Mercurial > repos > galaxyp > flashlfq

comparison flashlfq.xml @ 6:c8ae97f37bf3 draft

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"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/flashlfq commit 0edbb8e74057140f74086694cab070b7b5907220"
author galaxyp
date Wed, 04 Dec 2019 11:44:51 -0500
parents cb346052c5de
children cf494694e8e5
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5:cb346052c5de 6:c8ae97f37bf3
1 <tool id="flashlfq" name="FlashLFQ" version="1.0.0.0"> 1 <tool id="flashlfq" name="FlashLFQ" version="1.0.2.0">
2 <description>ultrafast label-free quantification for mass-spectrometry proteomics</description> 2 <description>ultrafast label-free quantification for mass-spectrometry proteomics</description>
3 <requirements> 3 <requirements>
4 <requirement type="package" version="1.0.0">flashlfq</requirement> 4 <requirement type="package" version="1.0.2">flashlfq</requirement>
5 </requirements> 5 </requirements>
6 <command><![CDATA[ 6 <command><![CDATA[
7 #import re 7 #import re
8 #set $idt_path = $re.sub('\s','_',$re.sub('[.][^.]*$','',$idt.display_name.split('/')[-1])) + ".psmtsv" 8 #set $idt_path = $re.sub('\s','_',$re.sub('[.][^.]*$','',$idt.display_name.split('/')[-1])) + ".psmtsv"
9 ln -s '${idt}' '${idt_path}' && 9 ln -s '${idt}' '${idt_path}' &&