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comparison flashlfq.xml @ 3:ff1148892ce3 draft

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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/flashlfq commit 4b7c3ac13ae2d5d3b18784c580218f39ed7de6e1
author galaxyp
date Fri, 26 Jan 2018 09:08:09 -0500
parents e70198847b2a
children 908ab13490dc
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2:e70198847b2a 3:ff1148892ce3
1 <tool id="flashlfq" name="FlashLFQ" version="0.1.99"> 1 <tool id="flashlfq" name="FlashLFQ" version="0.1.100">
2 <description>ultrafast label-free quantification for mass-spectrometry proteomics</description> 2 <description>ultrafast label-free quantification for mass-spectrometry proteomics</description>
3 <requirements> 3 <requirements>
4 <requirement type="package" version="0.1.99">flashlfq</requirement> 4 <requirement type="package" version="0.1.100">flashlfq</requirement>
5 </requirements> 5 </requirements>
6 <command><![CDATA[ 6 <command><![CDATA[
7 #import re 7 #import re
8 #set $idt_path = $re.sub('\s','_',$re.sub('[.][^.]*$','',$idt.display_name.split('/')[-1])) + ".psmtsv" 8 #set $idt_path = $re.sub('\s','_',$re.sub('[.][^.]*$','',$idt.display_name.split('/')[-1])) + ".psmtsv"
9 ln -s '${idt}' '${idt_path}' && 9 ln -s '${idt}' '${idt_path}' &&