diff test-data/eggnogg_tiny.sh @ 8:96cac424c870 draft

"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/eggnog_mapper/eggnog_mapper commit e45c15081260025e470d23975ef5a734d3f8fc66"

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/eggnogg_tiny.sh	Tue Jan 25 13:51:50 2022 +0000
@@ -0,0 +1,28 @@
+#!/bin/bash
+
+# Script adapted from https://github.com/galaxyproteomics/egglet to produce a minimal eggnog 5.0.2 database
+
+sqlite3 $1 << "EOF"
+
+CREATE TEMP TABLE og
+AS SELECT * FROM og
+WHERE description = 'Cytidylyltransferase'
+AND level LIKE "651137"
+LIMIT 1;
+
+CREATE TEMP TABLE event
+AS SELECT * FROM event
+WHERE level=651137
+AND og='41T2K'
+LIMIT 20;
+
+CREATE TEMP TABLE prots
+AS SELECT * FROM prots
+WHERE name = "436308.Nmar_0135";
+
+CREATE TEMP TABLE version
+AS SELECT * FROM version;
+
+
+.backup temp eggnog_tiny.db
+EOF