Mercurial > repos > galaxyp > fragpipe
comparison msfragger_macros.xml @ 6:2e667f0ec33c draft
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/fragpipe commit 3fe4cafecf2b25f602915c638b0d6993d957e1e6
| author | galaxyp |
|---|---|
| date | Sun, 30 Mar 2025 23:01:00 +0000 |
| parents | 048390db1932 |
| children | 3f947afe3f71 |
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| 5:048390db1932 | 6:2e667f0ec33c |
|---|---|
| 59 <expand macro="modeling_output"/> | 59 <expand macro="modeling_output"/> |
| 60 <expand macro="advanced_options"/> | 60 <expand macro="advanced_options"/> |
| 61 </xml> | 61 </xml> |
| 62 <xml name="msfragger_nonspecific_HLA"> | 62 <xml name="msfragger_nonspecific_HLA"> |
| 63 <expand macro="search_tolerances" precursor_mass_lower="-20" precursor_mass_upper="20"/> | 63 <expand macro="search_tolerances" precursor_mass_lower="-20" precursor_mass_upper="20"/> |
| 64 <expand macro="digestion" stricttrypsin="false" nonspecific="true" digest_max_length="25" termini_0="true" termini_2="false"/> | 64 <expand macro="digestion" stricttrypsin="false" nonspecific="true" digest_max_length="25" termini_0="true" termini_2="false" digest_mass_range_min="200.0"/> |
| 65 <expand macro="variable_modification"/> | 65 <expand macro="variable_modification"/> |
| 66 <expand macro="static_modification"/> | 66 <expand macro="static_modification"/> |
| 67 <expand macro="glyco_labile"/> | 67 <expand macro="glyco_labile"/> |
| 68 <expand macro="mass_offsets"/> | 68 <expand macro="mass_offsets"/> |
| 69 <expand macro="spectrum_processing" transform_none="false" transform_sqrt="true"/> | 69 <expand macro="spectrum_processing" transform_none="false" transform_sqrt="true"/> |