mapper data files. | 2 #to use a directory of eggnog_mapper data files. |
| 3 # | 3 # |
| 4 # eggnog-mapper requires the following files to be installed in the data directory: | 4 # eggnog-mapper requires the following files to be installed in the data directory: |
| 5 # https://github.com/jhcepas/eggnog-mapper/blob/master/data/og2level.tsv.gz | 5 # https://github.com/jhcepas/eggnog-mapper/blob/master/data/og2level.tsv.gz |
| 6 # http://eggnog5.embl.de/download/emapperdb-5.0.0/eggnog.db.gz | 6 # http://eggnog5.embl.de/download/emapperdb-5.0.2/eggnog.db.gz |
| 7 # A complete diamond database is available from: | 7 # A complete diamond database is available from: |
| 8 # http://eggnog5.embl.de/download/emapperdb-5.0.0/eggnog_proteins.dmnd.gz | 8 # http://eggnog5.embl.de/download/emapperdb-5.0.2/eggnog_proteins.dmnd.gz |
| 9 # | 9 # |
| 10 # The python script download_eggnog_data.py, | 10 # The python script download_eggnog_data.py, |
| 11 # included with eggnog_mapper, can be used to download the files to the correct directory | 11 # included with eggnog_mapper, can be used to download the files to the correct directory |
| 12 # | 12 # |
| 13 # The near-equivalence of columns "value" and "db" is needed for the tests to work, | 13 # The near-equivalence of columns "value" and "db" is needed for the tests to work, |