view test-data/make_comp_file.sh @ 10:bcb4895b8b55 draft

planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/eggnog_mapper/eggnog_mapper commit 622d8d475193f3717d26f45fd7c8f5868e9a2d0d

#!/bin/bash

base_path=$1

emapper.py \
    -i $base_path/test-data/nlim_fragment.fasta \
    --output DIA_nlim \
    --output_dir $base_path/test-data \
    --override \
    -m diamond \
    --data_dir $base_path/test-data/cached_locally \
    --no_file_comments \
    --no_annot