annotate test-data/201208-378803-cm.pep.xml @ 3:d562ee284f8a draft

planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 82368da0ad9f7dcce4ce99a15c749eed915606ee
author galaxyp
date Thu, 02 Nov 2017 14:15:13 -0400
parents dd33125925d9
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
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1 <?xml version="1.0" encoding="UTF-8"?>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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2 <msms_pipeline_analysis date="2014-09-19T11:13:55" xmlns="http://regis-web.systemsbiology.net/pepXML" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://sashimi.sourceforge.net/schema_revision/pepXML/pepXML_v117.xsd" summary_xml="C:\idpicker\branches\IDPicker-3\TestData\201208-378803.pep.xml">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
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3 <msms_run_summary base_name="C:\idpicker\branches\IDPicker-3\TestData\201208-378803" msManufacturer="unknown" msModel="unknown" raw_data_type="raw" raw_data=".mzML">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
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4 <sample_enzyme name="Trypsin/P">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
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5 <specificity cut="KR" no_cut="-" sense="C"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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6 </sample_enzyme>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
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7 <search_summary base_name="C:\idpicker\branches\IDPicker-3\TestData\201208-378803" search_engine="Comet" search_engine_version="2014.02 rev. 0" precursor_mass_type="monoisotopic" fragment_mass_type="monoisotopic" search_id="1">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
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8 <search_database local_path="cow.protein.PRG2012-subset.fasta" type="AA"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
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9 <enzymatic_search_constraint enzyme="Trypsin/P" max_num_internal_cleavages="2" min_number_termini="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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10 <aminoacid_modification aminoacid="M" massdiff="15.994900" mass="147.035385" variable="Y" symbol="*"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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11 <aminoacid_modification aminoacid="Q" massdiff="-17.026000" mass="111.032578" variable="Y" symbol="#"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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12 <aminoacid_modification aminoacid="Q" massdiff="0.984016" mass="129.042594" variable="Y" symbol="@"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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13 <aminoacid_modification aminoacid="N" massdiff="0.984016" mass="115.026943" variable="Y" symbol="@"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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14 <aminoacid_modification aminoacid="C" massdiff="58.005480" mass="161.014665" variable="N"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
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15 <parameter name="# comet_version " value="2014.02"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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16 <parameter name="activation_method" value="ALL"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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17 <parameter name="add_A_alanine" value="0.000000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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18 <parameter name="add_B_user_amino_acid" value="0.000000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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19 <parameter name="add_C_cysteine" value="58.005480"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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20 <parameter name="add_Cterm_peptide" value="0.000000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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21 <parameter name="add_Cterm_protein" value="0.000000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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22 <parameter name="add_D_aspartic_acid" value="0.000000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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23 <parameter name="add_E_glutamic_acid" value="0.000000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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24 <parameter name="add_F_phenylalanine" value="0.000000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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25 <parameter name="add_G_glycine" value="0.000000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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26 <parameter name="add_H_histidine" value="0.000000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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27 <parameter name="add_I_isoleucine" value="0.000000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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28 <parameter name="add_J_user_amino_acid" value="0.000000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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29 <parameter name="add_K_lysine" value="0.000000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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30 <parameter name="add_L_leucine" value="0.000000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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31 <parameter name="add_M_methionine" value="0.000000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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32 <parameter name="add_N_asparagine" value="0.000000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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33 <parameter name="add_Nterm_peptide" value="0.000000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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34 <parameter name="add_Nterm_protein" value="0.000000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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35 <parameter name="add_O_ornithine" value="0.000000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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36 <parameter name="add_P_proline" value="0.000000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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37 <parameter name="add_Q_glutamine" value="0.000000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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38 <parameter name="add_R_arginine" value="0.000000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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39 <parameter name="add_S_serine" value="0.000000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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40 <parameter name="add_T_threonine" value="0.000000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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41 <parameter name="add_U_user_amino_acid" value="0.000000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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42 <parameter name="add_V_valine" value="0.000000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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43 <parameter name="add_W_tryptophan" value="0.000000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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44 <parameter name="add_X_user_amino_acid" value="0.000000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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45 <parameter name="add_Y_tyrosine" value="0.000000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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46 <parameter name="add_Z_user_amino_acid" value="0.000000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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47 <parameter name="allowed_missed_cleavage" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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48 <parameter name="clear_mz_range" value="0.000000 0.000000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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49 <parameter name="clip_nterm_methionine" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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50 <parameter name="database_name" value="cow.protein.PRG2012-subset.fasta"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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51 <parameter name="decoy_prefix" value="XXX_"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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52 <parameter name="decoy_search" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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53 <parameter name="digest_mass_range" value="600.000000 5000.000000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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54 <parameter name="fragment_bin_offset" value="0.020000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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55 <parameter name="fragment_bin_tol" value="0.020000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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56 <parameter name="isotope_error" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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57 <parameter name="mass_type_fragment" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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58 <parameter name="mass_type_parent" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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59 <parameter name="max_fragment_charge" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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60 <parameter name="max_precursor_charge" value="6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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61 <parameter name="max_variable_mods_in_peptide" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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62 <parameter name="minimum_intensity" value="0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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63 <parameter name="minimum_peaks" value="10"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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64 <parameter name="ms_level" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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65 <parameter name="nucleotide_reading_frame" value="0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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66 <parameter name="num_enzyme_termini" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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67 <parameter name="num_output_lines" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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68 <parameter name="num_results" value="50"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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69 <parameter name="num_threads" value="0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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70 <parameter name="output_outfiles" value="0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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71 <parameter name="output_pepxmlfile" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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72 <parameter name="output_percolatorfile" value="0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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73 <parameter name="output_sqtfile" value="0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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74 <parameter name="output_sqtstream" value="0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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75 <parameter name="output_suffix" value="-cm"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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76 <parameter name="output_txtfile" value="0"/>
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77 <parameter name="override_charge" value="0"/>
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78 <parameter name="peptide_mass_tolerance" value="20.000000"/>
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79 <parameter name="peptide_mass_units" value="2"/>
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80 <parameter name="precursor_charge" value="1 5"/>
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81 <parameter name="print_expect_score" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
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diff changeset
82 <parameter name="remove_precursor_peak" value="0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
83 <parameter name="remove_precursor_tolerance" value="1.500000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
84 <parameter name="sample_enzyme_number" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
85 <parameter name="scan_range" value="0 0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
86 <parameter name="search_enzyme_number" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
87 <parameter name="show_fragment_ions" value="0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
88 <parameter name="skip_researching" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
89 <parameter name="spectrum_batch_size" value="0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
90 <parameter name="theoretical_fragment_ions" value="0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
91 <parameter name="use_A_ions" value="0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
92 <parameter name="use_B_ions" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
93 <parameter name="use_C_ions" value="0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
94 <parameter name="use_NL_ions" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
95 <parameter name="use_X_ions" value="0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
96 <parameter name="use_Y_ions" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
97 <parameter name="use_Z_ions" value="0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
98 <parameter name="use_sparse_matrix" value="0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
99 <parameter name="variable_mod01" value="15.994900 M 0 3 -1 0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
100 <parameter name="variable_mod02" value="-17.026000 Q 0 1 0 0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
101 <parameter name="variable_mod03" value="0.984016 QN 0 3 -1 0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
102 <parameter name="variable_mod04" value="0.000000 X 0 3 -1 0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
103 <parameter name="variable_mod05" value="0.000000 X 0 3 -1 0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
104 <parameter name="variable_mod06" value="0.000000 X 0 3 -1 0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
105 <parameter name="variable_mod07" value="0.000000 X 0 3 -1 0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
106 <parameter name="variable_mod08" value="0.000000 X 0 3 -1 0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
107 <parameter name="variable_mod09" value="0.000000 X 0 3 -1 0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
108 </search_summary>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
109 <spectrum_query spectrum="201208-378803.00001.00001.3" spectrumNativeID="sample=1 period=1 cycle=1181 experiment=2" start_scan="1" end_scan="1" precursor_neutral_mass="1517.212359" assumed_charge="3" index="1" retention_time_sec="614.4">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
110 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
111 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
112 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
113 <spectrum_query spectrum="201208-378803.00001.00001.2" spectrumNativeID="sample=1 period=1 cycle=1181 experiment=2" start_scan="1" end_scan="1" precursor_neutral_mass="1011.474906" assumed_charge="2" index="2" retention_time_sec="614.4">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
114 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
115 <search_hit hit_rank="1" peptide="AEPESDLPR" peptide_prev_aa="H" peptide_next_aa="N" protein="XXX_gi|528920173|ref|XP_001788336.2|" num_tot_proteins="2" num_matched_ions="0" tot_num_ions="16" calc_neutral_pep_mass="1012.482539" massdiff="-1.007633" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="622">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
116 <search_score name="xcorr" value="0.474"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
117 <search_score name="deltacn" value="0.001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
118 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
119 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
120 <search_score name="sprank" value="7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
121 <search_score name="expect" value="9.70E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
122 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
123 <search_hit hit_rank="2" peptide="ASQGMTPFR" peptide_prev_aa="G" peptide_next_aa="S" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="0" tot_num_ions="16" calc_neutral_pep_mass="1009.465100" massdiff="2.009806" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="622">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
124 <modification_info modified_peptide="ASQGM[147]TPFR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
125 <mod_aminoacid_mass position="5" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
126 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
127 <search_score name="xcorr" value="0.473"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
128 <search_score name="deltacn" value="0.043"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
129 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
130 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
131 <search_score name="sprank" value="7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
132 <search_score name="expect" value="9.74E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
133 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
134 <search_hit hit_rank="3" peptide="NESLDLYR" peptide_prev_aa="L" peptide_next_aa="L" protein="XXX_gi|528921178|ref|XP_592304.7|" num_tot_proteins="2" num_matched_ions="1" tot_num_ions="14" calc_neutral_pep_mass="1009.471640" massdiff="2.003266" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="622">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
135 <modification_info modified_peptide="N[115]ESLDLYR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
136 <mod_aminoacid_mass position="1" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
137 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
138 <search_score name="xcorr" value="0.453"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
139 <search_score name="deltacn" value="0.208"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
140 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
141 <search_score name="spscore" value="2.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
142 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
143 <search_score name="expect" value="1.20E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
144 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
145 <search_hit hit_rank="4" peptide="LMQQSSVSK" peptide_prev_aa="I" peptide_next_aa="F" protein="XXX_gi|30466252|ref|NP_848667.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="16" calc_neutral_pep_mass="1008.479763" massdiff="2.995144" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="622">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
146 <modification_info modified_peptide="LMQ[129]Q[129]SSVSK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
147 <mod_aminoacid_mass position="3" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
148 <mod_aminoacid_mass position="4" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
149 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
150 <search_score name="xcorr" value="0.359"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
151 <search_score name="deltacn" value="0.019"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
152 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
153 <search_score name="spscore" value="3.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
154 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
155 <search_score name="expect" value="3.16E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
156 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
157 <search_hit hit_rank="5" peptide="KAMGSNMEK" peptide_prev_aa="K" peptide_next_aa="Q" protein="XXX_gi|358414198|ref|XP_002700672.2|" num_tot_proteins="4" num_matched_ions="0" tot_num_ions="16" calc_neutral_pep_mass="1010.452487" massdiff="1.022420" num_tol_term="2" num_missed_cleavages="1" num_matched_peptides="622">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
158 <modification_info modified_peptide="KAM[147]GSNMEK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
159 <mod_aminoacid_mass position="3" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
160 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
161 <search_score name="xcorr" value="0.352"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
162 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
163 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
164 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
165 <search_score name="sprank" value="7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
166 <search_score name="expect" value="3.39E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
167 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
168 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
169 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
170 <spectrum_query spectrum="201208-378803.00002.00002.2" spectrumNativeID="sample=1 period=1 cycle=1183 experiment=2" start_scan="2" end_scan="2" precursor_neutral_mass="830.315297" assumed_charge="2" index="3" retention_time_sec="617.5">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
171 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
172 <search_hit hit_rank="1" peptide="DGCHWR" peptide_prev_aa="P" peptide_next_aa="G" protein="XXX_gi|528961840|ref|XP_005211303.1|" num_tot_proteins="3" num_matched_ions="0" tot_num_ions="10" calc_neutral_pep_mass="830.312972" massdiff="0.002325" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="76">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
173 <modification_info modified_peptide="DGCHWR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
174 <mod_aminoacid_mass position="3" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
175 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
176 <search_score name="xcorr" value="0.208"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
177 <search_score name="deltacn" value="0.166"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
178 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
179 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
180 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
181 <search_score name="expect" value="1.20E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
182 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
183 <search_hit hit_rank="2" peptide="YYNEDQ" peptide_prev_aa="R" peptide_next_aa="L" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="3" num_matched_ions="0" tot_num_ions="10" calc_neutral_pep_mass="830.308263" massdiff="0.007034" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="76">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
184 <search_score name="xcorr" value="0.173"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
185 <search_score name="deltacn" value="0.133"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
186 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
187 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
188 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
189 <search_score name="expect" value="2.36E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
190 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
191 <search_hit hit_rank="3" peptide="TMEEMR" peptide_prev_aa="F" peptide_next_aa="K" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="0" tot_num_ions="10" calc_neutral_pep_mass="827.315310" massdiff="2.999987" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="76">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
192 <modification_info modified_peptide="TM[147]EEM[147]R">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
193 <mod_aminoacid_mass position="2" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
194 <mod_aminoacid_mass position="5" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
195 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
196 <search_score name="xcorr" value="0.150"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
197 <search_score name="deltacn" value="0.081"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
198 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
199 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
200 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
201 <search_score name="expect" value="3.72E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
202 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
203 <search_hit hit_rank="4" peptide="WHCGDR" peptide_prev_aa="P" peptide_next_aa="G" protein="gi|528961840|ref|XP_005211303.1|" num_tot_proteins="3" num_matched_ions="0" tot_num_ions="10" calc_neutral_pep_mass="830.312972" massdiff="0.002325" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="76">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
204 <modification_info modified_peptide="WHCGDR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
205 <mod_aminoacid_mass position="3" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
206 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
207 <search_score name="xcorr" value="0.138"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
208 <search_score name="deltacn" value="0.035"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
209 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
210 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
211 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
212 <search_score name="expect" value="4.73E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
213 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
214 <search_hit hit_rank="5" peptide="MEEMTR" peptide_prev_aa="F" peptide_next_aa="K" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="0" tot_num_ions="10" calc_neutral_pep_mass="827.315310" massdiff="2.999987" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="76">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
215 <modification_info modified_peptide="M[147]EEM[147]TR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
216 <mod_aminoacid_mass position="1" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
217 <mod_aminoacid_mass position="4" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
218 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
219 <search_score name="xcorr" value="0.133"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
220 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
221 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
222 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
223 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
224 <search_score name="expect" value="5.20E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
225 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
226 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
227 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
228 <spectrum_query spectrum="201208-378803.00002.00002.3" spectrumNativeID="sample=1 period=1 cycle=1183 experiment=2" start_scan="2" end_scan="2" precursor_neutral_mass="1245.472945" assumed_charge="3" index="4" retention_time_sec="617.5">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
229 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
230 <search_hit hit_rank="1" peptide="VNSGCMAMENK" peptide_prev_aa="R" peptide_next_aa="L" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="40" calc_neutral_pep_mass="1242.456662" massdiff="3.016283" num_tol_term="2" num_missed_cleavages="0" num_matched_peptides="54">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
231 <modification_info modified_peptide="VN[115]SGCMAMEN[115]K">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
232 <mod_aminoacid_mass position="2" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
233 <mod_aminoacid_mass position="5" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
234 <mod_aminoacid_mass position="10" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
235 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
236 <search_score name="xcorr" value="0.288"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
237 <search_score name="deltacn" value="0.321"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
238 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
239 <search_score name="spscore" value="0.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
240 <search_score name="sprank" value="6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
241 <search_score name="expect" value="5.57E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
242 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
243 <search_hit hit_rank="2" peptide="MMTDKEADGSE" peptide_prev_aa="R" peptide_next_aa="T" protein="gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="40" calc_neutral_pep_mass="1244.453654" massdiff="1.019291" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="54">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
244 <modification_info modified_peptide="M[147]M[147]TDKEADGSE">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
245 <mod_aminoacid_mass position="1" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
246 <mod_aminoacid_mass position="2" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
247 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
248 <search_score name="xcorr" value="0.196"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
249 <search_score name="deltacn" value="0.168"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
250 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
251 <search_score name="spscore" value="3.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
252 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
253 <search_score name="expect" value="2.71E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
254 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
255 <search_hit hit_rank="3" peptide="MMSASSYNEDL" peptide_prev_aa="R" peptide_next_aa="A" protein="gi|528928354|ref|XP_005193233.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="40" calc_neutral_pep_mass="1246.484589" massdiff="-1.011644" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="54">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
256 <search_score name="xcorr" value="0.163"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
257 <search_score name="deltacn" value="0.284"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
258 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
259 <search_score name="spscore" value="0.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
260 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
261 <search_score name="expect" value="4.75E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
262 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
263 <search_hit hit_rank="4" peptide="PYDDDAEYMK" peptide_prev_aa="K" peptide_next_aa="H" protein="gi|528921178|ref|XP_592304.7|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="36" calc_neutral_pep_mass="1245.485970" massdiff="-0.013025" num_tol_term="2" num_missed_cleavages="0" num_matched_peptides="54">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
264 <search_score name="xcorr" value="0.117"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
265 <search_score name="deltacn" value="0.002"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
266 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
267 <search_score name="spscore" value="0.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
268 <search_score name="sprank" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
269 <search_score name="expect" value="1.05E+002"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
270 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
271 <search_hit hit_rank="5" peptide="CHEVFKQHC" peptide_prev_aa="K" peptide_next_aa="M" protein="XXX_gi|358418103|ref|XP_600387.4|" num_tot_proteins="4" num_matched_ions="1" tot_num_ions="32" calc_neutral_pep_mass="1246.474695" massdiff="-1.001750" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="54">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
272 <modification_info modified_peptide="CHEVFKQ[129]HC">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
273 <mod_aminoacid_mass position="1" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
274 <mod_aminoacid_mass position="7" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
275 <mod_aminoacid_mass position="9" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
276 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
277 <search_score name="xcorr" value="0.116"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
278 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
279 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
280 <search_score name="spscore" value="0.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
281 <search_score name="sprank" value="4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
282 <search_score name="expect" value="1.05E+002"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
283 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
284 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
285 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
286 <spectrum_query spectrum="201208-378803.00003.00003.3" spectrumNativeID="sample=1 period=1 cycle=1186 experiment=2" start_scan="3" end_scan="3" precursor_neutral_mass="1575.554503" assumed_charge="3" index="5" retention_time_sec="621.2">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
287 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
288 <search_hit hit_rank="1" peptide="SSSSASQSNHSCTSM" peptide_prev_aa="R" peptide_next_aa="P" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="0" tot_num_ions="56" calc_neutral_pep_mass="1574.546067" massdiff="1.008437" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="100">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
289 <modification_info modified_peptide="SSSSASQ[129]SNHSCTSM[147]">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
290 <mod_aminoacid_mass position="7" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
291 <mod_aminoacid_mass position="12" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
292 <mod_aminoacid_mass position="15" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
293 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
294 <search_score name="xcorr" value="0.197"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
295 <search_score name="deltacn" value="0.185"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
296 <search_score name="deltacnstar" value="0.003"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
297 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
298 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
299 <search_score name="expect" value="3.11E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
300 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
301 <search_hit hit_rank="2" peptide="SSSSASQSNHSCTSM" peptide_prev_aa="R" peptide_next_aa="P" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="0" tot_num_ions="56" calc_neutral_pep_mass="1574.546067" massdiff="1.008437" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="100">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
302 <modification_info modified_peptide="SSSSASQSN[115]HSCTSM[147]">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
303 <mod_aminoacid_mass position="9" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
304 <mod_aminoacid_mass position="12" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
305 <mod_aminoacid_mass position="15" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
306 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
307 <search_score name="xcorr" value="0.196"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
308 <search_score name="deltacn" value="0.183"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
309 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
310 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
311 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
312 <search_score name="expect" value="3.14E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
313 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
314 <search_hit hit_rank="3" peptide="FNRGCEPCVHHC" peptide_prev_aa="K" peptide_next_aa="Q" protein="XXX_gi|528908812|ref|XP_609847.5|" num_tot_proteins="12" num_matched_ions="0" tot_num_ions="44" calc_neutral_pep_mass="1574.570069" massdiff="0.984434" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="100">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
315 <modification_info modified_peptide="FNRGCEPCVHHC">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
316 <mod_aminoacid_mass position="5" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
317 <mod_aminoacid_mass position="8" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
318 <mod_aminoacid_mass position="12" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
319 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
320 <search_score name="xcorr" value="0.160"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
321 <search_score name="deltacn" value="0.268"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
322 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
323 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
324 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
325 <search_score name="expect" value="5.73E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
326 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
327 <search_hit hit_rank="4" peptide="NCDVQGLEHDMEE" peptide_prev_aa="K" peptide_next_aa="I" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="48" calc_neutral_pep_mass="1575.581738" massdiff="-0.027235" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="100">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
328 <modification_info modified_peptide="NCDVQGLEHDMEE">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
329 <mod_aminoacid_mass position="2" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
330 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
331 <search_score name="xcorr" value="0.117"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
332 <search_score name="deltacn" value="0.114"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
333 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
334 <search_score name="spscore" value="0.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
335 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
336 <search_score name="expect" value="1.18E+002"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
337 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
338 <search_hit hit_rank="5" peptide="FNRGCEPCVHHC" peptide_prev_aa="K" peptide_next_aa="Q" protein="XXX_gi|528908812|ref|XP_609847.5|" num_tot_proteins="12" num_matched_ions="0" tot_num_ions="44" calc_neutral_pep_mass="1575.554085" massdiff="0.000418" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="100">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
339 <modification_info modified_peptide="FN[115]RGCEPCVHHC">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
340 <mod_aminoacid_mass position="2" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
341 <mod_aminoacid_mass position="5" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
342 <mod_aminoacid_mass position="8" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
343 <mod_aminoacid_mass position="12" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
344 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
345 <search_score name="xcorr" value="0.104"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
346 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
347 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
348 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
349 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
350 <search_score name="expect" value="1.47E+002"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
351 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
352 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
353 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
354 <spectrum_query spectrum="201208-378803.00003.00003.2" spectrumNativeID="sample=1 period=1 cycle=1186 experiment=2" start_scan="3" end_scan="3" precursor_neutral_mass="1050.369669" assumed_charge="2" index="6" retention_time_sec="621.2">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
355 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
356 <search_hit hit_rank="1" peptide="MMSASSYNE" peptide_prev_aa="R" peptide_next_aa="D" protein="gi|528928354|ref|XP_005193233.1|" num_tot_proteins="1" num_matched_ions="0" tot_num_ions="16" calc_neutral_pep_mass="1050.363382" massdiff="0.006287" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="2">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
357 <modification_info modified_peptide="M[147]M[147]SASSYNE">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
358 <mod_aminoacid_mass position="1" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
359 <mod_aminoacid_mass position="2" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
360 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
361 <search_score name="xcorr" value="0.051"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
362 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
363 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
364 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
365 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
366 <search_score name="expect" value="2.26E+002"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
367 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
368 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
369 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
370 <spectrum_query spectrum="201208-378803.00004.00004.3" spectrumNativeID="sample=1 period=1 cycle=1187 experiment=2" start_scan="4" end_scan="4" precursor_neutral_mass="1322.050997" assumed_charge="3" index="7" retention_time_sec="623.8">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
371 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
372 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
373 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
374 <spectrum_query spectrum="201208-378803.00004.00004.2" spectrumNativeID="sample=1 period=1 cycle=1187 experiment=2" start_scan="4" end_scan="4" precursor_neutral_mass="881.367331" assumed_charge="2" index="8" retention_time_sec="623.8">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
375 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
376 <search_hit hit_rank="1" peptide="ATGPNTNFG" peptide_prev_aa="K" peptide_next_aa="V" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="16" calc_neutral_pep_mass="879.361028" massdiff="2.006304" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="552">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
377 <modification_info modified_peptide="ATGPN[115]TN[115]FG">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
378 <mod_aminoacid_mass position="5" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
379 <mod_aminoacid_mass position="7" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
380 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
381 <search_score name="xcorr" value="0.350"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
382 <search_score name="deltacn" value="0.059"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
383 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
384 <search_score name="spscore" value="2.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
385 <search_score name="sprank" value="8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
386 <search_score name="expect" value="6.45E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
387 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
388 <search_hit hit_rank="2" peptide="DAMETASR" peptide_prev_aa="K" peptide_next_aa="V" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="14" calc_neutral_pep_mass="879.375631" massdiff="1.991700" num_tol_term="2" num_missed_cleavages="0" num_matched_peptides="552">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
389 <search_score name="xcorr" value="0.329"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
390 <search_score name="deltacn" value="0.094"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
391 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
392 <search_score name="spscore" value="6.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
393 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
394 <search_score name="expect" value="8.76E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
395 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
396 <search_hit hit_rank="3" peptide="DFHSAMR" peptide_prev_aa="F" peptide_next_aa="H" protein="XXX_gi|528968221|ref|XP_005212615.1|" num_tot_proteins="2" num_matched_ions="2" tot_num_ions="12" calc_neutral_pep_mass="878.370472" massdiff="2.996860" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="552">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
397 <modification_info modified_peptide="DFHSAM[147]R">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
398 <mod_aminoacid_mass position="6" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
399 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
400 <search_score name="xcorr" value="0.298"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
401 <search_score name="deltacn" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
402 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
403 <search_score name="spscore" value="6.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
404 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
405 <search_score name="expect" value="1.39E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
406 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
407 <search_hit hit_rank="4" peptide="MGTACVSR" peptide_prev_aa="V" peptide_next_aa="A" protein="gi|139948503|ref|NP_001077142.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="14" calc_neutral_pep_mass="881.373523" massdiff="-0.006192" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="552">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
408 <modification_info modified_peptide="MGTACVSR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
409 <mod_aminoacid_mass position="5" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
410 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
411 <search_score name="xcorr" value="0.298"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
412 <search_score name="deltacn" value="0.135"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
413 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
414 <search_score name="spscore" value="6.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
415 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
416 <search_score name="expect" value="1.39E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
417 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
418 <search_hit hit_rank="5" peptide="AMGSNMEK" peptide_prev_aa="K" peptide_next_aa="K" protein="XXX_gi|358414198|ref|XP_002700672.2|" num_tot_proteins="4" num_matched_ions="0" tot_num_ions="14" calc_neutral_pep_mass="882.357524" massdiff="-0.990192" num_tol_term="2" num_missed_cleavages="0" num_matched_peptides="552">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
419 <modification_info modified_peptide="AM[147]GSNMEK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
420 <mod_aminoacid_mass position="2" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
421 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
422 <search_score name="xcorr" value="0.258"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
423 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
424 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
425 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
426 <search_score name="sprank" value="18"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
427 <search_score name="expect" value="2.51E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
428 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
429 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
430 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
431 <spectrum_query spectrum="201208-378803.00005.00005.2" spectrumNativeID="sample=1 period=1 cycle=1188 experiment=2" start_scan="5" end_scan="5" precursor_neutral_mass="976.317927" assumed_charge="2" index="9" retention_time_sec="626.4">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
432 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
433 <search_hit hit_rank="1" peptide="NEMAMCGK" peptide_prev_aa="S" peptide_next_aa="L" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="14" calc_neutral_pep_mass="973.319076" massdiff="2.998851" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="6">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
434 <modification_info modified_peptide="N[115]EM[147]AM[147]CGK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
435 <mod_aminoacid_mass position="1" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
436 <mod_aminoacid_mass position="3" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
437 <mod_aminoacid_mass position="5" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
438 <mod_aminoacid_mass position="6" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
439 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
440 <search_score name="xcorr" value="0.528"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
441 <search_score name="deltacn" value="0.355"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
442 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
443 <search_score name="spscore" value="8.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
444 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
445 <search_score name="expect" value="1.00E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
446 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
447 <search_hit hit_rank="2" peptide="GCMAMENK" peptide_prev_aa="S" peptide_next_aa="L" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="14" calc_neutral_pep_mass="973.319076" massdiff="2.998851" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="6">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
448 <modification_info modified_peptide="GCM[147]AM[147]EN[115]K">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
449 <mod_aminoacid_mass position="2" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
450 <mod_aminoacid_mass position="3" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
451 <mod_aminoacid_mass position="5" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
452 <mod_aminoacid_mass position="7" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
453 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
454 <search_score name="xcorr" value="0.341"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
455 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
456 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
457 <search_score name="spscore" value="2.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
458 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
459 <search_score name="expect" value="2.21E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
460 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
461 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
462 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
463 <spectrum_query spectrum="201208-378803.00005.00005.3" spectrumNativeID="sample=1 period=1 cycle=1188 experiment=2" start_scan="5" end_scan="5" precursor_neutral_mass="1464.476891" assumed_charge="3" index="10" retention_time_sec="626.4">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
464 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
465 <search_hit hit_rank="1" peptide="NCDVQGLEHDME" peptide_prev_aa="K" peptide_next_aa="E" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="44" calc_neutral_pep_mass="1464.502077" massdiff="-0.025186" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="20">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
466 <modification_info modified_peptide="N[115]CDVQ[129]GLEHDM[147]E">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
467 <mod_aminoacid_mass position="1" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
468 <mod_aminoacid_mass position="2" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
469 <mod_aminoacid_mass position="5" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
470 <mod_aminoacid_mass position="11" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
471 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
472 <search_score name="xcorr" value="0.597"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
473 <search_score name="deltacn" value="0.718"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
474 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
475 <search_score name="spscore" value="2.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
476 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
477 <search_score name="expect" value="1.00E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
478 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
479 <search_hit hit_rank="2" peptide="MDHELGQVDCNE" peptide_prev_aa="K" peptide_next_aa="E" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="0" tot_num_ions="44" calc_neutral_pep_mass="1464.502077" massdiff="-0.025186" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="20">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
480 <modification_info modified_peptide="M[147]DHELGQ[129]VDCN[115]E">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
481 <mod_aminoacid_mass position="1" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
482 <mod_aminoacid_mass position="7" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
483 <mod_aminoacid_mass position="10" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
484 <mod_aminoacid_mass position="11" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
485 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
486 <search_score name="xcorr" value="0.169"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
487 <search_score name="deltacn" value="0.304"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
488 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
489 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
490 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
491 <search_score name="expect" value="8.76E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
492 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
493 <search_hit hit_rank="3" peptide="CSDFCQDDLADD" peptide_prev_aa="K" peptide_next_aa="D" protein="gi|528921178|ref|XP_592304.7|" num_tot_proteins="3" num_matched_ions="0" tot_num_ions="44" calc_neutral_pep_mass="1461.454807" massdiff="3.022084" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="20">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
494 <modification_info modified_peptide="CSDFCQDDLADD">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
495 <mod_aminoacid_mass position="1" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
496 <mod_aminoacid_mass position="5" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
497 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
498 <search_score name="xcorr" value="0.117"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
499 <search_score name="deltacn" value="0.120"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
500 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
501 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
502 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
503 <search_score name="expect" value="1.70E+002"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
504 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
505 <search_hit hit_rank="4" peptide="DALDDQCFDSCD" peptide_prev_aa="K" peptide_next_aa="D" protein="XXX_gi|528921178|ref|XP_592304.7|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="44" calc_neutral_pep_mass="1461.454807" massdiff="3.022084" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="20">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
506 <modification_info modified_peptide="DALDDQCFDSCD">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
507 <mod_aminoacid_mass position="7" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
508 <mod_aminoacid_mass position="11" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
509 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
510 <search_score name="xcorr" value="0.103"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
511 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
512 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
513 <search_score name="spscore" value="0.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
514 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
515 <search_score name="expect" value="2.04E+002"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
516 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
517 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
518 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
519 <spectrum_query spectrum="201208-378803.00006.00006.2" spectrumNativeID="sample=1 period=1 cycle=1188 experiment=3" start_scan="6" end_scan="6" precursor_neutral_mass="855.392468" assumed_charge="2" index="11" retention_time_sec="628.5">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
520 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
521 <search_hit hit_rank="1" peptide="SSHSGERP" peptide_prev_aa="R" peptide_next_aa="F" protein="gi|528908812|ref|XP_609847.5|" num_tot_proteins="12" num_matched_ions="3" tot_num_ions="14" calc_neutral_pep_mass="855.383494" massdiff="0.008974" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="354">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
522 <search_score name="xcorr" value="0.389"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
523 <search_score name="deltacn" value="0.324"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
524 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
525 <search_score name="spscore" value="11.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
526 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
527 <search_score name="expect" value="9.31E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
528 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
529 <search_hit hit_rank="2" peptide="YFWQGR" peptide_prev_aa="V" peptide_next_aa="E" protein="gi|528921178|ref|XP_592304.7|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="10" calc_neutral_pep_mass="855.402773" massdiff="-0.010305" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="354">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
530 <search_score name="xcorr" value="0.263"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
531 <search_score name="deltacn" value="0.057"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
532 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
533 <search_score name="spscore" value="1.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
534 <search_score name="sprank" value="14"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
535 <search_score name="expect" value="4.11E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
536 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
537 <search_hit hit_rank="3" peptide="KNNMFAQ" peptide_prev_aa="R" peptide_next_aa="F" protein="gi|528968106|ref|XP_005212568.1|" num_tot_proteins="2" num_matched_ions="1" tot_num_ions="12" calc_neutral_pep_mass="852.379989" massdiff="3.012479" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="354">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
538 <modification_info modified_peptide="KNNMFAQ[129]">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
539 <mod_aminoacid_mass position="7" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
540 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
541 <search_score name="xcorr" value="0.248"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
542 <search_score name="deltacn" value="0.039"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
543 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
544 <search_score name="spscore" value="6.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
545 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
546 <search_score name="expect" value="4.91E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
547 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
548 <search_hit hit_rank="4" peptide="ISSYDDR" peptide_prev_aa="R" peptide_next_aa="F" protein="gi|528961840|ref|XP_005211303.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="12" calc_neutral_pep_mass="854.377011" massdiff="1.015457" num_tol_term="2" num_missed_cleavages="0" num_matched_peptides="354">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
549 <search_score name="xcorr" value="0.238"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
550 <search_score name="deltacn" value="0.040"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
551 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
552 <search_score name="spscore" value="5.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
553 <search_score name="sprank" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
554 <search_score name="expect" value="5.49E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
555 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
556 <search_hit hit_rank="5" peptide="MAGRLMY" peptide_prev_aa="R" peptide_next_aa="L" protein="XXX_gi|528920173|ref|XP_001788336.2|" num_tot_proteins="2" num_matched_ions="2" tot_num_ions="12" calc_neutral_pep_mass="856.393515" massdiff="-1.001047" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="354">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
557 <modification_info modified_peptide="M[147]AGRLMY">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
558 <mod_aminoacid_mass position="1" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
559 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
560 <search_score name="xcorr" value="0.229"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
561 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
562 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
563 <search_score name="spscore" value="7.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
564 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
565 <search_score name="expect" value="6.15E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
566 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
567 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
568 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
569 <spectrum_query spectrum="201208-378803.00006.00006.3" spectrumNativeID="sample=1 period=1 cycle=1188 experiment=3" start_scan="6" end_scan="6" precursor_neutral_mass="1283.088702" assumed_charge="3" index="12" retention_time_sec="628.5">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
570 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
571 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
572 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
573 <spectrum_query spectrum="201208-378803.00007.00007.2" spectrumNativeID="sample=1 period=1 cycle=1189 experiment=2" start_scan="7" end_scan="7" precursor_neutral_mass="817.363085" assumed_charge="2" index="13" retention_time_sec="631.2">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
574 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
575 <search_hit hit_rank="1" peptide="SNQQQGR" peptide_prev_aa="H" peptide_next_aa="K" protein="gi|528961840|ref|XP_005211303.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="12" calc_neutral_pep_mass="818.351860" massdiff="-0.988775" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="324">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
576 <modification_info modified_peptide="SNQQ[129]Q[129]GR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
577 <mod_aminoacid_mass position="4" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
578 <mod_aminoacid_mass position="5" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
579 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
580 <search_score name="xcorr" value="0.396"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
581 <search_score name="deltacn" value="0.012"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
582 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
583 <search_score name="spscore" value="10.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
584 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
585 <search_score name="expect" value="1.04E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
586 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
587 <search_hit hit_rank="2" peptide="NQSDLKD" peptide_prev_aa="K" peptide_next_aa="L" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="12" calc_neutral_pep_mass="818.377011" massdiff="-1.013927" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="324">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
588 <search_score name="xcorr" value="0.391"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
589 <search_score name="deltacn" value="0.017"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
590 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
591 <search_score name="spscore" value="2.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
592 <search_score name="sprank" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
593 <search_score name="expect" value="1.10E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
594 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
595 <search_hit hit_rank="3" peptide="EQIGENK" peptide_prev_aa="V" peptide_next_aa="Y" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="12" calc_neutral_pep_mass="818.365779" massdiff="-1.002694" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="324">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
596 <modification_info modified_peptide="EQ[129]IGEN[115]K">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
597 <mod_aminoacid_mass position="2" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
598 <mod_aminoacid_mass position="6" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
599 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
600 <search_score name="xcorr" value="0.384"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
601 <search_score name="deltacn" value="0.179"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
602 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
603 <search_score name="spscore" value="8.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
604 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
605 <search_score name="expect" value="1.18E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
606 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
607 <search_hit hit_rank="4" peptide="ELENAKN" peptide_prev_aa="R" peptide_next_aa="M" protein="gi|528921178|ref|XP_592304.7|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="12" calc_neutral_pep_mass="818.365779" massdiff="-1.002694" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="324">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
608 <modification_info modified_peptide="ELEN[115]AKN[115]">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
609 <mod_aminoacid_mass position="4" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
610 <mod_aminoacid_mass position="7" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
611 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
612 <search_score name="xcorr" value="0.315"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
613 <search_score name="deltacn" value="0.106"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
614 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
615 <search_score name="spscore" value="8.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
616 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
617 <search_score name="expect" value="2.58E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
618 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
619 <search_hit hit_rank="5" peptide="ELAEDDK" peptide_prev_aa="V" peptide_next_aa="F" protein="XXX_gi|528969819|ref|XP_005213230.1|" num_tot_proteins="2" num_matched_ions="1" tot_num_ions="12" calc_neutral_pep_mass="818.365778" massdiff="-1.002693" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="324">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
620 <search_score name="xcorr" value="0.282"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
621 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
622 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
623 <search_score name="spscore" value="2.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
624 <search_score name="sprank" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
625 <search_score name="expect" value="3.78E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
626 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
627 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
628 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
629 <spectrum_query spectrum="201208-378803.00007.00007.3" spectrumNativeID="sample=1 period=1 cycle=1189 experiment=2" start_scan="7" end_scan="7" precursor_neutral_mass="1226.044627" assumed_charge="3" index="14" retention_time_sec="631.2">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
630 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
631 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
632 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
633 <spectrum_query spectrum="201208-378803.00008.00008.2" spectrumNativeID="sample=1 period=1 cycle=1191 experiment=2" start_scan="8" end_scan="8" precursor_neutral_mass="869.408037" assumed_charge="2" index="15" retention_time_sec="634.4">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
634 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
635 <search_hit hit_rank="1" peptide="AFMNNKQ" peptide_prev_aa="R" peptide_next_aa="F" protein="XXX_gi|528968106|ref|XP_005212568.1|" num_tot_proteins="2" num_matched_ions="2" tot_num_ions="12" calc_neutral_pep_mass="867.390873" massdiff="2.017165" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="426">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
636 <modification_info modified_peptide="AFM[147]NNKQ">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
637 <mod_aminoacid_mass position="3" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
638 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
639 <search_score name="xcorr" value="0.461"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
640 <search_score name="deltacn" value="0.002"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
641 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
642 <search_score name="spscore" value="14.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
643 <search_score name="sprank" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
644 <search_score name="expect" value="1.01E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
645 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
646 <search_hit hit_rank="2" peptide="EKESMKT" peptide_prev_aa="R" peptide_next_aa="S" protein="XXX_gi|358418103|ref|XP_600387.4|" num_tot_proteins="4" num_matched_ions="2" tot_num_ions="12" calc_neutral_pep_mass="867.400769" massdiff="2.007269" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="426">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
647 <modification_info modified_peptide="EKESM[147]KT">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
648 <mod_aminoacid_mass position="5" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
649 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
650 <search_score name="xcorr" value="0.460"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
651 <search_score name="deltacn" value="0.023"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
652 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
653 <search_score name="spscore" value="16.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
654 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
655 <search_score name="expect" value="1.02E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
656 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
657 <search_hit hit_rank="3" peptide="LEEKHDT" peptide_prev_aa="R" peptide_next_aa="E" protein="XXX_gi|358418103|ref|XP_600387.4|" num_tot_proteins="4" num_matched_ions="2" tot_num_ions="12" calc_neutral_pep_mass="870.408311" massdiff="-1.000274" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="426">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
658 <search_score name="xcorr" value="0.449"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
659 <search_score name="deltacn" value="0.066"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
660 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
661 <search_score name="spscore" value="16.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
662 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
663 <search_score name="expect" value="1.14E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
664 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
665 <search_hit hit_rank="4" peptide="LPPVSCPT" peptide_prev_aa="R" peptide_next_aa="M" protein="gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="14" calc_neutral_pep_mass="870.415706" massdiff="-1.007668" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="426">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
666 <modification_info modified_peptide="LPPVSCPT">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
667 <mod_aminoacid_mass position="6" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
668 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
669 <search_score name="xcorr" value="0.419"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
670 <search_score name="deltacn" value="0.021"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
671 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
672 <search_score name="spscore" value="13.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
673 <search_score name="sprank" value="6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
674 <search_score name="expect" value="1.53E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
675 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
676 <search_hit hit_rank="5" peptide="PCSVPPLT" peptide_prev_aa="R" peptide_next_aa="M" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="14" calc_neutral_pep_mass="870.415706" massdiff="-1.007668" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="426">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
677 <modification_info modified_peptide="PCSVPPLT">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
678 <mod_aminoacid_mass position="2" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
679 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
680 <search_score name="xcorr" value="0.411"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
681 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
682 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
683 <search_score name="spscore" value="23.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
684 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
685 <search_score name="expect" value="1.67E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
686 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
687 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
688 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
689 <spectrum_query spectrum="201208-378803.00008.00008.3" spectrumNativeID="sample=1 period=1 cycle=1191 experiment=2" start_scan="8" end_scan="8" precursor_neutral_mass="1304.112056" assumed_charge="3" index="16" retention_time_sec="634.4">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
690 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
691 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
692 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
693 <spectrum_query spectrum="201208-378803.00009.00009.2" spectrumNativeID="sample=1 period=1 cycle=1191 experiment=3" start_scan="9" end_scan="9" precursor_neutral_mass="799.353321" assumed_charge="2" index="17" retention_time_sec="636.5">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
694 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
695 <search_hit hit_rank="1" peptide="VEDFYQ" peptide_prev_aa="R" peptide_next_aa="K" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="10" calc_neutral_pep_mass="799.338835" massdiff="0.014486" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="236">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
696 <search_score name="xcorr" value="0.664"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
697 <search_score name="deltacn" value="0.532"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
698 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
699 <search_score name="spscore" value="21.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
700 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
701 <search_score name="expect" value="1.00E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
702 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
703 <search_hit hit_rank="2" peptide="YFDEVQ" peptide_prev_aa="R" peptide_next_aa="K" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="10" calc_neutral_pep_mass="799.338835" massdiff="0.014486" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="236">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
704 <search_score name="xcorr" value="0.311"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
705 <search_score name="deltacn" value="0.077"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
706 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
707 <search_score name="spscore" value="3.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
708 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
709 <search_score name="expect" value="7.45E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
710 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
711 <search_hit hit_rank="3" peptide="AICDYR" peptide_prev_aa="K" peptide_next_aa="Q" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="0" tot_num_ions="10" calc_neutral_pep_mass="797.337790" massdiff="2.015531" num_tol_term="2" num_missed_cleavages="0" num_matched_peptides="236">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
712 <modification_info modified_peptide="AICDYR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
713 <mod_aminoacid_mass position="3" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
714 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
715 <search_score name="xcorr" value="0.287"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
716 <search_score name="deltacn" value="0.087"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
717 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
718 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
719 <search_score name="sprank" value="8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
720 <search_score name="expect" value="1.08E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
721 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
722 <search_hit hit_rank="4" peptide="MFAQFR" peptide_prev_aa="N" peptide_next_aa="K" protein="gi|528968106|ref|XP_005212568.1|" num_tot_proteins="2" num_matched_ions="1" tot_num_ions="10" calc_neutral_pep_mass="799.368696" massdiff="-0.015375" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="236">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
723 <modification_info modified_peptide="MFAQ[129]FR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
724 <mod_aminoacid_mass position="4" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
725 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
726 <search_score name="xcorr" value="0.262"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
727 <search_score name="deltacn" value="0.061"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
728 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
729 <search_score name="spscore" value="1.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
730 <search_score name="sprank" value="6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
731 <search_score name="expect" value="1.58E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
732 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
733 <search_hit hit_rank="5" peptide="HEMVER" peptide_prev_aa="K" peptide_next_aa="L" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="10" calc_neutral_pep_mass="799.364672" massdiff="-0.011352" num_tol_term="2" num_missed_cleavages="0" num_matched_peptides="236">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
734 <search_score name="xcorr" value="0.246"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
735 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
736 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
737 <search_score name="spscore" value="5.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
738 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
739 <search_score name="expect" value="2.02E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
740 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
741 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
742 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
743 <spectrum_query spectrum="201208-378803.00009.00009.3" spectrumNativeID="sample=1 period=1 cycle=1191 experiment=3" start_scan="9" end_scan="9" precursor_neutral_mass="1199.029981" assumed_charge="3" index="18" retention_time_sec="636.5">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
744 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
745 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
746 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
747 <spectrum_query spectrum="201208-378803.00010.00010.2" spectrumNativeID="sample=1 period=1 cycle=1192 experiment=2" start_scan="10" end_scan="10" precursor_neutral_mass="884.462788" assumed_charge="2" index="19" retention_time_sec="639.1">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
748 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
749 <search_hit hit_rank="1" peptide="LLYYANK" peptide_prev_aa="E" peptide_next_aa="Y" protein="gi|30794280|ref|NP_851335.1|" num_tot_proteins="1" num_matched_ions="3" tot_num_ions="12" calc_neutral_pep_mass="884.464370" massdiff="-0.001582" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="342">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
750 <modification_info modified_peptide="LLYYAN[115]K">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
751 <mod_aminoacid_mass position="6" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
752 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
753 <search_score name="xcorr" value="0.726"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
754 <search_score name="deltacn" value="0.429"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
755 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
756 <search_score name="spscore" value="24.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
757 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
758 <search_score name="expect" value="1.00E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
759 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
760 <search_hit hit_rank="2" peptide="KLHEIQD" peptide_prev_aa="K" peptide_next_aa="L" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="12" calc_neutral_pep_mass="882.444697" massdiff="2.018091" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="342">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
761 <modification_info modified_peptide="KLHEIQ[129]D">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
762 <mod_aminoacid_mass position="6" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
763 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
764 <search_score name="xcorr" value="0.415"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
765 <search_score name="deltacn" value="0.039"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
766 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
767 <search_score name="spscore" value="3.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
768 <search_score name="sprank" value="8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
769 <search_score name="expect" value="9.76E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
770 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
771 <search_hit hit_rank="3" peptide="AEQLQAIL" peptide_prev_aa="R" peptide_next_aa="L" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="14" calc_neutral_pep_mass="885.480749" massdiff="-1.017960" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="342">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
772 <modification_info modified_peptide="AEQLQ[129]AIL">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
773 <mod_aminoacid_mass position="5" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
774 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
775 <search_score name="xcorr" value="0.399"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
776 <search_score name="deltacn" value="0.029"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
777 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
778 <search_score name="spscore" value="1.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
779 <search_score name="sprank" value="16"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
780 <search_score name="expect" value="1.16E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
781 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
782 <search_hit hit_rank="4" peptide="EAPDLVSR" peptide_prev_aa="D" peptide_next_aa="A" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="14" calc_neutral_pep_mass="885.455596" massdiff="-0.992808" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="342">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
783 <search_score name="xcorr" value="0.387"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
784 <search_score name="deltacn" value="0.049"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
785 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
786 <search_score name="spscore" value="6.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
787 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
788 <search_score name="expect" value="1.31E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
789 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
790 <search_hit hit_rank="5" peptide="AEQLQAIL" peptide_prev_aa="R" peptide_next_aa="L" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="0" tot_num_ions="14" calc_neutral_pep_mass="885.480749" massdiff="-1.017960" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="342">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
791 <modification_info modified_peptide="AEQ[129]LQAIL">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
792 <mod_aminoacid_mass position="3" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
793 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
794 <search_score name="xcorr" value="0.368"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
795 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
796 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
797 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
798 <search_score name="sprank" value="20"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
799 <search_score name="expect" value="1.61E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
800 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
801 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
802 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
803 <spectrum_query spectrum="201208-378803.00010.00010.3" spectrumNativeID="sample=1 period=1 cycle=1192 experiment=2" start_scan="10" end_scan="10" precursor_neutral_mass="1326.694182" assumed_charge="3" index="20" retention_time_sec="639.1">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
804 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
805 <search_hit hit_rank="1" peptide="SARQIMRTAMK" peptide_prev_aa="R" peptide_next_aa="Y" protein="gi|32880221|ref|NP_872593.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="40" calc_neutral_pep_mass="1323.675095" massdiff="3.019087" num_tol_term="2" num_missed_cleavages="2" num_matched_peptides="628">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
806 <modification_info modified_peptide="SARQIM[147]RTAM[147]K">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
807 <mod_aminoacid_mass position="6" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
808 <mod_aminoacid_mass position="10" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
809 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
810 <search_score name="xcorr" value="0.542"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
811 <search_score name="deltacn" value="0.029"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
812 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
813 <search_score name="spscore" value="2.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
814 <search_score name="sprank" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
815 <search_score name="expect" value="6.35E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
816 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
817 <search_hit hit_rank="2" peptide="GDRADKQLVVAR" peptide_prev_aa="R" peptide_next_aa="G" protein="gi|528961840|ref|XP_005211303.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="44" calc_neutral_pep_mass="1327.720813" massdiff="-1.026631" num_tol_term="2" num_missed_cleavages="2" num_matched_peptides="628">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
818 <modification_info modified_peptide="GDRADKQ[129]LVVAR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
819 <mod_aminoacid_mass position="7" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
820 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
821 <search_score name="xcorr" value="0.527"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
822 <search_score name="deltacn" value="0.028"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
823 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
824 <search_score name="spscore" value="4.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
825 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
826 <search_score name="expect" value="7.38E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
827 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
828 <search_hit hit_rank="3" peptide="TLRGCPAINLGR" peptide_prev_aa="A" peptide_next_aa="K" protein="XXX_gi|358418103|ref|XP_600387.4|" num_tot_proteins="4" num_matched_ions="4" tot_num_ions="44" calc_neutral_pep_mass="1327.703054" massdiff="-1.008872" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="628">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
829 <modification_info modified_peptide="TLRGCPAINLGR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
830 <mod_aminoacid_mass position="5" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
831 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
832 <search_score name="xcorr" value="0.512"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
833 <search_score name="deltacn" value="0.071"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
834 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
835 <search_score name="spscore" value="4.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
836 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
837 <search_score name="expect" value="8.50E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
838 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
839 <search_hit hit_rank="4" peptide="ITNIHKLMNAR" peptide_prev_aa="L" peptide_next_aa="H" protein="gi|28849955|ref|NP_788795.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="40" calc_neutral_pep_mass="1326.707791" massdiff="-0.013608" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="628">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
840 <modification_info modified_peptide="ITN[115]IHKLM[147]NAR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
841 <mod_aminoacid_mass position="3" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
842 <mod_aminoacid_mass position="8" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
843 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
844 <search_score name="xcorr" value="0.476"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
845 <search_score name="deltacn" value="0.079"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
846 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
847 <search_score name="spscore" value="2.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
848 <search_score name="sprank" value="7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
849 <search_score name="expect" value="1.21E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
850 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
851 <search_hit hit_rank="5" peptide="DTNRKLQHEGK" peptide_prev_aa="T" peptide_next_aa="E" protein="gi|528968106|ref|XP_005212568.1|" num_tot_proteins="4" num_matched_ions="2" tot_num_ions="40" calc_neutral_pep_mass="1324.684761" massdiff="2.009421" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="628">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
852 <search_score name="xcorr" value="0.438"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
853 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
854 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
855 <search_score name="spscore" value="2.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
856 <search_score name="sprank" value="10"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
857 <search_score name="expect" value="1.74E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
858 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
859 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
860 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
861 <spectrum_query spectrum="201208-378803.00011.00011.3" spectrumNativeID="sample=1 period=1 cycle=1192 experiment=3" start_scan="11" end_scan="11" precursor_neutral_mass="1296.540613" assumed_charge="3" index="21" retention_time_sec="641.2">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
862 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
863 <search_hit hit_rank="1" peptide="QFVSRCSNQIG" peptide_prev_aa="K" peptide_next_aa="G" protein="XXX_gi|529012038|ref|XP_005226889.1|" num_tot_proteins="2" num_matched_ions="4" tot_num_ions="40" calc_neutral_pep_mass="1297.560867" massdiff="-1.020254" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="502">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
864 <modification_info modified_peptide="QFVSRCSN[115]Q[129]IG">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
865 <mod_aminoacid_mass position="6" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
866 <mod_aminoacid_mass position="8" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
867 <mod_aminoacid_mass position="9" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
868 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
869 <search_score name="xcorr" value="0.735"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
870 <search_score name="deltacn" value="0.227"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
871 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
872 <search_score name="spscore" value="18.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
873 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
874 <search_score name="expect" value="3.92E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
875 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
876 <search_hit hit_rank="2" peptide="AAENLQEHQQQ" peptide_prev_aa="R" peptide_next_aa="G" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="40" calc_neutral_pep_mass="1296.558224" massdiff="-0.017611" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="502">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
877 <modification_info modified_peptide="AAENLQ[129]EHQ[129]QQ">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
878 <mod_aminoacid_mass position="6" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
879 <mod_aminoacid_mass position="9" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
880 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
881 <search_score name="xcorr" value="0.569"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
882 <search_score name="deltacn" value="0.044"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
883 <search_score name="deltacnstar" value="0.001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
884 <search_score name="spscore" value="3.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
885 <search_score name="sprank" value="14"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
886 <search_score name="expect" value="1.56E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
887 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
888 <search_hit hit_rank="3" peptide="AAENLQEHQQQ" peptide_prev_aa="R" peptide_next_aa="G" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="40" calc_neutral_pep_mass="1296.558224" massdiff="-0.017611" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="502">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
889 <modification_info modified_peptide="AAENLQ[129]EHQQQ[129]">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
890 <mod_aminoacid_mass position="6" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
891 <mod_aminoacid_mass position="11" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
892 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
893 <search_score name="xcorr" value="0.568"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
894 <search_score name="deltacn" value="0.042"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
895 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
896 <search_score name="spscore" value="3.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
897 <search_score name="sprank" value="14"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
898 <search_score name="expect" value="1.57E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
899 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
900 <search_hit hit_rank="4" peptide="AAENLQEHQQQ" peptide_prev_aa="R" peptide_next_aa="G" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="40" calc_neutral_pep_mass="1296.558224" massdiff="-0.017611" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="502">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
901 <modification_info modified_peptide="AAENLQ[129]EHQQ[129]Q">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
902 <mod_aminoacid_mass position="6" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
903 <mod_aminoacid_mass position="10" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
904 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
905 <search_score name="xcorr" value="0.568"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
906 <search_score name="deltacn" value="0.042"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
907 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
908 <search_score name="spscore" value="3.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
909 <search_score name="sprank" value="14"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
910 <search_score name="expect" value="1.58E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
911 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
912 <search_hit hit_rank="5" peptide="MERAGGQKTGED" peptide_prev_aa="K" peptide_next_aa="L" protein="XXX_gi|528961840|ref|XP_005211303.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="44" calc_neutral_pep_mass="1294.545930" massdiff="1.994684" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="502">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
913 <modification_info modified_peptide="M[147]ERAGGQ[129]KTGED">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
914 <mod_aminoacid_mass position="1" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
915 <mod_aminoacid_mass position="7" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
916 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
917 <search_score name="xcorr" value="0.544"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
918 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
919 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
920 <search_score name="spscore" value="5.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
921 <search_score name="sprank" value="9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
922 <search_score name="expect" value="1.92E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
923 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
924 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
925 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
926 <spectrum_query spectrum="201208-378803.00011.00011.2" spectrumNativeID="sample=1 period=1 cycle=1192 experiment=3" start_scan="11" end_scan="11" precursor_neutral_mass="864.360409" assumed_charge="2" index="22" retention_time_sec="641.2">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
927 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
928 <search_hit hit_rank="1" peptide="AQDDQASK" peptide_prev_aa="D" peptide_next_aa="Q" protein="XXX_gi|528921178|ref|XP_592304.7|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="14" calc_neutral_pep_mass="862.366841" massdiff="1.993568" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="322">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
929 <modification_info modified_peptide="AQDDQ[129]ASK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
930 <mod_aminoacid_mass position="5" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
931 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
932 <search_score name="xcorr" value="0.563"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
933 <search_score name="deltacn" value="0.144"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
934 <search_score name="deltacnstar" value="0.053"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
935 <search_score name="spscore" value="1.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
936 <search_score name="sprank" value="20"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
937 <search_score name="expect" value="4.06E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
938 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
939 <search_hit hit_rank="2" peptide="AQDDQASK" peptide_prev_aa="D" peptide_next_aa="Q" protein="XXX_gi|528921178|ref|XP_592304.7|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="14" calc_neutral_pep_mass="863.350857" massdiff="1.009552" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="322">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
940 <modification_info modified_peptide="AQ[129]DDQ[129]ASK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
941 <mod_aminoacid_mass position="2" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
942 <mod_aminoacid_mass position="5" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
943 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
944 <search_score name="xcorr" value="0.533"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
945 <search_score name="deltacn" value="0.096"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
946 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
947 <search_score name="spscore" value="1.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
948 <search_score name="sprank" value="20"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
949 <search_score name="expect" value="5.39E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
950 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
951 <search_hit hit_rank="3" peptide="TDSNIDVT" peptide_prev_aa="R" peptide_next_aa="T" protein="gi|528928354|ref|XP_005193233.1|" num_tot_proteins="1" num_matched_ions="3" tot_num_ions="14" calc_neutral_pep_mass="864.371258" massdiff="-0.010849" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="322">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
952 <modification_info modified_peptide="TDSN[115]IDVT">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
953 <mod_aminoacid_mass position="4" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
954 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
955 <search_score name="xcorr" value="0.482"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
956 <search_score name="deltacn" value="0.143"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
957 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
958 <search_score name="spscore" value="24.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
959 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
960 <search_score name="expect" value="8.82E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
961 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
962 <search_hit hit_rank="4" peptide="SAQDDQAK" peptide_prev_aa="D" peptide_next_aa="Q" protein="gi|528921178|ref|XP_592304.7|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="14" calc_neutral_pep_mass="862.366841" massdiff="1.993568" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="322">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
963 <modification_info modified_peptide="SAQDDQ[129]AK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
964 <mod_aminoacid_mass position="6" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
965 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
966 <search_score name="xcorr" value="0.413"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
967 <search_score name="deltacn" value="0.026"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
968 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
969 <search_score name="spscore" value="5.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
970 <search_score name="sprank" value="10"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
971 <search_score name="expect" value="1.71E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
972 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
973 <search_hit hit_rank="5" peptide="TDTSSEAR" peptide_prev_aa="E" peptide_next_aa="H" protein="gi|358418103|ref|XP_600387.4|" num_tot_proteins="4" num_matched_ions="2" tot_num_ions="14" calc_neutral_pep_mass="865.377740" massdiff="-1.017331" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="322">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
974 <search_score name="xcorr" value="0.402"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
975 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
976 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
977 <search_score name="spscore" value="9.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
978 <search_score name="sprank" value="7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
979 <search_score name="expect" value="1.89E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
980 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
981 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
982 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
983 <spectrum_query spectrum="201208-378803.00012.00012.3" spectrumNativeID="sample=1 period=1 cycle=1193 experiment=2" start_scan="12" end_scan="12" precursor_neutral_mass="1373.088559" assumed_charge="3" index="23" retention_time_sec="643.9">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
984 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
985 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
986 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
987 <spectrum_query spectrum="201208-378803.00012.00012.2" spectrumNativeID="sample=1 period=1 cycle=1193 experiment=2" start_scan="12" end_scan="12" precursor_neutral_mass="915.392372" assumed_charge="2" index="24" retention_time_sec="643.9">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
988 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
989 <search_hit hit_rank="1" peptide="LDQMVFF" peptide_prev_aa="K" peptide_next_aa="W" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="12" calc_neutral_pep_mass="915.404792" massdiff="-0.012419" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="192">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
990 <modification_info modified_peptide="LDQ[129]M[147]VFF">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
991 <mod_aminoacid_mass position="3" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
992 <mod_aminoacid_mass position="4" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
993 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
994 <search_score name="xcorr" value="0.651"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
995 <search_score name="deltacn" value="0.077"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
996 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
997 <search_score name="spscore" value="32.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
998 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
999 <search_score name="expect" value="2.02E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1000 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1001 <search_hit hit_rank="2" peptide="LDPYHSGQ" peptide_prev_aa="R" peptide_next_aa="L" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="3" tot_num_ions="14" calc_neutral_pep_mass="915.408646" massdiff="-0.016273" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="192">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1002 <search_score name="xcorr" value="0.601"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1003 <search_score name="deltacn" value="0.523"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1004 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1005 <search_score name="spscore" value="26.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1006 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1007 <search_score name="expect" value="2.97E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1008 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1009 <search_hit hit_rank="3" peptide="GEEPNLEQ" peptide_prev_aa="K" peptide_next_aa="M" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="14" calc_neutral_pep_mass="915.382157" massdiff="0.010216" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="192">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1010 <modification_info modified_peptide="GEEPNLEQ[129]">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1011 <mod_aminoacid_mass position="8" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1012 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1013 <search_score name="xcorr" value="0.287"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1014 <search_score name="deltacn" value="0.038"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1015 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1016 <search_score name="spscore" value="0.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1017 <search_score name="sprank" value="12"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1018 <search_score name="expect" value="3.35E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1019 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1020 <search_hit hit_rank="4" peptide="LNTCELY" peptide_prev_aa="R" peptide_next_aa="R" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="12" calc_neutral_pep_mass="913.373901" massdiff="2.018472" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="192">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1021 <modification_info modified_peptide="LN[115]TCELY">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1022 <mod_aminoacid_mass position="2" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1023 <mod_aminoacid_mass position="4" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1024 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1025 <search_score name="xcorr" value="0.276"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1026 <search_score name="deltacn" value="0.021"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1027 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1028 <search_score name="spscore" value="5.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1029 <search_score name="sprank" value="4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1030 <search_score name="expect" value="3.64E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1031 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1032 <search_hit hit_rank="5" peptide="LDPYHSGQ" peptide_prev_aa="R" peptide_next_aa="L" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="14" calc_neutral_pep_mass="916.392662" massdiff="-1.000289" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="192">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1033 <modification_info modified_peptide="LDPYHSGQ[129]">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1034 <mod_aminoacid_mass position="8" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1035 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1036 <search_score name="xcorr" value="0.270"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1037 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1038 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1039 <search_score name="spscore" value="4.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1040 <search_score name="sprank" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1041 <search_score name="expect" value="3.82E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1042 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1043 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1044 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1045 <spectrum_query spectrum="201208-378803.00013.00013.3" spectrumNativeID="sample=1 period=1 cycle=1193 experiment=3" start_scan="13" end_scan="13" precursor_neutral_mass="1560.479001" assumed_charge="3" index="25" retention_time_sec="646.0">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1046 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1047 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1048 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1049 <spectrum_query spectrum="201208-378803.00013.00013.2" spectrumNativeID="sample=1 period=1 cycle=1193 experiment=3" start_scan="13" end_scan="13" precursor_neutral_mass="1040.319334" assumed_charge="2" index="26" retention_time_sec="646.0">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1050 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1051 <search_hit hit_rank="1" peptide="ECCQAEDK" peptide_prev_aa="Q" peptide_next_aa="G" protein="gi|30794280|ref|NP_851335.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="14" calc_neutral_pep_mass="1041.326693" massdiff="-1.007359" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="2">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1052 <modification_info modified_peptide="ECCQ[129]AEDK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1053 <mod_aminoacid_mass position="2" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1054 <mod_aminoacid_mass position="3" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1055 <mod_aminoacid_mass position="4" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1056 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1057 <search_score name="xcorr" value="0.083"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1058 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1059 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1060 <search_score name="spscore" value="2.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1061 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1062 <search_score name="expect" value="1.36E+002"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1063 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1064 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1065 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1066 <spectrum_query spectrum="201208-378803.00014.00014.2" spectrumNativeID="sample=1 period=1 cycle=1194 experiment=2" start_scan="14" end_scan="14" precursor_neutral_mass="902.379908" assumed_charge="2" index="27" retention_time_sec="648.6">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1067 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1068 <search_hit hit_rank="1" peptide="SGAGWTPMP" peptide_prev_aa="-" peptide_next_aa="S" protein="XXX_gi|528961845|ref|XP_005211304.1|" num_tot_proteins="2" num_matched_ions="1" tot_num_ions="16" calc_neutral_pep_mass="902.395638" massdiff="-0.015730" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="164">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1069 <search_score name="xcorr" value="0.348"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1070 <search_score name="deltacn" value="0.252"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1071 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1072 <search_score name="spscore" value="1.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1073 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1074 <search_score name="expect" value="1.60E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1075 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1076 <search_hit hit_rank="2" peptide="SVHEMTNS" peptide_prev_aa="K" peptide_next_aa="S" protein="XXX_gi|27806963|ref|NP_776953.1|" num_tot_proteins="1" num_matched_ions="0" tot_num_ions="14" calc_neutral_pep_mass="903.375631" massdiff="-0.995723" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="164">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1077 <search_score name="xcorr" value="0.261"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1078 <search_score name="deltacn" value="0.074"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1079 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1080 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1081 <search_score name="sprank" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1082 <search_score name="expect" value="7.46E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1083 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1084 <search_hit hit_rank="3" peptide="TSEEMYK" peptide_prev_aa="V" peptide_next_aa="K" protein="gi|528968108|ref|XP_005212569.1|" num_tot_proteins="4" num_matched_ions="1" tot_num_ions="12" calc_neutral_pep_mass="902.369134" massdiff="0.010774" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="164">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1085 <modification_info modified_peptide="TSEEM[147]YK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1086 <mod_aminoacid_mass position="5" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1087 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1088 <search_score name="xcorr" value="0.241"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1089 <search_score name="deltacn" value="0.361"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1090 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1091 <search_score name="spscore" value="3.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1092 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1093 <search_score name="expect" value="1.05E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1094 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1095 <search_hit hit_rank="4" peptide="GSAEGGGSQPG" peptide_prev_aa="R" peptide_next_aa="G" protein="XXX_gi|528961840|ref|XP_005211303.1|" num_tot_proteins="3" num_matched_ions="0" tot_num_ions="20" calc_neutral_pep_mass="902.372989" massdiff="0.006920" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="164">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1096 <search_score name="xcorr" value="0.154"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1097 <search_score name="deltacn" value="0.066"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1098 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1099 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1100 <search_score name="sprank" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1101 <search_score name="expect" value="4.82E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1102 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1103 <search_hit hit_rank="5" peptide="EPPGTQDGV" peptide_prev_aa="R" peptide_next_aa="F" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="16" calc_neutral_pep_mass="899.387242" massdiff="2.992666" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="164">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1104 <modification_info modified_peptide="EPPGTQ[129]DGV">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1105 <mod_aminoacid_mass position="6" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1106 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1107 <search_score name="xcorr" value="0.144"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1108 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1109 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1110 <search_score name="spscore" value="1.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1111 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1112 <search_score name="expect" value="5.77E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1113 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1114 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1115 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1116 <spectrum_query spectrum="201208-378803.00014.00014.3" spectrumNativeID="sample=1 period=1 cycle=1194 experiment=2" start_scan="14" end_scan="14" precursor_neutral_mass="1353.569862" assumed_charge="3" index="28" retention_time_sec="648.6">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1117 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1118 <search_hit hit_rank="1" peptide="DQLQSGKEQCR" peptide_prev_aa="R" peptide_next_aa="W" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="40" calc_neutral_pep_mass="1350.572160" massdiff="2.997702" num_tol_term="2" num_missed_cleavages="1" num_matched_peptides="464">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1119 <modification_info modified_peptide="DQLQ[129]SGKEQ[129]CR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1120 <mod_aminoacid_mass position="4" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1121 <mod_aminoacid_mass position="9" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1122 <mod_aminoacid_mass position="10" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1123 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1124 <search_score name="xcorr" value="0.638"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1125 <search_score name="deltacn" value="0.347"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1126 <search_score name="deltacnstar" value="0.007"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1127 <search_score name="spscore" value="15.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1128 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1129 <search_score name="expect" value="3.05E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1130 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1131 <search_hit hit_rank="2" peptide="DQLQSGKEQCR" peptide_prev_aa="R" peptide_next_aa="W" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="40" calc_neutral_pep_mass="1351.556176" massdiff="2.013686" num_tol_term="2" num_missed_cleavages="1" num_matched_peptides="464">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1132 <modification_info modified_peptide="DQ[129]LQ[129]SGKEQ[129]CR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1133 <mod_aminoacid_mass position="2" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1134 <mod_aminoacid_mass position="4" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1135 <mod_aminoacid_mass position="9" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1136 <mod_aminoacid_mass position="10" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1137 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1138 <search_score name="xcorr" value="0.634"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1139 <search_score name="deltacn" value="0.342"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1140 <search_score name="deltacnstar" value="0.002"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1141 <search_score name="spscore" value="2.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1142 <search_score name="sprank" value="10"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1143 <search_score name="expect" value="3.18E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1144 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1145 <search_hit hit_rank="3" peptide="DQLQSGKEQCR" peptide_prev_aa="R" peptide_next_aa="W" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="40" calc_neutral_pep_mass="1350.572160" massdiff="2.997702" num_tol_term="2" num_missed_cleavages="1" num_matched_peptides="464">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1146 <modification_info modified_peptide="DQ[129]LQ[129]SGKEQCR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1147 <mod_aminoacid_mass position="2" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1148 <mod_aminoacid_mass position="4" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1149 <mod_aminoacid_mass position="10" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1150 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1151 <search_score name="xcorr" value="0.632"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1152 <search_score name="deltacn" value="0.341"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1153 <search_score name="deltacnstar" value="0.013"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1154 <search_score name="spscore" value="2.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1155 <search_score name="sprank" value="10"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1156 <search_score name="expect" value="3.22E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1157 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1158 <search_hit hit_rank="4" peptide="DQLQSGKEQCR" peptide_prev_aa="R" peptide_next_aa="W" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="40" calc_neutral_pep_mass="1350.572160" massdiff="2.997702" num_tol_term="2" num_missed_cleavages="1" num_matched_peptides="464">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1159 <modification_info modified_peptide="DQ[129]LQSGKEQ[129]CR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1160 <mod_aminoacid_mass position="2" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1161 <mod_aminoacid_mass position="9" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1162 <mod_aminoacid_mass position="10" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1163 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1164 <search_score name="xcorr" value="0.624"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1165 <search_score name="deltacn" value="0.332"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1166 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1167 <search_score name="spscore" value="15.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1168 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1169 <search_score name="expect" value="3.48E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1170 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1171 <search_hit hit_rank="5" peptide="QAAENLQEHQQG" peptide_prev_aa="R" peptide_next_aa="I" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="44" calc_neutral_pep_mass="1353.579688" massdiff="-0.009826" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="464">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1172 <modification_info modified_peptide="Q[129]AAENLQEHQ[129]QG">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1173 <mod_aminoacid_mass position="1" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1174 <mod_aminoacid_mass position="10" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1175 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1176 <search_score name="xcorr" value="0.417"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1177 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1178 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1179 <search_score name="spscore" value="3.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1180 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1181 <search_score name="expect" value="2.18E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1182 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1183 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1184 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1185 <spectrum_query spectrum="201208-378803.00015.00015.2" spectrumNativeID="sample=1 period=1 cycle=1196 experiment=2" start_scan="15" end_scan="15" precursor_neutral_mass="816.360402" assumed_charge="2" index="29" retention_time_sec="651.8">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1186 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1187 <search_hit hit_rank="1" peptide="EVMEHR" peptide_prev_aa="K" peptide_next_aa="L" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="10" calc_neutral_pep_mass="815.359572" massdiff="1.000830" num_tol_term="2" num_missed_cleavages="0" num_matched_peptides="194">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1188 <modification_info modified_peptide="EVM[147]EHR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1189 <mod_aminoacid_mass position="3" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1190 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1191 <search_score name="xcorr" value="0.483"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1192 <search_score name="deltacn" value="0.052"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1193 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1194 <search_score name="spscore" value="8.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1195 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1196 <search_score name="expect" value="7.98E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1197 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1198 <search_hit hit_rank="2" peptide="GQQQNSR" peptide_prev_aa="H" peptide_next_aa="K" protein="XXX_gi|528961840|ref|XP_005211303.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="12" calc_neutral_pep_mass="817.367844" massdiff="-1.007442" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="194">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1199 <modification_info modified_peptide="GQ[129]QQNSR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1200 <mod_aminoacid_mass position="2" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1201 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1202 <search_score name="xcorr" value="0.458"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1203 <search_score name="deltacn" value="0.057"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1204 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1205 <search_score name="spscore" value="1.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1206 <search_score name="sprank" value="14"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1207 <search_score name="expect" value="1.01E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1208 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1209 <search_hit hit_rank="3" peptide="SYASSFR" peptide_prev_aa="L" peptide_next_aa="G" protein="XXX_gi|30794280|ref|NP_851335.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="12" calc_neutral_pep_mass="816.376617" massdiff="-0.016215" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="194">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1210 <search_score name="xcorr" value="0.432"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1211 <search_score name="deltacn" value="0.043"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1212 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1213 <search_score name="spscore" value="8.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1214 <search_score name="sprank" value="6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1215 <search_score name="expect" value="1.29E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1216 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1217 <search_hit hit_rank="4" peptide="GQQQNSR" peptide_prev_aa="H" peptide_next_aa="K" protein="XXX_gi|528961840|ref|XP_005211303.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="12" calc_neutral_pep_mass="817.367844" massdiff="-1.007442" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="194">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1218 <modification_info modified_peptide="GQQ[129]QNSR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1219 <mod_aminoacid_mass position="3" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1220 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1221 <search_score name="xcorr" value="0.413"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1222 <search_score name="deltacn" value="0.008"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1223 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1224 <search_score name="spscore" value="1.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1225 <search_score name="sprank" value="14"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1226 <search_score name="expect" value="1.53E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1227 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1228 <search_hit hit_rank="5" peptide="SNQQQGR" peptide_prev_aa="H" peptide_next_aa="K" protein="gi|528961840|ref|XP_005211303.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="12" calc_neutral_pep_mass="817.367844" massdiff="-1.007442" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="194">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1229 <modification_info modified_peptide="SN[115]QQQGR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1230 <mod_aminoacid_mass position="2" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1231 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1232 <search_score name="xcorr" value="0.410"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1233 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1234 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1235 <search_score name="spscore" value="1.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1236 <search_score name="sprank" value="12"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1237 <search_score name="expect" value="1.58E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1238 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1239 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1240 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1241 <spectrum_query spectrum="201208-378803.00015.00015.3" spectrumNativeID="sample=1 period=1 cycle=1196 experiment=2" start_scan="15" end_scan="15" precursor_neutral_mass="1224.540603" assumed_charge="3" index="30" retention_time_sec="651.8">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1242 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1243 <search_hit hit_rank="1" peptide="ENQCTEITAR" peptide_prev_aa="I" peptide_next_aa="E" protein="gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="3" tot_num_ions="36" calc_neutral_pep_mass="1222.513582" massdiff="2.027021" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="694">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1244 <modification_info modified_peptide="EN[115]QCTEITAR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1245 <mod_aminoacid_mass position="2" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1246 <mod_aminoacid_mass position="4" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1247 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1248 <search_score name="xcorr" value="0.830"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1249 <search_score name="deltacn" value="0.108"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1250 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1251 <search_score name="spscore" value="8.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1252 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1253 <search_score name="expect" value="1.97E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1254 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1255 <search_hit hit_rank="2" peptide="SSIMALPCSSVG" peptide_prev_aa="K" peptide_next_aa="D" protein="XXX_gi|528928354|ref|XP_005193233.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="44" calc_neutral_pep_mass="1224.536611" massdiff="0.003992" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="694">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1256 <modification_info modified_peptide="SSIM[147]ALPCSSVG">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1257 <mod_aminoacid_mass position="4" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1258 <mod_aminoacid_mass position="8" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1259 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1260 <search_score name="xcorr" value="0.740"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1261 <search_score name="deltacn" value="0.154"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1262 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1263 <search_score name="spscore" value="5.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1264 <search_score name="sprank" value="9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1265 <search_score name="expect" value="4.12E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1266 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1267 <search_hit hit_rank="3" peptide="SSADSLQAWMK" peptide_prev_aa="Q" peptide_next_aa="A" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="40" calc_neutral_pep_mass="1223.549239" massdiff="0.991364" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="694">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1268 <modification_info modified_peptide="SSADSLQ[129]AWMK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1269 <mod_aminoacid_mass position="7" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1270 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1271 <search_score name="xcorr" value="0.626"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1272 <search_score name="deltacn" value="0.071"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1273 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1274 <search_score name="spscore" value="3.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1275 <search_score name="sprank" value="22"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1276 <search_score name="expect" value="1.06E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1277 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1278 <search_hit hit_rank="4" peptide="DFNPFDTSKGP" peptide_prev_aa="K" peptide_next_aa="G" protein="XXX_gi|30466252|ref|NP_848667.1|" num_tot_proteins="1" num_matched_ions="3" tot_num_ions="40" calc_neutral_pep_mass="1223.545868" massdiff="0.994735" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="694">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1279 <search_score name="xcorr" value="0.582"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1280 <search_score name="deltacn" value="0.008"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1281 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1282 <search_score name="spscore" value="5.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1283 <search_score name="sprank" value="11"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1284 <search_score name="expect" value="1.53E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1285 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1286 <search_hit hit_rank="5" peptide="ENQCTEITAR" peptide_prev_aa="I" peptide_next_aa="E" protein="gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="36" calc_neutral_pep_mass="1222.513582" massdiff="2.027021" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="694">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1287 <modification_info modified_peptide="ENQ[129]CTEITAR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1288 <mod_aminoacid_mass position="3" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1289 <mod_aminoacid_mass position="4" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1290 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1291 <search_score name="xcorr" value="0.577"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1292 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1293 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1294 <search_score name="spscore" value="4.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1295 <search_score name="sprank" value="15"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1296 <search_score name="expect" value="1.60E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1297 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1298 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1299 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1300 <spectrum_query spectrum="201208-378803.00016.00016.2" spectrumNativeID="sample=1 period=1 cycle=1197 experiment=2" start_scan="16" end_scan="16" precursor_neutral_mass="946.406436" assumed_charge="2" index="31" retention_time_sec="654.4">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1301 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1302 <search_hit hit_rank="1" peptide="NKTQHTSM" peptide_prev_aa="K" peptide_next_aa="A" protein="XXX_gi|528908802|ref|XP_005199340.1|" num_tot_proteins="8" num_matched_ions="3" tot_num_ions="14" calc_neutral_pep_mass="946.417831" massdiff="-0.011395" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="216">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1303 <modification_info modified_peptide="N[115]KTQHTSM">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1304 <mod_aminoacid_mass position="1" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1305 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1306 <search_score name="xcorr" value="0.413"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1307 <search_score name="deltacn" value="0.388"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1308 <search_score name="deltacnstar" value="0.185"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1309 <search_score name="spscore" value="33.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1310 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1311 <search_score name="expect" value="6.45E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1312 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1313 <search_hit hit_rank="2" peptide="NKTQHTSM" peptide_prev_aa="K" peptide_next_aa="A" protein="XXX_gi|528908802|ref|XP_005199340.1|" num_tot_proteins="8" num_matched_ions="2" tot_num_ions="14" calc_neutral_pep_mass="946.417831" massdiff="-0.011395" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="216">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1314 <modification_info modified_peptide="NKTQ[129]HTSM">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1315 <mod_aminoacid_mass position="4" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1316 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1317 <search_score name="xcorr" value="0.337"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1318 <search_score name="deltacn" value="0.250"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1319 <search_score name="deltacnstar" value="0.004"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1320 <search_score name="spscore" value="17.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1321 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1322 <search_score name="expect" value="1.54E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1323 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1324 <search_hit hit_rank="3" peptide="NKTQHTSM" peptide_prev_aa="K" peptide_next_aa="A" protein="XXX_gi|528908802|ref|XP_005199340.1|" num_tot_proteins="8" num_matched_ions="2" tot_num_ions="14" calc_neutral_pep_mass="947.401847" massdiff="-0.995411" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="216">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1325 <modification_info modified_peptide="N[115]KTQ[129]HTSM">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1326 <mod_aminoacid_mass position="1" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1327 <mod_aminoacid_mass position="4" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1328 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1329 <search_score name="xcorr" value="0.336"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1330 <search_score name="deltacn" value="0.247"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1331 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1332 <search_score name="spscore" value="11.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1333 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1334 <search_score name="expect" value="1.56E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1335 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1336 <search_hit hit_rank="4" peptide="SIIGGQNEE" peptide_prev_aa="R" peptide_next_aa="V" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="16" calc_neutral_pep_mass="946.424356" massdiff="-0.017920" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="216">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1337 <modification_info modified_peptide="SIIGGQN[115]EE">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1338 <mod_aminoacid_mass position="7" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1339 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1340 <search_score name="xcorr" value="0.253"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1341 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1342 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1343 <search_score name="spscore" value="1.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1344 <search_score name="sprank" value="9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1345 <search_score name="expect" value="4.03E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1346 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1347 <search_hit hit_rank="5" peptide="SIIGGQNEE" peptide_prev_aa="R" peptide_next_aa="V" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="16" calc_neutral_pep_mass="946.424356" massdiff="-0.017920" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="216">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1348 <modification_info modified_peptide="SIIGGQ[129]NEE">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1349 <mod_aminoacid_mass position="6" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1350 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1351 <search_score name="xcorr" value="0.252"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1352 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1353 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1354 <search_score name="spscore" value="1.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1355 <search_score name="sprank" value="9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1356 <search_score name="expect" value="4.05E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1357 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1358 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1359 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1360 <spectrum_query spectrum="201208-378803.00016.00016.3" spectrumNativeID="sample=1 period=1 cycle=1197 experiment=2" start_scan="16" end_scan="16" precursor_neutral_mass="1419.609653" assumed_charge="3" index="32" retention_time_sec="654.4">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1361 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1362 <search_hit hit_rank="1" peptide="SADFGDPADEVLGQ" peptide_prev_aa="R" peptide_next_aa="L" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="4" tot_num_ions="52" calc_neutral_pep_mass="1419.615404" massdiff="-0.005750" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="398">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1363 <search_score name="xcorr" value="1.062"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1364 <search_score name="deltacn" value="0.457"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1365 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1366 <search_score name="spscore" value="20.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1367 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1368 <search_score name="expect" value="2.17E-001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1369 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1370 <search_hit hit_rank="2" peptide="EEVMQGEEPNLK" peptide_prev_aa="E" peptide_next_aa="Y" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="44" calc_neutral_pep_mass="1419.607528" massdiff="0.002126" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="398">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1371 <modification_info modified_peptide="EEVM[147]Q[129]GEEPN[115]LK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1372 <mod_aminoacid_mass position="4" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1373 <mod_aminoacid_mass position="5" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1374 <mod_aminoacid_mass position="10" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1375 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1376 <search_score name="xcorr" value="0.576"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1377 <search_score name="deltacn" value="0.032"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1378 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1379 <search_score name="spscore" value="2.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1380 <search_score name="sprank" value="8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1381 <search_score name="expect" value="1.09E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1382 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1383 <search_hit hit_rank="3" peptide="SADFGDPADEVLGQ" peptide_prev_aa="R" peptide_next_aa="L" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="52" calc_neutral_pep_mass="1420.599420" massdiff="-0.989766" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="398">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1384 <modification_info modified_peptide="SADFGDPADEVLGQ[129]">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1385 <mod_aminoacid_mass position="14" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1386 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1387 <search_score name="xcorr" value="0.558"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1388 <search_score name="deltacn" value="0.084"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1389 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1390 <search_score name="spscore" value="5.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1391 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1392 <search_score name="expect" value="1.26E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1393 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1394 <search_hit hit_rank="4" peptide="LNPEEGQMVEEK" peptide_prev_aa="E" peptide_next_aa="Y" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="44" calc_neutral_pep_mass="1418.623512" massdiff="0.986142" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="398">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1395 <modification_info modified_peptide="LN[115]PEEGQM[147]VEEK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1396 <mod_aminoacid_mass position="2" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1397 <mod_aminoacid_mass position="8" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1398 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1399 <search_score name="xcorr" value="0.511"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1400 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1401 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1402 <search_score name="spscore" value="2.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1403 <search_score name="sprank" value="11"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1404 <search_score name="expect" value="1.84E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1405 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1406 <search_hit hit_rank="5" peptide="LNPEEGQMVEEK" peptide_prev_aa="E" peptide_next_aa="Y" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="44" calc_neutral_pep_mass="1419.607528" massdiff="0.002126" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="398">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1407 <modification_info modified_peptide="LN[115]PEEGQ[129]M[147]VEEK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1408 <mod_aminoacid_mass position="2" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1409 <mod_aminoacid_mass position="7" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1410 <mod_aminoacid_mass position="8" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1411 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1412 <search_score name="xcorr" value="0.500"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1413 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1414 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1415 <search_score name="spscore" value="2.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1416 <search_score name="sprank" value="11"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1417 <search_score name="expect" value="2.00E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1418 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1419 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1420 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1421 <spectrum_query spectrum="201208-378803.00017.00017.2" spectrumNativeID="sample=1 period=1 cycle=1198 experiment=2" start_scan="17" end_scan="17" precursor_neutral_mass="873.371983" assumed_charge="2" index="33" retention_time_sec="657.1">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1422 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1423 <search_hit hit_rank="1" peptide="GVTEHSNQ" peptide_prev_aa="R" peptide_next_aa="Q" protein="gi|528961840|ref|XP_005211303.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="14" calc_neutral_pep_mass="871.367175" massdiff="2.004808" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="242">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1424 <modification_info modified_peptide="GVTEHSN[115]Q">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1425 <mod_aminoacid_mass position="7" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1426 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1427 <search_score name="xcorr" value="0.478"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1428 <search_score name="deltacn" value="0.360"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1429 <search_score name="deltacnstar" value="0.138"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1430 <search_score name="spscore" value="17.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1431 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1432 <search_score name="expect" value="2.27E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1433 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1434 <search_hit hit_rank="2" peptide="GVTEHSNQ" peptide_prev_aa="R" peptide_next_aa="Q" protein="gi|528961840|ref|XP_005211303.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="14" calc_neutral_pep_mass="871.367175" massdiff="2.004808" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="242">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1435 <modification_info modified_peptide="GVTEHSNQ[129]">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1436 <mod_aminoacid_mass position="8" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1437 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1438 <search_score name="xcorr" value="0.412"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1439 <search_score name="deltacn" value="0.257"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1440 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1441 <search_score name="spscore" value="17.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1442 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1443 <search_score name="expect" value="4.96E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1444 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1445 <search_hit hit_rank="3" peptide="YRFGDSQ" peptide_prev_aa="K" peptide_next_aa="Q" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="2" num_matched_ions="1" tot_num_ions="12" calc_neutral_pep_mass="871.382431" massdiff="1.989552" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="242">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1446 <search_score name="xcorr" value="0.306"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1447 <search_score name="deltacn" value="0.251"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1448 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1449 <search_score name="spscore" value="8.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1450 <search_score name="sprank" value="4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1451 <search_score name="expect" value="1.74E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1452 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1453 <search_hit hit_rank="4" peptide="NNMFAQF" peptide_prev_aa="K" peptide_next_aa="R" protein="gi|528968106|ref|XP_005212568.1|" num_tot_proteins="2" num_matched_ions="3" tot_num_ions="12" calc_neutral_pep_mass="871.353440" massdiff="2.018544" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="242">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1454 <modification_info modified_peptide="NNMFAQ[129]F">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1455 <mod_aminoacid_mass position="6" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1456 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1457 <search_score name="xcorr" value="0.229"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1458 <search_score name="deltacn" value="0.038"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1459 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1460 <search_score name="spscore" value="9.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1461 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1462 <search_score name="expect" value="4.34E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1463 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1464 <search_hit hit_rank="5" peptide="ENTAYFQ" peptide_prev_aa="K" peptide_next_aa="F" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="12" calc_neutral_pep_mass="872.355214" massdiff="1.016769" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="242">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1465 <modification_info modified_peptide="EN[115]TAYFQ">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1466 <mod_aminoacid_mass position="2" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1467 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1468 <search_score name="xcorr" value="0.221"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1469 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1470 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1471 <search_score name="spscore" value="1.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1472 <search_score name="sprank" value="10"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1473 <search_score name="expect" value="4.81E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1474 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1475 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1476 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1477 <spectrum_query spectrum="201208-378803.00017.00017.3" spectrumNativeID="sample=1 period=1 cycle=1198 experiment=2" start_scan="17" end_scan="17" precursor_neutral_mass="1310.057975" assumed_charge="3" index="34" retention_time_sec="657.1">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1478 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1479 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1480 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1481 <spectrum_query spectrum="201208-378803.00018.00018.3" spectrumNativeID="sample=1 period=1 cycle=1198 experiment=3" start_scan="18" end_scan="18" precursor_neutral_mass="1836.805069" assumed_charge="3" index="35" retention_time_sec="659.2">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1482 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1483 <search_hit hit_rank="1" peptide="HSGEEADVYRVCEQR" peptide_prev_aa="I" peptide_next_aa="L" protein="gi|528908812|ref|XP_609847.5|" num_tot_proteins="12" num_matched_ions="2" tot_num_ions="56" calc_neutral_pep_mass="1834.790426" massdiff="2.014644" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="644">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1484 <modification_info modified_peptide="HSGEEADVYRVCEQR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1485 <mod_aminoacid_mass position="12" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1486 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1487 <search_score name="xcorr" value="0.546"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1488 <search_score name="deltacn" value="0.167"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1489 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1490 <search_score name="spscore" value="2.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1491 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1492 <search_score name="expect" value="1.60E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1493 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1494 <search_hit hit_rank="2" peptide="KNDECVLEDNSQRTK" peptide_prev_aa="C" peptide_next_aa="W" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="56" calc_neutral_pep_mass="1835.831956" massdiff="0.973113" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="644">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1495 <modification_info modified_peptide="KNDECVLEDNSQRTK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1496 <mod_aminoacid_mass position="5" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1497 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1498 <search_score name="xcorr" value="0.455"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1499 <search_score name="deltacn" value="0.054"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1500 <search_score name="deltacnstar" value="0.001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1501 <search_score name="spscore" value="0.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1502 <search_score name="sprank" value="10"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1503 <search_score name="expect" value="3.35E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1504 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1505 <search_hit hit_rank="3" peptide="KNDECVLEDNSQRTK" peptide_prev_aa="C" peptide_next_aa="W" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="56" calc_neutral_pep_mass="1836.815972" massdiff="-0.010903" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="644">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1506 <modification_info modified_peptide="KN[115]DECVLEDNSQRTK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1507 <mod_aminoacid_mass position="2" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1508 <mod_aminoacid_mass position="5" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1509 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1510 <search_score name="xcorr" value="0.455"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1511 <search_score name="deltacn" value="0.053"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1512 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1513 <search_score name="spscore" value="0.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1514 <search_score name="sprank" value="10"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1515 <search_score name="expect" value="3.36E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1516 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1517 <search_hit hit_rank="4" peptide="GIGELKNEMAMCGSNVQ" peptide_prev_aa="R" peptide_next_aa="F" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="64" calc_neutral_pep_mass="1837.800856" massdiff="-0.995787" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="644">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1518 <modification_info modified_peptide="GIGELKNEMAMCGSNVQ">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1519 <mod_aminoacid_mass position="12" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1520 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1521 <search_score name="xcorr" value="0.430"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1522 <search_score name="deltacn" value="0.037"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1523 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1524 <search_score name="spscore" value="2.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1525 <search_score name="sprank" value="6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1526 <search_score name="expect" value="4.08E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1527 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1528 <search_hit hit_rank="5" peptide="HLFSNCKMSVADLDAQ" peptide_prev_aa="R" peptide_next_aa="S" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="0" tot_num_ions="60" calc_neutral_pep_mass="1836.802236" massdiff="0.002833" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="644">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1529 <modification_info modified_peptide="HLFSNCKMSVADLDAQ[129]">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1530 <mod_aminoacid_mass position="6" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1531 <mod_aminoacid_mass position="16" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1532 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1533 <search_score name="xcorr" value="0.415"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1534 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1535 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1536 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1537 <search_score name="sprank" value="20"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1538 <search_score name="expect" value="4.64E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1539 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1540 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1541 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1542 <spectrum_query spectrum="201208-378803.00018.00018.2" spectrumNativeID="sample=1 period=1 cycle=1198 experiment=3" start_scan="18" end_scan="18" precursor_neutral_mass="1224.536713" assumed_charge="2" index="36" retention_time_sec="659.2">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1543 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1544 <search_hit hit_rank="1" peptide="LNIDSMDCQK" peptide_prev_aa="I" peptide_next_aa="Y" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="0" tot_num_ions="18" calc_neutral_pep_mass="1223.516225" massdiff="1.020488" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="560">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1545 <modification_info modified_peptide="LNIDSMDCQK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1546 <mod_aminoacid_mass position="8" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1547 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1548 <search_score name="xcorr" value="0.339"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1549 <search_score name="deltacn" value="0.085"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1550 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1551 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1552 <search_score name="sprank" value="15"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1553 <search_score name="expect" value="3.83E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1554 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1555 <search_hit hit_rank="2" peptide="ATEGTQLFNDK" peptide_prev_aa="Y" peptide_next_aa="T" protein="XXX_gi|358414198|ref|XP_002700672.2|" num_tot_proteins="4" num_matched_ions="1" tot_num_ions="20" calc_neutral_pep_mass="1224.551013" massdiff="-0.014301" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="560">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1556 <modification_info modified_peptide="ATEGTQ[129]LFN[115]DK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1557 <mod_aminoacid_mass position="6" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1558 <mod_aminoacid_mass position="9" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1559 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1560 <search_score name="xcorr" value="0.310"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1561 <search_score name="deltacn" value="0.047"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1562 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1563 <search_score name="spscore" value="2.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1564 <search_score name="sprank" value="11"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1565 <search_score name="expect" value="5.10E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1566 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1567 <search_hit hit_rank="3" peptide="ARWQEYQSR" peptide_prev_aa="D" peptide_next_aa="V" protein="gi|528944676|ref|XP_005204734.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="16" calc_neutral_pep_mass="1224.552351" massdiff="-0.015638" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="560">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1568 <modification_info modified_peptide="ARWQ[129]EYQ[129]SR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1569 <mod_aminoacid_mass position="4" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1570 <mod_aminoacid_mass position="7" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1571 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1572 <search_score name="xcorr" value="0.295"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1573 <search_score name="deltacn" value="0.007"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1574 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1575 <search_score name="spscore" value="2.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1576 <search_score name="sprank" value="7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1577 <search_score name="expect" value="5.91E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1578 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1579 <search_hit hit_rank="4" peptide="QVSHYRFCK" peptide_prev_aa="P" peptide_next_aa="V" protein="gi|528968108|ref|XP_005212569.1|" num_tot_proteins="4" num_matched_ions="1" tot_num_ions="16" calc_neutral_pep_mass="1225.554994" massdiff="-1.018281" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="560">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1580 <modification_info modified_peptide="Q[129]VSHYRFCK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1581 <mod_aminoacid_mass position="1" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1582 <mod_aminoacid_mass position="8" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1583 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1584 <search_score name="xcorr" value="0.293"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1585 <search_score name="deltacn" value="0.017"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1586 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1587 <search_score name="spscore" value="2.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1588 <search_score name="sprank" value="9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1589 <search_score name="expect" value="6.04E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1590 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1591 <search_hit hit_rank="5" peptide="IDNTPDVMMR" peptide_prev_aa="S" peptide_next_aa="I" protein="XXX_gi|358414198|ref|XP_002700672.2|" num_tot_proteins="4" num_matched_ions="2" tot_num_ions="18" calc_neutral_pep_mass="1222.532179" massdiff="2.004534" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="560">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1592 <modification_info modified_peptide="IDNTPDVM[147]M[147]R">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1593 <mod_aminoacid_mass position="8" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1594 <mod_aminoacid_mass position="9" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1595 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1596 <search_score name="xcorr" value="0.288"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1597 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1598 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1599 <search_score name="spscore" value="7.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1600 <search_score name="sprank" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1601 <search_score name="expect" value="6.35E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1602 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1603 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1604 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1605 <spectrum_query spectrum="201208-378803.00019.00019.3" spectrumNativeID="sample=1 period=1 cycle=1199 experiment=2" start_scan="19" end_scan="19" precursor_neutral_mass="1821.748880" assumed_charge="3" index="37" retention_time_sec="661.8">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1606 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1607 <search_hit hit_rank="1" peptide="DFHPQDNKSDHEHGR" peptide_prev_aa="K" peptide_next_aa="I" protein="gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="56" calc_neutral_pep_mass="1819.751004" massdiff="1.997877" num_tol_term="2" num_missed_cleavages="1" num_matched_peptides="280">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1608 <modification_info modified_peptide="DFHPQ[129]DN[115]KSDHEHGR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1609 <mod_aminoacid_mass position="5" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1610 <mod_aminoacid_mass position="7" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1611 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1612 <search_score name="xcorr" value="0.523"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1613 <search_score name="deltacn" value="0.277"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1614 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1615 <search_score name="spscore" value="0.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1616 <search_score name="sprank" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1617 <search_score name="expect" value="2.84E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1618 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1619 <search_hit hit_rank="2" peptide="FGFGRGCEDCVCPKK" peptide_prev_aa="E" peptide_next_aa="S" protein="XXX_gi|528908812|ref|XP_609847.5|" num_tot_proteins="12" num_matched_ions="3" tot_num_ions="56" calc_neutral_pep_mass="1818.737528" massdiff="3.011352" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="280">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1620 <modification_info modified_peptide="FGFGRGCEDCVCPKK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1621 <mod_aminoacid_mass position="7" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1622 <mod_aminoacid_mass position="10" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1623 <mod_aminoacid_mass position="12" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1624 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1625 <search_score name="xcorr" value="0.379"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1626 <search_score name="deltacn" value="0.016"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1627 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1628 <search_score name="spscore" value="2.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1629 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1630 <search_score name="expect" value="1.25E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1631 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1632 <search_hit hit_rank="3" peptide="FDEEPQKEEAEAAAEQ" peptide_prev_aa="K" peptide_next_aa="C" protein="XXX_gi|528921178|ref|XP_592304.7|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="60" calc_neutral_pep_mass="1821.742850" massdiff="0.006031" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="280">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1633 <modification_info modified_peptide="FDEEPQ[129]KEEAEAAAEQ[129]">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1634 <mod_aminoacid_mass position="6" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1635 <mod_aminoacid_mass position="16" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1636 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1637 <search_score name="xcorr" value="0.373"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1638 <search_score name="deltacn" value="0.064"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1639 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1640 <search_score name="spscore" value="0.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1641 <search_score name="sprank" value="6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1642 <search_score name="expect" value="1.33E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1643 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1644 <search_hit hit_rank="4" peptide="DFHPQDNKSDHEHGR" peptide_prev_aa="K" peptide_next_aa="I" protein="gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="56" calc_neutral_pep_mass="1818.766988" massdiff="2.981893" num_tol_term="2" num_missed_cleavages="1" num_matched_peptides="280">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1645 <modification_info modified_peptide="DFHPQ[129]DNKSDHEHGR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1646 <mod_aminoacid_mass position="5" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1647 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1648 <search_score name="xcorr" value="0.349"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1649 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1650 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1651 <search_score name="spscore" value="0.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1652 <search_score name="sprank" value="11"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1653 <search_score name="expect" value="1.70E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1654 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1655 <search_hit hit_rank="5" peptide="DFHPQDNKSDHEHGR" peptide_prev_aa="K" peptide_next_aa="I" protein="gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="56" calc_neutral_pep_mass="1818.766988" massdiff="2.981893" num_tol_term="2" num_missed_cleavages="1" num_matched_peptides="280">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1656 <modification_info modified_peptide="DFHPQDN[115]KSDHEHGR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1657 <mod_aminoacid_mass position="7" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1658 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1659 <search_score name="xcorr" value="0.334"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1660 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1661 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1662 <search_score name="spscore" value="0.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1663 <search_score name="sprank" value="11"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1664 <search_score name="expect" value="1.98E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1665 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1666 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1667 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1668 <spectrum_query spectrum="201208-378803.00019.00019.2" spectrumNativeID="sample=1 period=1 cycle=1199 experiment=2" start_scan="19" end_scan="19" precursor_neutral_mass="1214.499254" assumed_charge="2" index="38" retention_time_sec="661.8">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1669 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1670 <search_hit hit_rank="1" peptide="TFNLHNSSSFG" peptide_prev_aa="K" peptide_next_aa="Q" protein="gi|28849955|ref|NP_788795.1|" num_tot_proteins="1" num_matched_ions="3" tot_num_ions="20" calc_neutral_pep_mass="1211.509483" massdiff="2.989771" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="158">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1671 <modification_info modified_peptide="TFN[115]LHN[115]SSSFG">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1672 <mod_aminoacid_mass position="3" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1673 <mod_aminoacid_mass position="6" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1674 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1675 <search_score name="xcorr" value="0.357"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1676 <search_score name="deltacn" value="0.222"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1677 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1678 <search_score name="spscore" value="6.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1679 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1680 <search_score name="expect" value="4.32E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1681 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1682 <search_hit hit_rank="2" peptide="DQSDDYEVNK" peptide_prev_aa="F" peptide_next_aa="A" protein="XXX_gi|30466252|ref|NP_848667.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="18" calc_neutral_pep_mass="1212.478242" massdiff="2.021012" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="158">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1683 <modification_info modified_peptide="DQSDDYEVN[115]K">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1684 <mod_aminoacid_mass position="9" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1685 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1686 <search_score name="xcorr" value="0.278"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1687 <search_score name="deltacn" value="0.073"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1688 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1689 <search_score name="spscore" value="1.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1690 <search_score name="sprank" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1691 <search_score name="expect" value="1.40E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1692 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1693 <search_hit hit_rank="3" peptide="YSTHFNQSMV" peptide_prev_aa="K" peptide_next_aa="E" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="18" calc_neutral_pep_mass="1213.507374" massdiff="0.991880" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="158">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1694 <modification_info modified_peptide="YSTHFNQ[129]SMV">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1695 <mod_aminoacid_mass position="7" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1696 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1697 <search_score name="xcorr" value="0.257"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1698 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1699 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1700 <search_score name="spscore" value="0.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1701 <search_score name="sprank" value="9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1702 <search_score name="expect" value="1.89E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1703 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1704 <search_hit hit_rank="4" peptide="YSTHFNQSMV" peptide_prev_aa="K" peptide_next_aa="E" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="18" calc_neutral_pep_mass="1213.507374" massdiff="0.991880" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="158">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1705 <modification_info modified_peptide="YSTHFN[115]QSMV">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1706 <mod_aminoacid_mass position="6" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1707 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1708 <search_score name="xcorr" value="0.257"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1709 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1710 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1711 <search_score name="spscore" value="0.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1712 <search_score name="sprank" value="9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1713 <search_score name="expect" value="1.89E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1714 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1715 <search_hit hit_rank="5" peptide="YSTHFNQSMV" peptide_prev_aa="K" peptide_next_aa="E" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="18" calc_neutral_pep_mass="1214.491390" massdiff="0.007864" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="158">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1716 <modification_info modified_peptide="YSTHFN[115]Q[129]SMV">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1717 <mod_aminoacid_mass position="6" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1718 <mod_aminoacid_mass position="7" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1719 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1720 <search_score name="xcorr" value="0.256"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1721 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1722 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1723 <search_score name="spscore" value="0.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1724 <search_score name="sprank" value="9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1725 <search_score name="expect" value="1.93E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1726 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1727 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1728 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1729 <spectrum_query spectrum="201208-378803.00020.00020.3" spectrumNativeID="sample=1 period=1 cycle=1199 experiment=3" start_scan="20" end_scan="20" precursor_neutral_mass="1482.533961" assumed_charge="3" index="39" retention_time_sec="664.0">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1730 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1731 <search_hit hit_rank="1" peptide="NDECVLEDNSQR" peptide_prev_aa="K" peptide_next_aa="T" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="44" calc_neutral_pep_mass="1481.546400" massdiff="0.987562" num_tol_term="2" num_missed_cleavages="0" num_matched_peptides="60">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1732 <modification_info modified_peptide="N[115]DECVLEDN[115]SQ[129]R">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1733 <mod_aminoacid_mass position="1" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1734 <mod_aminoacid_mass position="4" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1735 <mod_aminoacid_mass position="9" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1736 <mod_aminoacid_mass position="11" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1737 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1738 <search_score name="xcorr" value="0.451"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1739 <search_score name="deltacn" value="0.192"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1740 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1741 <search_score name="spscore" value="1.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1742 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1743 <search_score name="expect" value="1.20E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1744 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1745 <search_hit hit_rank="2" peptide="QSNDELVCEDNR" peptide_prev_aa="K" peptide_next_aa="T" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="44" calc_neutral_pep_mass="1481.546400" massdiff="0.987562" num_tol_term="2" num_missed_cleavages="0" num_matched_peptides="60">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1746 <modification_info modified_peptide="Q[129]SN[115]DELVCEDN[115]R">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1747 <mod_aminoacid_mass position="1" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1748 <mod_aminoacid_mass position="3" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1749 <mod_aminoacid_mass position="8" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1750 <mod_aminoacid_mass position="11" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1751 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1752 <search_score name="xcorr" value="0.365"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1753 <search_score name="deltacn" value="0.158"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1754 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1755 <search_score name="spscore" value="3.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1756 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1757 <search_score name="expect" value="2.63E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1758 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1759 <search_hit hit_rank="3" peptide="VCSDQHYNTEQT" peptide_prev_aa="R" peptide_next_aa="S" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="44" calc_neutral_pep_mass="1483.540920" massdiff="-1.006959" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="60">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1760 <modification_info modified_peptide="VCSDQ[129]HYN[115]TEQT">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1761 <mod_aminoacid_mass position="2" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1762 <mod_aminoacid_mass position="5" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1763 <mod_aminoacid_mass position="8" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1764 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1765 <search_score name="xcorr" value="0.307"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1766 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1767 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1768 <search_score name="spscore" value="3.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1769 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1770 <search_score name="expect" value="4.44E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1771 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1772 <search_hit hit_rank="4" peptide="VCSDQHYNTEQT" peptide_prev_aa="R" peptide_next_aa="S" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="44" calc_neutral_pep_mass="1482.556904" massdiff="-0.022943" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="60">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1773 <modification_info modified_peptide="VCSDQHYN[115]TEQT">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1774 <mod_aminoacid_mass position="2" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1775 <mod_aminoacid_mass position="8" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1776 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1777 <search_score name="xcorr" value="0.304"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1778 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1779 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1780 <search_score name="spscore" value="3.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1781 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1782 <search_score name="expect" value="4.55E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1783 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1784 <search_hit hit_rank="5" peptide="VCSDQHYNTEQT" peptide_prev_aa="R" peptide_next_aa="S" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="44" calc_neutral_pep_mass="1482.556904" massdiff="-0.022943" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="60">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1785 <modification_info modified_peptide="VCSDQ[129]HYNTEQT">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1786 <mod_aminoacid_mass position="2" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1787 <mod_aminoacid_mass position="5" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1788 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1789 <search_score name="xcorr" value="0.304"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1790 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1791 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1792 <search_score name="spscore" value="3.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1793 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1794 <search_score name="expect" value="4.55E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1795 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1796 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1797 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1798 <spectrum_query spectrum="201208-378803.00020.00020.2" spectrumNativeID="sample=1 period=1 cycle=1199 experiment=3" start_scan="20" end_scan="20" precursor_neutral_mass="988.355974" assumed_charge="2" index="40" retention_time_sec="664.0">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1799 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1800 <search_hit hit_rank="1" peptide="EYDSETDAG" peptide_prev_aa="K" peptide_next_aa="S" protein="gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="16" calc_neutral_pep_mass="985.351250" massdiff="3.004724" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="50">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1801 <search_score name="xcorr" value="0.324"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1802 <search_score name="deltacn" value="0.293"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1803 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1804 <search_score name="spscore" value="5.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1805 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1806 <search_score name="expect" value="5.67E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1807 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1808 <search_hit hit_rank="2" peptide="ADTESDYEG" peptide_prev_aa="K" peptide_next_aa="S" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="0" tot_num_ions="16" calc_neutral_pep_mass="985.351250" massdiff="3.004724" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="50">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1809 <search_score name="xcorr" value="0.229"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1810 <search_score name="deltacn" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1811 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1812 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1813 <search_score name="sprank" value="4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1814 <search_score name="expect" value="2.28E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1815 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1816 <search_hit hit_rank="3" peptide="CRHEPCQ" peptide_prev_aa="R" peptide_next_aa="Y" protein="gi|358414198|ref|XP_002700672.2|" num_tot_proteins="4" num_matched_ions="1" tot_num_ions="12" calc_neutral_pep_mass="988.337867" massdiff="0.018107" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="50">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1817 <modification_info modified_peptide="CRHEPCQ[129]">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1818 <mod_aminoacid_mass position="1" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1819 <mod_aminoacid_mass position="6" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1820 <mod_aminoacid_mass position="7" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1821 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1822 <search_score name="xcorr" value="0.229"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1823 <search_score name="deltacn" value="0.019"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1824 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1825 <search_score name="spscore" value="1.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1826 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1827 <search_score name="expect" value="2.28E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1828 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1829 <search_hit hit_rank="4" peptide="CPEHRCQ" peptide_prev_aa="R" peptide_next_aa="Y" protein="XXX_gi|358414198|ref|XP_002700672.2|" num_tot_proteins="4" num_matched_ions="1" tot_num_ions="12" calc_neutral_pep_mass="988.337867" massdiff="0.018107" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="50">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1830 <modification_info modified_peptide="CPEHRCQ[129]">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1831 <mod_aminoacid_mass position="1" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1832 <mod_aminoacid_mass position="6" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1833 <mod_aminoacid_mass position="7" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1834 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1835 <search_score name="xcorr" value="0.224"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1836 <search_score name="deltacn" value="0.223"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1837 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1838 <search_score name="spscore" value="1.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1839 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1840 <search_score name="expect" value="2.43E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1841 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1842 <search_hit hit_rank="5" peptide="PYDDDAEY" peptide_prev_aa="K" peptide_next_aa="M" protein="gi|528921178|ref|XP_592304.7|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="14" calc_neutral_pep_mass="986.350522" massdiff="2.005452" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="50">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1843 <search_score name="xcorr" value="0.174"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1844 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1845 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1846 <search_score name="spscore" value="7.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1847 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1848 <search_score name="expect" value="5.05E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1849 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1850 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1851 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1852 <spectrum_query spectrum="201208-378803.00021.00021.2" spectrumNativeID="sample=1 period=1 cycle=1200 experiment=2" start_scan="21" end_scan="21" precursor_neutral_mass="1124.410142" assumed_charge="2" index="41" retention_time_sec="666.6">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1853 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1854 <search_hit hit_rank="1" peptide="SEDNPMNQDG" peptide_prev_aa="L" peptide_next_aa="-" protein="XXX_gi|139948503|ref|NP_001077142.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="18" calc_neutral_pep_mass="1121.393117" massdiff="3.017025" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="78">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1855 <modification_info modified_peptide="SEDNPM[147]NQDG">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1856 <mod_aminoacid_mass position="6" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1857 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1858 <search_score name="xcorr" value="0.448"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1859 <search_score name="deltacn" value="0.379"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1860 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1861 <search_score name="spscore" value="11.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1862 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1863 <search_score name="expect" value="1.00E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1864 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1865 <search_hit hit_rank="2" peptide="WENGECAQK" peptide_prev_aa="K" peptide_next_aa="K" protein="gi|528969819|ref|XP_005213230.1|" num_tot_proteins="2" num_matched_ions="1" tot_num_ions="16" calc_neutral_pep_mass="1123.412806" massdiff="0.997336" num_tol_term="2" num_missed_cleavages="0" num_matched_peptides="78">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1866 <modification_info modified_peptide="WEN[115]GECAQ[129]K">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1867 <mod_aminoacid_mass position="3" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1868 <mod_aminoacid_mass position="6" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1869 <mod_aminoacid_mass position="8" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1870 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1871 <search_score name="xcorr" value="0.278"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1872 <search_score name="deltacn" value="0.186"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1873 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1874 <search_score name="spscore" value="1.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1875 <search_score name="sprank" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1876 <search_score name="expect" value="8.42E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1877 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1878 <search_hit hit_rank="3" peptide="SMENEDKEE" peptide_prev_aa="K" peptide_next_aa="T" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="16" calc_neutral_pep_mass="1125.413184" massdiff="-1.003042" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="78">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1879 <modification_info modified_peptide="SM[147]ENEDKEE">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1880 <mod_aminoacid_mass position="2" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1881 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1882 <search_score name="xcorr" value="0.226"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1883 <search_score name="deltacn" value="0.028"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1884 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1885 <search_score name="spscore" value="4.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1886 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1887 <search_score name="expect" value="1.96E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1888 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1889 <search_hit hit_rank="4" peptide="QACEGNEWK" peptide_prev_aa="K" peptide_next_aa="K" protein="XXX_gi|528969819|ref|XP_005213230.1|" num_tot_proteins="2" num_matched_ions="0" tot_num_ions="16" calc_neutral_pep_mass="1123.412806" massdiff="0.997336" num_tol_term="2" num_missed_cleavages="0" num_matched_peptides="78">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1890 <modification_info modified_peptide="Q[129]ACEGN[115]EWK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1891 <mod_aminoacid_mass position="1" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1892 <mod_aminoacid_mass position="3" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1893 <mod_aminoacid_mass position="6" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1894 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1895 <search_score name="xcorr" value="0.220"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1896 <search_score name="deltacn" value="0.138"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1897 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1898 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1899 <search_score name="sprank" value="8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1900 <search_score name="expect" value="2.17E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1901 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1902 <search_hit hit_rank="5" peptide="DLTEIQCDM" peptide_prev_aa="K" peptide_next_aa="S" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="16" calc_neutral_pep_mass="1125.420593" massdiff="-1.010451" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="78">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1903 <modification_info modified_peptide="DLTEIQ[129]CDM">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1904 <mod_aminoacid_mass position="6" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1905 <mod_aminoacid_mass position="7" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1906 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1907 <search_score name="xcorr" value="0.190"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1908 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1909 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1910 <search_score name="spscore" value="2.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1911 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1912 <search_score name="expect" value="3.56E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1913 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1914 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1915 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1916 <spectrum_query spectrum="201208-378803.00021.00021.3" spectrumNativeID="sample=1 period=1 cycle=1200 experiment=2" start_scan="21" end_scan="21" precursor_neutral_mass="1686.615213" assumed_charge="3" index="42" retention_time_sec="666.6">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1917 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1918 <search_hit hit_rank="1" peptide="SEDNPMNQDLMQSTG" peptide_prev_aa="S" peptide_next_aa="-" protein="XXX_gi|139948503|ref|NP_001077142.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="56" calc_neutral_pep_mass="1683.623982" massdiff="2.991230" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="90">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1919 <modification_info modified_peptide="SEDN[115]PM[147]NQDLMQ[129]STG">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1920 <mod_aminoacid_mass position="4" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1921 <mod_aminoacid_mass position="6" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1922 <mod_aminoacid_mass position="12" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1923 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1924 <search_score name="xcorr" value="0.420"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1925 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1926 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1927 <search_score name="spscore" value="1.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1928 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1929 <search_score name="expect" value="1.40E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1930 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1931 <search_hit hit_rank="2" peptide="SEDNPMNQDLMQSTG" peptide_prev_aa="S" peptide_next_aa="-" protein="XXX_gi|139948503|ref|NP_001077142.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="56" calc_neutral_pep_mass="1683.623982" massdiff="2.991230" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="90">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1932 <modification_info modified_peptide="SEDNPMNQ[129]DLM[147]Q[129]STG">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1933 <mod_aminoacid_mass position="8" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1934 <mod_aminoacid_mass position="11" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1935 <mod_aminoacid_mass position="12" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1936 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1937 <search_score name="xcorr" value="0.413"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1938 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1939 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1940 <search_score name="spscore" value="1.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1941 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1942 <search_score name="expect" value="1.49E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1943 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1944 <search_hit hit_rank="3" peptide="SEDNPMNQDLMQSTG" peptide_prev_aa="S" peptide_next_aa="-" protein="XXX_gi|139948503|ref|NP_001077142.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="56" calc_neutral_pep_mass="1683.623982" massdiff="2.991230" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="90">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1945 <modification_info modified_peptide="SEDNPMN[115]QDLM[147]Q[129]STG">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1946 <mod_aminoacid_mass position="7" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1947 <mod_aminoacid_mass position="11" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1948 <mod_aminoacid_mass position="12" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1949 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1950 <search_score name="xcorr" value="0.413"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1951 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1952 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1953 <search_score name="spscore" value="1.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1954 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1955 <search_score name="expect" value="1.49E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1956 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1957 <search_hit hit_rank="4" peptide="SEDNPMNQDLMQSTG" peptide_prev_aa="S" peptide_next_aa="-" protein="XXX_gi|139948503|ref|NP_001077142.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="56" calc_neutral_pep_mass="1684.607998" massdiff="2.007214" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="90">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1958 <modification_info modified_peptide="SEDNPMN[115]Q[129]DLM[147]Q[129]STG">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1959 <mod_aminoacid_mass position="7" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1960 <mod_aminoacid_mass position="8" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1961 <mod_aminoacid_mass position="11" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1962 <mod_aminoacid_mass position="12" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1963 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1964 <search_score name="xcorr" value="0.391"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1965 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1966 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1967 <search_score name="spscore" value="1.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1968 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1969 <search_score name="expect" value="1.84E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1970 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1971 <search_hit hit_rank="5" peptide="SEDNPMNQDLMQSTG" peptide_prev_aa="S" peptide_next_aa="-" protein="XXX_gi|139948503|ref|NP_001077142.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="56" calc_neutral_pep_mass="1683.623982" massdiff="2.991230" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="90">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1972 <modification_info modified_peptide="SEDN[115]PM[147]N[115]QDLMQSTG">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1973 <mod_aminoacid_mass position="4" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1974 <mod_aminoacid_mass position="6" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1975 <mod_aminoacid_mass position="7" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1976 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1977 <search_score name="xcorr" value="0.389"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1978 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1979 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1980 <search_score name="spscore" value="1.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1981 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1982 <search_score name="expect" value="1.86E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1983 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1984 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1985 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1986 <spectrum_query spectrum="201208-378803.00022.00022.2" spectrumNativeID="sample=1 period=1 cycle=1200 experiment=3" start_scan="22" end_scan="22" precursor_neutral_mass="898.390940" assumed_charge="2" index="43" retention_time_sec="668.7">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1987 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1988 <search_hit hit_rank="1" peptide="TMFTMPR" peptide_prev_aa="G" peptide_next_aa="L" protein="gi|139948503|ref|NP_001077142.1|" num_tot_proteins="1" num_matched_ions="3" tot_num_ions="12" calc_neutral_pep_mass="898.404080" massdiff="-0.013140" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="266">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1989 <modification_info modified_peptide="TMFTM[147]PR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1990 <mod_aminoacid_mass position="5" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1991 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1992 <search_score name="xcorr" value="0.455"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1993 <search_score name="deltacn" value="0.178"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1994 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1995 <search_score name="spscore" value="16.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1996 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1997 <search_score name="expect" value="3.52E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1998 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
1999 <search_hit hit_rank="2" peptide="EPPGTQDGV" peptide_prev_aa="R" peptide_next_aa="F" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="16" calc_neutral_pep_mass="899.387242" massdiff="-0.996303" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="266">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2000 <modification_info modified_peptide="EPPGTQ[129]DGV">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2001 <mod_aminoacid_mass position="6" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2002 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2003 <search_score name="xcorr" value="0.374"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2004 <search_score name="deltacn" value="0.051"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2005 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2006 <search_score name="spscore" value="3.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2007 <search_score name="sprank" value="8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2008 <search_score name="expect" value="9.75E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2009 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2010 <search_hit hit_rank="3" peptide="TMFTMPR" peptide_prev_aa="G" peptide_next_aa="L" protein="gi|139948503|ref|NP_001077142.1|" num_tot_proteins="1" num_matched_ions="3" tot_num_ions="12" calc_neutral_pep_mass="898.404080" massdiff="-0.013140" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="266">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2011 <modification_info modified_peptide="TM[147]FTMPR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2012 <mod_aminoacid_mass position="2" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2013 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2014 <search_score name="xcorr" value="0.355"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2015 <search_score name="deltacn" value="0.021"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2016 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2017 <search_score name="spscore" value="15.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2018 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2019 <search_score name="expect" value="1.24E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2020 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2021 <search_hit hit_rank="4" peptide="SASEELQH" peptide_prev_aa="R" peptide_next_aa="L" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="14" calc_neutral_pep_mass="899.398475" massdiff="-1.007536" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="266">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2022 <search_score name="xcorr" value="0.348"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2023 <search_score name="deltacn" value="0.082"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2024 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2025 <search_score name="spscore" value="1.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2026 <search_score name="sprank" value="10"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2027 <search_score name="expect" value="1.36E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2028 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2029 <search_hit hit_rank="5" peptide="EPPGTQDGV" peptide_prev_aa="R" peptide_next_aa="F" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="16" calc_neutral_pep_mass="898.403226" massdiff="-0.012287" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="266">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2030 <search_score name="xcorr" value="0.319"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2031 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2032 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2033 <search_score name="spscore" value="3.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2034 <search_score name="sprank" value="8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2035 <search_score name="expect" value="1.95E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2036 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2037 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2038 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2039 <spectrum_query spectrum="201208-378803.00022.00022.3" spectrumNativeID="sample=1 period=1 cycle=1200 experiment=3" start_scan="22" end_scan="22" precursor_neutral_mass="1347.586409" assumed_charge="3" index="44" retention_time_sec="668.7">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2040 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2041 <search_hit hit_rank="1" peptide="WWDHIGNGAFM" peptide_prev_aa="-" peptide_next_aa="K" protein="XXX_gi|528961840|ref|XP_005211303.1|" num_tot_proteins="1" num_matched_ions="4" tot_num_ions="40" calc_neutral_pep_mass="1348.565877" massdiff="-0.979468" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="328">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2042 <modification_info modified_peptide="WWDHIGNGAFM[147]">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2043 <mod_aminoacid_mass position="11" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2044 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2045 <search_score name="xcorr" value="0.762"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2046 <search_score name="deltacn" value="0.038"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2047 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2048 <search_score name="spscore" value="9.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2049 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2050 <search_score name="expect" value="4.99E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2051 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2052 <search_hit hit_rank="2" peptide="EWRSNLEEQR" peptide_prev_aa="M" peptide_next_aa="A" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="4" tot_num_ions="36" calc_neutral_pep_mass="1347.605509" massdiff="-0.019099" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="328">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2053 <modification_info modified_peptide="EWRSN[115]LEEQ[129]R">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2054 <mod_aminoacid_mass position="5" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2055 <mod_aminoacid_mass position="9" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2056 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2057 <search_score name="xcorr" value="0.732"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2058 <search_score name="deltacn" value="0.022"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2059 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2060 <search_score name="spscore" value="8.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2061 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2062 <search_score name="expect" value="6.09E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2063 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2064 <search_hit hit_rank="3" peptide="SDDQGSEHTVDR" peptide_prev_aa="S" peptide_next_aa="K" protein="gi|30466252|ref|NP_848667.1|" num_tot_proteins="1" num_matched_ions="5" tot_num_ions="44" calc_neutral_pep_mass="1344.554201" massdiff="3.032209" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="328">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2065 <search_score name="xcorr" value="0.717"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2066 <search_score name="deltacn" value="0.065"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2067 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2068 <search_score name="spscore" value="9.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2069 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2070 <search_score name="expect" value="6.79E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2071 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2072 <search_hit hit_rank="4" peptide="PDDLGRGGNEEST" peptide_prev_aa="K" peptide_next_aa="K" protein="gi|528935739|ref|XP_005201142.1|" num_tot_proteins="2" num_matched_ions="2" tot_num_ions="48" calc_neutral_pep_mass="1345.574602" massdiff="2.011808" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="328">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2073 <search_score name="xcorr" value="0.670"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2074 <search_score name="deltacn" value="0.084"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2075 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2076 <search_score name="spscore" value="1.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2077 <search_score name="sprank" value="22"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2078 <search_score name="expect" value="9.36E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2079 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2080 <search_hit hit_rank="5" peptide="SQLQQEREETT" peptide_prev_aa="K" peptide_next_aa="L" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="40" calc_neutral_pep_mass="1348.610653" massdiff="-1.024244" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="328">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2081 <modification_info modified_peptide="SQ[129]LQQEREETT">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2082 <mod_aminoacid_mass position="2" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2083 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2084 <search_score name="xcorr" value="0.613"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2085 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2086 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2087 <search_score name="spscore" value="3.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2088 <search_score name="sprank" value="9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2089 <search_score name="expect" value="1.38E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2090 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2091 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2092 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2093 <spectrum_query spectrum="201208-378803.00023.00023.3" spectrumNativeID="sample=1 period=1 cycle=1200 experiment=4" start_scan="23" end_scan="23" precursor_neutral_mass="1659.608169" assumed_charge="3" index="45" retention_time_sec="670.8">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2094 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2095 <search_hit hit_rank="1" peptide="HEPCQYGLMNNFQ" peptide_prev_aa="R" peptide_next_aa="V" protein="gi|358414198|ref|XP_002700672.2|" num_tot_proteins="4" num_matched_ions="1" tot_num_ions="48" calc_neutral_pep_mass="1656.607211" massdiff="3.000958" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="64">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2096 <modification_info modified_peptide="HEPCQ[129]YGLM[147]N[115]NFQ[129]">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2097 <mod_aminoacid_mass position="4" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2098 <mod_aminoacid_mass position="5" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2099 <mod_aminoacid_mass position="9" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2100 <mod_aminoacid_mass position="10" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2101 <mod_aminoacid_mass position="13" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2102 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2103 <search_score name="xcorr" value="0.291"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2104 <search_score name="deltacn" value="0.210"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2105 <search_score name="deltacnstar" value="0.153"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2106 <search_score name="spscore" value="0.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2107 <search_score name="sprank" value="4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2108 <search_score name="expect" value="3.61E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2109 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2110 <search_hit hit_rank="2" peptide="HEPCQYGLMNNFQ" peptide_prev_aa="R" peptide_next_aa="V" protein="gi|358414198|ref|XP_002700672.2|" num_tot_proteins="4" num_matched_ions="1" tot_num_ions="48" calc_neutral_pep_mass="1656.607211" massdiff="3.000958" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="64">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2111 <modification_info modified_peptide="HEPCQ[129]YGLM[147]N[115]N[115]FQ">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2112 <mod_aminoacid_mass position="4" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2113 <mod_aminoacid_mass position="5" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2114 <mod_aminoacid_mass position="9" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2115 <mod_aminoacid_mass position="10" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2116 <mod_aminoacid_mass position="11" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2117 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2118 <search_score name="xcorr" value="0.246"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2119 <search_score name="deltacn" value="0.068"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2120 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2121 <search_score name="spscore" value="0.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2122 <search_score name="sprank" value="4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2123 <search_score name="expect" value="5.33E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2124 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2125 <search_hit hit_rank="3" peptide="MVNNGHSFNVEYDD" peptide_prev_aa="R" peptide_next_aa="S" protein="gi|30466252|ref|NP_848667.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="52" calc_neutral_pep_mass="1657.620217" massdiff="1.987952" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="64">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2126 <modification_info modified_peptide="M[147]VN[115]NGHSFN[115]VEYDD">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2127 <mod_aminoacid_mass position="1" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2128 <mod_aminoacid_mass position="3" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2129 <mod_aminoacid_mass position="9" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2130 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2131 <search_score name="xcorr" value="0.230"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2132 <search_score name="deltacn" value="0.205"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2133 <search_score name="deltacnstar" value="0.001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2134 <search_score name="spscore" value="1.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2135 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2136 <search_score name="expect" value="6.17E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2137 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2138 <search_hit hit_rank="4" peptide="MVNNGHSFNVEYDD" peptide_prev_aa="R" peptide_next_aa="S" protein="gi|30466252|ref|NP_848667.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="52" calc_neutral_pep_mass="1657.620217" massdiff="1.987952" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="64">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2139 <modification_info modified_peptide="M[147]VNN[115]GHSFN[115]VEYDD">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2140 <mod_aminoacid_mass position="1" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2141 <mod_aminoacid_mass position="4" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2142 <mod_aminoacid_mass position="9" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2143 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2144 <search_score name="xcorr" value="0.229"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2145 <search_score name="deltacn" value="0.204"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2146 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2147 <search_score name="spscore" value="1.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2148 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2149 <search_score name="expect" value="6.19E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2150 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2151 <search_hit hit_rank="5" peptide="TQSDFFGRFMNMC" peptide_prev_aa="K" peptide_next_aa="E" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="48" calc_neutral_pep_mass="1657.621086" massdiff="1.987083" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="64">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2152 <modification_info modified_peptide="TQSDFFGRFMN[115]M[147]C">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2153 <mod_aminoacid_mass position="11" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2154 <mod_aminoacid_mass position="12" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2155 <mod_aminoacid_mass position="13" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2156 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2157 <search_score name="xcorr" value="0.183"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2158 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2159 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2160 <search_score name="spscore" value="1.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2161 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2162 <search_score name="expect" value="9.32E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2163 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2164 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2165 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2166 <spectrum_query spectrum="201208-378803.00023.00023.2" spectrumNativeID="sample=1 period=1 cycle=1200 experiment=4" start_scan="23" end_scan="23" precursor_neutral_mass="1106.405446" assumed_charge="2" index="46" retention_time_sec="670.8">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2167 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2168 <search_hit hit_rank="1" peptide="NFCYTLCK" peptide_prev_aa="C" peptide_next_aa="P" protein="XXX_gi|528968221|ref|XP_005212615.1|" num_tot_proteins="2" num_matched_ions="1" tot_num_ions="14" calc_neutral_pep_mass="1107.425285" massdiff="-1.019839" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="42">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2169 <modification_info modified_peptide="N[115]FCYTLCK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2170 <mod_aminoacid_mass position="1" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2171 <mod_aminoacid_mass position="3" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2172 <mod_aminoacid_mass position="7" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2173 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2174 <search_score name="xcorr" value="0.251"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2175 <search_score name="deltacn" value="0.041"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2176 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2177 <search_score name="spscore" value="4.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2178 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2179 <search_score name="expect" value="5.25E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2180 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2181 <search_hit hit_rank="2" peptide="CLTYCFNK" peptide_prev_aa="C" peptide_next_aa="P" protein="gi|528968221|ref|XP_005212615.1|" num_tot_proteins="2" num_matched_ions="1" tot_num_ions="14" calc_neutral_pep_mass="1107.425285" massdiff="-1.019839" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="42">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2182 <modification_info modified_peptide="CLTYCFN[115]K">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2183 <mod_aminoacid_mass position="1" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2184 <mod_aminoacid_mass position="5" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2185 <mod_aminoacid_mass position="7" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2186 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2187 <search_score name="xcorr" value="0.241"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2188 <search_score name="deltacn" value="0.018"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2189 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2190 <search_score name="spscore" value="4.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2191 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2192 <search_score name="expect" value="6.39E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2193 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2194 <search_hit hit_rank="3" peptide="IMKDCNYC" peptide_prev_aa="K" peptide_next_aa="R" protein="XXX_gi|528954392|ref|XP_005208526.1|" num_tot_proteins="2" num_matched_ions="1" tot_num_ions="14" calc_neutral_pep_mass="1104.392605" massdiff="2.012842" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="42">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2195 <modification_info modified_peptide="IMKDCNYC">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2196 <mod_aminoacid_mass position="5" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2197 <mod_aminoacid_mass position="8" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2198 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2199 <search_score name="xcorr" value="0.236"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2200 <search_score name="deltacn" value="0.155"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2201 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2202 <search_score name="spscore" value="4.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2203 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2204 <search_score name="expect" value="6.94E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2205 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2206 <search_hit hit_rank="4" peptide="DQNMPNDESG" peptide_prev_aa="L" peptide_next_aa="-" protein="gi|139948503|ref|NP_001077142.1|" num_tot_proteins="1" num_matched_ions="0" tot_num_ions="18" calc_neutral_pep_mass="1105.398217" massdiff="1.007229" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="42">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2207 <search_score name="xcorr" value="0.200"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2208 <search_score name="deltacn" value="0.254"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2209 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2210 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2211 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2212 <search_score name="expect" value="1.39E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2213 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2214 <search_hit hit_rank="5" peptide="KAQDDQASDQ" peptide_prev_aa="K" peptide_next_aa="V" protein="XXX_gi|528921178|ref|XP_592304.7|" num_tot_proteins="3" num_matched_ions="0" tot_num_ions="18" calc_neutral_pep_mass="1107.420394" massdiff="-1.014948" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="42">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2215 <modification_info modified_peptide="KAQ[129]DDQ[129]ASDQ[129]">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2216 <mod_aminoacid_mass position="3" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2217 <mod_aminoacid_mass position="6" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2218 <mod_aminoacid_mass position="10" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2219 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2220 <search_score name="xcorr" value="0.149"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2221 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2222 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2223 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2224 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2225 <search_score name="expect" value="3.62E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2226 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2227 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2228 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2229 <spectrum_query spectrum="201208-378803.00024.00024.2" spectrumNativeID="sample=1 period=1 cycle=1201 experiment=2" start_scan="24" end_scan="24" precursor_neutral_mass="878.349536" assumed_charge="2" index="47" retention_time_sec="673.5">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2230 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2231 <search_hit hit_rank="1" peptide="NESICEK" peptide_prev_aa="R" peptide_next_aa="S" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="12" calc_neutral_pep_mass="879.364398" massdiff="-1.014862" num_tol_term="2" num_missed_cleavages="0" num_matched_peptides="236">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2232 <modification_info modified_peptide="NESICEK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2233 <mod_aminoacid_mass position="5" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2234 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2235 <search_score name="xcorr" value="0.395"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2236 <search_score name="deltacn" value="0.121"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2237 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2238 <search_score name="spscore" value="20.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2239 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2240 <search_score name="expect" value="3.17E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2241 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2242 <search_hit hit_rank="2" peptide="DATGSVNDT" peptide_prev_aa="R" peptide_next_aa="I" protein="gi|358414198|ref|XP_002700672.2|" num_tot_proteins="4" num_matched_ions="1" tot_num_ions="16" calc_neutral_pep_mass="878.361755" massdiff="-0.012219" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="236">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2243 <search_score name="xcorr" value="0.348"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2244 <search_score name="deltacn" value="0.374"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2245 <search_score name="deltacnstar" value="0.245"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2246 <search_score name="spscore" value="1.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2247 <search_score name="sprank" value="8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2248 <search_score name="expect" value="6.18E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2249 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2250 <search_hit hit_rank="3" peptide="DATGSVNDT" peptide_prev_aa="R" peptide_next_aa="I" protein="gi|358414198|ref|XP_002700672.2|" num_tot_proteins="4" num_matched_ions="1" tot_num_ions="16" calc_neutral_pep_mass="879.345771" massdiff="-0.996235" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="236">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2251 <modification_info modified_peptide="DATGSVN[115]DT">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2252 <mod_aminoacid_mass position="7" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2253 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2254 <search_score name="xcorr" value="0.262"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2255 <search_score name="deltacn" value="0.171"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2256 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2257 <search_score name="spscore" value="1.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2258 <search_score name="sprank" value="8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2259 <search_score name="expect" value="2.03E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2260 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2261 <search_hit hit_rank="4" peptide="EQQGTNEA" peptide_prev_aa="K" peptide_next_aa="T" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="14" calc_neutral_pep_mass="876.346106" massdiff="2.003431" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="236">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2262 <modification_info modified_peptide="EQQGTN[115]EA">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2263 <mod_aminoacid_mass position="6" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2264 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2265 <search_score name="xcorr" value="0.217"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2266 <search_score name="deltacn" value="0.016"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2267 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2268 <search_score name="spscore" value="2.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2269 <search_score name="sprank" value="4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2270 <search_score name="expect" value="3.81E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2271 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2272 <search_hit hit_rank="5" peptide="DDACELR" peptide_prev_aa="L" peptide_next_aa="A" protein="XXX_gi|30794280|ref|NP_851335.1|" num_tot_proteins="1" num_matched_ions="0" tot_num_ions="12" calc_neutral_pep_mass="878.343997" massdiff="0.005539" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="236">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2273 <modification_info modified_peptide="DDACELR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2274 <mod_aminoacid_mass position="4" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2275 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2276 <search_score name="xcorr" value="0.214"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2277 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2278 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2279 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2280 <search_score name="sprank" value="9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2281 <search_score name="expect" value="4.00E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2282 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2283 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2284 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2285 <spectrum_query spectrum="201208-378803.00024.00024.3" spectrumNativeID="sample=1 period=1 cycle=1201 experiment=2" start_scan="24" end_scan="24" precursor_neutral_mass="1317.524304" assumed_charge="3" index="48" retention_time_sec="673.5">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2286 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2287 <search_hit hit_rank="1" peptide="QWSSQGFSGDSK" peptide_prev_aa="V" peptide_next_aa="Y" protein="gi|528920173|ref|XP_001788336.2|" num_tot_proteins="2" num_matched_ions="3" tot_num_ions="44" calc_neutral_pep_mass="1314.536426" massdiff="2.987878" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="118">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2288 <modification_info modified_peptide="Q[129]WSSQ[129]GFSGDSK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2289 <mod_aminoacid_mass position="1" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2290 <mod_aminoacid_mass position="5" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2291 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2292 <search_score name="xcorr" value="0.871"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2293 <search_score name="deltacn" value="0.416"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2294 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2295 <search_score name="spscore" value="5.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2296 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2297 <search_score name="expect" value="1.00E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2298 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2299 <search_hit hit_rank="2" peptide="SMAGGSRMMTDK" peptide_prev_aa="H" peptide_next_aa="E" protein="gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="3" tot_num_ions="44" calc_neutral_pep_mass="1318.531512" massdiff="-1.007208" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="118">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2300 <modification_info modified_peptide="SM[147]AGGSRM[147]M[147]TDK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2301 <mod_aminoacid_mass position="2" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2302 <mod_aminoacid_mass position="8" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2303 <mod_aminoacid_mass position="9" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2304 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2305 <search_score name="xcorr" value="0.509"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2306 <search_score name="deltacn" value="0.017"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2307 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2308 <search_score name="spscore" value="3.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2309 <search_score name="sprank" value="7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2310 <search_score name="expect" value="6.19E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2311 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2312 <search_hit hit_rank="3" peptide="SDGSFGQSSWQK" peptide_prev_aa="V" peptide_next_aa="Y" protein="XXX_gi|528920173|ref|XP_001788336.2|" num_tot_proteins="2" num_matched_ions="2" tot_num_ions="44" calc_neutral_pep_mass="1314.536426" massdiff="2.987878" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="118">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2313 <modification_info modified_peptide="SDGSFGQ[129]SSWQ[129]K">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2314 <mod_aminoacid_mass position="7" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2315 <mod_aminoacid_mass position="11" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2316 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2317 <search_score name="xcorr" value="0.500"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2318 <search_score name="deltacn" value="0.055"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2319 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2320 <search_score name="spscore" value="1.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2321 <search_score name="sprank" value="11"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2322 <search_score name="expect" value="6.72E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2323 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2324 <search_hit hit_rank="4" peptide="AGPDTSHEDDFK" peptide_prev_aa="S" peptide_next_aa="V" protein="XXX_gi|528928354|ref|XP_005193233.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="44" calc_neutral_pep_mass="1317.547324" massdiff="-0.023020" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="118">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2325 <search_score name="xcorr" value="0.473"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2326 <search_score name="deltacn" value="0.092"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2327 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2328 <search_score name="spscore" value="1.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2329 <search_score name="sprank" value="11"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2330 <search_score name="expect" value="8.67E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2331 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2332 <search_hit hit_rank="5" peptide="WSNYGPMGHDR" peptide_prev_aa="R" peptide_next_aa="G" protein="XXX_gi|528993971|ref|XP_005219929.1|" num_tot_proteins="4" num_matched_ions="4" tot_num_ions="40" calc_neutral_pep_mass="1318.551304" massdiff="-1.027000" num_tol_term="2" num_missed_cleavages="0" num_matched_peptides="118">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2333 <search_score name="xcorr" value="0.430"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2334 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2335 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2336 <search_score name="spscore" value="7.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2337 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2338 <search_score name="expect" value="1.30E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2339 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2340 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2341 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2342 <spectrum_query spectrum="201208-378803.00025.00025.2" spectrumNativeID="sample=1 period=1 cycle=1201 experiment=3" start_scan="25" end_scan="25" precursor_neutral_mass="1022.419389" assumed_charge="2" index="49" retention_time_sec="675.6">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2343 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2344 <search_hit hit_rank="1" peptide="LECDDQNK" peptide_prev_aa="G" peptide_next_aa="R" protein="gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="14" calc_neutral_pep_mass="1021.402241" massdiff="1.017149" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="242">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2345 <modification_info modified_peptide="LECDDQNK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2346 <mod_aminoacid_mass position="3" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2347 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2348 <search_score name="xcorr" value="0.579"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2349 <search_score name="deltacn" value="0.043"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2350 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2351 <search_score name="spscore" value="14.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2352 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2353 <search_score name="expect" value="1.00E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2354 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2355 <search_hit hit_rank="2" peptide="NQDDCELK" peptide_prev_aa="G" peptide_next_aa="R" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="14" calc_neutral_pep_mass="1021.402241" massdiff="1.017149" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="242">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2356 <modification_info modified_peptide="NQDDCELK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2357 <mod_aminoacid_mass position="5" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2358 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2359 <search_score name="xcorr" value="0.554"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2360 <search_score name="deltacn" value="0.268"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2361 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2362 <search_score name="spscore" value="12.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2363 <search_score name="sprank" value="4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2364 <search_score name="expect" value="1.11E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2365 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2366 <search_hit hit_rank="3" peptide="CNLAGNQIE" peptide_prev_aa="K" peptide_next_aa="E" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="16" calc_neutral_pep_mass="1020.406992" massdiff="2.012397" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="242">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2367 <modification_info modified_peptide="CN[115]LAGN[115]QIE">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2368 <mod_aminoacid_mass position="1" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2369 <mod_aminoacid_mass position="2" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2370 <mod_aminoacid_mass position="6" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2371 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2372 <search_score name="xcorr" value="0.406"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2373 <search_score name="deltacn" value="0.108"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2374 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2375 <search_score name="spscore" value="9.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2376 <search_score name="sprank" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2377 <search_score name="expect" value="6.78E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2378 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2379 <search_hit hit_rank="4" peptide="PDVSNNYGR" peptide_prev_aa="Q" peptide_next_aa="I" protein="XXX_gi|528993971|ref|XP_005219929.1|" num_tot_proteins="4" num_matched_ions="3" tot_num_ions="16" calc_neutral_pep_mass="1022.430504" massdiff="-0.011115" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="242">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2380 <modification_info modified_peptide="PDVSN[115]N[115]YGR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2381 <mod_aminoacid_mass position="5" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2382 <mod_aminoacid_mass position="6" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2383 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2384 <search_score name="xcorr" value="0.362"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2385 <search_score name="deltacn" value="0.061"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2386 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2387 <search_score name="spscore" value="17.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2388 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2389 <search_score name="expect" value="1.16E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2390 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2391 <search_hit hit_rank="5" peptide="DFVTSYCK" peptide_prev_aa="A" peptide_next_aa="L" protein="XXX_gi|30794280|ref|NP_851335.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="14" calc_neutral_pep_mass="1019.426999" massdiff="2.992390" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="242">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2392 <modification_info modified_peptide="DFVTSYCK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2393 <mod_aminoacid_mass position="7" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2394 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2395 <search_score name="xcorr" value="0.340"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2396 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2397 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2398 <search_score name="spscore" value="12.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2399 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2400 <search_score name="expect" value="1.51E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2401 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2402 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2403 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2404 <spectrum_query spectrum="201208-378803.00025.00025.3" spectrumNativeID="sample=1 period=1 cycle=1201 experiment=3" start_scan="25" end_scan="25" precursor_neutral_mass="1533.629084" assumed_charge="3" index="50" retention_time_sec="675.6">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2405 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2406 <search_hit hit_rank="1" peptide="QKYNCDKMICR" peptide_prev_aa="A" peptide_next_aa="K" protein="gi|528954392|ref|XP_005208526.1|" num_tot_proteins="2" num_matched_ions="4" tot_num_ions="40" calc_neutral_pep_mass="1533.626172" massdiff="0.002912" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="378">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2407 <modification_info modified_peptide="QKYN[115]CDKM[147]ICR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2408 <mod_aminoacid_mass position="4" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2409 <mod_aminoacid_mass position="5" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2410 <mod_aminoacid_mass position="8" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2411 <mod_aminoacid_mass position="10" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2412 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2413 <search_score name="xcorr" value="0.712"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2414 <search_score name="deltacn" value="0.095"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2415 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2416 <search_score name="spscore" value="17.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2417 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2418 <search_score name="expect" value="3.51E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2419 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2420 <search_hit hit_rank="2" peptide="TSNMFCAGYLEGGK" peptide_prev_aa="I" peptide_next_aa="D" protein="gi|528903801|ref|XP_871686.4|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="52" calc_neutral_pep_mass="1534.643216" massdiff="-1.014132" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="378">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2421 <modification_info modified_peptide="TSNMFCAGYLEGGK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2422 <mod_aminoacid_mass position="6" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2423 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2424 <search_score name="xcorr" value="0.645"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2425 <search_score name="deltacn" value="0.014"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2426 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2427 <search_score name="spscore" value="7.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2428 <search_score name="sprank" value="6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2429 <search_score name="expect" value="6.11E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2430 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2431 <search_hit hit_rank="3" peptide="QKYNCDKMICR" peptide_prev_aa="A" peptide_next_aa="K" protein="gi|528954392|ref|XP_005208526.1|" num_tot_proteins="2" num_matched_ions="3" tot_num_ions="40" calc_neutral_pep_mass="1532.642156" massdiff="0.986928" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="378">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2432 <modification_info modified_peptide="QKYNCDKM[147]ICR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2433 <mod_aminoacid_mass position="5" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2434 <mod_aminoacid_mass position="8" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2435 <mod_aminoacid_mass position="10" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2436 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2437 <search_score name="xcorr" value="0.636"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2438 <search_score name="deltacn" value="0.131"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2439 <search_score name="deltacnstar" value="0.095"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2440 <search_score name="spscore" value="12.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2441 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2442 <search_score name="expect" value="6.58E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2443 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2444 <search_hit hit_rank="4" peptide="QKYNCDKMICR" peptide_prev_aa="A" peptide_next_aa="K" protein="gi|528954392|ref|XP_005208526.1|" num_tot_proteins="2" num_matched_ions="4" tot_num_ions="40" calc_neutral_pep_mass="1534.610188" massdiff="-0.981104" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="378">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2445 <modification_info modified_peptide="Q[129]KYN[115]CDKM[147]ICR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2446 <mod_aminoacid_mass position="1" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2447 <mod_aminoacid_mass position="4" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2448 <mod_aminoacid_mass position="5" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2449 <mod_aminoacid_mass position="8" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2450 <mod_aminoacid_mass position="10" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2451 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2452 <search_score name="xcorr" value="0.575"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2453 <search_score name="deltacn" value="0.040"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2454 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2455 <search_score name="spscore" value="11.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2456 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2457 <search_score name="expect" value="1.08E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2458 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2459 <search_hit hit_rank="5" peptide="AGMKQRCGTFGDMG" peptide_prev_aa="-" peptide_next_aa="R" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="2" num_matched_ions="1" tot_num_ions="52" calc_neutral_pep_mass="1532.605770" massdiff="1.023313" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="378">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2460 <modification_info modified_peptide="AGMKQ[129]RCGTFGDM[147]G">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2461 <mod_aminoacid_mass position="5" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2462 <mod_aminoacid_mass position="7" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2463 <mod_aminoacid_mass position="13" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2464 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2465 <search_score name="xcorr" value="0.553"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2466 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2467 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2468 <search_score name="spscore" value="0.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2469 <search_score name="sprank" value="29"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2470 <search_score name="expect" value="1.31E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2471 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2472 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2473 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2474 <spectrum_query spectrum="201208-378803.00026.00026.3" spectrumNativeID="sample=1 period=1 cycle=1201 experiment=4" start_scan="26" end_scan="26" precursor_neutral_mass="2375.477259" assumed_charge="3" index="51" retention_time_sec="677.7">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2475 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2476 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2477 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2478 <spectrum_query spectrum="201208-378803.00026.00026.2" spectrumNativeID="sample=1 period=1 cycle=1201 experiment=4" start_scan="26" end_scan="26" precursor_neutral_mass="1583.651506" assumed_charge="2" index="52" retention_time_sec="677.7">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2479 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2480 <search_hit hit_rank="1" peptide="AQNFCLSIFHGGTE" peptide_prev_aa="K" peptide_next_aa="T" protein="gi|28849955|ref|NP_788795.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="26" calc_neutral_pep_mass="1582.660975" massdiff="0.990531" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="442">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2481 <modification_info modified_peptide="AQ[129]N[115]FCLSIFHGGTE">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2482 <mod_aminoacid_mass position="2" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2483 <mod_aminoacid_mass position="3" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2484 <mod_aminoacid_mass position="5" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2485 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2486 <search_score name="xcorr" value="0.185"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2487 <search_score name="deltacn" value="0.182"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2488 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2489 <search_score name="spscore" value="2.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2490 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2491 <search_score name="expect" value="1.77E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2492 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2493 <search_hit hit_rank="2" peptide="SCLNEKSPNIAMNT" peptide_prev_aa="K" peptide_next_aa="F" protein="XXX_gi|27806963|ref|NP_776953.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="26" calc_neutral_pep_mass="1581.653842" massdiff="1.997665" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="442">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2494 <modification_info modified_peptide="SCLN[115]EKSPN[115]IAMN[115]T">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2495 <mod_aminoacid_mass position="2" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2496 <mod_aminoacid_mass position="4" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2497 <mod_aminoacid_mass position="9" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2498 <mod_aminoacid_mass position="13" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2499 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2500 <search_score name="xcorr" value="0.151"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2501 <search_score name="deltacn" value="0.013"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2502 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2503 <search_score name="spscore" value="1.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2504 <search_score name="sprank" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2505 <search_score name="expect" value="3.62E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2506 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2507 <search_hit hit_rank="3" peptide="RMVNNGHSFNVEY" peptide_prev_aa="R" peptide_next_aa="D" protein="gi|30466252|ref|NP_848667.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="24" calc_neutral_pep_mass="1583.667442" massdiff="-0.015936" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="442">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2508 <modification_info modified_peptide="RM[147]VN[115]N[115]GHSFNVEY">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2509 <mod_aminoacid_mass position="2" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2510 <mod_aminoacid_mass position="4" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2511 <mod_aminoacid_mass position="5" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2512 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2513 <search_score name="xcorr" value="0.149"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2514 <search_score name="deltacn" value="0.009"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2515 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2516 <search_score name="spscore" value="1.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2517 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2518 <search_score name="expect" value="3.77E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2519 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2520 <search_hit hit_rank="4" peptide="SCLNEKSPNIAMNT" peptide_prev_aa="K" peptide_next_aa="F" protein="XXX_gi|27806963|ref|NP_776953.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="26" calc_neutral_pep_mass="1580.669826" massdiff="2.981681" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="442">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2521 <modification_info modified_peptide="SCLN[115]EKSPNIAMN[115]T">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2522 <mod_aminoacid_mass position="2" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2523 <mod_aminoacid_mass position="4" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2524 <mod_aminoacid_mass position="13" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2525 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2526 <search_score name="xcorr" value="0.148"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2527 <search_score name="deltacn" value="0.109"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2528 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2529 <search_score name="spscore" value="1.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2530 <search_score name="sprank" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2531 <search_score name="expect" value="3.89E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2532 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2533 <search_hit hit_rank="5" peptide="DFHSAMFVGAGCER" peptide_prev_aa="D" peptide_next_aa="H" protein="XXX_gi|528968221|ref|XP_005212615.1|" num_tot_proteins="2" num_matched_ions="1" tot_num_ions="26" calc_neutral_pep_mass="1583.649698" massdiff="0.001808" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="442">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2534 <modification_info modified_peptide="DFHSAMFVGAGCER">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2535 <mod_aminoacid_mass position="12" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2536 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2537 <search_score name="xcorr" value="0.132"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2538 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2539 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2540 <search_score name="spscore" value="1.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2541 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2542 <search_score name="expect" value="5.49E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2543 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2544 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2545 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2546 <spectrum_query spectrum="201208-378803.00027.00027.3" spectrumNativeID="sample=1 period=1 cycle=1202 experiment=2" start_scan="27" end_scan="27" precursor_neutral_mass="1464.686591" assumed_charge="3" index="53" retention_time_sec="680.4">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2547 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2548 <search_hit hit_rank="1" peptide="QFVKHADMLNMK" peptide_prev_aa="V" peptide_next_aa="E" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="4" tot_num_ions="44" calc_neutral_pep_mass="1462.694858" massdiff="1.991733" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1006">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2549 <modification_info modified_peptide="Q[129]FVKHADMLN[115]MK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2550 <mod_aminoacid_mass position="1" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2551 <mod_aminoacid_mass position="10" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2552 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2553 <search_score name="xcorr" value="0.799"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2554 <search_score name="deltacn" value="0.258"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2555 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2556 <search_score name="spscore" value="10.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2557 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2558 <search_score name="expect" value="1.26E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2559 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2560 <search_hit hit_rank="2" peptide="VGMSVLPKDCPEN" peptide_prev_aa="R" peptide_next_aa="P" protein="gi|528961840|ref|XP_005211303.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="48" calc_neutral_pep_mass="1461.647952" massdiff="3.038638" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1006">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2561 <modification_info modified_peptide="VGM[147]SVLPKDCPEN">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2562 <mod_aminoacid_mass position="3" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2563 <mod_aminoacid_mass position="10" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2564 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2565 <search_score name="xcorr" value="0.593"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2566 <search_score name="deltacn" value="0.107"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2567 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2568 <search_score name="spscore" value="4.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2569 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2570 <search_score name="expect" value="8.27E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2571 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2572 <search_hit hit_rank="3" peptide="DQFRDLAEESEK" peptide_prev_aa="N" peptide_next_aa="W" protein="gi|528961840|ref|XP_005211303.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="44" calc_neutral_pep_mass="1465.668502" massdiff="-0.981912" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1006">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2573 <search_score name="xcorr" value="0.529"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2574 <search_score name="deltacn" value="0.008"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2575 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2576 <search_score name="spscore" value="1.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2577 <search_score name="sprank" value="10"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2578 <search_score name="expect" value="1.48E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2579 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2580 <search_hit hit_rank="4" peptide="SRMHQIYVQCK" peptide_prev_aa="A" peptide_next_aa="E" protein="XXX_gi|528921178|ref|XP_592304.7|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="40" calc_neutral_pep_mass="1465.680590" massdiff="-0.993999" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1006">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2581 <modification_info modified_peptide="SRM[147]HQIYVQCK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2582 <mod_aminoacid_mass position="3" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2583 <mod_aminoacid_mass position="10" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2584 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2585 <search_score name="xcorr" value="0.525"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2586 <search_score name="deltacn" value="0.045"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2587 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2588 <search_score name="spscore" value="3.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2589 <search_score name="sprank" value="4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2590 <search_score name="expect" value="1.53E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2591 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2592 <search_hit hit_rank="5" peptide="HVMAVNSGDIVIHG" peptide_prev_aa="R" peptide_next_aa="L" protein="XXX_gi|528961840|ref|XP_005211303.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="52" calc_neutral_pep_mass="1464.703099" massdiff="-0.016509" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="1006">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2593 <modification_info modified_peptide="HVM[147]AVN[115]SGDIVIHG">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2594 <mod_aminoacid_mass position="3" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2595 <mod_aminoacid_mass position="6" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2596 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2597 <search_score name="xcorr" value="0.501"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2598 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2599 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2600 <search_score name="spscore" value="3.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2601 <search_score name="sprank" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2602 <search_score name="expect" value="1.91E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2603 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2604 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2605 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2606 <spectrum_query spectrum="201208-378803.00027.00027.2" spectrumNativeID="sample=1 period=1 cycle=1202 experiment=2" start_scan="27" end_scan="27" precursor_neutral_mass="976.457727" assumed_charge="2" index="54" retention_time_sec="680.4">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2607 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2608 <search_hit hit_rank="1" peptide="QVDPLQMK" peptide_prev_aa="E" peptide_next_aa="L" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="14" calc_neutral_pep_mass="975.458284" massdiff="0.999443" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="610">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2609 <modification_info modified_peptide="Q[129]VDPLQ[129]M[147]K">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2610 <mod_aminoacid_mass position="1" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2611 <mod_aminoacid_mass position="6" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2612 <mod_aminoacid_mass position="7" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2613 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2614 <search_score name="xcorr" value="0.515"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2615 <search_score name="deltacn" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2616 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2617 <search_score name="spscore" value="5.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2618 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2619 <search_score name="expect" value="1.79E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2620 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2621 <search_hit hit_rank="2" peptide="QPEQNFSK" peptide_prev_aa="Y" peptide_next_aa="N" protein="gi|139948503|ref|NP_001077142.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="14" calc_neutral_pep_mass="976.461410" massdiff="-0.003683" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="610">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2622 <search_score name="xcorr" value="0.515"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2623 <search_score name="deltacn" value="0.011"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2624 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2625 <search_score name="spscore" value="4.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2626 <search_score name="sprank" value="4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2627 <search_score name="expect" value="1.79E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2628 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2629 <search_hit hit_rank="3" peptide="ASINPNNDK" peptide_prev_aa="S" peptide_next_aa="K" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="16" calc_neutral_pep_mass="973.435255" massdiff="3.022472" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="610">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2630 <modification_info modified_peptide="ASIN[115]PN[115]NDK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2631 <mod_aminoacid_mass position="4" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2632 <mod_aminoacid_mass position="6" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2633 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2634 <search_score name="xcorr" value="0.509"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2635 <search_score name="deltacn" value="0.011"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2636 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2637 <search_score name="spscore" value="5.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2638 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2639 <search_score name="expect" value="1.88E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2640 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2641 <search_hit hit_rank="4" peptide="LFNNLLNE" peptide_prev_aa="K" peptide_next_aa="E" protein="XXX_gi|28849955|ref|NP_788795.1|" num_tot_proteins="4" num_matched_ions="2" tot_num_ions="14" calc_neutral_pep_mass="977.470578" massdiff="-1.012851" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="610">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2642 <modification_info modified_peptide="LFN[115]NLLN[115]E">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2643 <mod_aminoacid_mass position="3" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2644 <mod_aminoacid_mass position="7" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2645 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2646 <search_score name="xcorr" value="0.504"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2647 <search_score name="deltacn" value="0.018"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2648 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2649 <search_score name="spscore" value="9.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2650 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2651 <search_score name="expect" value="1.96E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2652 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2653 <search_hit hit_rank="5" peptide="QDLLCQAK" peptide_prev_aa="L" peptide_next_aa="V" protein="gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="14" calc_neutral_pep_mass="975.469532" massdiff="0.988195" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="610">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2654 <modification_info modified_peptide="QDLLCQAK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2655 <mod_aminoacid_mass position="5" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2656 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2657 <search_score name="xcorr" value="0.495"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2658 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2659 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2660 <search_score name="spscore" value="4.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2661 <search_score name="sprank" value="4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2662 <search_score name="expect" value="2.10E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2663 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2664 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2665 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2666 <spectrum_query spectrum="201208-378803.00028.00028.2" spectrumNativeID="sample=1 period=1 cycle=1202 experiment=3" start_scan="28" end_scan="28" precursor_neutral_mass="845.342640" assumed_charge="2" index="55" retention_time_sec="682.5">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2667 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2668 <search_hit hit_rank="1" peptide="SIQWYM" peptide_prev_aa="R" peptide_next_aa="N" protein="XXX_gi|28849955|ref|NP_788795.1|" num_tot_proteins="1" num_matched_ions="3" tot_num_ions="10" calc_neutral_pep_mass="843.347277" massdiff="1.995364" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="84">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2669 <modification_info modified_peptide="SIQ[129]WYM[147]">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2670 <mod_aminoacid_mass position="3" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2671 <mod_aminoacid_mass position="6" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2672 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2673 <search_score name="xcorr" value="0.383"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2674 <search_score name="deltacn" value="0.009"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2675 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2676 <search_score name="spscore" value="38.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2677 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2678 <search_score name="expect" value="9.09E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2679 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2680 <search_hit hit_rank="2" peptide="SAEGGGSQPG" peptide_prev_aa="R" peptide_next_aa="G" protein="XXX_gi|528961840|ref|XP_005211303.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="18" calc_neutral_pep_mass="846.335541" massdiff="-0.992900" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="84">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2681 <modification_info modified_peptide="SAEGGGSQ[129]PG">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2682 <mod_aminoacid_mass position="8" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2683 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2684 <search_score name="xcorr" value="0.380"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2685 <search_score name="deltacn" value="0.079"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2686 <search_score name="deltacnstar" value="0.048"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2687 <search_score name="spscore" value="8.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2688 <search_score name="sprank" value="4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2689 <search_score name="expect" value="9.45E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2690 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2691 <search_hit hit_rank="3" peptide="SAEGGGSQPG" peptide_prev_aa="R" peptide_next_aa="G" protein="XXX_gi|528961840|ref|XP_005211303.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="18" calc_neutral_pep_mass="845.351525" massdiff="-0.008884" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="84">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2692 <search_score name="xcorr" value="0.361"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2693 <search_score name="deltacn" value="0.032"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2694 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2695 <search_score name="spscore" value="8.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2696 <search_score name="sprank" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2697 <search_score name="expect" value="1.16E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2698 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2699 <search_hit hit_rank="4" peptide="QYNFFGA" peptide_prev_aa="R" peptide_next_aa="S" protein="XXX_gi|358414198|ref|XP_002700672.2|" num_tot_proteins="4" num_matched_ions="1" tot_num_ions="12" calc_neutral_pep_mass="846.354820" massdiff="-1.012179" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="84">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2700 <modification_info modified_peptide="QYN[115]FFGA">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2701 <mod_aminoacid_mass position="3" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2702 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2703 <search_score name="xcorr" value="0.350"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2704 <search_score name="deltacn" value="0.018"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2705 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2706 <search_score name="spscore" value="2.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2707 <search_score name="sprank" value="8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2708 <search_score name="expect" value="1.32E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2709 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2710 <search_hit hit_rank="5" peptide="DLQDDIQ" peptide_prev_aa="K" peptide_next_aa="N" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="0" tot_num_ions="12" calc_neutral_pep_mass="846.360693" massdiff="-1.018053" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="84">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2711 <modification_info modified_peptide="DLQ[129]DDIQ">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2712 <mod_aminoacid_mass position="3" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2713 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2714 <search_score name="xcorr" value="0.344"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2715 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2716 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2717 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2718 <search_score name="sprank" value="14"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2719 <search_score name="expect" value="1.42E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2720 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2721 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2722 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2723 <spectrum_query spectrum="201208-378803.00028.00028.3" spectrumNativeID="sample=1 period=1 cycle=1202 experiment=3" start_scan="28" end_scan="28" precursor_neutral_mass="1268.013961" assumed_charge="3" index="56" retention_time_sec="682.5">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2724 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2725 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2726 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2727 <spectrum_query spectrum="201208-378803.00029.00029.3" spectrumNativeID="sample=1 period=1 cycle=1203 experiment=2" start_scan="29" end_scan="29" precursor_neutral_mass="1598.204501" assumed_charge="3" index="57" retention_time_sec="685.1">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2728 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2729 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2730 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2731 <spectrum_query spectrum="201208-378803.00029.00029.2" spectrumNativeID="sample=1 period=1 cycle=1203 experiment=2" start_scan="29" end_scan="29" precursor_neutral_mass="1065.469667" assumed_charge="2" index="58" retention_time_sec="685.1">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2732 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2733 <search_hit hit_rank="1" peptide="CTHYGNVSK" peptide_prev_aa="G" peptide_next_aa="D" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="16" calc_neutral_pep_mass="1065.454945" massdiff="0.014723" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="578">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2734 <modification_info modified_peptide="CTHYGNVSK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2735 <mod_aminoacid_mass position="1" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2736 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2737 <search_score name="xcorr" value="0.765"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2738 <search_score name="deltacn" value="0.430"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2739 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2740 <search_score name="spscore" value="14.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2741 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2742 <search_score name="expect" value="1.00E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2743 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2744 <search_hit hit_rank="2" peptide="ACSNKNLEK" peptide_prev_aa="Q" peptide_next_aa="L" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="16" calc_neutral_pep_mass="1064.480826" massdiff="0.988842" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="578">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2745 <modification_info modified_peptide="ACSNKN[115]LEK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2746 <mod_aminoacid_mass position="2" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2747 <mod_aminoacid_mass position="6" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2748 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2749 <search_score name="xcorr" value="0.436"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2750 <search_score name="deltacn" value="0.041"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2751 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2752 <search_score name="spscore" value="2.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2753 <search_score name="sprank" value="12"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2754 <search_score name="expect" value="6.25E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2755 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2756 <search_hit hit_rank="3" peptide="STEVDDMIR" peptide_prev_aa="S" peptide_next_aa="K" protein="gi|528968108|ref|XP_005212569.1|" num_tot_proteins="4" num_matched_ions="3" tot_num_ions="16" calc_neutral_pep_mass="1064.480825" massdiff="0.988843" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="578">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2757 <search_score name="xcorr" value="0.419"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2758 <search_score name="deltacn" value="0.038"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2759 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2760 <search_score name="spscore" value="13.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2761 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2762 <search_score name="expect" value="7.71E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2763 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2764 <search_hit hit_rank="4" peptide="ACSNKNLEK" peptide_prev_aa="Q" peptide_next_aa="L" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="16" calc_neutral_pep_mass="1065.464842" massdiff="0.004826" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="578">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2765 <modification_info modified_peptide="ACSN[115]KN[115]LEK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2766 <mod_aminoacid_mass position="2" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2767 <mod_aminoacid_mass position="4" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2768 <mod_aminoacid_mass position="6" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2769 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2770 <search_score name="xcorr" value="0.403"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2771 <search_score name="deltacn" value="0.330"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2772 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2773 <search_score name="spscore" value="0.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2774 <search_score name="sprank" value="17"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2775 <search_score name="expect" value="9.33E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2776 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2777 <search_hit hit_rank="5" peptide="RGCSEELSK" peptide_prev_aa="A" peptide_next_aa="E" protein="gi|358418103|ref|XP_600387.4|" num_tot_proteins="4" num_matched_ions="1" tot_num_ions="16" calc_neutral_pep_mass="1065.476074" massdiff="-0.006407" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="578">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2778 <modification_info modified_peptide="RGCSEELSK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2779 <mod_aminoacid_mass position="3" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2780 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2781 <search_score name="xcorr" value="0.270"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2782 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2783 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2784 <search_score name="spscore" value="3.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2785 <search_score name="sprank" value="9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2786 <search_score name="expect" value="4.55E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2787 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2788 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2789 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2790 <spectrum_query spectrum="201208-378803.00030.00030.2" spectrumNativeID="sample=1 period=1 cycle=1203 experiment=3" start_scan="30" end_scan="30" precursor_neutral_mass="1038.462310" assumed_charge="2" index="59" retention_time_sec="687.2">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2791 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2792 <search_hit hit_rank="1" peptide="VAGMEWEAK" peptide_prev_aa="S" peptide_next_aa="A" protein="gi|358414198|ref|XP_002700672.2|" num_tot_proteins="4" num_matched_ions="1" tot_num_ions="16" calc_neutral_pep_mass="1035.469517" massdiff="2.992793" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="458">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2793 <modification_info modified_peptide="VAGM[147]EWEAK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2794 <mod_aminoacid_mass position="4" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2795 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2796 <search_score name="xcorr" value="0.491"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2797 <search_score name="deltacn" value="0.171"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2798 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2799 <search_score name="spscore" value="1.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2800 <search_score name="sprank" value="16"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2801 <search_score name="expect" value="5.68E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2802 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2803 <search_hit hit_rank="2" peptide="AICDYRQI" peptide_prev_aa="K" peptide_next_aa="E" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="14" calc_neutral_pep_mass="1038.480431" massdiff="-0.018122" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="458">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2804 <modification_info modified_peptide="AICDYRQI">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2805 <mod_aminoacid_mass position="3" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2806 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2807 <search_score name="xcorr" value="0.407"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2808 <search_score name="deltacn" value="0.007"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2809 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2810 <search_score name="spscore" value="14.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2811 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2812 <search_score name="expect" value="1.46E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2813 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2814 <search_hit hit_rank="3" peptide="TQEFMDLR" peptide_prev_aa="I" peptide_next_aa="T" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="14" calc_neutral_pep_mass="1038.480431" massdiff="-0.018121" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="458">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2815 <search_score name="xcorr" value="0.404"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2816 <search_score name="deltacn" value="0.154"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2817 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2818 <search_score name="spscore" value="9.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2819 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2820 <search_score name="expect" value="1.51E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2821 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2822 <search_hit hit_rank="4" peptide="EESTSLQEN" peptide_prev_aa="R" peptide_next_aa="S" protein="XXX_gi|27806963|ref|NP_776953.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="16" calc_neutral_pep_mass="1035.435649" massdiff="3.026661" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="458">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2823 <search_score name="xcorr" value="0.342"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2824 <search_score name="deltacn" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2825 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2826 <search_score name="spscore" value="6.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2827 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2828 <search_score name="expect" value="3.05E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2829 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2830 <search_hit hit_rank="5" peptide="AEWEMGAVK" peptide_prev_aa="S" peptide_next_aa="A" protein="XXX_gi|358414198|ref|XP_002700672.2|" num_tot_proteins="4" num_matched_ions="2" tot_num_ions="16" calc_neutral_pep_mass="1035.469517" massdiff="2.992793" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="458">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2831 <modification_info modified_peptide="AEWEM[147]GAVK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2832 <mod_aminoacid_mass position="5" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2833 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2834 <search_score name="xcorr" value="0.342"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2835 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2836 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2837 <search_score name="spscore" value="5.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2838 <search_score name="sprank" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2839 <search_score name="expect" value="3.06E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2840 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2841 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2842 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2843 <spectrum_query spectrum="201208-378803.00030.00030.3" spectrumNativeID="sample=1 period=1 cycle=1203 experiment=3" start_scan="30" end_scan="30" precursor_neutral_mass="1557.693464" assumed_charge="3" index="60" retention_time_sec="687.2">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2844 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2845 <search_hit hit_rank="1" peptide="LGVQGQPPSTQGPYQ" peptide_prev_aa="R" peptide_next_aa="R" protein="gi|528961840|ref|XP_005211303.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="56" calc_neutral_pep_mass="1558.715119" massdiff="-1.021655" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="522">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2846 <modification_info modified_peptide="LGVQ[129]GQ[129]PPSTQ[129]GPYQ">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2847 <mod_aminoacid_mass position="4" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2848 <mod_aminoacid_mass position="6" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2849 <mod_aminoacid_mass position="11" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2850 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2851 <search_score name="xcorr" value="0.540"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2852 <search_score name="deltacn" value="0.056"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2853 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2854 <search_score name="spscore" value="4.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2855 <search_score name="sprank" value="6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2856 <search_score name="expect" value="2.08E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2857 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2858 <search_hit hit_rank="2" peptide="YPGQTSPPQGQVGLQ" peptide_prev_aa="R" peptide_next_aa="R" protein="XXX_gi|528961840|ref|XP_005211303.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="56" calc_neutral_pep_mass="1558.715119" massdiff="-1.021655" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="522">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2859 <modification_info modified_peptide="YPGQ[129]TSPPQ[129]GQ[129]VGLQ">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2860 <mod_aminoacid_mass position="4" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2861 <mod_aminoacid_mass position="9" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2862 <mod_aminoacid_mass position="11" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2863 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2864 <search_score name="xcorr" value="0.510"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2865 <search_score name="deltacn" value="0.014"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2866 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2867 <search_score name="spscore" value="11.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2868 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2869 <search_score name="expect" value="2.61E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2870 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2871 <search_hit hit_rank="3" peptide="EMMNGIIDPESYR" peptide_prev_aa="S" peptide_next_aa="I" protein="gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="48" calc_neutral_pep_mass="1554.669430" massdiff="3.024034" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="522">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2872 <modification_info modified_peptide="EMMN[115]GIIDPESYR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2873 <mod_aminoacid_mass position="4" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2874 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2875 <search_score name="xcorr" value="0.502"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2876 <search_score name="deltacn" value="0.038"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2877 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2878 <search_score name="spscore" value="0.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2879 <search_score name="sprank" value="26"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2880 <search_score name="expect" value="2.75E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2881 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2882 <search_hit hit_rank="4" peptide="LGVQGQPPSTQGPYQ" peptide_prev_aa="R" peptide_next_aa="R" protein="gi|528961840|ref|XP_005211303.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="56" calc_neutral_pep_mass="1558.715119" massdiff="-1.021655" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="522">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2883 <modification_info modified_peptide="LGVQ[129]GQ[129]PPSTQGPYQ[129]">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2884 <mod_aminoacid_mass position="4" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2885 <mod_aminoacid_mass position="6" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2886 <mod_aminoacid_mass position="15" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2887 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2888 <search_score name="xcorr" value="0.483"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2889 <search_score name="deltacn" value="0.037"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2890 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2891 <search_score name="spscore" value="1.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2892 <search_score name="sprank" value="18"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2893 <search_score name="expect" value="3.18E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2894 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2895 <search_hit hit_rank="5" peptide="LINFSCFHASYAK" peptide_prev_aa="A" peptide_next_aa="S" protein="gi|358414198|ref|XP_002700672.2|" num_tot_proteins="4" num_matched_ions="2" tot_num_ions="48" calc_neutral_pep_mass="1558.712617" massdiff="-1.019152" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="522">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2896 <modification_info modified_peptide="LIN[115]FSCFHASYAK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2897 <mod_aminoacid_mass position="3" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2898 <mod_aminoacid_mass position="6" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2899 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2900 <search_score name="xcorr" value="0.465"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2901 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2902 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2903 <search_score name="spscore" value="1.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2904 <search_score name="sprank" value="15"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2905 <search_score name="expect" value="3.63E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2906 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2907 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2908 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2909 <spectrum_query spectrum="201208-378803.00031.00031.3" spectrumNativeID="sample=1 period=1 cycle=1204 experiment=2" start_scan="31" end_scan="31" precursor_neutral_mass="1866.732833" assumed_charge="3" index="61" retention_time_sec="689.9">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2910 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2911 <search_hit hit_rank="1" peptide="NNGHSFNVEYDDSQDK" peptide_prev_aa="V" peptide_next_aa="A" protein="gi|30466252|ref|NP_848667.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="60" calc_neutral_pep_mass="1867.760899" massdiff="-1.028065" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="102">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2912 <search_score name="xcorr" value="0.476"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2913 <search_score name="deltacn" value="0.226"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2914 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2915 <search_score name="spscore" value="0.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2916 <search_score name="sprank" value="19"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2917 <search_score name="expect" value="5.70E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2918 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2919 <search_hit hit_rank="2" peptide="QNCDQFEKLGEYGFQ" peptide_prev_aa="K" peptide_next_aa="N" protein="gi|30794280|ref|NP_851335.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="56" calc_neutral_pep_mass="1864.746162" massdiff="1.986672" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="102">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2920 <modification_info modified_peptide="Q[129]N[115]CDQFEKLGEYGFQ">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2921 <mod_aminoacid_mass position="1" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2922 <mod_aminoacid_mass position="2" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2923 <mod_aminoacid_mass position="3" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2924 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2925 <search_score name="xcorr" value="0.368"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2926 <search_score name="deltacn" value="0.121"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2927 <search_score name="deltacnstar" value="0.008"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2928 <search_score name="spscore" value="1.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2929 <search_score name="sprank" value="8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2930 <search_score name="expect" value="1.78E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2931 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2932 <search_hit hit_rank="3" peptide="QNCDQFEKLGEYGFQ" peptide_prev_aa="K" peptide_next_aa="N" protein="gi|30794280|ref|NP_851335.1|" num_tot_proteins="1" num_matched_ions="4" tot_num_ions="56" calc_neutral_pep_mass="1865.730178" massdiff="1.002656" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="102">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2933 <modification_info modified_peptide="Q[129]N[115]CDQFEKLGEYGFQ[129]">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2934 <mod_aminoacid_mass position="1" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2935 <mod_aminoacid_mass position="2" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2936 <mod_aminoacid_mass position="3" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2937 <mod_aminoacid_mass position="15" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2938 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2939 <search_score name="xcorr" value="0.365"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2940 <search_score name="deltacn" value="0.114"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2941 <search_score name="deltacnstar" value="0.079"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2942 <search_score name="spscore" value="7.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2943 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2944 <search_score name="expect" value="1.84E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2945 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2946 <search_hit hit_rank="4" peptide="QNCDQFEKLGEYGFQ" peptide_prev_aa="K" peptide_next_aa="N" protein="gi|30794280|ref|NP_851335.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="56" calc_neutral_pep_mass="1865.730178" massdiff="1.002656" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="102">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2947 <modification_info modified_peptide="Q[129]N[115]CDQ[129]FEKLGEYGFQ">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2948 <mod_aminoacid_mass position="1" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2949 <mod_aminoacid_mass position="2" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2950 <mod_aminoacid_mass position="3" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2951 <mod_aminoacid_mass position="5" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2952 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2953 <search_score name="xcorr" value="0.336"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2954 <search_score name="deltacn" value="0.038"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2955 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2956 <search_score name="spscore" value="1.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2957 <search_score name="sprank" value="8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2958 <search_score name="expect" value="2.50E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2959 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2960 <search_hit hit_rank="5" peptide="TISDVFGQYHFNCME" peptide_prev_aa="K" peptide_next_aa="L" protein="XXX_gi|528968104|ref|XP_005212567.1|" num_tot_proteins="4" num_matched_ions="2" tot_num_ions="56" calc_neutral_pep_mass="1864.728388" massdiff="2.004445" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="102">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2961 <modification_info modified_peptide="TISDVFGQ[129]YHFNCM[147]E">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2962 <mod_aminoacid_mass position="8" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2963 <mod_aminoacid_mass position="13" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2964 <mod_aminoacid_mass position="14" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2965 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2966 <search_score name="xcorr" value="0.323"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2967 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2968 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2969 <search_score name="spscore" value="2.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2970 <search_score name="sprank" value="6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2971 <search_score name="expect" value="2.86E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2972 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2973 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2974 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2975 <spectrum_query spectrum="201208-378803.00031.00031.2" spectrumNativeID="sample=1 period=1 cycle=1204 experiment=2" start_scan="31" end_scan="31" precursor_neutral_mass="1244.488556" assumed_charge="2" index="62" retention_time_sec="689.9">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2976 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2977 <search_hit hit_rank="1" peptide="PDDLGRGGNEES" peptide_prev_aa="K" peptide_next_aa="T" protein="gi|528935739|ref|XP_005201142.1|" num_tot_proteins="2" num_matched_ions="3" tot_num_ions="22" calc_neutral_pep_mass="1245.510939" massdiff="-1.022383" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="82">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2978 <modification_info modified_peptide="PDDLGRGGN[115]EES">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2979 <mod_aminoacid_mass position="9" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2980 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2981 <search_score name="xcorr" value="0.475"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2982 <search_score name="deltacn" value="0.114"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2983 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2984 <search_score name="spscore" value="14.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2985 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2986 <search_score name="expect" value="2.73E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2987 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2988 <search_hit hit_rank="2" peptide="LNIDSMDCQK" peptide_prev_aa="I" peptide_next_aa="Y" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="18" calc_neutral_pep_mass="1241.479157" massdiff="3.009399" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="82">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2989 <modification_info modified_peptide="LN[115]IDSM[147]DCQ[129]K">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2990 <mod_aminoacid_mass position="2" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2991 <mod_aminoacid_mass position="6" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2992 <mod_aminoacid_mass position="8" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2993 <mod_aminoacid_mass position="9" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2994 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2995 <search_score name="xcorr" value="0.421"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2996 <search_score name="deltacn" value="0.114"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2997 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2998 <search_score name="spscore" value="6.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
2999 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3000 <search_score name="expect" value="5.15E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3001 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3002 <search_hit hit_rank="3" peptide="EMSCGKGESEK" peptide_prev_aa="A" peptide_next_aa="L" protein="gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="20" calc_neutral_pep_mass="1241.490404" massdiff="2.998152" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="82">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3003 <modification_info modified_peptide="EMSCGKGESEK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3004 <mod_aminoacid_mass position="4" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3005 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3006 <search_score name="xcorr" value="0.373"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3007 <search_score name="deltacn" value="0.018"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3008 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3009 <search_score name="spscore" value="1.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3010 <search_score name="sprank" value="6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3011 <search_score name="expect" value="9.05E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3012 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3013 <search_hit hit_rank="4" peptide="ESEGKGCSMEK" peptide_prev_aa="A" peptide_next_aa="L" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="20" calc_neutral_pep_mass="1241.490404" massdiff="2.998152" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="82">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3014 <modification_info modified_peptide="ESEGKGCSMEK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3015 <mod_aminoacid_mass position="7" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3016 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3017 <search_score name="xcorr" value="0.366"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3018 <search_score name="deltacn" value="0.079"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3019 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3020 <search_score name="spscore" value="1.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3021 <search_score name="sprank" value="6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3022 <search_score name="expect" value="9.78E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3023 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3024 <search_hit hit_rank="5" peptide="SCPTMKMDEK" peptide_prev_aa="V" peptide_next_aa="T" protein="gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="18" calc_neutral_pep_mass="1242.493032" massdiff="1.995524" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="82">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3025 <modification_info modified_peptide="SCPTMKM[147]DEK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3026 <mod_aminoacid_mass position="2" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3027 <mod_aminoacid_mass position="7" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3028 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3029 <search_score name="xcorr" value="0.337"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3030 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3031 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3032 <search_score name="spscore" value="2.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3033 <search_score name="sprank" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3034 <search_score name="expect" value="1.37E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3035 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3036 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3037 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3038 <spectrum_query spectrum="201208-378803.00032.00032.3" spectrumNativeID="sample=1 period=1 cycle=1204 experiment=3" start_scan="32" end_scan="32" precursor_neutral_mass="2165.295836" assumed_charge="3" index="63" retention_time_sec="692.0">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3039 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3040 <search_hit hit_rank="1" peptide="EVQNPRRSIPLGIVITIFI" peptide_prev_aa="K" peptide_next_aa="G" protein="gi|139948503|ref|NP_001077142.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="72" calc_neutral_pep_mass="2165.257225" massdiff="0.038611" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="10">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3041 <modification_info modified_peptide="EVQ[129]NPRRSIPLGIVITIFI">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3042 <mod_aminoacid_mass position="3" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3043 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3044 <search_score name="xcorr" value="0.118"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3045 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3046 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3047 <search_score name="spscore" value="0.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3048 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3049 <search_score name="expect" value="1.43E+002"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3050 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3051 <search_hit hit_rank="2" peptide="EVQNPRRSIPLGIVITIFI" peptide_prev_aa="K" peptide_next_aa="G" protein="gi|139948503|ref|NP_001077142.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="72" calc_neutral_pep_mass="2165.257225" massdiff="0.038611" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="10">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3052 <modification_info modified_peptide="EVQN[115]PRRSIPLGIVITIFI">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3053 <mod_aminoacid_mass position="4" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3054 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3055 <search_score name="xcorr" value="0.118"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3056 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3057 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3058 <search_score name="spscore" value="0.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3059 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3060 <search_score name="expect" value="1.44E+002"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3061 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3062 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3063 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3064 <spectrum_query spectrum="201208-378803.00032.00032.2" spectrumNativeID="sample=1 period=1 cycle=1204 experiment=3" start_scan="32" end_scan="32" precursor_neutral_mass="1443.530557" assumed_charge="2" index="64" retention_time_sec="692.0">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3065 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3066 <search_hit hit_rank="1" peptide="LFEESEDGMEEQ" peptide_prev_aa="R" peptide_next_aa="V" protein="XXX_gi|528921178|ref|XP_592304.7|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="22" calc_neutral_pep_mass="1442.539522" massdiff="0.991036" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="6">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3067 <modification_info modified_peptide="LFEESEDGMEEQ[129]">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3068 <mod_aminoacid_mass position="12" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3069 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3070 <search_score name="xcorr" value="0.148"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3071 <search_score name="deltacn" value="0.153"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3072 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3073 <search_score name="spscore" value="2.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3074 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3075 <search_score name="expect" value="6.12E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3076 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3077 <search_hit hit_rank="2" peptide="EEMGDESEEFLQ" peptide_prev_aa="R" peptide_next_aa="V" protein="gi|528921178|ref|XP_592304.7|" num_tot_proteins="3" num_matched_ions="0" tot_num_ions="22" calc_neutral_pep_mass="1442.539522" massdiff="0.991036" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="6">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3078 <modification_info modified_peptide="EEMGDESEEFLQ[129]">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3079 <mod_aminoacid_mass position="12" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3080 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3081 <search_score name="xcorr" value="0.125"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3082 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3083 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3084 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3085 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3086 <search_score name="expect" value="8.90E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3087 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3088 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3089 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3090 <spectrum_query spectrum="201208-378803.00033.00033.2" spectrumNativeID="sample=1 period=1 cycle=1204 experiment=4" start_scan="33" end_scan="33" precursor_neutral_mass="926.360519" assumed_charge="2" index="65" retention_time_sec="694.2">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3091 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3092 <search_hit hit_rank="1" peptide="DFDSADSGL" peptide_prev_aa="R" peptide_next_aa="L" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="16" calc_neutral_pep_mass="925.366506" massdiff="0.994012" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="290">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3093 <search_score name="xcorr" value="0.592"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3094 <search_score name="deltacn" value="0.243"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3095 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3096 <search_score name="spscore" value="27.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3097 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3098 <search_score name="expect" value="1.00E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3099 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3100 <search_hit hit_rank="2" peptide="TSEMDVTE" peptide_prev_aa="K" peptide_next_aa="V" protein="XXX_gi|27806963|ref|NP_776953.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="14" calc_neutral_pep_mass="926.353878" massdiff="0.006641" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="290">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3101 <modification_info modified_peptide="TSEM[147]DVTE">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3102 <mod_aminoacid_mass position="4" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3103 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3104 <search_score name="xcorr" value="0.449"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3105 <search_score name="deltacn" value="0.082"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3106 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3107 <search_score name="spscore" value="15.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3108 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3109 <search_score name="expect" value="1.84E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3110 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3111 <search_hit hit_rank="3" peptide="TVDMESTE" peptide_prev_aa="K" peptide_next_aa="V" protein="gi|27806963|ref|NP_776953.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="14" calc_neutral_pep_mass="926.353878" massdiff="0.006641" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="290">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3112 <modification_info modified_peptide="TVDM[147]ESTE">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3113 <mod_aminoacid_mass position="4" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3114 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3115 <search_score name="xcorr" value="0.412"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3116 <search_score name="deltacn" value="0.009"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3117 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3118 <search_score name="spscore" value="12.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3119 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3120 <search_score name="expect" value="3.03E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3121 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3122 <search_hit hit_rank="4" peptide="FCVGSELD" peptide_prev_aa="R" peptide_next_aa="I" protein="XXX_gi|358418103|ref|XP_600387.4|" num_tot_proteins="4" num_matched_ions="1" tot_num_ions="14" calc_neutral_pep_mass="926.369149" massdiff="-0.008631" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="290">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3123 <modification_info modified_peptide="FCVGSELD">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3124 <mod_aminoacid_mass position="2" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3125 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3126 <search_score name="xcorr" value="0.408"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3127 <search_score name="deltacn" value="0.237"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3128 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3129 <search_score name="spscore" value="5.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3130 <search_score name="sprank" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3131 <search_score name="expect" value="3.18E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3132 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3133 <search_hit hit_rank="5" peptide="DSMAQDEK" peptide_prev_aa="Q" peptide_next_aa="E" protein="gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="14" calc_neutral_pep_mass="923.354227" massdiff="3.006291" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="290">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3134 <modification_info modified_peptide="DSMAQ[129]DEK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3135 <mod_aminoacid_mass position="5" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3136 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3137 <search_score name="xcorr" value="0.311"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3138 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3139 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3140 <search_score name="spscore" value="1.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3141 <search_score name="sprank" value="9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3142 <search_score name="expect" value="1.19E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3143 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3144 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3145 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3146 <spectrum_query spectrum="201208-378803.00033.00033.3" spectrumNativeID="sample=1 period=1 cycle=1204 experiment=4" start_scan="33" end_scan="33" precursor_neutral_mass="1389.540778" assumed_charge="3" index="66" retention_time_sec="694.2">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3147 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3148 <search_hit hit_rank="1" peptide="VNSGCMAMENKL" peptide_prev_aa="R" peptide_next_aa="E" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="44" calc_neutral_pep_mass="1386.546510" massdiff="2.994269" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="152">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3149 <modification_info modified_peptide="VN[115]SGCM[147]AM[147]ENKL">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3150 <mod_aminoacid_mass position="2" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3151 <mod_aminoacid_mass position="5" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3152 <mod_aminoacid_mass position="6" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3153 <mod_aminoacid_mass position="8" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3154 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3155 <search_score name="xcorr" value="0.314"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3156 <search_score name="deltacn" value="0.022"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3157 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3158 <search_score name="spscore" value="0.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3159 <search_score name="sprank" value="7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3160 <search_score name="expect" value="1.29E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3161 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3162 <search_hit hit_rank="2" peptide="DMVTQFMETADS" peptide_prev_aa="R" peptide_next_aa="T" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="44" calc_neutral_pep_mass="1390.526834" massdiff="-0.986056" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="152">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3163 <modification_info modified_peptide="DM[147]VTQ[129]FMETADS">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3164 <mod_aminoacid_mass position="2" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3165 <mod_aminoacid_mass position="5" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3166 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3167 <search_score name="xcorr" value="0.307"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3168 <search_score name="deltacn" value="0.049"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3169 <search_score name="deltacnstar" value="0.018"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3170 <search_score name="spscore" value="1.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3171 <search_score name="sprank" value="4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3172 <search_score name="expect" value="1.42E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3173 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3174 <search_hit hit_rank="3" peptide="DMVTQFMETADS" peptide_prev_aa="R" peptide_next_aa="T" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="44" calc_neutral_pep_mass="1389.542818" massdiff="-0.002040" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="152">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3175 <modification_info modified_peptide="DM[147]VTQFMETADS">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3176 <mod_aminoacid_mass position="2" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3177 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3178 <search_score name="xcorr" value="0.302"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3179 <search_score name="deltacn" value="0.032"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3180 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3181 <search_score name="spscore" value="4.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3182 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3183 <search_score name="expect" value="1.54E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3184 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3185 <search_hit hit_rank="4" peptide="FGRGCESCVYPG" peptide_prev_aa="K" peptide_next_aa="Q" protein="XXX_gi|528908812|ref|XP_609847.5|" num_tot_proteins="12" num_matched_ions="1" tot_num_ions="44" calc_neutral_pep_mass="1389.532938" massdiff="0.007840" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="152">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3186 <modification_info modified_peptide="FGRGCESCVYPG">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3187 <mod_aminoacid_mass position="5" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3188 <mod_aminoacid_mass position="8" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3189 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3190 <search_score name="xcorr" value="0.292"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3191 <search_score name="deltacn" value="0.009"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3192 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3193 <search_score name="spscore" value="0.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3194 <search_score name="sprank" value="7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3195 <search_score name="expect" value="1.76E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3196 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3197 <search_hit hit_rank="5" peptide="EIEKMCNFHY" peptide_prev_aa="R" peptide_next_aa="Q" protein="gi|528968104|ref|XP_005212567.1|" num_tot_proteins="4" num_matched_ions="1" tot_num_ions="36" calc_neutral_pep_mass="1386.558409" massdiff="2.982369" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="152">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3198 <modification_info modified_peptide="EIEKM[147]CNFHY">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3199 <mod_aminoacid_mass position="5" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3200 <mod_aminoacid_mass position="6" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3201 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3202 <search_score name="xcorr" value="0.289"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3203 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3204 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3205 <search_score name="spscore" value="1.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3206 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3207 <search_score name="expect" value="1.83E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3208 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3209 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3210 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3211 <spectrum_query spectrum="201208-378803.00034.00034.3" spectrumNativeID="sample=1 period=1 cycle=1206 experiment=2" start_scan="34" end_scan="34" precursor_neutral_mass="1866.343049" assumed_charge="3" index="67" retention_time_sec="697.3">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3212 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3213 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3214 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3215 <spectrum_query spectrum="201208-378803.00034.00034.2" spectrumNativeID="sample=1 period=1 cycle=1206 experiment=2" start_scan="34" end_scan="34" precursor_neutral_mass="1244.228700" assumed_charge="2" index="68" retention_time_sec="697.3">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3216 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3217 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3218 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3219 <spectrum_query spectrum="201208-378803.00035.00035.3" spectrumNativeID="sample=1 period=1 cycle=1207 experiment=2" start_scan="35" end_scan="35" precursor_neutral_mass="1617.715550" assumed_charge="3" index="69" retention_time_sec="700.0">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3220 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3221 <search_hit hit_rank="1" peptide="DGFGPTMGLISMYSK" peptide_prev_aa="A" peptide_next_aa="T" protein="XXX_gi|32880221|ref|NP_872593.1|" num_tot_proteins="1" num_matched_ions="4" tot_num_ions="56" calc_neutral_pep_mass="1618.737101" massdiff="-1.021551" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="430">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3222 <modification_info modified_peptide="DGFGPTM[147]GLISMYSK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3223 <mod_aminoacid_mass position="7" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3224 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3225 <search_score name="xcorr" value="0.751"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3226 <search_score name="deltacn" value="0.051"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3227 <search_score name="deltacnstar" value="0.041"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3228 <search_score name="spscore" value="3.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3229 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3230 <search_score name="expect" value="4.50E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3231 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3232 <search_hit hit_rank="2" peptide="DGFGPTMGLISMYSK" peptide_prev_aa="A" peptide_next_aa="T" protein="XXX_gi|32880221|ref|NP_872593.1|" num_tot_proteins="1" num_matched_ions="3" tot_num_ions="56" calc_neutral_pep_mass="1618.737101" massdiff="-1.021551" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="430">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3233 <modification_info modified_peptide="DGFGPTMGLISM[147]YSK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3234 <mod_aminoacid_mass position="12" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3235 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3236 <search_score name="xcorr" value="0.721"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3237 <search_score name="deltacn" value="0.010"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3238 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3239 <search_score name="spscore" value="2.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3240 <search_score name="sprank" value="7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3241 <search_score name="expect" value="5.65E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3242 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3243 <search_hit hit_rank="3" peptide="RDVTHESGQDDSSGK" peptide_prev_aa="W" peptide_next_aa="K" protein="XXX_gi|30466252|ref|NP_848667.1|" num_tot_proteins="1" num_matched_ions="3" tot_num_ions="56" calc_neutral_pep_mass="1617.686672" massdiff="0.028878" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="430">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3244 <modification_info modified_peptide="RDVTHESGQ[129]DDSSGK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3245 <mod_aminoacid_mass position="9" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3246 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3247 <search_score name="xcorr" value="0.713"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3248 <search_score name="deltacn" value="0.192"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3249 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3250 <search_score name="spscore" value="2.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3251 <search_score name="sprank" value="4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3252 <search_score name="expect" value="5.96E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3253 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3254 <search_hit hit_rank="4" peptide="NEAQEDGPTGEGNAVK" peptide_prev_aa="V" peptide_next_aa="G" protein="XXX_gi|358414198|ref|XP_002700672.2|" num_tot_proteins="4" num_matched_ions="3" tot_num_ions="60" calc_neutral_pep_mass="1616.680190" massdiff="1.035360" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="430">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3255 <modification_info modified_peptide="N[115]EAQ[129]EDGPTGEGNAVK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3256 <mod_aminoacid_mass position="1" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3257 <mod_aminoacid_mass position="4" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3258 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3259 <search_score name="xcorr" value="0.577"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3260 <search_score name="deltacn" value="0.014"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3261 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3262 <search_score name="spscore" value="1.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3263 <search_score name="sprank" value="9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3264 <search_score name="expect" value="1.64E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3265 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3266 <search_hit hit_rank="5" peptide="PHTSSRQRSEMMR" peptide_prev_aa="K" peptide_next_aa="K" protein="gi|528928354|ref|XP_005193233.1|" num_tot_proteins="1" num_matched_ions="4" tot_num_ions="48" calc_neutral_pep_mass="1617.746377" massdiff="-0.030828" num_tol_term="2" num_missed_cleavages="2" num_matched_peptides="430">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3267 <modification_info modified_peptide="PHTSSRQRSEMM[147]R">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3268 <mod_aminoacid_mass position="12" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3269 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3270 <search_score name="xcorr" value="0.569"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3271 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3272 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3273 <search_score name="spscore" value="3.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3274 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3275 <search_score name="expect" value="1.75E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3276 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3277 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3278 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3279 <spectrum_query spectrum="201208-378803.00035.00035.2" spectrumNativeID="sample=1 period=1 cycle=1207 experiment=2" start_scan="35" end_scan="35" precursor_neutral_mass="1078.477033" assumed_charge="2" index="70" retention_time_sec="700.0">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3280 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3281 <search_hit hit_rank="1" peptide="LTSQLQQEQ" peptide_prev_aa="R" peptide_next_aa="Q" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="0" tot_num_ions="16" calc_neutral_pep_mass="1076.487351" massdiff="1.989682" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="626">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3282 <modification_info modified_peptide="LTSQ[129]LQ[129]Q[129]EQ">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3283 <mod_aminoacid_mass position="4" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3284 <mod_aminoacid_mass position="6" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3285 <mod_aminoacid_mass position="7" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3286 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3287 <search_score name="xcorr" value="0.419"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3288 <search_score name="deltacn" value="0.083"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3289 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3290 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3291 <search_score name="sprank" value="21"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3292 <search_score name="expect" value="1.58E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3293 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3294 <search_hit hit_rank="2" peptide="SDQLLDELM" peptide_prev_aa="R" peptide_next_aa="D" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="16" calc_neutral_pep_mass="1079.469243" massdiff="-0.992210" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="626">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3295 <modification_info modified_peptide="SDQ[129]LLDELM[147]">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3296 <mod_aminoacid_mass position="3" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3297 <mod_aminoacid_mass position="9" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3298 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3299 <search_score name="xcorr" value="0.384"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3300 <search_score name="deltacn" value="0.038"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3301 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3302 <search_score name="spscore" value="2.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3303 <search_score name="sprank" value="9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3304 <search_score name="expect" value="2.26E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3305 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3306 <search_hit hit_rank="3" peptide="GMSDVAQEKN" peptide_prev_aa="K" peptide_next_aa="R" protein="gi|528921178|ref|XP_592304.7|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="18" calc_neutral_pep_mass="1078.460090" massdiff="0.016944" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="626">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3307 <modification_info modified_peptide="GMSDVAQEKN[115]">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3308 <mod_aminoacid_mass position="10" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3309 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3310 <search_score name="xcorr" value="0.369"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3311 <search_score name="deltacn" value="0.017"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3312 <search_score name="deltacnstar" value="0.008"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3313 <search_score name="spscore" value="2.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3314 <search_score name="sprank" value="11"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3315 <search_score name="expect" value="2.62E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3316 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3317 <search_hit hit_rank="4" peptide="GMSDVAQEKN" peptide_prev_aa="K" peptide_next_aa="R" protein="gi|528921178|ref|XP_592304.7|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="18" calc_neutral_pep_mass="1078.460090" massdiff="0.016944" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="626">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3318 <modification_info modified_peptide="GMSDVAQ[129]EKN">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3319 <mod_aminoacid_mass position="7" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3320 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3321 <search_score name="xcorr" value="0.366"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3322 <search_score name="deltacn" value="0.009"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3323 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3324 <search_score name="spscore" value="2.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3325 <search_score name="sprank" value="11"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3326 <search_score name="expect" value="2.70E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3327 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3328 <search_hit hit_rank="5" peptide="ESTEELQQI" peptide_prev_aa="K" peptide_next_aa="R" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="16" calc_neutral_pep_mass="1077.471366" massdiff="1.005667" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="626">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3329 <modification_info modified_peptide="ESTEELQ[129]Q[129]I">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3330 <mod_aminoacid_mass position="7" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3331 <mod_aminoacid_mass position="8" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3332 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3333 <search_score name="xcorr" value="0.363"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3334 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3335 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3336 <search_score name="spscore" value="2.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3337 <search_score name="sprank" value="10"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3338 <search_score name="expect" value="2.80E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3339 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3340 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3341 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3342 <spectrum_query spectrum="201208-378803.00036.00036.2" spectrumNativeID="sample=1 period=1 cycle=1207 experiment=3" start_scan="36" end_scan="36" precursor_neutral_mass="932.457606" assumed_charge="2" index="71" retention_time_sec="702.1">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3343 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3344 <search_hit hit_rank="1" peptide="RLNLSSNQ" peptide_prev_aa="R" peptide_next_aa="I" protein="gi|528921178|ref|XP_592304.7|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="14" calc_neutral_pep_mass="931.472309" massdiff="0.985296" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="846">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3345 <modification_info modified_peptide="RLNLSSN[115]Q">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3346 <mod_aminoacid_mass position="7" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3347 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3348 <search_score name="xcorr" value="0.467"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3349 <search_score name="deltacn" value="0.203"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3350 <search_score name="deltacnstar" value="0.065"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3351 <search_score name="spscore" value="13.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3352 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3353 <search_score name="expect" value="5.29E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3354 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3355 <search_hit hit_rank="2" peptide="RLNLSSNQ" peptide_prev_aa="R" peptide_next_aa="I" protein="gi|528921178|ref|XP_592304.7|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="14" calc_neutral_pep_mass="931.472309" massdiff="0.985296" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="846">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3356 <modification_info modified_peptide="RLNLSSNQ[129]">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3357 <mod_aminoacid_mass position="8" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3358 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3359 <search_score name="xcorr" value="0.437"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3360 <search_score name="deltacn" value="0.148"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3361 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3362 <search_score name="spscore" value="13.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3363 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3364 <search_score name="expect" value="7.48E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3365 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3366 <search_hit hit_rank="3" peptide="DLPFLSNE" peptide_prev_aa="K" peptide_next_aa="Y" protein="gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="14" calc_neutral_pep_mass="933.444363" massdiff="-0.986757" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="846">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3367 <search_score name="xcorr" value="0.372"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3368 <search_score name="deltacn" value="0.055"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3369 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3370 <search_score name="spscore" value="6.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3371 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3372 <search_score name="expect" value="1.58E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3373 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3374 <search_hit hit_rank="4" peptide="RLNLSSNQ" peptide_prev_aa="R" peptide_next_aa="I" protein="gi|528921178|ref|XP_592304.7|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="14" calc_neutral_pep_mass="932.456325" massdiff="0.001280" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="846">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3375 <modification_info modified_peptide="RLN[115]LSSN[115]Q">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3376 <mod_aminoacid_mass position="3" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3377 <mod_aminoacid_mass position="7" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3378 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3379 <search_score name="xcorr" value="0.352"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3380 <search_score name="deltacn" value="0.009"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3381 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3382 <search_score name="spscore" value="6.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3383 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3384 <search_score name="expect" value="2.00E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3385 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3386 <search_hit hit_rank="5" peptide="PKEGTHTY" peptide_prev_aa="R" peptide_next_aa="L" protein="XXX_gi|528908812|ref|XP_609847.5|" num_tot_proteins="24" num_matched_ions="1" tot_num_ions="14" calc_neutral_pep_mass="931.439946" massdiff="1.017660" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="846">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3387 <search_score name="xcorr" value="0.348"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3388 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3389 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3390 <search_score name="spscore" value="5.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3391 <search_score name="sprank" value="7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3392 <search_score name="expect" value="2.07E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3393 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3394 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3395 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3396 <spectrum_query spectrum="201208-378803.00036.00036.3" spectrumNativeID="sample=1 period=1 cycle=1207 experiment=3" start_scan="36" end_scan="36" precursor_neutral_mass="1398.686408" assumed_charge="3" index="72" retention_time_sec="702.1">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3397 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3398 <search_hit hit_rank="1" peptide="PRNVKPGSVSGTNS" peptide_prev_aa="R" peptide_next_aa="L" protein="XXX_gi|358414198|ref|XP_002700672.2|" num_tot_proteins="4" num_matched_ions="2" tot_num_ions="52" calc_neutral_pep_mass="1399.705557" massdiff="-1.019148" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="910">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3399 <modification_info modified_peptide="PRN[115]VKPGSVSGTNS">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3400 <mod_aminoacid_mass position="3" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3401 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3402 <search_score name="xcorr" value="0.541"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3403 <search_score name="deltacn" value="0.083"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3404 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3405 <search_score name="spscore" value="2.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3406 <search_score name="sprank" value="4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3407 <search_score name="expect" value="4.28E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3408 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3409 <search_hit hit_rank="2" peptide="LQQSDGFRYKR" peptide_prev_aa="N" peptide_next_aa="L" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="2" num_matched_ions="2" tot_num_ions="40" calc_neutral_pep_mass="1397.705163" massdiff="0.981246" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="910">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3410 <modification_info modified_peptide="LQQ[129]SDGFRYKR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3411 <mod_aminoacid_mass position="3" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3412 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3413 <search_score name="xcorr" value="0.496"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3414 <search_score name="deltacn" value="0.135"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3415 <search_score name="deltacnstar" value="0.073"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3416 <search_score name="spscore" value="2.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3417 <search_score name="sprank" value="10"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3418 <search_score name="expect" value="6.83E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3419 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3420 <search_hit hit_rank="3" peptide="LQQSDGFRYKR" peptide_prev_aa="N" peptide_next_aa="L" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="2" num_matched_ions="2" tot_num_ions="40" calc_neutral_pep_mass="1397.705163" massdiff="0.981246" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="910">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3421 <modification_info modified_peptide="LQ[129]QSDGFRYKR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3422 <mod_aminoacid_mass position="2" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3423 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3424 <search_score name="xcorr" value="0.460"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3425 <search_score name="deltacn" value="0.067"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3426 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3427 <search_score name="spscore" value="2.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3428 <search_score name="sprank" value="10"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3429 <search_score name="expect" value="9.94E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3430 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3431 <search_hit hit_rank="4" peptide="QQPPASTSQTLDK" peptide_prev_aa="E" peptide_next_aa="N" protein="gi|297486082|ref|XP_002695413.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="48" calc_neutral_pep_mass="1399.694323" massdiff="-1.007915" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="910">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3432 <search_score name="xcorr" value="0.429"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3433 <search_score name="deltacn" value="0.169"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3434 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3435 <search_score name="spscore" value="2.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3436 <search_score name="sprank" value="8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3437 <search_score name="expect" value="1.37E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3438 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3439 <search_hit hit_rank="5" peptide="QDHKVDFILQR" peptide_prev_aa="G" peptide_next_aa="E" protein="gi|528961840|ref|XP_005211303.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="40" calc_neutral_pep_mass="1399.709580" massdiff="-1.023171" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="910">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3440 <modification_info modified_peptide="Q[129]DHKVDFILQ[129]R">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3441 <mod_aminoacid_mass position="1" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3442 <mod_aminoacid_mass position="10" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3443 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3444 <search_score name="xcorr" value="0.357"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3445 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3446 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3447 <search_score name="spscore" value="5.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3448 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3449 <search_score name="expect" value="2.88E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3450 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3451 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3452 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3453 <spectrum_query spectrum="201208-378803.00037.00037.3" spectrumNativeID="sample=1 period=1 cycle=1208 experiment=2" start_scan="37" end_scan="37" precursor_neutral_mass="1860.744174" assumed_charge="3" index="73" retention_time_sec="704.7">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3454 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3455 <search_hit hit_rank="1" peptide="SLGQDSETYLQSEICE" peptide_prev_aa="K" peptide_next_aa="F" protein="gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="4" tot_num_ions="60" calc_neutral_pep_mass="1859.761871" massdiff="0.982304" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="112">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3456 <modification_info modified_peptide="SLGQ[129]DSETYLQSEICE">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3457 <mod_aminoacid_mass position="4" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3458 <mod_aminoacid_mass position="15" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3459 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3460 <search_score name="xcorr" value="0.561"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3461 <search_score name="deltacn" value="0.071"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3462 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3463 <search_score name="spscore" value="2.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3464 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3465 <search_score name="expect" value="7.26E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3466 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3467 <search_hit hit_rank="2" peptide="EMFSQLADLDDELDGM" peptide_prev_aa="R" peptide_next_aa="G" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="60" calc_neutral_pep_mass="1860.728098" massdiff="0.016076" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="112">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3468 <modification_info modified_peptide="EM[147]FSQ[129]LADLDDELDGM[147]">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3469 <mod_aminoacid_mass position="2" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3470 <mod_aminoacid_mass position="5" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3471 <mod_aminoacid_mass position="16" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3472 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3473 <search_score name="xcorr" value="0.521"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3474 <search_score name="deltacn" value="0.001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3475 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3476 <search_score name="spscore" value="0.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3477 <search_score name="sprank" value="17"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3478 <search_score name="expect" value="9.93E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3479 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3480 <search_hit hit_rank="3" peptide="SRCSRESLTEEDSSSE" peptide_prev_aa="-" peptide_next_aa="R" protein="XXX_gi|219804516|ref|NP_001137332.1|" num_tot_proteins="1" num_matched_ions="3" tot_num_ions="60" calc_neutral_pep_mass="1858.748680" massdiff="1.995494" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="112">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3481 <modification_info modified_peptide="SRCSRESLTEEDSSSE">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3482 <mod_aminoacid_mass position="3" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3483 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3484 <search_score name="xcorr" value="0.521"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3485 <search_score name="deltacn" value="0.059"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3486 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3487 <search_score name="spscore" value="1.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3488 <search_score name="sprank" value="4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3489 <search_score name="expect" value="9.97E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3490 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3491 <search_hit hit_rank="4" peptide="SLGQDSETYLQSEICE" peptide_prev_aa="K" peptide_next_aa="F" protein="gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="3" tot_num_ions="60" calc_neutral_pep_mass="1860.745887" massdiff="-0.001712" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="112">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3492 <modification_info modified_peptide="SLGQ[129]DSETYLQ[129]SEICE">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3493 <mod_aminoacid_mass position="4" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3494 <mod_aminoacid_mass position="11" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3495 <mod_aminoacid_mass position="15" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3496 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3497 <search_score name="xcorr" value="0.490"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3498 <search_score name="deltacn" value="0.029"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3499 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3500 <search_score name="spscore" value="1.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3501 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3502 <search_score name="expect" value="1.27E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3503 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3504 <search_hit hit_rank="5" peptide="ELKNEMAMCGSNVRQG" peptide_prev_aa="K" peptide_next_aa="I" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="4" tot_num_ions="60" calc_neutral_pep_mass="1857.754271" massdiff="2.989903" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="112">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3505 <modification_info modified_peptide="ELKNEM[147]AM[147]CGSN[115]VRQ[129]G">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3506 <mod_aminoacid_mass position="6" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3507 <mod_aminoacid_mass position="8" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3508 <mod_aminoacid_mass position="9" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3509 <mod_aminoacid_mass position="12" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3510 <mod_aminoacid_mass position="15" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3511 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3512 <search_score name="xcorr" value="0.476"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3513 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3514 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3515 <search_score name="spscore" value="3.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3516 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3517 <search_score name="expect" value="1.42E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3518 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3519 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3520 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3521 <spectrum_query spectrum="201208-378803.00037.00037.2" spectrumNativeID="sample=1 period=1 cycle=1208 experiment=2" start_scan="37" end_scan="37" precursor_neutral_mass="1240.496116" assumed_charge="2" index="74" retention_time_sec="704.7">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3522 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3523 <search_hit hit_rank="1" peptide="TPDVMMSDTEN" peptide_prev_aa="K" peptide_next_aa="D" protein="XXX_gi|358414198|ref|XP_002700672.2|" num_tot_proteins="4" num_matched_ions="2" tot_num_ions="20" calc_neutral_pep_mass="1238.479504" massdiff="2.016612" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="380">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3524 <search_score name="xcorr" value="0.666"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3525 <search_score name="deltacn" value="0.262"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3526 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3527 <search_score name="spscore" value="2.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3528 <search_score name="sprank" value="4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3529 <search_score name="expect" value="1.00E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3530 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3531 <search_hit hit_rank="2" peptide="ESEGKGCSMEK" peptide_prev_aa="A" peptide_next_aa="L" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="20" calc_neutral_pep_mass="1241.490404" massdiff="-0.994287" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="380">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3532 <modification_info modified_peptide="ESEGKGCSMEK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3533 <mod_aminoacid_mass position="7" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3534 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3535 <search_score name="xcorr" value="0.492"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3536 <search_score name="deltacn" value="0.134"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3537 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3538 <search_score name="spscore" value="0.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3539 <search_score name="sprank" value="9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3540 <search_score name="expect" value="4.55E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3541 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3542 <search_hit hit_rank="3" peptide="TNAQEKQCTR" peptide_prev_aa="L" peptide_next_aa="E" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="18" calc_neutral_pep_mass="1238.508498" massdiff="1.987619" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="380">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3543 <modification_info modified_peptide="TN[115]AQ[129]EKQ[129]CTR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3544 <mod_aminoacid_mass position="2" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3545 <mod_aminoacid_mass position="4" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3546 <mod_aminoacid_mass position="7" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3547 <mod_aminoacid_mass position="8" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3548 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3549 <search_score name="xcorr" value="0.426"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3550 <search_score name="deltacn" value="0.015"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3551 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3552 <search_score name="spscore" value="2.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3553 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3554 <search_score name="expect" value="9.14E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3555 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3556 <search_hit hit_rank="4" peptide="QCDMSDINLK" peptide_prev_aa="I" peptide_next_aa="Y" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="0" tot_num_ions="18" calc_neutral_pep_mass="1241.479157" massdiff="-0.983040" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="380">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3557 <modification_info modified_peptide="Q[129]CDM[147]SDIN[115]LK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3558 <mod_aminoacid_mass position="1" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3559 <mod_aminoacid_mass position="2" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3560 <mod_aminoacid_mass position="4" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3561 <mod_aminoacid_mass position="8" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3562 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3563 <search_score name="xcorr" value="0.420"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3564 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3565 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3566 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3567 <search_score name="sprank" value="14"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3568 <search_score name="expect" value="9.77E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3569 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3570 <search_hit hit_rank="5" peptide="QCDMSDINLK" peptide_prev_aa="I" peptide_next_aa="Y" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="0" tot_num_ions="18" calc_neutral_pep_mass="1240.495141" massdiff="0.000976" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="380">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3571 <modification_info modified_peptide="QCDM[147]SDIN[115]LK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3572 <mod_aminoacid_mass position="2" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3573 <mod_aminoacid_mass position="4" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3574 <mod_aminoacid_mass position="8" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3575 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3576 <search_score name="xcorr" value="0.417"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3577 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3578 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3579 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3580 <search_score name="sprank" value="14"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3581 <search_score name="expect" value="1.01E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3582 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3583 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3584 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3585 <spectrum_query spectrum="201208-378803.00038.00038.2" spectrumNativeID="sample=1 period=1 cycle=1208 experiment=3" start_scan="38" end_scan="38" precursor_neutral_mass="978.393545" assumed_charge="2" index="75" retention_time_sec="706.8">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3586 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3587 <search_hit hit_rank="1" peptide="SSAPGEYHQ" peptide_prev_aa="R" peptide_next_aa="V" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="16" calc_neutral_pep_mass="975.393390" massdiff="3.000155" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="220">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3588 <modification_info modified_peptide="SSAPGEYHQ[129]">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3589 <mod_aminoacid_mass position="9" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3590 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3591 <search_score name="xcorr" value="0.399"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3592 <search_score name="deltacn" value="0.103"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3593 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3594 <search_score name="spscore" value="2.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3595 <search_score name="sprank" value="9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3596 <search_score name="expect" value="6.38E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3597 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3598 <search_hit hit_rank="2" peptide="NGNVTACSR" peptide_prev_aa="M" peptide_next_aa="G" protein="gi|28849955|ref|NP_788795.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="16" calc_neutral_pep_mass="979.402910" massdiff="-1.009364" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="220">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3599 <modification_info modified_peptide="N[115]GNVTACSR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3600 <mod_aminoacid_mass position="1" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3601 <mod_aminoacid_mass position="7" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3602 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3603 <search_score name="xcorr" value="0.358"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3604 <search_score name="deltacn" value="0.046"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3605 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3606 <search_score name="spscore" value="2.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3607 <search_score name="sprank" value="6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3608 <search_score name="expect" value="1.02E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3609 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3610 <search_hit hit_rank="3" peptide="SCATVNGNR" peptide_prev_aa="M" peptide_next_aa="G" protein="XXX_gi|28849955|ref|NP_788795.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="16" calc_neutral_pep_mass="979.402910" massdiff="-1.009364" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="220">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3611 <modification_info modified_peptide="SCATVNGN[115]R">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3612 <mod_aminoacid_mass position="2" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3613 <mod_aminoacid_mass position="8" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3614 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3615 <search_score name="xcorr" value="0.341"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3616 <search_score name="deltacn" value="0.107"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3617 <search_score name="deltacnstar" value="0.009"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3618 <search_score name="spscore" value="2.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3619 <search_score name="sprank" value="9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3620 <search_score name="expect" value="1.24E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3621 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3622 <search_hit hit_rank="4" peptide="SCATVNGNR" peptide_prev_aa="M" peptide_next_aa="G" protein="XXX_gi|28849955|ref|NP_788795.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="16" calc_neutral_pep_mass="979.402910" massdiff="-1.009364" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="220">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3623 <modification_info modified_peptide="SCATVN[115]GNR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3624 <mod_aminoacid_mass position="2" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3625 <mod_aminoacid_mass position="6" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3626 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3627 <search_score name="xcorr" value="0.338"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3628 <search_score name="deltacn" value="0.099"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3629 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3630 <search_score name="spscore" value="2.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3631 <search_score name="sprank" value="9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3632 <search_score name="expect" value="1.28E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3633 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3634 <search_hit hit_rank="5" peptide="EGTSMDPAR" peptide_prev_aa="P" peptide_next_aa="E" protein="XXX_gi|32880221|ref|NP_872593.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="16" calc_neutral_pep_mass="978.407645" massdiff="-0.014100" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="220">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3635 <modification_info modified_peptide="EGTSM[147]DPAR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3636 <mod_aminoacid_mass position="5" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3637 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3638 <search_score name="xcorr" value="0.305"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3639 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3640 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3641 <search_score name="spscore" value="1.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3642 <search_score name="sprank" value="14"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3643 <search_score name="expect" value="1.88E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3644 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3645 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3646 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3647 <spectrum_query spectrum="201208-378803.00038.00038.3" spectrumNativeID="sample=1 period=1 cycle=1208 experiment=3" start_scan="38" end_scan="38" precursor_neutral_mass="1467.590318" assumed_charge="3" index="76" retention_time_sec="706.8">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3648 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3649 <search_hit hit_rank="1" peptide="SDEETLSERSCR" peptide_prev_aa="S" peptide_next_aa="S" protein="gi|528944676|ref|XP_005204734.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="44" calc_neutral_pep_mass="1468.610002" massdiff="-1.019684" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="174">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3650 <modification_info modified_peptide="SDEETLSERSCR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3651 <mod_aminoacid_mass position="11" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3652 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3653 <search_score name="xcorr" value="0.492"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3654 <search_score name="deltacn" value="0.228"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3655 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3656 <search_score name="spscore" value="3.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3657 <search_score name="sprank" value="4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3658 <search_score name="expect" value="5.11E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3659 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3660 <search_hit hit_rank="2" peptide="SEESSSVHEMTNI" peptide_prev_aa="K" peptide_next_aa="I" protein="XXX_gi|27806963|ref|NP_776953.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="48" calc_neutral_pep_mass="1464.603838" massdiff="2.986480" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="174">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3661 <modification_info modified_peptide="SEESSSVHEM[147]TNI">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3662 <mod_aminoacid_mass position="10" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3663 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3664 <search_score name="xcorr" value="0.380"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3665 <search_score name="deltacn" value="0.023"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3666 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3667 <search_score name="spscore" value="0.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3668 <search_score name="sprank" value="13"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3669 <search_score name="expect" value="1.66E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3670 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3671 <search_hit hit_rank="3" peptide="LSFNPTQLEEQC" peptide_prev_aa="R" peptide_next_aa="H" protein="gi|528969819|ref|XP_005213230.1|" num_tot_proteins="2" num_matched_ions="3" tot_num_ions="44" calc_neutral_pep_mass="1467.607543" massdiff="-0.017225" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="174">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3672 <modification_info modified_peptide="LSFNPTQ[129]LEEQ[129]C">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3673 <mod_aminoacid_mass position="7" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3674 <mod_aminoacid_mass position="11" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3675 <mod_aminoacid_mass position="12" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3676 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3677 <search_score name="xcorr" value="0.371"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3678 <search_score name="deltacn" value="0.035"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3679 <search_score name="deltacnstar" value="0.008"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3680 <search_score name="spscore" value="5.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3681 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3682 <search_score name="expect" value="1.82E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3683 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3684 <search_hit hit_rank="4" peptide="LSFNPTQLEEQC" peptide_prev_aa="R" peptide_next_aa="H" protein="gi|528969819|ref|XP_005213230.1|" num_tot_proteins="2" num_matched_ions="3" tot_num_ions="44" calc_neutral_pep_mass="1467.607543" massdiff="-0.017225" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="174">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3685 <modification_info modified_peptide="LSFN[115]PTQLEEQ[129]C">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3686 <mod_aminoacid_mass position="4" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3687 <mod_aminoacid_mass position="11" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3688 <mod_aminoacid_mass position="12" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3689 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3690 <search_score name="xcorr" value="0.368"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3691 <search_score name="deltacn" value="0.027"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3692 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3693 <search_score name="spscore" value="5.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3694 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3695 <search_score name="expect" value="1.88E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3696 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3697 <search_hit hit_rank="5" peptide="WNEAEQSNPYTK" peptide_prev_aa="I" peptide_next_aa="K" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="44" calc_neutral_pep_mass="1467.615405" massdiff="-0.025087" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="174">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3698 <modification_info modified_peptide="WN[115]EAEQSN[115]PYTK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3699 <mod_aminoacid_mass position="2" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3700 <mod_aminoacid_mass position="8" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3701 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3702 <search_score name="xcorr" value="0.358"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3703 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3704 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3705 <search_score name="spscore" value="2.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3706 <search_score name="sprank" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3707 <search_score name="expect" value="2.08E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3708 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3709 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3710 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3711 <spectrum_query spectrum="201208-378803.00039.00039.3" spectrumNativeID="sample=1 period=1 cycle=1209 experiment=2" start_scan="39" end_scan="39" precursor_neutral_mass="1353.742104" assumed_charge="3" index="77" retention_time_sec="709.5">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3712 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3713 <search_hit hit_rank="1" peptide="QTFAVAVDRFAK" peptide_prev_aa="M" peptide_next_aa="E" protein="XXX_gi|528908812|ref|XP_609847.5|" num_tot_proteins="14" num_matched_ions="5" tot_num_ions="44" calc_neutral_pep_mass="1351.724835" massdiff="2.017269" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="450">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3714 <search_score name="xcorr" value="1.088"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3715 <search_score name="deltacn" value="0.098"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3716 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3717 <search_score name="spscore" value="21.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3718 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3719 <search_score name="expect" value="1.05E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3720 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3721 <search_hit hit_rank="2" peptide="QKAMKPWIQPK" peptide_prev_aa="H" peptide_next_aa="T" protein="gi|27806963|ref|NP_776953.1|" num_tot_proteins="1" num_matched_ions="3" tot_num_ions="40" calc_neutral_pep_mass="1354.743128" massdiff="-1.001024" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="450">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3722 <modification_info modified_peptide="QKAMKPWIQ[129]PK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3723 <mod_aminoacid_mass position="9" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3724 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3725 <search_score name="xcorr" value="0.982"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3726 <search_score name="deltacn" value="0.248"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3727 <search_score name="deltacnstar" value="0.003"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3728 <search_score name="spscore" value="16.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3729 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3730 <search_score name="expect" value="2.08E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3731 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3732 <search_hit hit_rank="3" peptide="QKAMKPWIQPK" peptide_prev_aa="H" peptide_next_aa="T" protein="gi|27806963|ref|NP_776953.1|" num_tot_proteins="1" num_matched_ions="3" tot_num_ions="40" calc_neutral_pep_mass="1353.759112" massdiff="-0.017008" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="450">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3733 <search_score name="xcorr" value="0.978"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3734 <search_score name="deltacn" value="0.245"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3735 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3736 <search_score name="spscore" value="16.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3737 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3738 <search_score name="expect" value="2.12E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3739 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3740 <search_hit hit_rank="4" peptide="ALPDKPGSGAAAAAR" peptide_prev_aa="A" peptide_next_aa="K" protein="XXX_gi|528921178|ref|XP_592304.7|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="56" calc_neutral_pep_mass="1351.720812" massdiff="2.021292" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="450">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3741 <search_score name="xcorr" value="0.739"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3742 <search_score name="deltacn" value="0.012"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3743 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3744 <search_score name="spscore" value="11.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3745 <search_score name="sprank" value="4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3746 <search_score name="expect" value="9.85E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3747 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3748 <search_hit hit_rank="5" peptide="VPYSELVKKCK" peptide_prev_aa="I" peptide_next_aa="I" protein="gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="4" tot_num_ions="40" calc_neutral_pep_mass="1350.721724" massdiff="3.020380" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="450">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3749 <modification_info modified_peptide="VPYSELVKKCK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3750 <mod_aminoacid_mass position="10" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3751 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3752 <search_score name="xcorr" value="0.730"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3753 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3754 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3755 <search_score name="spscore" value="10.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3756 <search_score name="sprank" value="8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3757 <search_score name="expect" value="1.04E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3758 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3759 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3760 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3761 <spectrum_query spectrum="201208-378803.00039.00039.2" spectrumNativeID="sample=1 period=1 cycle=1209 experiment=2" start_scan="39" end_scan="39" precursor_neutral_mass="902.494736" assumed_charge="2" index="78" retention_time_sec="709.5">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3762 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3763 <search_hit hit_rank="1" peptide="DRQSRLK" peptide_prev_aa="A" peptide_next_aa="D" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="12" calc_neutral_pep_mass="902.493379" massdiff="0.001357" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="702">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3764 <modification_info modified_peptide="DRQ[129]SRLK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3765 <mod_aminoacid_mass position="3" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3766 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3767 <search_score name="xcorr" value="0.534"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3768 <search_score name="deltacn" value="0.006"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3769 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3770 <search_score name="spscore" value="16.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3771 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3772 <search_score name="expect" value="2.02E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3773 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3774 <search_hit hit_rank="2" peptide="KNLTNWK" peptide_prev_aa="R" peptide_next_aa="V" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="12" calc_neutral_pep_mass="902.497401" massdiff="-0.002665" num_tol_term="2" num_missed_cleavages="1" num_matched_peptides="702">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3775 <search_score name="xcorr" value="0.531"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3776 <search_score name="deltacn" value="0.003"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3777 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3778 <search_score name="spscore" value="1.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3779 <search_score name="sprank" value="12"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3780 <search_score name="expect" value="2.07E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3781 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3782 <search_hit hit_rank="3" peptide="SELWQLK" peptide_prev_aa="V" peptide_next_aa="E" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="12" calc_neutral_pep_mass="902.486168" massdiff="0.008568" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="702">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3783 <search_score name="xcorr" value="0.529"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3784 <search_score name="deltacn" value="0.035"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3785 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3786 <search_score name="spscore" value="6.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3787 <search_score name="sprank" value="7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3788 <search_score name="expect" value="2.10E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3789 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3790 <search_hit hit_rank="4" peptide="KENASRAK" peptide_prev_aa="P" peptide_next_aa="E" protein="gi|528961840|ref|XP_005211303.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="14" calc_neutral_pep_mass="902.493379" massdiff="0.001358" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="702">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3791 <search_score name="xcorr" value="0.511"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3792 <search_score name="deltacn" value="0.032"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3793 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3794 <search_score name="spscore" value="1.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3795 <search_score name="sprank" value="13"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3796 <search_score name="expect" value="2.43E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3797 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3798 <search_hit hit_rank="5" peptide="QVELASQK" peptide_prev_aa="L" peptide_next_aa="T" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="0" tot_num_ions="14" calc_neutral_pep_mass="901.486896" massdiff="1.007840" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="702">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3799 <search_score name="xcorr" value="0.494"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3800 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3801 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3802 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3803 <search_score name="sprank" value="17"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3804 <search_score name="expect" value="2.76E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3805 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3806 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3807 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3808 <spectrum_query spectrum="201208-378803.00040.00040.3" spectrumNativeID="sample=1 period=1 cycle=1209 experiment=3" start_scan="40" end_scan="40" precursor_neutral_mass="1709.086685" assumed_charge="3" index="79" retention_time_sec="711.6">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3809 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3810 <search_hit hit_rank="1" peptide="TGLLLLGARELILVTK" peptide_prev_aa="M" peptide_next_aa="I" protein="gi|528920173|ref|XP_001788336.2|" num_tot_proteins="2" num_matched_ions="1" tot_num_ions="60" calc_neutral_pep_mass="1709.081492" massdiff="0.005193" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="12">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3811 <search_score name="xcorr" value="0.245"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3812 <search_score name="deltacn" value="0.014"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3813 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3814 <search_score name="spscore" value="0.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3815 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3816 <search_score name="expect" value="3.44E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3817 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3818 <search_hit hit_rank="2" peptide="TVLILERAGLLLLGTK" peptide_prev_aa="M" peptide_next_aa="I" protein="XXX_gi|528920173|ref|XP_001788336.2|" num_tot_proteins="2" num_matched_ions="1" tot_num_ions="60" calc_neutral_pep_mass="1709.081492" massdiff="0.005193" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="12">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3819 <search_score name="xcorr" value="0.242"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3820 <search_score name="deltacn" value="0.072"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3821 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3822 <search_score name="spscore" value="0.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3823 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3824 <search_score name="expect" value="3.58E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3825 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3826 <search_hit hit_rank="3" peptide="SRAANLIVLSLPVARK" peptide_prev_aa="H" peptide_next_aa="G" protein="gi|358414198|ref|XP_002700672.2|" num_tot_proteins="4" num_matched_ions="0" tot_num_ions="60" calc_neutral_pep_mass="1707.051923" massdiff="2.034762" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="12">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3827 <search_score name="xcorr" value="0.224"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3828 <search_score name="deltacn" value="0.473"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3829 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3830 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3831 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3832 <search_score name="expect" value="4.45E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3833 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3834 <search_hit hit_rank="4" peptide="RAVPLSLVILNAARSK" peptide_prev_aa="H" peptide_next_aa="G" protein="XXX_gi|358414198|ref|XP_002700672.2|" num_tot_proteins="4" num_matched_ions="1" tot_num_ions="60" calc_neutral_pep_mass="1707.051923" massdiff="2.034762" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="12">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3835 <search_score name="xcorr" value="0.118"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3836 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3837 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3838 <search_score name="spscore" value="0.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3839 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3840 <search_score name="expect" value="1.67E+002"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3841 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3842 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3843 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3844 <spectrum_query spectrum="201208-378803.00040.00040.2" spectrumNativeID="sample=1 period=1 cycle=1209 experiment=3" start_scan="40" end_scan="40" precursor_neutral_mass="1139.391123" assumed_charge="2" index="80" retention_time_sec="711.6">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3845 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3846 <search_hit hit_rank="1" peptide="DMMSHGESQT" peptide_prev_aa="R" peptide_next_aa="L" protein="XXX_gi|358418103|ref|XP_600387.4|" num_tot_proteins="4" num_matched_ions="0" tot_num_ions="18" calc_neutral_pep_mass="1137.406659" massdiff="1.984465" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="32">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3847 <modification_info modified_peptide="DM[147]MSHGESQT">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3848 <mod_aminoacid_mass position="2" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3849 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3850 <search_score name="xcorr" value="0.117"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3851 <search_score name="deltacn" value="0.714"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3852 <search_score name="deltacnstar" value="0.018"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3853 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3854 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3855 <search_score name="expect" value="1.09E+002"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3856 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3857 <search_hit hit_rank="2" peptide="DMMSHGESQT" peptide_prev_aa="R" peptide_next_aa="L" protein="XXX_gi|358418103|ref|XP_600387.4|" num_tot_proteins="4" num_matched_ions="0" tot_num_ions="18" calc_neutral_pep_mass="1137.406659" massdiff="1.984465" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="32">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3858 <modification_info modified_peptide="DMM[147]SHGESQT">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3859 <mod_aminoacid_mass position="3" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3860 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3861 <search_score name="xcorr" value="0.115"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3862 <search_score name="deltacn" value="0.708"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3863 <search_score name="deltacnstar" value="0.409"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3864 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3865 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3866 <search_score name="expect" value="1.13E+002"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3867 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3868 <search_hit hit_rank="3" peptide="DMMSHGESQT" peptide_prev_aa="R" peptide_next_aa="L" protein="XXX_gi|358418103|ref|XP_600387.4|" num_tot_proteins="4" num_matched_ions="0" tot_num_ions="18" calc_neutral_pep_mass="1138.390675" massdiff="1.000449" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="32">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3869 <modification_info modified_peptide="DM[147]MSHGESQ[129]T">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3870 <mod_aminoacid_mass position="2" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3871 <mod_aminoacid_mass position="9" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3872 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3873 <search_score name="xcorr" value="0.068"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3874 <search_score name="deltacn" value="0.507"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3875 <search_score name="deltacnstar" value="0.031"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3876 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3877 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3878 <search_score name="expect" value="2.45E+002"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3879 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3880 <search_hit hit_rank="4" peptide="DMMSHGESQT" peptide_prev_aa="R" peptide_next_aa="L" protein="XXX_gi|358418103|ref|XP_600387.4|" num_tot_proteins="4" num_matched_ions="0" tot_num_ions="18" calc_neutral_pep_mass="1138.390675" massdiff="1.000449" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="32">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3881 <modification_info modified_peptide="DMM[147]SHGESQ[129]T">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3882 <mod_aminoacid_mass position="3" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3883 <mod_aminoacid_mass position="9" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3884 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3885 <search_score name="xcorr" value="0.066"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3886 <search_score name="deltacn" value="0.491"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3887 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3888 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3889 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3890 <search_score name="expect" value="2.54E+002"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3891 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3892 <search_hit hit_rank="5" peptide="QSEGHSMMDT" peptide_prev_aa="R" peptide_next_aa="L" protein="gi|358418103|ref|XP_600387.4|" num_tot_proteins="4" num_matched_ions="0" tot_num_ions="18" calc_neutral_pep_mass="1137.406659" massdiff="1.984465" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="32">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3893 <modification_info modified_peptide="QSEGHSMM[147]DT">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3894 <mod_aminoacid_mass position="8" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3895 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3896 <search_score name="xcorr" value="0.034"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3897 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3898 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3899 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3900 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3901 <search_score name="expect" value="4.34E+002"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3902 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3903 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3904 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3905 <spectrum_query spectrum="201208-378803.00041.00041.3" spectrumNativeID="sample=1 period=1 cycle=1209 experiment=4" start_scan="41" end_scan="41" precursor_neutral_mass="1440.575201" assumed_charge="3" index="81" retention_time_sec="713.7">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3906 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3907 <search_hit hit_rank="1" peptide="TMEEMFTQHER" peptide_prev_aa="A" peptide_next_aa="K" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="40" calc_neutral_pep_mass="1438.585701" massdiff="1.989500" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="334">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3908 <modification_info modified_peptide="TMEEMFTQ[129]HER">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3909 <mod_aminoacid_mass position="8" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3910 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3911 <search_score name="xcorr" value="0.447"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3912 <search_score name="deltacn" value="0.091"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3913 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3914 <search_score name="spscore" value="3.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3915 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3916 <search_score name="expect" value="6.84E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3917 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3918 <search_hit hit_rank="2" peptide="DSFFQFYATNEA" peptide_prev_aa="K" peptide_next_aa="R" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="44" calc_neutral_pep_mass="1439.588127" massdiff="0.987074" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="334">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3919 <modification_info modified_peptide="DSFFQFYATN[115]EA">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3920 <mod_aminoacid_mass position="10" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3921 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3922 <search_score name="xcorr" value="0.407"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3923 <search_score name="deltacn" value="0.014"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3924 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3925 <search_score name="spscore" value="0.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3926 <search_score name="sprank" value="17"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3927 <search_score name="expect" value="1.07E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3928 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3929 <search_hit hit_rank="3" peptide="TFNLHNSSSFGQT" peptide_prev_aa="K" peptide_next_aa="H" protein="gi|28849955|ref|NP_788795.1|" num_tot_proteins="1" num_matched_ions="3" tot_num_ions="48" calc_neutral_pep_mass="1441.599755" massdiff="-1.024554" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="334">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3930 <modification_info modified_peptide="TFN[115]LHN[115]SSSFGQ[129]T">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3931 <mod_aminoacid_mass position="3" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3932 <mod_aminoacid_mass position="6" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3933 <mod_aminoacid_mass position="12" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3934 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3935 <search_score name="xcorr" value="0.401"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3936 <search_score name="deltacn" value="0.018"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3937 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3938 <search_score name="spscore" value="5.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3939 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3940 <search_score name="expect" value="1.14E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3941 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3942 <search_hit hit_rank="4" peptide="AMSSSDEETLSER" peptide_prev_aa="W" peptide_next_aa="S" protein="gi|528944676|ref|XP_005204734.1|" num_tot_proteins="2" num_matched_ions="2" tot_num_ions="48" calc_neutral_pep_mass="1440.603853" massdiff="-0.028652" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="334">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3943 <search_score name="xcorr" value="0.394"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3944 <search_score name="deltacn" value="0.119"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3945 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3946 <search_score name="spscore" value="3.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3947 <search_score name="sprank" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3948 <search_score name="expect" value="1.24E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3949 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3950 <search_hit hit_rank="5" peptide="ERPFVCQQCGR" peptide_prev_aa="G" peptide_next_aa="G" protein="gi|528908812|ref|XP_609847.5|" num_tot_proteins="12" num_matched_ions="2" tot_num_ions="40" calc_neutral_pep_mass="1439.580952" massdiff="0.994250" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="334">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3951 <modification_info modified_peptide="ERPFVCQ[129]Q[129]CGR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3952 <mod_aminoacid_mass position="6" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3953 <mod_aminoacid_mass position="7" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3954 <mod_aminoacid_mass position="8" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3955 <mod_aminoacid_mass position="9" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3956 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3957 <search_score name="xcorr" value="0.347"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3958 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3959 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3960 <search_score name="spscore" value="3.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3961 <search_score name="sprank" value="6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3962 <search_score name="expect" value="2.09E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3963 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3964 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3965 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3966 <spectrum_query spectrum="201208-378803.00041.00041.2" spectrumNativeID="sample=1 period=1 cycle=1209 experiment=4" start_scan="41" end_scan="41" precursor_neutral_mass="960.383467" assumed_charge="2" index="82" retention_time_sec="713.7">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3967 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3968 <search_hit hit_rank="1" peptide="TMEEMFR" peptide_prev_aa="T" peptide_next_aa="K" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="12" calc_neutral_pep_mass="958.388824" massdiff="1.994644" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="136">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3969 <modification_info modified_peptide="TM[147]EEMFR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3970 <mod_aminoacid_mass position="2" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3971 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3972 <search_score name="xcorr" value="0.413"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3973 <search_score name="deltacn" value="0.128"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3974 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3975 <search_score name="spscore" value="22.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3976 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3977 <search_score name="expect" value="5.20E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3978 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3979 <search_hit hit_rank="2" peptide="YWQISMN" peptide_prev_aa="R" peptide_next_aa="R" protein="gi|28849955|ref|NP_788795.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="12" calc_neutral_pep_mass="957.390204" massdiff="2.993263" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="136">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3980 <modification_info modified_peptide="YWQISM[147]N[115]">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3981 <mod_aminoacid_mass position="6" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3982 <mod_aminoacid_mass position="7" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3983 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3984 <search_score name="xcorr" value="0.360"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3985 <search_score name="deltacn" value="0.099"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3986 <search_score name="deltacnstar" value="0.002"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3987 <search_score name="spscore" value="2.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3988 <search_score name="sprank" value="10"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3989 <search_score name="expect" value="9.67E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3990 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3991 <search_hit hit_rank="3" peptide="YWQISMN" peptide_prev_aa="R" peptide_next_aa="R" protein="gi|28849955|ref|NP_788795.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="12" calc_neutral_pep_mass="958.374220" massdiff="2.009247" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="136">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3992 <modification_info modified_peptide="YWQ[129]ISM[147]N[115]">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3993 <mod_aminoacid_mass position="3" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3994 <mod_aminoacid_mass position="6" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3995 <mod_aminoacid_mass position="7" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3996 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3997 <search_score name="xcorr" value="0.360"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3998 <search_score name="deltacn" value="0.097"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
3999 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4000 <search_score name="spscore" value="2.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4001 <search_score name="sprank" value="10"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4002 <search_score name="expect" value="9.74E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4003 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4004 <search_hit hit_rank="4" peptide="TMEEMFR" peptide_prev_aa="T" peptide_next_aa="K" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="12" calc_neutral_pep_mass="958.388824" massdiff="1.994644" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="136">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4005 <modification_info modified_peptide="TMEEM[147]FR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4006 <mod_aminoacid_mass position="5" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4007 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4008 <search_score name="xcorr" value="0.325"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4009 <search_score name="deltacn" value="0.061"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4010 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4011 <search_score name="spscore" value="12.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4012 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4013 <search_score name="expect" value="1.47E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4014 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4015 <search_hit hit_rank="5" peptide="PQSGGGEASGGG" peptide_prev_aa="R" peptide_next_aa="E" protein="gi|528961840|ref|XP_005211303.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="22" calc_neutral_pep_mass="959.394452" massdiff="0.989015" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="136">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4016 <search_score name="xcorr" value="0.305"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4017 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4018 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4019 <search_score name="spscore" value="1.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4020 <search_score name="sprank" value="13"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4021 <search_score name="expect" value="1.86E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4022 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4023 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4024 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4025 <spectrum_query spectrum="201208-378803.00042.00042.3" spectrumNativeID="sample=1 period=1 cycle=1209 experiment=5" start_scan="42" end_scan="42" precursor_neutral_mass="1209.554789" assumed_charge="3" index="83" retention_time_sec="715.8">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4026 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4027 <search_hit hit_rank="1" peptide="SSLEATRDMVT" peptide_prev_aa="K" peptide_next_aa="Q" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="4" tot_num_ions="40" calc_neutral_pep_mass="1208.570702" massdiff="0.984087" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="964">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4028 <search_score name="xcorr" value="0.794"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4029 <search_score name="deltacn" value="0.169"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4030 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4031 <search_score name="spscore" value="8.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4032 <search_score name="sprank" value="6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4033 <search_score name="expect" value="5.49E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4034 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4035 <search_hit hit_rank="2" peptide="MSAICTNGVVR" peptide_prev_aa="S" peptide_next_aa="G" protein="gi|358414198|ref|XP_002700672.2|" num_tot_proteins="3" num_matched_ions="4" tot_num_ions="40" calc_neutral_pep_mass="1208.552945" massdiff="1.001845" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="964">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4036 <modification_info modified_peptide="MSAICTN[115]GVVR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4037 <mod_aminoacid_mass position="5" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4038 <mod_aminoacid_mass position="7" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4039 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4040 <search_score name="xcorr" value="0.660"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4041 <search_score name="deltacn" value="0.005"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4042 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4043 <search_score name="spscore" value="9.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4044 <search_score name="sprank" value="4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4045 <search_score name="expect" value="1.51E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4046 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4047 <search_hit hit_rank="3" peptide="EVASTTMEKNT" peptide_prev_aa="K" peptide_next_aa="N" protein="gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="3" tot_num_ions="40" calc_neutral_pep_mass="1210.538734" massdiff="-0.983945" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="964">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4048 <modification_info modified_peptide="EVASTTMEKN[115]T">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4049 <mod_aminoacid_mass position="10" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4050 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4051 <search_score name="xcorr" value="0.657"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4052 <search_score name="deltacn" value="0.020"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4053 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4054 <search_score name="spscore" value="5.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4055 <search_score name="sprank" value="15"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4056 <search_score name="expect" value="1.55E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4057 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4058 <search_hit hit_rank="4" peptide="AEAMKVREME" peptide_prev_aa="-" peptide_next_aa="S" protein="XXX_gi|528968104|ref|XP_005212567.1|" num_tot_proteins="4" num_matched_ions="2" tot_num_ions="36" calc_neutral_pep_mass="1208.552929" massdiff="1.001860" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="964">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4059 <modification_info modified_peptide="AEAMKVREM[147]E">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4060 <mod_aminoacid_mass position="9" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4061 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4062 <search_score name="xcorr" value="0.644"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4063 <search_score name="deltacn" value="0.042"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4064 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4065 <search_score name="spscore" value="3.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4066 <search_score name="sprank" value="23"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4067 <search_score name="expect" value="1.71E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4068 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4069 <search_hit hit_rank="5" peptide="PEGSVVMFGGVD" peptide_prev_aa="K" peptide_next_aa="H" protein="gi|119924469|ref|XP_001252524.1|" num_tot_proteins="2" num_matched_ions="3" tot_num_ions="44" calc_neutral_pep_mass="1208.538325" massdiff="1.016464" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="964">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4070 <modification_info modified_peptide="PEGSVVM[147]FGGVD">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4071 <mod_aminoacid_mass position="7" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4072 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4073 <search_score name="xcorr" value="0.616"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4074 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4075 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4076 <search_score name="spscore" value="4.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4077 <search_score name="sprank" value="22"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4078 <search_score name="expect" value="2.10E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4079 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4080 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4081 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4082 <spectrum_query spectrum="201208-378803.00042.00042.2" spectrumNativeID="sample=1 period=1 cycle=1209 experiment=5" start_scan="42" end_scan="42" precursor_neutral_mass="806.369860" assumed_charge="2" index="84" retention_time_sec="715.8">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4083 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4084 <search_hit hit_rank="1" peptide="QQFQPR" peptide_prev_aa="I" peptide_next_aa="Q" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="10" calc_neutral_pep_mass="805.360634" massdiff="1.009225" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="438">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4085 <modification_info modified_peptide="Q[129]Q[129]FQ[129]PR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4086 <mod_aminoacid_mass position="1" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4087 <mod_aminoacid_mass position="2" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4088 <mod_aminoacid_mass position="4" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4089 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4090 <search_score name="xcorr" value="0.503"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4091 <search_score name="deltacn" value="0.015"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4092 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4093 <search_score name="spscore" value="26.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4094 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4095 <search_score name="expect" value="1.09E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4096 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4097 <search_hit hit_rank="2" peptide="DKDQDGK" peptide_prev_aa="I" peptide_next_aa="I" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="12" calc_neutral_pep_mass="804.361361" massdiff="2.008498" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="438">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4098 <search_score name="xcorr" value="0.495"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4099 <search_score name="deltacn" value="0.065"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4100 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4101 <search_score name="spscore" value="12.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4102 <search_score name="sprank" value="6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4103 <search_score name="expect" value="1.17E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4104 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4105 <search_hit hit_rank="3" peptide="QQFQPR" peptide_prev_aa="I" peptide_next_aa="Q" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="10" calc_neutral_pep_mass="804.376618" massdiff="1.993241" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="438">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4106 <modification_info modified_peptide="Q[129]Q[129]FQPR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4107 <mod_aminoacid_mass position="1" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4108 <mod_aminoacid_mass position="2" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4109 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4110 <search_score name="xcorr" value="0.463"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4111 <search_score name="deltacn" value="0.096"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4112 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4113 <search_score name="spscore" value="26.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4114 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4115 <search_score name="expect" value="1.56E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4116 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4117 <search_hit hit_rank="4" peptide="ENPSLVM" peptide_prev_aa="R" peptide_next_aa="P" protein="gi|528921178|ref|XP_592304.7|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="12" calc_neutral_pep_mass="804.368740" massdiff="2.001119" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="438">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4118 <modification_info modified_peptide="ENPSLVM[147]">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4119 <mod_aminoacid_mass position="7" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4120 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4121 <search_score name="xcorr" value="0.418"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4122 <search_score name="deltacn" value="0.013"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4123 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4124 <search_score name="spscore" value="7.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4125 <search_score name="sprank" value="16"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4126 <search_score name="expect" value="2.33E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4127 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4128 <search_hit hit_rank="5" peptide="QSQQAKN" peptide_prev_aa="K" peptide_next_aa="R" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="12" calc_neutral_pep_mass="804.361362" massdiff="2.008497" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="438">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4129 <modification_info modified_peptide="Q[129]SQQAKN[115]">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4130 <mod_aminoacid_mass position="1" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4131 <mod_aminoacid_mass position="7" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4132 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4133 <search_score name="xcorr" value="0.413"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4134 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4135 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4136 <search_score name="spscore" value="6.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4137 <search_score name="sprank" value="20"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4138 <search_score name="expect" value="2.45E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4139 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4140 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4141 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4142 <spectrum_query spectrum="201208-378803.00043.00043.3" spectrumNativeID="sample=1 period=1 cycle=1210 experiment=2" start_scan="43" end_scan="43" precursor_neutral_mass="1788.845318" assumed_charge="3" index="85" retention_time_sec="718.5">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4143 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4144 <search_hit hit_rank="1" peptide="EQKWHVVSSKMEER" peptide_prev_aa="L" peptide_next_aa="K" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="4" tot_num_ions="52" calc_neutral_pep_mass="1787.862453" massdiff="0.982865" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="976">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4145 <modification_info modified_peptide="EQKWHVVSSKM[147]EER">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4146 <mod_aminoacid_mass position="11" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4147 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4148 <search_score name="xcorr" value="0.875"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4149 <search_score name="deltacn" value="0.414"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4150 <search_score name="deltacnstar" value="0.068"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4151 <search_score name="spscore" value="4.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4152 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4153 <search_score name="expect" value="1.95E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4154 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4155 <search_hit hit_rank="2" peptide="EQKWHVVSSKMEER" peptide_prev_aa="L" peptide_next_aa="K" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="52" calc_neutral_pep_mass="1788.846469" massdiff="-0.001151" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="976">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4156 <modification_info modified_peptide="EQ[129]KWHVVSSKM[147]EER">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4157 <mod_aminoacid_mass position="2" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4158 <mod_aminoacid_mass position="11" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4159 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4160 <search_score name="xcorr" value="0.815"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4161 <search_score name="deltacn" value="0.371"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4162 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4163 <search_score name="spscore" value="2.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4164 <search_score name="sprank" value="4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4165 <search_score name="expect" value="3.06E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4166 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4167 <search_hit hit_rank="3" peptide="YQKALNEINQFYQK" peptide_prev_aa="H" peptide_next_aa="F" protein="gi|27806963|ref|NP_776953.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="52" calc_neutral_pep_mass="1788.857032" massdiff="-0.011714" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="976">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4168 <modification_info modified_peptide="YQ[129]KALNEIN[115]Q[129]FYQK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4169 <mod_aminoacid_mass position="2" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4170 <mod_aminoacid_mass position="9" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4171 <mod_aminoacid_mass position="10" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4172 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4173 <search_score name="xcorr" value="0.513"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4174 <search_score name="deltacn" value="0.010"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4175 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4176 <search_score name="spscore" value="1.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4177 <search_score name="sprank" value="18"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4178 <search_score name="expect" value="2.98E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4179 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4180 <search_hit hit_rank="4" peptide="YNDSDLINRFIGSWS" peptide_prev_aa="K" peptide_next_aa="P" protein="XXX_gi|528968108|ref|XP_005212569.1|" num_tot_proteins="4" num_matched_ions="3" tot_num_ions="56" calc_neutral_pep_mass="1785.832213" massdiff="3.013105" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="976">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4181 <search_score name="xcorr" value="0.508"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4182 <search_score name="deltacn" value="0.015"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4183 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4184 <search_score name="spscore" value="2.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4185 <search_score name="sprank" value="6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4186 <search_score name="expect" value="3.10E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4187 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4188 <search_hit hit_rank="5" peptide="QYFQNIENLAKQYK" peptide_prev_aa="H" peptide_next_aa="F" protein="XXX_gi|27806963|ref|NP_776953.1|" num_tot_proteins="1" num_matched_ions="3" tot_num_ions="52" calc_neutral_pep_mass="1788.857032" massdiff="-0.011714" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="976">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4189 <modification_info modified_peptide="QYFQ[129]N[115]IEN[115]LAKQYK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4190 <mod_aminoacid_mass position="4" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4191 <mod_aminoacid_mass position="5" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4192 <mod_aminoacid_mass position="8" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4193 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4194 <search_score name="xcorr" value="0.500"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4195 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4196 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4197 <search_score name="spscore" value="2.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4198 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4199 <search_score name="expect" value="3.27E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4200 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4201 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4202 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4203 <spectrum_query spectrum="201208-378803.00043.00043.2" spectrumNativeID="sample=1 period=1 cycle=1210 experiment=2" start_scan="43" end_scan="43" precursor_neutral_mass="1192.563545" assumed_charge="2" index="86" retention_time_sec="718.5">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4204 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4205 <search_hit hit_rank="1" peptide="PNTEPTHHFI" peptide_prev_aa="R" peptide_next_aa="H" protein="gi|528928354|ref|XP_005193233.1|" num_tot_proteins="1" num_matched_ions="3" tot_num_ions="18" calc_neutral_pep_mass="1191.567272" massdiff="0.996274" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="978">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4206 <search_score name="xcorr" value="0.457"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4207 <search_score name="deltacn" value="0.187"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4208 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4209 <search_score name="spscore" value="6.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4210 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4211 <search_score name="expect" value="3.01E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4212 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4213 <search_hit hit_rank="2" peptide="IVSWGSGCAQK" peptide_prev_aa="G" peptide_next_aa="N" protein="gi|528903801|ref|XP_871686.4|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="20" calc_neutral_pep_mass="1192.554659" massdiff="0.008887" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="978">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4214 <modification_info modified_peptide="IVSWGSGCAQK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4215 <mod_aminoacid_mass position="8" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4216 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4217 <search_score name="xcorr" value="0.372"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4218 <search_score name="deltacn" value="0.014"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4219 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4220 <search_score name="spscore" value="3.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4221 <search_score name="sprank" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4222 <search_score name="expect" value="9.72E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4223 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4224 <search_hit hit_rank="3" peptide="AQEMQQLRDA" peptide_prev_aa="R" peptide_next_aa="Q" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="18" calc_neutral_pep_mass="1189.539737" massdiff="3.023809" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="978">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4225 <modification_info modified_peptide="AQ[129]EMQQLRDA">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4226 <mod_aminoacid_mass position="2" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4227 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4228 <search_score name="xcorr" value="0.366"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4229 <search_score name="deltacn" value="0.110"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4230 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4231 <search_score name="spscore" value="2.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4232 <search_score name="sprank" value="7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4233 <search_score name="expect" value="1.04E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4234 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4235 <search_hit hit_rank="4" peptide="LANGQATTEER" peptide_prev_aa="V" peptide_next_aa="D" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="20" calc_neutral_pep_mass="1190.541511" massdiff="2.022034" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="978">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4236 <modification_info modified_peptide="LAN[115]GQ[129]ATTEER">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4237 <mod_aminoacid_mass position="3" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4238 <mod_aminoacid_mass position="5" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4239 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4240 <search_score name="xcorr" value="0.326"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4241 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4242 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4243 <search_score name="spscore" value="5.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4244 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4245 <search_score name="expect" value="1.81E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4246 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4247 <search_hit hit_rank="5" peptide="LANGQATTEER" peptide_prev_aa="V" peptide_next_aa="D" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="20" calc_neutral_pep_mass="1189.557495" massdiff="3.006050" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="978">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4248 <modification_info modified_peptide="LAN[115]GQATTEER">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4249 <mod_aminoacid_mass position="3" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4250 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4251 <search_score name="xcorr" value="0.326"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4252 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4253 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4254 <search_score name="spscore" value="5.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4255 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4256 <search_score name="expect" value="1.83E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4257 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4258 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4259 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4260 <spectrum_query spectrum="201208-378803.00044.00044.2" spectrumNativeID="sample=1 period=1 cycle=1210 experiment=3" start_scan="44" end_scan="44" precursor_neutral_mass="921.417898" assumed_charge="2" index="87" retention_time_sec="720.6">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4261 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4262 <search_hit hit_rank="1" peptide="AGMEWEAK" peptide_prev_aa="V" peptide_next_aa="A" protein="gi|358414198|ref|XP_002700672.2|" num_tot_proteins="4" num_matched_ions="1" tot_num_ions="14" calc_neutral_pep_mass="920.406203" massdiff="1.011695" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="560">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4263 <search_score name="xcorr" value="0.514"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4264 <search_score name="deltacn" value="0.031"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4265 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4266 <search_score name="spscore" value="2.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4267 <search_score name="sprank" value="15"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4268 <search_score name="expect" value="9.22E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4269 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4270 <search_hit hit_rank="2" peptide="TSEENSKK" peptide_prev_aa="S" peptide_next_aa="T" protein="gi|27806963|ref|NP_776953.1|" num_tot_proteins="1" num_matched_ions="3" tot_num_ions="14" calc_neutral_pep_mass="922.424356" massdiff="-1.006458" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="560">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4271 <modification_info modified_peptide="TSEEN[115]SKK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4272 <mod_aminoacid_mass position="5" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4273 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4274 <search_score name="xcorr" value="0.498"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4275 <search_score name="deltacn" value="0.035"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4276 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4277 <search_score name="spscore" value="18.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4278 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4279 <search_score name="expect" value="1.08E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4280 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4281 <search_hit hit_rank="3" peptide="ISMNGNVTA" peptide_prev_aa="R" peptide_next_aa="C" protein="gi|28849955|ref|NP_788795.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="16" calc_neutral_pep_mass="921.422567" massdiff="-0.004668" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="560">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4282 <modification_info modified_peptide="ISM[147]NGNVTA">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4283 <mod_aminoacid_mass position="3" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4284 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4285 <search_score name="xcorr" value="0.481"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4286 <search_score name="deltacn" value="0.015"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4287 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4288 <search_score name="spscore" value="2.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4289 <search_score name="sprank" value="13"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4290 <search_score name="expect" value="1.27E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4291 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4292 <search_hit hit_rank="4" peptide="KSNEESTK" peptide_prev_aa="S" peptide_next_aa="T" protein="XXX_gi|27806963|ref|NP_776953.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="14" calc_neutral_pep_mass="922.424356" massdiff="-1.006458" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="560">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4293 <modification_info modified_peptide="KSN[115]EESTK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4294 <mod_aminoacid_mass position="3" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4295 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4296 <search_score name="xcorr" value="0.474"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4297 <search_score name="deltacn" value="0.155"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4298 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4299 <search_score name="spscore" value="2.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4300 <search_score name="sprank" value="15"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4301 <search_score name="expect" value="1.37E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4302 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4303 <search_hit hit_rank="5" peptide="KCVTDWL" peptide_prev_aa="R" peptide_next_aa="S" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="12" calc_neutral_pep_mass="921.426605" massdiff="-0.008706" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="560">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4304 <modification_info modified_peptide="KCVTDWL">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4305 <mod_aminoacid_mass position="2" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4306 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4307 <search_score name="xcorr" value="0.400"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4308 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4309 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4310 <search_score name="spscore" value="5.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4311 <search_score name="sprank" value="10"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4312 <search_score name="expect" value="2.77E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4313 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4314 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4315 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4316 <spectrum_query spectrum="201208-378803.00044.00044.3" spectrumNativeID="sample=1 period=1 cycle=1210 experiment=3" start_scan="44" end_scan="44" precursor_neutral_mass="1382.126847" assumed_charge="3" index="88" retention_time_sec="720.6">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4317 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4318 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4319 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4320 <spectrum_query spectrum="201208-378803.00045.00045.3" spectrumNativeID="sample=1 period=1 cycle=1210 experiment=4" start_scan="45" end_scan="45" precursor_neutral_mass="1640.306310" assumed_charge="3" index="89" retention_time_sec="722.7">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4321 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4322 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4323 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4324 <spectrum_query spectrum="201208-378803.00045.00045.2" spectrumNativeID="sample=1 period=1 cycle=1210 experiment=4" start_scan="45" end_scan="45" precursor_neutral_mass="1093.537540" assumed_charge="2" index="90" retention_time_sec="722.7">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4325 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4326 <search_hit hit_rank="1" peptide="MVTSELRNK" peptide_prev_aa="K" peptide_next_aa="L" protein="gi|528993971|ref|XP_005219929.1|" num_tot_proteins="4" num_matched_ions="2" tot_num_ions="16" calc_neutral_pep_mass="1093.543745" massdiff="-0.006205" num_tol_term="2" num_missed_cleavages="1" num_matched_peptides="888">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4327 <modification_info modified_peptide="M[147]VTSELRN[115]K">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4328 <mod_aminoacid_mass position="1" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4329 <mod_aminoacid_mass position="8" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4330 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4331 <search_score name="xcorr" value="0.514"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4332 <search_score name="deltacn" value="0.004"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4333 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4334 <search_score name="spscore" value="9.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4335 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4336 <search_score name="expect" value="1.01E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4337 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4338 <search_hit hit_rank="2" peptide="AMKQAQQQR" peptide_prev_aa="T" peptide_next_aa="N" protein="gi|528968108|ref|XP_005212569.1|" num_tot_proteins="4" num_matched_ions="1" tot_num_ions="16" calc_neutral_pep_mass="1090.507709" massdiff="3.029830" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="888">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4339 <modification_info modified_peptide="AMKQ[129]AQ[129]Q[129]QR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4340 <mod_aminoacid_mass position="4" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4341 <mod_aminoacid_mass position="6" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4342 <mod_aminoacid_mass position="7" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4343 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4344 <search_score name="xcorr" value="0.512"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4345 <search_score name="deltacn" value="0.084"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4346 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4347 <search_score name="spscore" value="1.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4348 <search_score name="sprank" value="12"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4349 <search_score name="expect" value="1.04E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4350 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4351 <search_hit hit_rank="3" peptide="EQSVVTSLDL" peptide_prev_aa="K" peptide_next_aa="E" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="18" calc_neutral_pep_mass="1090.539386" massdiff="2.998154" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="888">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4352 <modification_info modified_peptide="EQ[129]SVVTSLDL">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4353 <mod_aminoacid_mass position="2" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4354 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4355 <search_score name="xcorr" value="0.469"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4356 <search_score name="deltacn" value="0.184"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4357 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4358 <search_score name="spscore" value="12.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4359 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4360 <search_score name="expect" value="1.58E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4361 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4362 <search_hit hit_rank="4" peptide="VNQLSNSLTI" peptide_prev_aa="R" peptide_next_aa="K" protein="XXX_gi|528968108|ref|XP_005212569.1|" num_tot_proteins="4" num_matched_ions="1" tot_num_ions="18" calc_neutral_pep_mass="1090.539387" massdiff="2.998153" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="888">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4363 <modification_info modified_peptide="VN[115]Q[129]LSN[115]SLTI">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4364 <mod_aminoacid_mass position="2" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4365 <mod_aminoacid_mass position="3" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4366 <mod_aminoacid_mass position="6" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4367 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4368 <search_score name="xcorr" value="0.382"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4369 <search_score name="deltacn" value="0.023"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4370 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4371 <search_score name="spscore" value="4.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4372 <search_score name="sprank" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4373 <search_score name="expect" value="3.70E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4374 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4375 <search_hit hit_rank="5" peptide="AMGSNMEKVK" peptide_prev_aa="C" peptide_next_aa="K" protein="XXX_gi|358414198|ref|XP_002700672.2|" num_tot_proteins="4" num_matched_ions="0" tot_num_ions="18" calc_neutral_pep_mass="1093.526001" massdiff="0.011539" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="888">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4376 <search_score name="xcorr" value="0.374"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4377 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4378 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4379 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4380 <search_score name="sprank" value="14"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4381 <search_score name="expect" value="4.03E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4382 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4383 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4384 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4385 <spectrum_query spectrum="201208-378803.00046.00046.3" spectrumNativeID="sample=1 period=1 cycle=1211 experiment=2" start_scan="46" end_scan="46" precursor_neutral_mass="1323.524087" assumed_charge="3" index="91" retention_time_sec="725.3">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4386 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4387 <search_hit hit_rank="1" peptide="GYQCPEHRCL" peptide_prev_aa="R" peptide_next_aa="M" protein="XXX_gi|358414198|ref|XP_002700672.2|" num_tot_proteins="4" num_matched_ions="0" tot_num_ions="36" calc_neutral_pep_mass="1320.522708" massdiff="3.001380" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="222">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4388 <modification_info modified_peptide="GYQCPEHRCL">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4389 <mod_aminoacid_mass position="4" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4390 <mod_aminoacid_mass position="9" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4391 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4392 <search_score name="xcorr" value="0.429"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4393 <search_score name="deltacn" value="0.183"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4394 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4395 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4396 <search_score name="sprank" value="12"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4397 <search_score name="expect" value="9.63E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4398 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4399 <search_hit hit_rank="2" peptide="SIDEMNNAWEN" peptide_prev_aa="K" peptide_next_aa="L" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="40" calc_neutral_pep_mass="1322.508496" massdiff="1.015591" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="222">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4400 <modification_info modified_peptide="SIDEMN[115]NAWEN">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4401 <mod_aminoacid_mass position="6" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4402 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4403 <search_score name="xcorr" value="0.351"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4404 <search_score name="deltacn" value="0.011"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4405 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4406 <search_score name="spscore" value="0.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4407 <search_score name="sprank" value="11"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4408 <search_score name="expect" value="2.29E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4409 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4410 <search_hit hit_rank="3" peptide="EWQSIDIEDDA" peptide_prev_aa="K" peptide_next_aa="S" protein="XXX_gi|139948503|ref|NP_001077142.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="40" calc_neutral_pep_mass="1320.535757" massdiff="2.988331" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="222">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4411 <modification_info modified_peptide="EWQ[129]SIDIEDDA">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4412 <mod_aminoacid_mass position="3" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4413 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4414 <search_score name="xcorr" value="0.347"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4415 <search_score name="deltacn" value="0.005"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4416 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4417 <search_score name="spscore" value="0.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4418 <search_score name="sprank" value="8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4419 <search_score name="expect" value="2.38E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4420 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4421 <search_hit hit_rank="4" peptide="SIDEMNNAWEN" peptide_prev_aa="K" peptide_next_aa="L" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="40" calc_neutral_pep_mass="1322.508496" massdiff="1.015591" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="222">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4422 <modification_info modified_peptide="SIDEMNN[115]AWEN">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4423 <mod_aminoacid_mass position="7" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4424 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4425 <search_score name="xcorr" value="0.345"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4426 <search_score name="deltacn" value="0.006"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4427 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4428 <search_score name="spscore" value="0.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4429 <search_score name="sprank" value="11"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4430 <search_score name="expect" value="2.43E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4431 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4432 <search_hit hit_rank="5" peptide="CRHEPCQYGL" peptide_prev_aa="R" peptide_next_aa="M" protein="gi|358414198|ref|XP_002700672.2|" num_tot_proteins="4" num_matched_ions="1" tot_num_ions="36" calc_neutral_pep_mass="1321.506724" massdiff="2.017364" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="222">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4433 <modification_info modified_peptide="CRHEPCQ[129]YGL">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4434 <mod_aminoacid_mass position="1" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4435 <mod_aminoacid_mass position="6" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4436 <mod_aminoacid_mass position="7" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4437 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4438 <search_score name="xcorr" value="0.343"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4439 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4440 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4441 <search_score name="spscore" value="1.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4442 <search_score name="sprank" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4443 <search_score name="expect" value="2.49E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4444 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4445 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4446 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4447 <spectrum_query spectrum="201208-378803.00046.00046.2" spectrumNativeID="sample=1 period=1 cycle=1211 experiment=2" start_scan="46" end_scan="46" precursor_neutral_mass="882.349392" assumed_charge="2" index="92" retention_time_sec="725.3">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4448 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4449 <search_hit hit_rank="1" peptide="MEELSGTT" peptide_prev_aa="K" peptide_next_aa="Q" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="5" tot_num_ions="14" calc_neutral_pep_mass="882.364049" massdiff="-0.014657" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="372">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4450 <modification_info modified_peptide="M[147]EELSGTT">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4451 <mod_aminoacid_mass position="1" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4452 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4453 <search_score name="xcorr" value="0.881"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4454 <search_score name="deltacn" value="0.343"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4455 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4456 <search_score name="spscore" value="93.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4457 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4458 <search_score name="expect" value="1.00E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4459 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4460 <search_hit hit_rank="2" peptide="MTTSAVEE" peptide_prev_aa="K" peptide_next_aa="K" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="14" calc_neutral_pep_mass="882.364049" massdiff="-0.014657" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="372">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4461 <modification_info modified_peptide="M[147]TTSAVEE">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4462 <mod_aminoacid_mass position="1" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4463 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4464 <search_score name="xcorr" value="0.579"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4465 <search_score name="deltacn" value="0.121"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4466 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4467 <search_score name="spscore" value="8.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4468 <search_score name="sprank" value="12"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4469 <search_score name="expect" value="2.47E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4470 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4471 <search_hit hit_rank="3" peptide="MSQNFHT" peptide_prev_aa="K" peptide_next_aa="S" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="12" calc_neutral_pep_mass="880.338503" massdiff="2.010889" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="372">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4472 <modification_info modified_peptide="M[147]SQN[115]FHT">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4473 <mod_aminoacid_mass position="1" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4474 <mod_aminoacid_mass position="4" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4475 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4476 <search_score name="xcorr" value="0.509"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4477 <search_score name="deltacn" value="0.161"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4478 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4479 <search_score name="spscore" value="37.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4480 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4481 <search_score name="expect" value="5.19E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4482 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4483 <search_hit hit_rank="4" peptide="PSSSTDMGT" peptide_prev_aa="K" peptide_next_aa="K" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="16" calc_neutral_pep_mass="881.343662" massdiff="1.005729" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="372">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4484 <search_score name="xcorr" value="0.427"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4485 <search_score name="deltacn" value="0.096"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4486 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4487 <search_score name="spscore" value="17.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4488 <search_score name="sprank" value="6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4489 <search_score name="expect" value="1.24E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4490 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4491 <search_hit hit_rank="5" peptide="AQQEMMK" peptide_prev_aa="T" peptide_next_aa="P" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="0" tot_num_ions="12" calc_neutral_pep_mass="881.362275" massdiff="0.987117" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="372">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4492 <modification_info modified_peptide="AQ[129]QEMM[147]K">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4493 <mod_aminoacid_mass position="2" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4494 <mod_aminoacid_mass position="6" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4495 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4496 <search_score name="xcorr" value="0.386"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4497 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4498 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4499 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4500 <search_score name="sprank" value="25"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4501 <search_score name="expect" value="1.91E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4502 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4503 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4504 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4505 <spectrum_query spectrum="201208-378803.00047.00047.2" spectrumNativeID="sample=1 period=1 cycle=1211 experiment=3" start_scan="47" end_scan="47" precursor_neutral_mass="1012.443024" assumed_charge="2" index="93" retention_time_sec="727.5">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4506 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4507 <search_hit hit_rank="1" peptide="RIHSGEEAD" peptide_prev_aa="K" peptide_next_aa="V" protein="gi|528908812|ref|XP_609847.5|" num_tot_proteins="12" num_matched_ions="3" tot_num_ions="16" calc_neutral_pep_mass="1012.457387" massdiff="-0.014363" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="460">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4508 <search_score name="xcorr" value="0.560"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4509 <search_score name="deltacn" value="0.184"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4510 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4511 <search_score name="spscore" value="27.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4512 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4513 <search_score name="expect" value="1.41E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4514 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4515 <search_hit hit_rank="2" peptide="YQPEQNFS" peptide_prev_aa="R" peptide_next_aa="K" protein="gi|139948503|ref|NP_001077142.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="14" calc_neutral_pep_mass="1011.429775" massdiff="1.013249" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="460">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4516 <search_score name="xcorr" value="0.457"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4517 <search_score name="deltacn" value="0.001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4518 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4519 <search_score name="spscore" value="4.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4520 <search_score name="sprank" value="8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4521 <search_score name="expect" value="2.78E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4522 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4523 <search_hit hit_rank="3" peptide="KAMGSNMEK" peptide_prev_aa="K" peptide_next_aa="Q" protein="XXX_gi|358414198|ref|XP_002700672.2|" num_tot_proteins="4" num_matched_ions="2" tot_num_ions="16" calc_neutral_pep_mass="1011.436503" massdiff="1.006521" num_tol_term="2" num_missed_cleavages="1" num_matched_peptides="460">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4524 <modification_info modified_peptide="KAMGSN[115]M[147]EK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4525 <mod_aminoacid_mass position="6" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4526 <mod_aminoacid_mass position="7" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4527 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4528 <search_score name="xcorr" value="0.456"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4529 <search_score name="deltacn" value="0.003"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4530 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4531 <search_score name="spscore" value="4.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4532 <search_score name="sprank" value="7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4533 <search_score name="expect" value="2.79E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4534 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4535 <search_hit hit_rank="4" peptide="KEMNSGMAK" peptide_prev_aa="V" peptide_next_aa="K" protein="gi|358414198|ref|XP_002700672.2|" num_tot_proteins="4" num_matched_ions="3" tot_num_ions="16" calc_neutral_pep_mass="1011.436503" massdiff="1.006521" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="460">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4536 <modification_info modified_peptide="KEMN[115]SGM[147]AK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4537 <mod_aminoacid_mass position="4" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4538 <mod_aminoacid_mass position="7" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4539 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4540 <search_score name="xcorr" value="0.455"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4541 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4542 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4543 <search_score name="spscore" value="15.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4544 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4545 <search_score name="expect" value="2.81E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4546 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4547 <search_hit hit_rank="5" peptide="KEMNSGMAK" peptide_prev_aa="V" peptide_next_aa="K" protein="gi|358414198|ref|XP_002700672.2|" num_tot_proteins="4" num_matched_ions="3" tot_num_ions="16" calc_neutral_pep_mass="1010.452487" massdiff="1.990537" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="460">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4548 <modification_info modified_peptide="KEMNSGM[147]AK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4549 <mod_aminoacid_mass position="7" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4550 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4551 <search_score name="xcorr" value="0.406"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4552 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4553 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4554 <search_score name="spscore" value="15.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4555 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4556 <search_score name="expect" value="3.90E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4557 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4558 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4559 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4560 <spectrum_query spectrum="201208-378803.00047.00047.3" spectrumNativeID="sample=1 period=1 cycle=1211 experiment=3" start_scan="47" end_scan="47" precursor_neutral_mass="1518.664536" assumed_charge="3" index="94" retention_time_sec="727.5">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4561 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4562 <search_hit hit_rank="1" peptide="EKSYQEVPFDSTS" peptide_prev_aa="K" peptide_next_aa="T" protein="gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="48" calc_neutral_pep_mass="1515.672919" massdiff="2.991617" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="590">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4563 <search_score name="xcorr" value="0.772"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4564 <search_score name="deltacn" value="0.183"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4565 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4566 <search_score name="spscore" value="4.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4567 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4568 <search_score name="expect" value="2.07E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4569 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4570 <search_hit hit_rank="2" peptide="FCALHSASEELQQ" peptide_prev_aa="R" peptide_next_aa="A" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="4" tot_num_ions="48" calc_neutral_pep_mass="1519.661309" massdiff="-0.996773" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="590">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4571 <modification_info modified_peptide="FCALHSASEELQQ">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4572 <mod_aminoacid_mass position="2" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4573 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4574 <search_score name="xcorr" value="0.631"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4575 <search_score name="deltacn" value="0.022"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4576 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4577 <search_score name="spscore" value="7.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4578 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4579 <search_score name="expect" value="6.60E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4580 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4581 <search_hit hit_rank="3" peptide="ANGEGTPGDEQAENK" peptide_prev_aa="V" peptide_next_aa="G" protein="gi|358414198|ref|XP_002700672.2|" num_tot_proteins="4" num_matched_ions="2" tot_num_ions="56" calc_neutral_pep_mass="1516.627760" massdiff="2.036776" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="590">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4582 <modification_info modified_peptide="AN[115]GEGTPGDEQAENK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4583 <mod_aminoacid_mass position="2" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4584 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4585 <search_score name="xcorr" value="0.617"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4586 <search_score name="deltacn" value="0.018"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4587 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4588 <search_score name="spscore" value="1.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4589 <search_score name="sprank" value="10"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4590 <search_score name="expect" value="7.39E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4591 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4592 <search_hit hit_rank="4" peptide="EKSYQEVPFDSTS" peptide_prev_aa="K" peptide_next_aa="T" protein="gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="48" calc_neutral_pep_mass="1516.656935" massdiff="2.007601" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="590">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4593 <modification_info modified_peptide="EKSYQ[129]EVPFDSTS">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4594 <mod_aminoacid_mass position="5" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4595 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4596 <search_score name="xcorr" value="0.606"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4597 <search_score name="deltacn" value="0.120"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4598 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4599 <search_score name="spscore" value="4.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4600 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4601 <search_score name="expect" value="8.08E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4602 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4603 <search_hit hit_rank="5" peptide="AGMKQRCGTFGDMG" peptide_prev_aa="-" peptide_next_aa="R" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="2" num_matched_ions="2" tot_num_ions="52" calc_neutral_pep_mass="1515.626854" massdiff="3.037681" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="590">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4604 <modification_info modified_peptide="AGMKQRCGTFGDMG">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4605 <mod_aminoacid_mass position="7" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4606 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4607 <search_score name="xcorr" value="0.533"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4608 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4609 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4610 <search_score name="spscore" value="1.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4611 <search_score name="sprank" value="11"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4612 <search_score name="expect" value="1.47E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4613 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4614 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4615 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4616 <spectrum_query spectrum="201208-378803.00048.00048.2" spectrumNativeID="sample=1 period=1 cycle=1211 experiment=4" start_scan="48" end_scan="48" precursor_neutral_mass="1352.510701" assumed_charge="2" index="95" retention_time_sec="729.6">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4617 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4618 <search_hit hit_rank="1" peptide="KQYSCCGKCR" peptide_prev_aa="V" peptide_next_aa="E" protein="XXX_gi|358418103|ref|XP_600387.4|" num_tot_proteins="4" num_matched_ions="2" tot_num_ions="18" calc_neutral_pep_mass="1349.505010" massdiff="3.005692" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="76">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4619 <modification_info modified_peptide="KQ[129]YSCCGKCR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4620 <mod_aminoacid_mass position="2" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4621 <mod_aminoacid_mass position="5" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4622 <mod_aminoacid_mass position="6" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4623 <mod_aminoacid_mass position="9" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4624 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4625 <search_score name="xcorr" value="0.407"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4626 <search_score name="deltacn" value="0.043"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4627 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4628 <search_score name="spscore" value="12.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4629 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4630 <search_score name="expect" value="3.98E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4631 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4632 <search_hit hit_rank="2" peptide="AETCNAQDADEK" peptide_prev_aa="K" peptide_next_aa="R" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="22" calc_neutral_pep_mass="1352.503806" massdiff="0.006896" num_tol_term="2" num_missed_cleavages="0" num_matched_peptides="76">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4633 <modification_info modified_peptide="AETCNAQ[129]DADEK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4634 <mod_aminoacid_mass position="4" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4635 <mod_aminoacid_mass position="7" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4636 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4637 <search_score name="xcorr" value="0.389"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4638 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4639 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4640 <search_score name="spscore" value="12.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4641 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4642 <search_score name="expect" value="4.91E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4643 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4644 <search_hit hit_rank="3" peptide="AETCNAQDADEK" peptide_prev_aa="K" peptide_next_aa="R" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="22" calc_neutral_pep_mass="1352.503806" massdiff="0.006896" num_tol_term="2" num_missed_cleavages="0" num_matched_peptides="76">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4645 <modification_info modified_peptide="AETCN[115]AQDADEK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4646 <mod_aminoacid_mass position="4" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4647 <mod_aminoacid_mass position="5" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4648 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4649 <search_score name="xcorr" value="0.389"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4650 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4651 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4652 <search_score name="spscore" value="12.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4653 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4654 <search_score name="expect" value="4.91E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4655 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4656 <search_hit hit_rank="4" peptide="AETCNAQDADEK" peptide_prev_aa="K" peptide_next_aa="R" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="22" calc_neutral_pep_mass="1353.487822" massdiff="-0.977120" num_tol_term="2" num_missed_cleavages="0" num_matched_peptides="76">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4657 <modification_info modified_peptide="AETCN[115]AQ[129]DADEK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4658 <mod_aminoacid_mass position="4" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4659 <mod_aminoacid_mass position="5" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4660 <mod_aminoacid_mass position="7" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4661 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4662 <search_score name="xcorr" value="0.389"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4663 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4664 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4665 <search_score name="spscore" value="12.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4666 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4667 <search_score name="expect" value="4.91E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4668 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4669 <search_hit hit_rank="5" peptide="AETCNAQDADEK" peptide_prev_aa="K" peptide_next_aa="R" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="22" calc_neutral_pep_mass="1351.519790" massdiff="0.990912" num_tol_term="2" num_missed_cleavages="0" num_matched_peptides="76">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4670 <modification_info modified_peptide="AETCNAQDADEK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4671 <mod_aminoacid_mass position="4" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4672 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4673 <search_score name="xcorr" value="0.389"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4674 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4675 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4676 <search_score name="spscore" value="12.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4677 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4678 <search_score name="expect" value="4.91E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4679 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4680 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4681 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4682 <spectrum_query spectrum="201208-378803.00048.00048.3" spectrumNativeID="sample=1 period=1 cycle=1211 experiment=4" start_scan="48" end_scan="48" precursor_neutral_mass="2028.766052" assumed_charge="3" index="96" retention_time_sec="729.6">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4683 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4684 <search_hit hit_rank="1" peptide="INPNNDSWDYALEEEES" peptide_prev_aa="K" peptide_next_aa="A" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="64" calc_neutral_pep_mass="2025.796342" massdiff="2.969710" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="80">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4685 <modification_info modified_peptide="IN[115]PN[115]NDSWDYALEEEES">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4686 <mod_aminoacid_mass position="2" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4687 <mod_aminoacid_mass position="4" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4688 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4689 <search_score name="xcorr" value="0.321"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4690 <search_score name="deltacn" value="0.161"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4691 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4692 <search_score name="spscore" value="2.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4693 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4694 <search_score name="expect" value="2.61E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4695 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4696 <search_hit hit_rank="2" peptide="INPNNDSWDYALEEEES" peptide_prev_aa="K" peptide_next_aa="A" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="64" calc_neutral_pep_mass="2025.796342" massdiff="2.969710" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="80">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4697 <modification_info modified_peptide="IN[115]PNN[115]DSWDYALEEEES">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4698 <mod_aminoacid_mass position="2" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4699 <mod_aminoacid_mass position="5" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4700 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4701 <search_score name="xcorr" value="0.321"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4702 <search_score name="deltacn" value="0.161"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4703 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4704 <search_score name="spscore" value="2.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4705 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4706 <search_score name="expect" value="2.61E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4707 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4708 <search_hit hit_rank="3" peptide="RMVNNGHSFNVEYDDSQ" peptide_prev_aa="R" peptide_next_aa="D" protein="gi|30466252|ref|NP_848667.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="64" calc_neutral_pep_mass="2029.795951" massdiff="-1.029899" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="80">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4709 <modification_info modified_peptide="RM[147]VN[115]N[115]GHSFN[115]VEYDDSQ">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4710 <mod_aminoacid_mass position="2" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4711 <mod_aminoacid_mass position="4" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4712 <mod_aminoacid_mass position="5" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4713 <mod_aminoacid_mass position="10" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4714 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4715 <search_score name="xcorr" value="0.270"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4716 <search_score name="deltacn" value="0.030"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4717 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4718 <search_score name="spscore" value="1.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4719 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4720 <search_score name="expect" value="4.63E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4721 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4722 <search_hit hit_rank="4" peptide="EEEELAYDWSDNNPNIS" peptide_prev_aa="K" peptide_next_aa="A" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="64" calc_neutral_pep_mass="2026.780358" massdiff="1.985694" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="80">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4723 <modification_info modified_peptide="EEEELAYDWSDN[115]N[115]PN[115]IS">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4724 <mod_aminoacid_mass position="12" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4725 <mod_aminoacid_mass position="13" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4726 <mod_aminoacid_mass position="15" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4727 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4728 <search_score name="xcorr" value="0.262"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4729 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4730 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4731 <search_score name="spscore" value="5.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4732 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4733 <search_score name="expect" value="5.06E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4734 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4735 <search_hit hit_rank="5" peptide="EEEELAYDWSDNNPNIS" peptide_prev_aa="K" peptide_next_aa="A" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="64" calc_neutral_pep_mass="2025.796342" massdiff="2.969710" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="80">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4736 <modification_info modified_peptide="EEEELAYDWSDN[115]NPN[115]IS">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4737 <mod_aminoacid_mass position="12" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4738 <mod_aminoacid_mass position="15" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4739 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4740 <search_score name="xcorr" value="0.257"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4741 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4742 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4743 <search_score name="spscore" value="5.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4744 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4745 <search_score name="expect" value="5.31E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4746 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4747 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4748 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4749 <spectrum_query spectrum="201208-378803.00049.00049.2" spectrumNativeID="sample=1 period=1 cycle=1211 experiment=5" start_scan="49" end_scan="49" precursor_neutral_mass="994.454933" assumed_charge="2" index="97" retention_time_sec="731.7">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4750 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4751 <search_hit hit_rank="1" peptide="EVSQKENTG" peptide_prev_aa="R" peptide_next_aa="Q" protein="gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="16" calc_neutral_pep_mass="992.429836" massdiff="2.025097" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="662">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4752 <modification_info modified_peptide="EVSQ[129]KEN[115]TG">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4753 <mod_aminoacid_mass position="4" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4754 <mod_aminoacid_mass position="7" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4755 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4756 <search_score name="xcorr" value="0.699"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4757 <search_score name="deltacn" value="0.100"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4758 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4759 <search_score name="spscore" value="6.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4760 <search_score name="sprank" value="19"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4761 <search_score name="expect" value="1.04E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4762 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4763 <search_hit hit_rank="2" peptide="KAMGSNMEK" peptide_prev_aa="K" peptide_next_aa="Q" protein="XXX_gi|358414198|ref|XP_002700672.2|" num_tot_proteins="4" num_matched_ions="2" tot_num_ions="16" calc_neutral_pep_mass="995.441603" massdiff="-0.986670" num_tol_term="2" num_missed_cleavages="1" num_matched_peptides="662">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4764 <modification_info modified_peptide="KAMGSN[115]MEK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4765 <mod_aminoacid_mass position="6" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4766 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4767 <search_score name="xcorr" value="0.629"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4768 <search_score name="deltacn" value="0.045"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4769 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4770 <search_score name="spscore" value="7.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4771 <search_score name="sprank" value="14"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4772 <search_score name="expect" value="1.64E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4773 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4774 <search_hit hit_rank="3" peptide="ESISSSEQK" peptide_prev_aa="A" peptide_next_aa="H" protein="gi|528953238|ref|XP_005208082.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="16" calc_neutral_pep_mass="994.445485" massdiff="0.009447" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="662">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4775 <modification_info modified_peptide="ESISSSEQ[129]K">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4776 <mod_aminoacid_mass position="8" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4777 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4778 <search_score name="xcorr" value="0.601"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4779 <search_score name="deltacn" value="0.023"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4780 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4781 <search_score name="spscore" value="1.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4782 <search_score name="sprank" value="30"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4783 <search_score name="expect" value="1.97E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4784 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4785 <search_hit hit_rank="4" peptide="LSTSEENSK" peptide_prev_aa="Q" peptide_next_aa="K" protein="gi|27806963|ref|NP_776953.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="16" calc_neutral_pep_mass="994.445485" massdiff="0.009447" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="662">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4786 <modification_info modified_peptide="LSTSEEN[115]SK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4787 <mod_aminoacid_mass position="7" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4788 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4789 <search_score name="xcorr" value="0.587"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4790 <search_score name="deltacn" value="0.004"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4791 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4792 <search_score name="spscore" value="7.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4793 <search_score name="sprank" value="16"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4794 <search_score name="expect" value="2.16E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4795 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4796 <search_hit hit_rank="5" peptide="KEMNSGMAK" peptide_prev_aa="V" peptide_next_aa="K" protein="gi|358414198|ref|XP_002700672.2|" num_tot_proteins="4" num_matched_ions="3" tot_num_ions="16" calc_neutral_pep_mass="994.457587" massdiff="-0.002654" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="662">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4797 <search_score name="xcorr" value="0.585"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4798 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4799 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4800 <search_score name="spscore" value="14.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4801 <search_score name="sprank" value="6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4802 <search_score name="expect" value="2.19E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4803 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4804 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4805 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4806 <spectrum_query spectrum="201208-378803.00049.00049.3" spectrumNativeID="sample=1 period=1 cycle=1211 experiment=5" start_scan="49" end_scan="49" precursor_neutral_mass="1491.682399" assumed_charge="3" index="98" retention_time_sec="731.7">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4807 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4808 <search_hit hit_rank="1" peptide="LQQYMQPNILNQ" peptide_prev_aa="R" peptide_next_aa="E" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="3" tot_num_ions="44" calc_neutral_pep_mass="1491.691547" massdiff="-0.009148" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="1226">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4809 <modification_info modified_peptide="LQ[129]Q[129]YMQPNILN[115]Q">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4810 <mod_aminoacid_mass position="2" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4811 <mod_aminoacid_mass position="3" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4812 <mod_aminoacid_mass position="11" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4813 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4814 <search_score name="xcorr" value="0.979"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4815 <search_score name="deltacn" value="0.040"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4816 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4817 <search_score name="spscore" value="6.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4818 <search_score name="sprank" value="7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4819 <search_score name="expect" value="4.14E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4820 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4821 <search_hit hit_rank="2" peptide="HTKCAEVEEELF" peptide_prev_aa="R" peptide_next_aa="Q" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="44" calc_neutral_pep_mass="1491.655161" massdiff="0.027238" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1226">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4822 <modification_info modified_peptide="HTKCAEVEEELF">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4823 <mod_aminoacid_mass position="4" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4824 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4825 <search_score name="xcorr" value="0.940"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4826 <search_score name="deltacn" value="0.020"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4827 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4828 <search_score name="spscore" value="7.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4829 <search_score name="sprank" value="4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4830 <search_score name="expect" value="5.37E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4831 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4832 <search_hit hit_rank="3" peptide="LQQYMQPNILNQ" peptide_prev_aa="R" peptide_next_aa="E" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="3" tot_num_ions="44" calc_neutral_pep_mass="1491.691547" massdiff="-0.009148" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="1226">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4833 <modification_info modified_peptide="LQ[129]Q[129]YMQPNILNQ[129]">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4834 <mod_aminoacid_mass position="2" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4835 <mod_aminoacid_mass position="3" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4836 <mod_aminoacid_mass position="12" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4837 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4838 <search_score name="xcorr" value="0.921"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4839 <search_score name="deltacn" value="0.116"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4840 <search_score name="deltacnstar" value="0.091"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4841 <search_score name="spscore" value="6.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4842 <search_score name="sprank" value="7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4843 <search_score name="expect" value="6.07E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4844 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4845 <search_hit hit_rank="4" peptide="LQQYMQPNILNQ" peptide_prev_aa="R" peptide_next_aa="E" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="44" calc_neutral_pep_mass="1491.691547" massdiff="-0.009148" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="1226">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4846 <modification_info modified_peptide="LQ[129]Q[129]YMQPN[115]ILNQ">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4847 <mod_aminoacid_mass position="2" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4848 <mod_aminoacid_mass position="3" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4849 <mod_aminoacid_mass position="8" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4850 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4851 <search_score name="xcorr" value="0.838"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4852 <search_score name="deltacn" value="0.028"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4853 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4854 <search_score name="spscore" value="2.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4855 <search_score name="sprank" value="21"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4856 <search_score name="expect" value="1.06E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4857 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4858 <search_hit hit_rank="5" peptide="CQAEDKGACLLPK" peptide_prev_aa="C" peptide_next_aa="I" protein="gi|30794280|ref|NP_851335.1|" num_tot_proteins="1" num_matched_ions="3" tot_num_ions="48" calc_neutral_pep_mass="1490.674517" massdiff="1.007882" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1226">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4859 <modification_info modified_peptide="CQAEDKGACLLPK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4860 <mod_aminoacid_mass position="1" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4861 <mod_aminoacid_mass position="9" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4862 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4863 <search_score name="xcorr" value="0.814"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4864 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4865 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4866 <search_score name="spscore" value="6.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4867 <search_score name="sprank" value="9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4868 <search_score name="expect" value="1.23E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4869 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4870 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4871 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4872 <spectrum_query spectrum="201208-378803.00050.00050.2" spectrumNativeID="sample=1 period=1 cycle=1212 experiment=2" start_scan="50" end_scan="50" precursor_neutral_mass="1304.605855" assumed_charge="2" index="99" retention_time_sec="734.3">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4873 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4874 <search_hit hit_rank="1" peptide="PGGPQASTTFWR" peptide_prev_aa="A" peptide_next_aa="S" protein="gi|358418103|ref|XP_600387.4|" num_tot_proteins="4" num_matched_ions="3" tot_num_ions="22" calc_neutral_pep_mass="1304.614951" massdiff="-0.009095" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="770">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4875 <modification_info modified_peptide="PGGPQ[129]ASTTFWR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4876 <mod_aminoacid_mass position="5" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4877 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4878 <search_score name="xcorr" value="0.414"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4879 <search_score name="deltacn" value="0.090"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4880 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4881 <search_score name="spscore" value="14.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4882 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4883 <search_score name="expect" value="1.23E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4884 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4885 <search_hit hit_rank="2" peptide="QGFGNVGLHSMR" peptide_prev_aa="V" peptide_next_aa="Y" protein="gi|32880221|ref|NP_872593.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="22" calc_neutral_pep_mass="1302.613905" massdiff="1.991951" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="770">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4886 <modification_info modified_peptide="QGFGN[115]VGLHSMR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4887 <mod_aminoacid_mass position="5" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4888 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4889 <search_score name="xcorr" value="0.377"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4890 <search_score name="deltacn" value="0.001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4891 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4892 <search_score name="spscore" value="7.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4893 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4894 <search_score name="expect" value="1.94E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4895 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4896 <search_hit hit_rank="3" peptide="KVEPKETEGCK" peptide_prev_aa="A" peptide_next_aa="S" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="0" tot_num_ions="20" calc_neutral_pep_mass="1304.628218" massdiff="-0.022362" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="770">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4897 <modification_info modified_peptide="KVEPKETEGCK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4898 <mod_aminoacid_mass position="10" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4899 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4900 <search_score name="xcorr" value="0.377"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4901 <search_score name="deltacn" value="0.046"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4902 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4903 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4904 <search_score name="sprank" value="18"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4905 <search_score name="expect" value="1.95E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4906 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4907 <search_hit hit_rank="4" peptide="RDAAAESYHRE" peptide_prev_aa="R" peptide_next_aa="D" protein="XXX_gi|32880221|ref|NP_872593.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="20" calc_neutral_pep_mass="1303.590526" massdiff="1.015329" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="770">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4908 <search_score name="xcorr" value="0.360"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4909 <search_score name="deltacn" value="0.021"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4910 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4911 <search_score name="spscore" value="4.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4912 <search_score name="sprank" value="11"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4913 <search_score name="expect" value="2.41E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4914 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4915 <search_hit hit_rank="5" peptide="EGRSEQWGTPR" peptide_prev_aa="G" peptide_next_aa="H" protein="XXX_gi|528961840|ref|XP_005211303.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="20" calc_neutral_pep_mass="1301.611262" massdiff="2.994594" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="770">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4916 <search_score name="xcorr" value="0.352"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4917 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4918 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4919 <search_score name="spscore" value="5.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4920 <search_score name="sprank" value="7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4921 <search_score name="expect" value="2.65E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4922 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4923 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4924 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4925 <spectrum_query spectrum="201208-378803.00050.00050.3" spectrumNativeID="sample=1 period=1 cycle=1212 experiment=2" start_scan="50" end_scan="50" precursor_neutral_mass="1956.908783" assumed_charge="3" index="100" retention_time_sec="734.3">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4926 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4927 <search_hit hit_rank="1" peptide="NARLENSEYVVSCDAVK" peptide_prev_aa="M" peptide_next_aa="T" protein="gi|529012038|ref|XP_005226889.1|" num_tot_proteins="2" num_matched_ions="4" tot_num_ions="64" calc_neutral_pep_mass="1954.894222" massdiff="2.014561" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1452">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4928 <modification_info modified_peptide="N[115]ARLENSEYVVSCDAVK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4929 <mod_aminoacid_mass position="1" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4930 <mod_aminoacid_mass position="13" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4931 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4932 <search_score name="xcorr" value="0.793"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4933 <search_score name="deltacn" value="0.115"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4934 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4935 <search_score name="spscore" value="7.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4936 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4937 <search_score name="expect" value="1.02E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4938 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4939 <search_hit hit_rank="2" peptide="QWHVEDLVPWIEDCK" peptide_prev_aa="Y" peptide_next_aa="A" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="56" calc_neutral_pep_mass="1954.877116" massdiff="2.031667" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="1452">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4940 <modification_info modified_peptide="Q[129]WHVEDLVPWIEDCK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4941 <mod_aminoacid_mass position="1" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4942 <mod_aminoacid_mass position="14" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4943 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4944 <search_score name="xcorr" value="0.702"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4945 <search_score name="deltacn" value="0.225"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4946 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4947 <search_score name="spscore" value="3.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4948 <search_score name="sprank" value="10"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4949 <search_score name="expect" value="1.91E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4950 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4951 <search_hit hit_rank="3" peptide="EDIKQMEAESISSSEQK" peptide_prev_aa="M" peptide_next_aa="H" protein="gi|528953238|ref|XP_005208082.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="64" calc_neutral_pep_mass="1954.867718" massdiff="2.041065" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1452">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4952 <modification_info modified_peptide="EDIKQ[129]M[147]EAESISSSEQK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4953 <mod_aminoacid_mass position="5" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4954 <mod_aminoacid_mass position="6" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4955 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4956 <search_score name="xcorr" value="0.543"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4957 <search_score name="deltacn" value="0.041"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4958 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4959 <search_score name="spscore" value="2.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4960 <search_score name="sprank" value="11"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4961 <search_score name="expect" value="5.67E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4962 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4963 <search_hit hit_rank="4" peptide="AENLQEHQQRRAEFEA" peptide_prev_aa="K" peptide_next_aa="Q" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="60" calc_neutral_pep_mass="1955.908567" massdiff="1.000216" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="1452">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4964 <modification_info modified_peptide="AENLQEHQQ[129]RRAEFEA">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4965 <mod_aminoacid_mass position="9" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4966 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4967 <search_score name="xcorr" value="0.521"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4968 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4969 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4970 <search_score name="spscore" value="1.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4971 <search_score name="sprank" value="17"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4972 <search_score name="expect" value="6.61E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4973 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4974 <search_hit hit_rank="5" peptide="AENLQEHQQRRAEFEA" peptide_prev_aa="K" peptide_next_aa="Q" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="60" calc_neutral_pep_mass="1955.908567" massdiff="1.000216" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="1452">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4975 <modification_info modified_peptide="AENLQEHQ[129]QRRAEFEA">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4976 <mod_aminoacid_mass position="8" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4977 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4978 <search_score name="xcorr" value="0.521"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4979 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4980 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4981 <search_score name="spscore" value="1.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4982 <search_score name="sprank" value="17"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4983 <search_score name="expect" value="6.61E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4984 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4985 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4986 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4987 <spectrum_query spectrum="201208-378803.00051.00051.3" spectrumNativeID="sample=1 period=1 cycle=1212 experiment=3" start_scan="51" end_scan="51" precursor_neutral_mass="1728.720217" assumed_charge="3" index="101" retention_time_sec="736.5">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4988 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4989 <search_hit hit_rank="1" peptide="SGAERFSSSNQPNFTP" peptide_prev_aa="K" peptide_next_aa="I" protein="XXX_gi|119924469|ref|XP_001252524.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="60" calc_neutral_pep_mass="1727.727475" massdiff="0.992742" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="424">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4990 <modification_info modified_peptide="SGAERFSSSN[115]Q[129]PN[115]FTP">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4991 <mod_aminoacid_mass position="10" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4992 <mod_aminoacid_mass position="11" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4993 <mod_aminoacid_mass position="13" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4994 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4995 <search_score name="xcorr" value="0.765"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4996 <search_score name="deltacn" value="0.013"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4997 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4998 <search_score name="spscore" value="2.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
4999 <search_score name="sprank" value="16"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5000 <search_score name="expect" value="4.08E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5001 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5002 <search_hit hit_rank="2" peptide="YWQISMNRISMNGN" peptide_prev_aa="R" peptide_next_aa="V" protein="gi|28849955|ref|NP_788795.1|" num_tot_proteins="1" num_matched_ions="4" tot_num_ions="52" calc_neutral_pep_mass="1729.755211" massdiff="-1.034994" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="424">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5003 <modification_info modified_peptide="YWQISMNRISM[147]NGN[115]">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5004 <mod_aminoacid_mass position="11" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5005 <mod_aminoacid_mass position="14" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5006 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5007 <search_score name="xcorr" value="0.755"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5008 <search_score name="deltacn" value="0.064"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5009 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5010 <search_score name="spscore" value="7.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5011 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5012 <search_score name="expect" value="4.38E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5013 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5014 <search_hit hit_rank="3" peptide="YWQISMNRISMNGN" peptide_prev_aa="R" peptide_next_aa="V" protein="gi|28849955|ref|NP_788795.1|" num_tot_proteins="1" num_matched_ions="4" tot_num_ions="52" calc_neutral_pep_mass="1729.755211" massdiff="-1.034994" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="424">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5015 <modification_info modified_peptide="YWQISMNRISM[147]N[115]GN">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5016 <mod_aminoacid_mass position="11" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5017 <mod_aminoacid_mass position="12" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5018 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5019 <search_score name="xcorr" value="0.755"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5020 <search_score name="deltacn" value="0.063"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5021 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5022 <search_score name="spscore" value="7.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5023 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5024 <search_score name="expect" value="4.40E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5025 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5026 <search_hit hit_rank="4" peptide="EENTNKEMTTSAVEQ" peptide_prev_aa="K" peptide_next_aa="E" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="4" tot_num_ions="56" calc_neutral_pep_mass="1725.736309" massdiff="2.983908" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="424">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5027 <modification_info modified_peptide="EENTNKEM[147]TTSAVEQ">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5028 <mod_aminoacid_mass position="8" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5029 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5030 <search_score name="xcorr" value="0.707"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5031 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5032 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5033 <search_score name="spscore" value="5.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5034 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5035 <search_score name="expect" value="6.26E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5036 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5037 <search_hit hit_rank="5" peptide="EENTNKEMTTSAVEQ" peptide_prev_aa="K" peptide_next_aa="E" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="3" tot_num_ions="56" calc_neutral_pep_mass="1726.720325" massdiff="1.999892" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="424">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5038 <modification_info modified_peptide="EEN[115]TNKEM[147]TTSAVEQ">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5039 <mod_aminoacid_mass position="3" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5040 <mod_aminoacid_mass position="8" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5041 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5042 <search_score name="xcorr" value="0.706"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5043 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5044 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5045 <search_score name="spscore" value="3.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5046 <search_score name="sprank" value="10"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5047 <search_score name="expect" value="6.33E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5048 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5049 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5050 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5051 <spectrum_query spectrum="201208-378803.00051.00051.2" spectrumNativeID="sample=1 period=1 cycle=1212 experiment=3" start_scan="51" end_scan="51" precursor_neutral_mass="1152.480145" assumed_charge="2" index="102" retention_time_sec="736.5">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5052 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5053 <search_hit hit_rank="1" peptide="SSSNHLNFTF" peptide_prev_aa="K" peptide_next_aa="G" protein="XXX_gi|28849955|ref|NP_788795.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="18" calc_neutral_pep_mass="1153.504003" massdiff="-1.023859" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="300">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5054 <modification_info modified_peptide="SSSN[115]HLNFTF">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5055 <mod_aminoacid_mass position="4" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5056 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5057 <search_score name="xcorr" value="0.498"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5058 <search_score name="deltacn" value="0.223"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5059 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5060 <search_score name="spscore" value="4.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5061 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5062 <search_score name="expect" value="2.66E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5063 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5064 <search_hit hit_rank="2" peptide="SSDTNIQICL" peptide_prev_aa="R" peptide_next_aa="L" protein="XXX_gi|528921178|ref|XP_592304.7|" num_tot_proteins="3" num_matched_ions="0" tot_num_ions="18" calc_neutral_pep_mass="1152.485637" massdiff="-0.005492" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="300">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5065 <modification_info modified_peptide="SSDTN[115]IQ[129]ICL">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5066 <mod_aminoacid_mass position="5" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5067 <mod_aminoacid_mass position="7" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5068 <mod_aminoacid_mass position="9" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5069 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5070 <search_score name="xcorr" value="0.387"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5071 <search_score name="deltacn" value="0.254"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5072 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5073 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5074 <search_score name="sprank" value="13"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5075 <search_score name="expect" value="9.65E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5076 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5077 <search_hit hit_rank="3" peptide="TCRCLSEPK" peptide_prev_aa="I" peptide_next_aa="L" protein="XXX_gi|528921178|ref|XP_592304.7|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="16" calc_neutral_pep_mass="1151.495096" massdiff="0.985049" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="300">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5078 <modification_info modified_peptide="TCRCLSEPK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5079 <mod_aminoacid_mass position="2" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5080 <mod_aminoacid_mass position="4" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5081 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5082 <search_score name="xcorr" value="0.289"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5083 <search_score name="deltacn" value="0.015"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5084 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5085 <search_score name="spscore" value="2.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5086 <search_score name="sprank" value="4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5087 <search_score name="expect" value="3.01E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5088 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5089 <search_hit hit_rank="4" peptide="QDETSESGIDA" peptide_prev_aa="K" peptide_next_aa="M" protein="XXX_gi|528953234|ref|XP_005208080.1|" num_tot_proteins="6" num_matched_ions="2" tot_num_ions="20" calc_neutral_pep_mass="1150.462592" massdiff="2.017553" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="300">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5090 <search_score name="xcorr" value="0.284"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5091 <search_score name="deltacn" value="0.034"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5092 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5093 <search_score name="spscore" value="4.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5094 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5095 <search_score name="expect" value="3.16E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5096 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5097 <search_hit hit_rank="5" peptide="SSDEETLSER" peptide_prev_aa="S" peptide_next_aa="S" protein="gi|528944676|ref|XP_005204734.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="18" calc_neutral_pep_mass="1151.494226" massdiff="0.985919" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="300">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5098 <search_score name="xcorr" value="0.275"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5099 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5100 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5101 <search_score name="spscore" value="1.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5102 <search_score name="sprank" value="8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5103 <search_score name="expect" value="3.54E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5104 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5105 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5106 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5107 <spectrum_query spectrum="201208-378803.00052.00052.3" spectrumNativeID="sample=1 period=1 cycle=1212 experiment=4" start_scan="52" end_scan="52" precursor_neutral_mass="1791.896101" assumed_charge="3" index="103" retention_time_sec="738.6">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5108 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5109 <search_hit hit_rank="1" peptide="IEEHKVFANEVNAHR" peptide_prev_aa="Q" peptide_next_aa="D" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="4" tot_num_ions="56" calc_neutral_pep_mass="1792.885646" massdiff="-0.989545" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1506">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5110 <modification_info modified_peptide="IEEHKVFAN[115]EVNAHR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5111 <mod_aminoacid_mass position="9" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5112 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5113 <search_score name="xcorr" value="0.743"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5114 <search_score name="deltacn" value="0.105"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5115 <search_score name="deltacnstar" value="0.081"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5116 <search_score name="spscore" value="11.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5117 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5118 <search_score name="expect" value="7.84E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5119 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5120 <search_hit hit_rank="2" peptide="IEEHKVFANEVNAHR" peptide_prev_aa="Q" peptide_next_aa="D" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="4" tot_num_ions="56" calc_neutral_pep_mass="1792.885646" massdiff="-0.989545" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1506">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5121 <modification_info modified_peptide="IEEHKVFANEVN[115]AHR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5122 <mod_aminoacid_mass position="12" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5123 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5124 <search_score name="xcorr" value="0.683"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5125 <search_score name="deltacn" value="0.026"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5126 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5127 <search_score name="spscore" value="11.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5128 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5129 <search_score name="expect" value="1.25E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5130 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5131 <search_hit hit_rank="3" peptide="GALGPGQLMAEANRTYK" peptide_prev_aa="D" peptide_next_aa="V" protein="XXX_gi|528921178|ref|XP_592304.7|" num_tot_proteins="3" num_matched_ions="4" tot_num_ions="64" calc_neutral_pep_mass="1791.893753" massdiff="0.002348" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1506">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5132 <modification_info modified_peptide="GALGPGQLM[147]AEANRTYK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5133 <mod_aminoacid_mass position="9" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5134 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5135 <search_score name="xcorr" value="0.665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5136 <search_score name="deltacn" value="0.109"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5137 <search_score name="deltacnstar" value="0.105"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5138 <search_score name="spscore" value="6.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5139 <search_score name="sprank" value="4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5140 <search_score name="expect" value="1.43E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5141 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5142 <search_hit hit_rank="4" peptide="GALGPGQLMAEANRTYK" peptide_prev_aa="D" peptide_next_aa="V" protein="XXX_gi|528921178|ref|XP_592304.7|" num_tot_proteins="3" num_matched_ions="4" tot_num_ions="64" calc_neutral_pep_mass="1792.877769" massdiff="-0.981668" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1506">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5143 <modification_info modified_peptide="GALGPGQ[129]LM[147]AEANRTYK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5144 <mod_aminoacid_mass position="7" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5145 <mod_aminoacid_mass position="9" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5146 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5147 <search_score name="xcorr" value="0.595"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5148 <search_score name="deltacn" value="0.004"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5149 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5150 <search_score name="spscore" value="6.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5151 <search_score name="sprank" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5152 <search_score name="expect" value="2.45E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5153 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5154 <search_hit hit_rank="5" peptide="AQSDPATIEMILNELK" peptide_prev_aa="S" peptide_next_aa="T" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="60" calc_neutral_pep_mass="1788.881517" massdiff="3.014584" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="1506">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5155 <modification_info modified_peptide="AQSDPATIEM[147]ILN[115]ELK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5156 <mod_aminoacid_mass position="10" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5157 <mod_aminoacid_mass position="13" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5158 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5159 <search_score name="xcorr" value="0.593"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5160 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5161 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5162 <search_score name="spscore" value="0.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5163 <search_score name="sprank" value="24"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5164 <search_score name="expect" value="2.50E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5165 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5166 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5167 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5168 <spectrum_query spectrum="201208-378803.00052.00052.2" spectrumNativeID="sample=1 period=1 cycle=1212 experiment=4" start_scan="52" end_scan="52" precursor_neutral_mass="1194.597401" assumed_charge="2" index="104" retention_time_sec="738.6">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5169 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5170 <search_hit hit_rank="1" peptide="AIESKHTDRH" peptide_prev_aa="R" peptide_next_aa="R" protein="XXX_gi|30794280|ref|NP_851335.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="18" calc_neutral_pep_mass="1192.594884" massdiff="2.002517" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="608">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5171 <search_score name="xcorr" value="0.606"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5172 <search_score name="deltacn" value="0.188"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5173 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5174 <search_score name="spscore" value="11.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5175 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5176 <search_score name="expect" value="1.52E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5177 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5178 <search_hit hit_rank="2" peptide="DTHKSEIAHR" peptide_prev_aa="R" peptide_next_aa="F" protein="gi|30794280|ref|NP_851335.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="18" calc_neutral_pep_mass="1192.594884" massdiff="2.002517" num_tol_term="2" num_missed_cleavages="1" num_matched_peptides="608">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5179 <search_score name="xcorr" value="0.492"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5180 <search_score name="deltacn" value="0.006"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5181 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5182 <search_score name="spscore" value="8.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5183 <search_score name="sprank" value="4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5184 <search_score name="expect" value="5.30E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5185 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5186 <search_hit hit_rank="3" peptide="ANMLKNINTR" peptide_prev_aa="V" peptide_next_aa="L" protein="XXX_gi|119924469|ref|XP_001252524.1|" num_tot_proteins="1" num_matched_ions="3" tot_num_ions="18" calc_neutral_pep_mass="1191.591758" massdiff="3.005643" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="608">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5187 <modification_info modified_peptide="AN[115]M[147]LKN[115]INTR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5188 <mod_aminoacid_mass position="2" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5189 <mod_aminoacid_mass position="3" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5190 <mod_aminoacid_mass position="6" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5191 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5192 <search_score name="xcorr" value="0.489"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5193 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5194 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5195 <search_score name="spscore" value="16.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5196 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5197 <search_score name="expect" value="5.49E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5198 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5199 <search_hit hit_rank="4" peptide="ANMLKNINTR" peptide_prev_aa="V" peptide_next_aa="L" protein="XXX_gi|119924469|ref|XP_001252524.1|" num_tot_proteins="1" num_matched_ions="3" tot_num_ions="18" calc_neutral_pep_mass="1192.575774" massdiff="2.021627" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="608">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5200 <modification_info modified_peptide="AN[115]M[147]LKN[115]IN[115]TR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5201 <mod_aminoacid_mass position="2" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5202 <mod_aminoacid_mass position="3" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5203 <mod_aminoacid_mass position="6" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5204 <mod_aminoacid_mass position="8" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5205 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5206 <search_score name="xcorr" value="0.488"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5207 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5208 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5209 <search_score name="spscore" value="16.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5210 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5211 <search_score name="expect" value="5.52E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5212 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5213 <search_hit hit_rank="5" peptide="ANMLKNINTR" peptide_prev_aa="V" peptide_next_aa="L" protein="XXX_gi|119924469|ref|XP_001252524.1|" num_tot_proteins="1" num_matched_ions="3" tot_num_ions="18" calc_neutral_pep_mass="1191.591758" massdiff="3.005643" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="608">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5214 <modification_info modified_peptide="AN[115]M[147]LKNIN[115]TR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5215 <mod_aminoacid_mass position="2" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5216 <mod_aminoacid_mass position="3" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5217 <mod_aminoacid_mass position="8" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5218 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5219 <search_score name="xcorr" value="0.488"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5220 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5221 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5222 <search_score name="spscore" value="16.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5223 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5224 <search_score name="expect" value="5.54E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5225 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5226 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5227 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5228 <spectrum_query spectrum="201208-378803.00053.00053.3" spectrumNativeID="sample=1 period=1 cycle=1212 experiment=5" start_scan="53" end_scan="53" precursor_neutral_mass="1750.891744" assumed_charge="3" index="105" retention_time_sec="740.7">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5229 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5230 <search_hit hit_rank="1" peptide="QSLFKLQNGTQDLEK" peptide_prev_aa="I" peptide_next_aa="Q" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="56" calc_neutral_pep_mass="1748.894480" massdiff="1.997264" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1954">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5231 <modification_info modified_peptide="QSLFKLQNGTQ[129]DLEK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5232 <mod_aminoacid_mass position="11" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5233 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5234 <search_score name="xcorr" value="0.997"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5235 <search_score name="deltacn" value="0.123"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5236 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5237 <search_score name="spscore" value="0.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5238 <search_score name="sprank" value="26"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5239 <search_score name="expect" value="7.76E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5240 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5241 <search_hit hit_rank="2" peptide="SASIFQENGEVVNINK" peptide_prev_aa="D" peptide_next_aa="S" protein="XXX_gi|528903801|ref|XP_871686.4|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="60" calc_neutral_pep_mass="1747.874078" massdiff="3.017665" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="1954">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5242 <search_score name="xcorr" value="0.875"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5243 <search_score name="deltacn" value="0.013"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5244 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5245 <search_score name="spscore" value="2.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5246 <search_score name="sprank" value="12"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5247 <search_score name="expect" value="1.72E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5248 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5249 <search_hit hit_rank="3" peptide="SESSAAGGQGSSRRGLNK" peptide_prev_aa="T" peptide_next_aa="P" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="68" calc_neutral_pep_mass="1747.856137" massdiff="3.035607" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="1954">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5250 <search_score name="xcorr" value="0.863"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5251 <search_score name="deltacn" value="0.058"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5252 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5253 <search_score name="spscore" value="0.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5254 <search_score name="sprank" value="25"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5255 <search_score name="expect" value="1.85E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5256 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5257 <search_hit hit_rank="4" peptide="QSLFKLQNGTQDLEK" peptide_prev_aa="I" peptide_next_aa="Q" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="56" calc_neutral_pep_mass="1748.894480" massdiff="1.997264" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1954">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5258 <modification_info modified_peptide="QSLFKLQN[115]GTQDLEK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5259 <mod_aminoacid_mass position="8" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5260 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5261 <search_score name="xcorr" value="0.813"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5262 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5263 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5264 <search_score name="spscore" value="0.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5265 <search_score name="sprank" value="26"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5266 <search_score name="expect" value="2.56E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5267 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5268 <search_hit hit_rank="5" peptide="QSLFKLQNGTQDLEK" peptide_prev_aa="I" peptide_next_aa="Q" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="56" calc_neutral_pep_mass="1749.878496" massdiff="1.013248" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1954">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5269 <modification_info modified_peptide="QSLFKLQ[129]NGTQ[129]DLEK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5270 <mod_aminoacid_mass position="7" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5271 <mod_aminoacid_mass position="11" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5272 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5273 <search_score name="xcorr" value="0.780"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5274 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5275 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5276 <search_score name="spscore" value="0.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5277 <search_score name="sprank" value="26"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5278 <search_score name="expect" value="3.16E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5279 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5280 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5281 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5282 <spectrum_query spectrum="201208-378803.00053.00053.2" spectrumNativeID="sample=1 period=1 cycle=1212 experiment=5" start_scan="53" end_scan="53" precursor_neutral_mass="1167.261162" assumed_charge="2" index="106" retention_time_sec="740.7">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5283 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5284 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5285 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5286 <spectrum_query spectrum="201208-378803.00054.00054.2" spectrumNativeID="sample=1 period=1 cycle=1213 experiment=2" start_scan="54" end_scan="54" precursor_neutral_mass="993.379707" assumed_charge="2" index="107" retention_time_sec="743.3">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5287 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5288 <search_hit hit_rank="1" peptide="GMMVYSYQ" peptide_prev_aa="R" peptide_next_aa="L" protein="XXX_gi|528920173|ref|XP_001788336.2|" num_tot_proteins="2" num_matched_ions="2" tot_num_ions="14" calc_neutral_pep_mass="993.393575" massdiff="-0.013867" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="216">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5289 <modification_info modified_peptide="GM[147]MVYSYQ">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5290 <mod_aminoacid_mass position="2" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5291 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5292 <search_score name="xcorr" value="0.530"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5293 <search_score name="deltacn" value="0.228"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5294 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5295 <search_score name="spscore" value="8.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5296 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5297 <search_score name="expect" value="1.54E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5298 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5299 <search_hit hit_rank="2" peptide="SEDNPMNQG" peptide_prev_aa="D" peptide_next_aa="-" protein="XXX_gi|139948503|ref|NP_001077142.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="16" calc_neutral_pep_mass="991.355290" massdiff="2.024417" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="216">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5300 <modification_info modified_peptide="SEDNPMNQ[129]G">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5301 <mod_aminoacid_mass position="8" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5302 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5303 <search_score name="xcorr" value="0.409"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5304 <search_score name="deltacn" value="0.034"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5305 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5306 <search_score name="spscore" value="11.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5307 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5308 <search_score name="expect" value="6.21E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5309 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5310 <search_hit hit_rank="3" peptide="TYHDLCEG" peptide_prev_aa="K" peptide_next_aa="S" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="14" calc_neutral_pep_mass="994.370212" massdiff="-0.990505" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="216">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5311 <modification_info modified_peptide="TYHDLCEG">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5312 <mod_aminoacid_mass position="6" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5313 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5314 <search_score name="xcorr" value="0.396"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5315 <search_score name="deltacn" value="0.011"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5316 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5317 <search_score name="spscore" value="5.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5318 <search_score name="sprank" value="4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5319 <search_score name="expect" value="7.29E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5320 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5321 <search_hit hit_rank="4" peptide="DLTEIQCD" peptide_prev_aa="K" peptide_next_aa="M" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="14" calc_neutral_pep_mass="993.396093" massdiff="-0.016385" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="216">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5322 <modification_info modified_peptide="DLTEIQCD">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5323 <mod_aminoacid_mass position="7" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5324 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5325 <search_score name="xcorr" value="0.391"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5326 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5327 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5328 <search_score name="spscore" value="5.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5329 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5330 <search_score name="expect" value="7.68E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5331 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5332 <search_hit hit_rank="5" peptide="DLTEIQCD" peptide_prev_aa="K" peptide_next_aa="M" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="14" calc_neutral_pep_mass="994.380109" massdiff="-1.000401" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="216">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5333 <modification_info modified_peptide="DLTEIQ[129]CD">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5334 <mod_aminoacid_mass position="6" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5335 <mod_aminoacid_mass position="7" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5336 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5337 <search_score name="xcorr" value="0.323"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5338 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5339 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5340 <search_score name="spscore" value="2.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5341 <search_score name="sprank" value="8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5342 <search_score name="expect" value="1.69E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5343 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5344 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5345 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5346 <spectrum_query spectrum="201208-378803.00054.00054.3" spectrumNativeID="sample=1 period=1 cycle=1213 experiment=2" start_scan="54" end_scan="54" precursor_neutral_mass="1490.069561" assumed_charge="3" index="108" retention_time_sec="743.3">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5347 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5348 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5349 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5350 <spectrum_query spectrum="201208-378803.00055.00055.2" spectrumNativeID="sample=1 period=1 cycle=1213 experiment=3" start_scan="55" end_scan="55" precursor_neutral_mass="1092.535424" assumed_charge="2" index="109" retention_time_sec="745.5">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5351 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5352 <search_hit hit_rank="1" peptide="AEQYLKEGR" peptide_prev_aa="N" peptide_next_aa="K" protein="XXX_gi|528993971|ref|XP_005219929.1|" num_tot_proteins="4" num_matched_ions="2" tot_num_ions="16" calc_neutral_pep_mass="1093.540389" massdiff="-1.004965" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1050">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5353 <modification_info modified_peptide="AEQ[129]YLKEGR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5354 <mod_aminoacid_mass position="3" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5355 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5356 <search_score name="xcorr" value="0.781"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5357 <search_score name="deltacn" value="0.033"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5358 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5359 <search_score name="spscore" value="18.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5360 <search_score name="sprank" value="9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5361 <search_score name="expect" value="1.52E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5362 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5363 <search_hit hit_rank="2" peptide="PQASTTFWR" peptide_prev_aa="G" peptide_next_aa="S" protein="gi|358418103|ref|XP_600387.4|" num_tot_proteins="4" num_matched_ions="3" tot_num_ions="16" calc_neutral_pep_mass="1092.535243" massdiff="0.000180" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="1050">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5364 <search_score name="xcorr" value="0.755"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5365 <search_score name="deltacn" value="0.019"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5366 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5367 <search_score name="spscore" value="39.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5368 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5369 <search_score name="expect" value="1.78E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5370 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5371 <search_hit hit_rank="3" peptide="IVGYLDEEGV" peptide_prev_aa="K" peptide_next_aa="L" protein="gi|528993971|ref|XP_005219929.1|" num_tot_proteins="4" num_matched_ions="3" tot_num_ions="18" calc_neutral_pep_mass="1092.533906" massdiff="0.001518" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="1050">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5372 <search_score name="xcorr" value="0.741"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5373 <search_score name="deltacn" value="0.102"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5374 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5375 <search_score name="spscore" value="31.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5376 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5377 <search_score name="expect" value="1.94E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5378 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5379 <search_hit hit_rank="4" peptide="AEQYLKEGR" peptide_prev_aa="N" peptide_next_aa="K" protein="XXX_gi|528993971|ref|XP_005219929.1|" num_tot_proteins="4" num_matched_ions="2" tot_num_ions="16" calc_neutral_pep_mass="1092.556373" massdiff="-0.020949" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1050">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5380 <search_score name="xcorr" value="0.665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5381 <search_score name="deltacn" value="0.013"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5382 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5383 <search_score name="spscore" value="18.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5384 <search_score name="sprank" value="9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5385 <search_score name="expect" value="3.08E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5386 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5387 <search_hit hit_rank="5" peptide="IIVSNDQFR" peptide_prev_aa="G" peptide_next_aa="D" protein="gi|528961840|ref|XP_005211303.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="16" calc_neutral_pep_mass="1092.545140" massdiff="-0.009717" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="1050">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5388 <modification_info modified_peptide="IIVSN[115]DQ[129]FR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5389 <mod_aminoacid_mass position="5" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5390 <mod_aminoacid_mass position="7" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5391 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5392 <search_score name="xcorr" value="0.657"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5393 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5394 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5395 <search_score name="spscore" value="13.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5396 <search_score name="sprank" value="13"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5397 <search_score name="expect" value="3.25E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5398 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5399 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5400 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5401 <spectrum_query spectrum="201208-378803.00055.00055.3" spectrumNativeID="sample=1 period=1 cycle=1213 experiment=3" start_scan="55" end_scan="55" precursor_neutral_mass="1638.803135" assumed_charge="3" index="110" retention_time_sec="745.5">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5402 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5403 <search_hit hit_rank="1" peptide="NEQYKLVSDTVGQR" peptide_prev_aa="A" peptide_next_aa="V" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="5" tot_num_ions="52" calc_neutral_pep_mass="1638.773697" massdiff="0.029439" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1262">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5404 <modification_info modified_peptide="N[115]EQ[129]YKLVSDTVGQ[129]R">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5405 <mod_aminoacid_mass position="1" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5406 <mod_aminoacid_mass position="3" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5407 <mod_aminoacid_mass position="13" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5408 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5409 <search_score name="xcorr" value="1.030"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5410 <search_score name="deltacn" value="0.064"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5411 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5412 <search_score name="spscore" value="25.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5413 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5414 <search_score name="expect" value="1.68E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5415 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5416 <search_hit hit_rank="2" peptide="GQHGALAREAQGVWR" peptide_prev_aa="S" peptide_next_aa="A" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="56" calc_neutral_pep_mass="1635.822986" massdiff="2.980149" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1262">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5417 <modification_info modified_peptide="GQHGALAREAQ[129]GVWR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5418 <mod_aminoacid_mass position="11" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5419 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5420 <search_score name="xcorr" value="0.964"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5421 <search_score name="deltacn" value="0.071"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5422 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5423 <search_score name="spscore" value="11.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5424 <search_score name="sprank" value="17"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5425 <search_score name="expect" value="2.32E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5426 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5427 <search_hit hit_rank="3" peptide="WVGQAERALAGHQGR" peptide_prev_aa="S" peptide_next_aa="A" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="4" tot_num_ions="56" calc_neutral_pep_mass="1635.822986" massdiff="2.980149" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1262">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5428 <modification_info modified_peptide="WVGQAERALAGHQ[129]GR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5429 <mod_aminoacid_mass position="13" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5430 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5431 <search_score name="xcorr" value="0.895"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5432 <search_score name="deltacn" value="0.010"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5433 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5434 <search_score name="spscore" value="17.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5435 <search_score name="sprank" value="6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5436 <search_score name="expect" value="3.27E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5437 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5438 <search_hit hit_rank="4" peptide="NDVLAHQATVETVNK" peptide_prev_aa="K" peptide_next_aa="A" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="5" tot_num_ions="56" calc_neutral_pep_mass="1639.805331" massdiff="-1.002195" num_tol_term="2" num_missed_cleavages="0" num_matched_peptides="1262">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5439 <modification_info modified_peptide="NDVLAHQ[129]ATVETVN[115]K">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5440 <mod_aminoacid_mass position="7" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5441 <mod_aminoacid_mass position="14" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5442 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5443 <search_score name="xcorr" value="0.886"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5444 <search_score name="deltacn" value="0.011"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5445 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5446 <search_score name="spscore" value="17.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5447 <search_score name="sprank" value="7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5448 <search_score name="expect" value="3.42E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5449 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5450 <search_hit hit_rank="5" peptide="WVGQAERALAGHQGR" peptide_prev_aa="S" peptide_next_aa="A" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="4" tot_num_ions="56" calc_neutral_pep_mass="1636.807002" massdiff="1.996133" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1262">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5451 <modification_info modified_peptide="WVGQ[129]AERALAGHQ[129]GR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5452 <mod_aminoacid_mass position="4" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5453 <mod_aminoacid_mass position="13" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5454 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5455 <search_score name="xcorr" value="0.876"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5456 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5457 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5458 <search_score name="spscore" value="15.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5459 <search_score name="sprank" value="9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5460 <search_score name="expect" value="3.60E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5461 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5462 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5463 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5464 <spectrum_query spectrum="201208-378803.00056.00056.3" spectrumNativeID="sample=1 period=1 cycle=1213 experiment=4" start_scan="56" end_scan="56" precursor_neutral_mass="1237.999185" assumed_charge="3" index="111" retention_time_sec="747.6">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5465 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5466 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5467 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5468 <spectrum_query spectrum="201208-378803.00056.00056.2" spectrumNativeID="sample=1 period=1 cycle=1213 experiment=4" start_scan="56" end_scan="56" precursor_neutral_mass="825.332790" assumed_charge="2" index="112" retention_time_sec="747.6">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5469 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5470 <search_hit hit_rank="1" peptide="MMEQQK" peptide_prev_aa="A" peptide_next_aa="P" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="10" calc_neutral_pep_mass="825.336045" massdiff="-0.003255" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="208">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5471 <modification_info modified_peptide="M[147]M[147]EQQK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5472 <mod_aminoacid_mass position="1" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5473 <mod_aminoacid_mass position="2" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5474 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5475 <search_score name="xcorr" value="0.303"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5476 <search_score name="deltacn" value="0.173"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5477 <search_score name="deltacnstar" value="0.005"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5478 <search_score name="spscore" value="2.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5479 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5480 <search_score name="expect" value="1.12E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5481 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5482 <search_hit hit_rank="2" peptide="MMEQQK" peptide_prev_aa="A" peptide_next_aa="P" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="10" calc_neutral_pep_mass="826.320061" massdiff="-0.987271" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="208">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5483 <modification_info modified_peptide="M[147]M[147]EQ[129]QK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5484 <mod_aminoacid_mass position="1" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5485 <mod_aminoacid_mass position="2" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5486 <mod_aminoacid_mass position="4" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5487 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5488 <search_score name="xcorr" value="0.302"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5489 <search_score name="deltacn" value="0.169"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5490 <search_score name="deltacnstar" value="0.005"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5491 <search_score name="spscore" value="2.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5492 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5493 <search_score name="expect" value="1.14E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5494 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5495 <search_hit hit_rank="3" peptide="MMEQQK" peptide_prev_aa="A" peptide_next_aa="P" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="10" calc_neutral_pep_mass="826.320061" massdiff="-0.987271" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="208">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5496 <modification_info modified_peptide="M[147]M[147]EQQ[129]K">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5497 <mod_aminoacid_mass position="1" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5498 <mod_aminoacid_mass position="2" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5499 <mod_aminoacid_mass position="5" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5500 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5501 <search_score name="xcorr" value="0.300"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5502 <search_score name="deltacn" value="0.165"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5503 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5504 <search_score name="spscore" value="2.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5505 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5506 <search_score name="expect" value="1.17E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5507 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5508 <search_hit hit_rank="4" peptide="ASEAECR" peptide_prev_aa="E" peptide_next_aa="Q" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="0" tot_num_ions="12" calc_neutral_pep_mass="822.317783" massdiff="3.015007" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="208">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5509 <modification_info modified_peptide="ASEAECR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5510 <mod_aminoacid_mass position="6" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5511 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5512 <search_score name="xcorr" value="0.251"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5513 <search_score name="deltacn" value="0.176"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5514 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5515 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5516 <search_score name="sprank" value="6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5517 <search_score name="expect" value="2.41E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5518 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5519 <search_hit hit_rank="5" peptide="MVASELC" peptide_prev_aa="T" peptide_next_aa="-" protein="XXX_gi|358418103|ref|XP_600387.4|" num_tot_proteins="4" num_matched_ions="0" tot_num_ions="12" calc_neutral_pep_mass="825.324827" massdiff="0.007963" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="208">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5520 <modification_info modified_peptide="M[147]VASELC">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5521 <mod_aminoacid_mass position="1" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5522 <mod_aminoacid_mass position="7" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5523 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5524 <search_score name="xcorr" value="0.207"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5525 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5526 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5527 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5528 <search_score name="sprank" value="6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5529 <search_score name="expect" value="4.58E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5530 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5531 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5532 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5533 <spectrum_query spectrum="201208-378803.00057.00057.3" spectrumNativeID="sample=1 period=1 cycle=1213 experiment=5" start_scan="57" end_scan="57" precursor_neutral_mass="1722.883584" assumed_charge="3" index="113" retention_time_sec="749.7">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5534 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5535 <search_hit hit_rank="1" peptide="QQDPPIGEKEQIKGR" peptide_prev_aa="K" peptide_next_aa="L" protein="XXX_gi|329665078|ref|NP_001193236.1|" num_tot_proteins="1" num_matched_ions="4" tot_num_ions="56" calc_neutral_pep_mass="1723.874079" massdiff="-0.990495" num_tol_term="2" num_missed_cleavages="2" num_matched_peptides="1964">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5536 <modification_info modified_peptide="QQ[129]DPPIGEKEQ[129]IKGR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5537 <mod_aminoacid_mass position="2" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5538 <mod_aminoacid_mass position="11" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5539 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5540 <search_score name="xcorr" value="0.651"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5541 <search_score name="deltacn" value="0.045"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5542 <search_score name="deltacnstar" value="0.017"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5543 <search_score name="spscore" value="9.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5544 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5545 <search_score name="expect" value="2.62E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5546 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5547 <search_hit hit_rank="2" peptide="QQDPPIGEKDQIKAR" peptide_prev_aa="K" peptide_next_aa="L" protein="XXX_gi|528918160|ref|XP_005195085.1|" num_tot_proteins="26" num_matched_ions="4" tot_num_ions="56" calc_neutral_pep_mass="1723.874079" massdiff="-0.990495" num_tol_term="2" num_missed_cleavages="2" num_matched_peptides="1964">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5548 <modification_info modified_peptide="QQ[129]DPPIGEKDQ[129]IKAR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5549 <mod_aminoacid_mass position="2" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5550 <mod_aminoacid_mass position="11" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5551 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5552 <search_score name="xcorr" value="0.640"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5553 <search_score name="deltacn" value="0.029"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5554 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5555 <search_score name="spscore" value="9.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5556 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5557 <search_score name="expect" value="2.82E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5558 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5559 <search_hit hit_rank="3" peptide="KQEHLPLNWPLTDK" peptide_prev_aa="G" peptide_next_aa="R" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="3" num_matched_ions="4" tot_num_ions="52" calc_neutral_pep_mass="1719.883187" massdiff="3.000397" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1964">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5560 <modification_info modified_peptide="KQ[129]EHLPLN[115]WPLTDK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5561 <mod_aminoacid_mass position="2" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5562 <mod_aminoacid_mass position="8" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5563 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5564 <search_score name="xcorr" value="0.621"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5565 <search_score name="deltacn" value="0.056"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5566 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5567 <search_score name="spscore" value="9.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5568 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5569 <search_score name="expect" value="3.21E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5570 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5571 <search_hit hit_rank="4" peptide="GGNLVTGTQRFQEALQ" peptide_prev_aa="R" peptide_next_aa="D" protein="gi|528961840|ref|XP_005211303.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="60" calc_neutral_pep_mass="1719.842779" massdiff="3.040806" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1964">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5572 <modification_info modified_peptide="GGN[115]LVTGTQ[129]RFQEALQ">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5573 <mod_aminoacid_mass position="3" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5574 <mod_aminoacid_mass position="9" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5575 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5576 <search_score name="xcorr" value="0.587"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5577 <search_score name="deltacn" value="0.024"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5578 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5579 <search_score name="spscore" value="4.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5580 <search_score name="sprank" value="14"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5581 <search_score name="expect" value="4.09E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5582 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5583 <search_hit hit_rank="5" peptide="LLAPLAEPSSGGQHMSK" peptide_prev_aa="E" peptide_next_aa="R" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="64" calc_neutral_pep_mass="1722.861071" massdiff="0.022513" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="1964">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5584 <modification_info modified_peptide="LLAPLAEPSSGGQ[129]HMSK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5585 <mod_aminoacid_mass position="13" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5586 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5587 <search_score name="xcorr" value="0.573"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5588 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5589 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5590 <search_score name="spscore" value="3.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5591 <search_score name="sprank" value="19"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5592 <search_score name="expect" value="4.51E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5593 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5594 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5595 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5596 <spectrum_query spectrum="201208-378803.00057.00057.2" spectrumNativeID="sample=1 period=1 cycle=1213 experiment=5" start_scan="57" end_scan="57" precursor_neutral_mass="1148.589056" assumed_charge="2" index="114" retention_time_sec="749.7">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5597 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5598 <search_hit hit_rank="1" peptide="TTSTPFWLTP" peptide_prev_aa="K" peptide_next_aa="T" protein="XXX_gi|139948503|ref|NP_001077142.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="18" calc_neutral_pep_mass="1149.570626" massdiff="-0.981570" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="720">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5599 <search_score name="xcorr" value="0.371"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5600 <search_score name="deltacn" value="0.077"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5601 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5602 <search_score name="spscore" value="5.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5603 <search_score name="sprank" value="11"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5604 <search_score name="expect" value="1.07E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5605 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5606 <search_hit hit_rank="2" peptide="EGSGTVFGRLQ" peptide_prev_aa="R" peptide_next_aa="L" protein="gi|528908812|ref|XP_609847.5|" num_tot_proteins="12" num_matched_ions="1" tot_num_ions="20" calc_neutral_pep_mass="1149.577836" massdiff="-0.988780" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="720">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5607 <search_score name="xcorr" value="0.343"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5608 <search_score name="deltacn" value="0.010"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5609 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5610 <search_score name="spscore" value="1.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5611 <search_score name="sprank" value="20"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5612 <search_score name="expect" value="1.52E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5613 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5614 <search_hit hit_rank="3" peptide="VIAQLETRQS" peptide_prev_aa="R" peptide_next_aa="E" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="18" calc_neutral_pep_mass="1145.592819" massdiff="2.996238" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="720">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5615 <modification_info modified_peptide="VIAQ[129]LETRQ[129]S">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5616 <mod_aminoacid_mass position="4" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5617 <mod_aminoacid_mass position="9" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5618 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5619 <search_score name="xcorr" value="0.339"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5620 <search_score name="deltacn" value="0.014"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5621 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5622 <search_score name="spscore" value="4.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5623 <search_score name="sprank" value="13"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5624 <search_score name="expect" value="1.58E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5625 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5626 <search_hit hit_rank="4" peptide="QALIVTQTMK" peptide_prev_aa="A" peptide_next_aa="G" protein="gi|528969819|ref|XP_005213230.1|" num_tot_proteins="2" num_matched_ions="1" tot_num_ions="18" calc_neutral_pep_mass="1149.595112" massdiff="-1.006056" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="720">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5627 <modification_info modified_peptide="Q[129]ALIVTQ[129]TM[147]K">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5628 <mod_aminoacid_mass position="1" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5629 <mod_aminoacid_mass position="7" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5630 <mod_aminoacid_mass position="9" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5631 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5632 <search_score name="xcorr" value="0.334"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5633 <search_score name="deltacn" value="0.011"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5634 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5635 <search_score name="spscore" value="1.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5636 <search_score name="sprank" value="25"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5637 <search_score name="expect" value="1.68E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5638 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5639 <search_hit hit_rank="5" peptide="GVWAYVIGQR" peptide_prev_aa="N" peptide_next_aa="A" protein="XXX_gi|528921178|ref|XP_592304.7|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="18" calc_neutral_pep_mass="1148.597844" massdiff="-0.008788" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="720">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5640 <modification_info modified_peptide="GVWAYVIGQ[129]R">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5641 <mod_aminoacid_mass position="9" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5642 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5643 <search_score name="xcorr" value="0.331"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5644 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5645 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5646 <search_score name="spscore" value="2.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5647 <search_score name="sprank" value="16"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5648 <search_score name="expect" value="1.75E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5649 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5650 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5651 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5652 <spectrum_query spectrum="201208-378803.00058.00058.2" spectrumNativeID="sample=1 period=1 cycle=1214 experiment=2" start_scan="58" end_scan="58" precursor_neutral_mass="1018.402171" assumed_charge="2" index="115" retention_time_sec="752.3">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5653 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5654 <search_hit hit_rank="1" peptide="FSHGNNVMN" peptide_prev_aa="R" peptide_next_aa="V" protein="XXX_gi|30466252|ref|NP_848667.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="16" calc_neutral_pep_mass="1019.413080" massdiff="-1.010909" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="142">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5655 <modification_info modified_peptide="FSHGN[115]NVMN">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5656 <mod_aminoacid_mass position="5" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5657 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5658 <search_score name="xcorr" value="0.523"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5659 <search_score name="deltacn" value="0.046"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5660 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5661 <search_score name="spscore" value="5.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5662 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5663 <search_score name="expect" value="2.29E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5664 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5665 <search_hit hit_rank="2" peptide="QFYATNEF" peptide_prev_aa="K" peptide_next_aa="F" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="14" calc_neutral_pep_mass="1019.423628" massdiff="-1.021457" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="142">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5666 <modification_info modified_peptide="Q[129]FYATNEF">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5667 <mod_aminoacid_mass position="1" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5668 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5669 <search_score name="xcorr" value="0.499"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5670 <search_score name="deltacn" value="0.114"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5671 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5672 <search_score name="spscore" value="7.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5673 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5674 <search_score name="expect" value="2.94E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5675 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5676 <search_hit hit_rank="3" peptide="FSHGNNVMN" peptide_prev_aa="R" peptide_next_aa="V" protein="XXX_gi|30466252|ref|NP_848667.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="16" calc_neutral_pep_mass="1019.413080" massdiff="-1.010909" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="142">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5677 <modification_info modified_peptide="FSHGNN[115]VMN">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5678 <mod_aminoacid_mass position="6" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5679 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5680 <search_score name="xcorr" value="0.442"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5681 <search_score name="deltacn" value="0.326"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5682 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5683 <search_score name="spscore" value="5.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5684 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5685 <search_score name="expect" value="5.35E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5686 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5687 <search_hit hit_rank="4" peptide="EDTGSHICT" peptide_prev_aa="R" peptide_next_aa="E" protein="XXX_gi|358418103|ref|XP_600387.4|" num_tot_proteins="4" num_matched_ions="1" tot_num_ions="16" calc_neutral_pep_mass="1019.386590" massdiff="-0.984420" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="142">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5688 <modification_info modified_peptide="EDTGSHICT">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5689 <mod_aminoacid_mass position="8" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5690 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5691 <search_score name="xcorr" value="0.298"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5692 <search_score name="deltacn" value="0.003"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5693 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5694 <search_score name="spscore" value="0.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5695 <search_score name="sprank" value="9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5696 <search_score name="expect" value="2.41E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5697 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5698 <search_hit hit_rank="5" peptide="QFYATNEF" peptide_prev_aa="K" peptide_next_aa="F" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="14" calc_neutral_pep_mass="1019.423628" massdiff="-1.021457" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="142">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5699 <modification_info modified_peptide="QFYATN[115]EF">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5700 <mod_aminoacid_mass position="6" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5701 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5702 <search_score name="xcorr" value="0.297"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5703 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5704 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5705 <search_score name="spscore" value="1.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5706 <search_score name="sprank" value="4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5707 <search_score name="expect" value="2.44E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5708 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5709 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5710 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5711 <spectrum_query spectrum="201208-378803.00058.00058.3" spectrumNativeID="sample=1 period=1 cycle=1214 experiment=2" start_scan="58" end_scan="58" precursor_neutral_mass="1527.603256" assumed_charge="3" index="116" retention_time_sec="752.3">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5712 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5713 <search_hit hit_rank="1" peptide="SHSMAGGSRMMTDK" peptide_prev_aa="E" peptide_next_aa="E" protein="gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="52" calc_neutral_pep_mass="1526.627553" massdiff="0.975703" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="248">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5714 <modification_info modified_peptide="SHSMAGGSRM[147]M[147]TDK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5715 <mod_aminoacid_mass position="10" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5716 <mod_aminoacid_mass position="11" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5717 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5718 <search_score name="xcorr" value="0.651"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5719 <search_score name="deltacn" value="0.131"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5720 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5721 <search_score name="spscore" value="0.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5722 <search_score name="sprank" value="7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5723 <search_score name="expect" value="1.77E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5724 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5725 <search_hit hit_rank="2" peptide="GRSCATVNGNMSIC" peptide_prev_aa="R" peptide_next_aa="Q" protein="XXX_gi|28849955|ref|NP_788795.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="52" calc_neutral_pep_mass="1528.595615" massdiff="-0.992359" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="248">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5726 <modification_info modified_peptide="GRSCATVNGN[115]MSIC">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5727 <mod_aminoacid_mass position="4" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5728 <mod_aminoacid_mass position="10" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5729 <mod_aminoacid_mass position="14" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5730 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5731 <search_score name="xcorr" value="0.566"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5732 <search_score name="deltacn" value="0.011"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5733 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5734 <search_score name="spscore" value="1.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5735 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5736 <search_score name="expect" value="3.85E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5737 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5738 <search_hit hit_rank="3" peptide="ADLAKYICDNQDT" peptide_prev_aa="R" peptide_next_aa="I" protein="gi|30794280|ref|NP_851335.1|" num_tot_proteins="1" num_matched_ions="5" tot_num_ions="48" calc_neutral_pep_mass="1528.623921" massdiff="-1.020665" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="248">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5739 <modification_info modified_peptide="ADLAKYICDN[115]Q[129]DT">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5740 <mod_aminoacid_mass position="8" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5741 <mod_aminoacid_mass position="10" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5742 <mod_aminoacid_mass position="11" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5743 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5744 <search_score name="xcorr" value="0.560"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5745 <search_score name="deltacn" value="0.016"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5746 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5747 <search_score name="spscore" value="6.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5748 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5749 <search_score name="expect" value="4.08E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5750 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5751 <search_hit hit_rank="4" peptide="SHSMAGGSRMMTDK" peptide_prev_aa="E" peptide_next_aa="E" protein="gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="52" calc_neutral_pep_mass="1526.627553" massdiff="0.975703" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="248">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5752 <modification_info modified_peptide="SHSM[147]AGGSRMM[147]TDK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5753 <mod_aminoacid_mass position="4" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5754 <mod_aminoacid_mass position="11" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5755 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5756 <search_score name="xcorr" value="0.550"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5757 <search_score name="deltacn" value="0.007"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5758 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5759 <search_score name="spscore" value="0.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5760 <search_score name="sprank" value="25"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5761 <search_score name="expect" value="4.43E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5762 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5763 <search_hit hit_rank="5" peptide="GRSCATVNGNMSIC" peptide_prev_aa="R" peptide_next_aa="Q" protein="XXX_gi|28849955|ref|NP_788795.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="52" calc_neutral_pep_mass="1528.595615" massdiff="-0.992359" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="248">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5764 <modification_info modified_peptide="GRSCATVN[115]GNMSIC">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5765 <mod_aminoacid_mass position="4" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5766 <mod_aminoacid_mass position="8" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5767 <mod_aminoacid_mass position="14" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5768 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5769 <search_score name="xcorr" value="0.547"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5770 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5771 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5772 <search_score name="spscore" value="1.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5773 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5774 <search_score name="expect" value="4.58E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5775 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5776 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5777 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5778 <spectrum_query spectrum="201208-378803.00059.00059.2" spectrumNativeID="sample=1 period=1 cycle=1214 experiment=3" start_scan="59" end_scan="59" precursor_neutral_mass="984.394939" assumed_charge="2" index="117" retention_time_sec="754.4">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5779 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5780 <search_hit hit_rank="1" peptide="PMCKGQTF" peptide_prev_aa="K" peptide_next_aa="F" protein="XXX_gi|528993971|ref|XP_005219929.1|" num_tot_proteins="4" num_matched_ions="1" tot_num_ions="14" calc_neutral_pep_mass="985.388490" massdiff="-0.993552" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="252">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5781 <modification_info modified_peptide="PM[147]CKGQ[129]TF">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5782 <mod_aminoacid_mass position="2" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5783 <mod_aminoacid_mass position="3" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5784 <mod_aminoacid_mass position="6" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5785 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5786 <search_score name="xcorr" value="0.369"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5787 <search_score name="deltacn" value="0.195"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5788 <search_score name="deltacnstar" value="0.164"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5789 <search_score name="spscore" value="4.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5790 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5791 <search_score name="expect" value="6.58E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5792 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5793 <search_hit hit_rank="2" peptide="PMCKGQTF" peptide_prev_aa="K" peptide_next_aa="F" protein="XXX_gi|528993971|ref|XP_005219929.1|" num_tot_proteins="4" num_matched_ions="1" tot_num_ions="14" calc_neutral_pep_mass="984.404474" massdiff="-0.009536" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="252">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5794 <modification_info modified_peptide="PM[147]CKGQTF">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5795 <mod_aminoacid_mass position="2" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5796 <mod_aminoacid_mass position="3" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5797 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5798 <search_score name="xcorr" value="0.308"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5799 <search_score name="deltacn" value="0.038"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5800 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5801 <search_score name="spscore" value="4.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5802 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5803 <search_score name="expect" value="1.42E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5804 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5805 <search_hit hit_rank="3" peptide="TFNPQNSSS" peptide_prev_aa="K" peptide_next_aa="F" protein="gi|119924469|ref|XP_001252524.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="16" calc_neutral_pep_mass="981.403955" massdiff="2.990984" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="252">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5806 <modification_info modified_peptide="TFNPQN[115]SSS">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5807 <mod_aminoacid_mass position="6" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5808 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5809 <search_score name="xcorr" value="0.297"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5810 <search_score name="deltacn" value="0.207"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5811 <search_score name="deltacnstar" value="0.002"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5812 <search_score name="spscore" value="6.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5813 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5814 <search_score name="expect" value="1.65E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5815 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5816 <search_hit hit_rank="4" peptide="TFNPQNSSS" peptide_prev_aa="K" peptide_next_aa="F" protein="gi|119924469|ref|XP_001252524.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="16" calc_neutral_pep_mass="982.387971" massdiff="2.006968" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="252">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5817 <modification_info modified_peptide="TFNPQ[129]N[115]SSS">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5818 <mod_aminoacid_mass position="5" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5819 <mod_aminoacid_mass position="6" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5820 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5821 <search_score name="xcorr" value="0.296"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5822 <search_score name="deltacn" value="0.205"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5823 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5824 <search_score name="spscore" value="6.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5825 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5826 <search_score name="expect" value="1.66E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5827 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5828 <search_hit hit_rank="5" peptide="MMEQQATK" peptide_prev_aa="T" peptide_next_aa="P" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="0" tot_num_ions="14" calc_neutral_pep_mass="983.393970" massdiff="1.000969" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="252">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5829 <modification_info modified_peptide="MM[147]EQ[129]Q[129]ATK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5830 <mod_aminoacid_mass position="2" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5831 <mod_aminoacid_mass position="4" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5832 <mod_aminoacid_mass position="5" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5833 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5834 <search_score name="xcorr" value="0.235"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5835 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5836 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5837 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5838 <search_score name="sprank" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5839 <search_score name="expect" value="3.60E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5840 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5841 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5842 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5843 <spectrum_query spectrum="201208-378803.00059.00059.3" spectrumNativeID="sample=1 period=1 cycle=1214 experiment=3" start_scan="59" end_scan="59" precursor_neutral_mass="1476.592408" assumed_charge="3" index="118" retention_time_sec="754.4">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5844 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5845 <search_hit hit_rank="1" peptide="SGLDGTMWDYDAK" peptide_prev_aa="L" peptide_next_aa="A" protein="XXX_gi|528968108|ref|XP_005212569.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="48" calc_neutral_pep_mass="1473.608195" massdiff="2.984213" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="198">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5846 <modification_info modified_peptide="SGLDGTM[147]WDYDAK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5847 <mod_aminoacid_mass position="7" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5848 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5849 <search_score name="xcorr" value="0.453"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5850 <search_score name="deltacn" value="0.165"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5851 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5852 <search_score name="spscore" value="3.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5853 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5854 <search_score name="expect" value="7.19E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5855 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5856 <search_hit hit_rank="2" peptide="PQSGGGEASGGGEAGQAG" peptide_prev_aa="R" peptide_next_aa="P" protein="gi|528961840|ref|XP_005211303.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="68" calc_neutral_pep_mass="1474.580810" massdiff="2.011598" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="198">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5857 <modification_info modified_peptide="PQ[129]SGGGEASGGGEAGQ[129]AG">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5858 <mod_aminoacid_mass position="2" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5859 <mod_aminoacid_mass position="16" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5860 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5861 <search_score name="xcorr" value="0.378"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5862 <search_score name="deltacn" value="0.015"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5863 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5864 <search_score name="spscore" value="0.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5865 <search_score name="sprank" value="19"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5866 <search_score name="expect" value="1.61E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5867 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5868 <search_hit hit_rank="3" peptide="DMVTQFMETADST" peptide_prev_aa="R" peptide_next_aa="T" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="48" calc_neutral_pep_mass="1474.595596" massdiff="1.996812" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="198">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5869 <search_score name="xcorr" value="0.372"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5870 <search_score name="deltacn" value="0.119"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5871 <search_score name="deltacnstar" value="0.015"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5872 <search_score name="spscore" value="1.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5873 <search_score name="sprank" value="8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5874 <search_score name="expect" value="1.71E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5875 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5876 <search_hit hit_rank="4" peptide="DMVTQFMETADST" peptide_prev_aa="R" peptide_next_aa="T" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="48" calc_neutral_pep_mass="1475.579612" massdiff="1.012796" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="198">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5877 <modification_info modified_peptide="DMVTQ[129]FMETADST">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5878 <mod_aminoacid_mass position="5" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5879 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5880 <search_score name="xcorr" value="0.367"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5881 <search_score name="deltacn" value="0.106"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5882 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5883 <search_score name="spscore" value="1.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5884 <search_score name="sprank" value="8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5885 <search_score name="expect" value="1.82E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5886 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5887 <search_hit hit_rank="5" peptide="DEMNNAWENLNK" peptide_prev_aa="I" peptide_next_aa="T" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="44" calc_neutral_pep_mass="1477.614358" massdiff="-1.021950" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="198">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5888 <modification_info modified_peptide="DEMNNAWEN[115]LNK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5889 <mod_aminoacid_mass position="9" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5890 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5891 <search_score name="xcorr" value="0.328"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5892 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5893 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5894 <search_score name="spscore" value="1.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5895 <search_score name="sprank" value="9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5896 <search_score name="expect" value="2.76E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5897 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5898 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5899 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5900 <spectrum_query spectrum="201208-378803.00060.00060.3" spectrumNativeID="sample=1 period=1 cycle=1214 experiment=4" start_scan="60" end_scan="60" precursor_neutral_mass="1634.640815" assumed_charge="3" index="119" retention_time_sec="756.5">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5901 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5902 <search_hit hit_rank="1" peptide="QSFGLSQEEYGFDGA" peptide_prev_aa="K" peptide_next_aa="P" protein="gi|28849955|ref|NP_788795.1|" num_tot_proteins="2" num_matched_ions="2" tot_num_ions="56" calc_neutral_pep_mass="1635.657663" massdiff="-1.016848" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="96">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5903 <modification_info modified_peptide="Q[129]SFGLSQ[129]EEYGFDGA">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5904 <mod_aminoacid_mass position="1" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5905 <mod_aminoacid_mass position="7" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5906 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5907 <search_score name="xcorr" value="0.988"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5908 <search_score name="deltacn" value="0.004"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5909 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5910 <search_score name="spscore" value="2.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5911 <search_score name="sprank" value="9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5912 <search_score name="expect" value="1.00E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5913 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5914 <search_hit hit_rank="2" peptide="TSPYSSNDGTSDFEK" peptide_prev_aa="L" peptide_next_aa="P" protein="gi|528928354|ref|XP_005193233.1|" num_tot_proteins="1" num_matched_ions="4" tot_num_ions="56" calc_neutral_pep_mass="1634.658391" massdiff="-0.017576" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="96">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5915 <modification_info modified_peptide="TSPYSSN[115]DGTSDFEK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5916 <mod_aminoacid_mass position="7" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5917 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5918 <search_score name="xcorr" value="0.985"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5919 <search_score name="deltacn" value="0.327"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5920 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5921 <search_score name="spscore" value="11.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5922 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5923 <search_score name="expect" value="1.00E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5924 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5925 <search_hit hit_rank="3" peptide="EFDSTGDNSSYPSTK" peptide_prev_aa="L" peptide_next_aa="P" protein="XXX_gi|528928354|ref|XP_005193233.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="56" calc_neutral_pep_mass="1634.658391" massdiff="-0.017576" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="96">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5926 <modification_info modified_peptide="EFDSTGDN[115]SSYPSTK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5927 <mod_aminoacid_mass position="8" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5928 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5929 <search_score name="xcorr" value="0.662"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5930 <search_score name="deltacn" value="0.003"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5931 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5932 <search_score name="spscore" value="2.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5933 <search_score name="sprank" value="10"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5934 <search_score name="expect" value="8.41E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5935 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5936 <search_hit hit_rank="4" peptide="YFTSDSGSVSGENER" peptide_prev_aa="L" peptide_next_aa="Q" protein="XXX_gi|358418103|ref|XP_600387.4|" num_tot_proteins="4" num_matched_ions="4" tot_num_ions="56" calc_neutral_pep_mass="1634.669625" massdiff="-0.028810" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="96">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5937 <modification_info modified_peptide="YFTSDSGSVSGEN[115]ER">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5938 <mod_aminoacid_mass position="13" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5939 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5940 <search_score name="xcorr" value="0.660"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5941 <search_score name="deltacn" value="0.219"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5942 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5943 <search_score name="spscore" value="8.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5944 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5945 <search_score name="expect" value="8.52E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5946 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5947 <search_hit hit_rank="5" peptide="SFDYGLGCAASGNCR" peptide_prev_aa="N" peptide_next_aa="C" protein="XXX_gi|358414198|ref|XP_002700672.2|" num_tot_proteins="4" num_matched_ions="3" tot_num_ions="56" calc_neutral_pep_mass="1635.629358" massdiff="-0.988543" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="96">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5948 <modification_info modified_peptide="SFDYGLGCAASGNCR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5949 <mod_aminoacid_mass position="8" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5950 <mod_aminoacid_mass position="14" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5951 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5952 <search_score name="xcorr" value="0.516"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5953 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5954 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5955 <search_score name="spscore" value="4.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5956 <search_score name="sprank" value="7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5957 <search_score name="expect" value="2.31E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5958 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5959 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5960 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5961 <spectrum_query spectrum="201208-378803.00060.00060.2" spectrumNativeID="sample=1 period=1 cycle=1214 experiment=4" start_scan="60" end_scan="60" precursor_neutral_mass="1089.760543" assumed_charge="2" index="120" retention_time_sec="756.5">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5962 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5963 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5964 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5965 <spectrum_query spectrum="201208-378803.00061.00061.2" spectrumNativeID="sample=1 period=1 cycle=1214 experiment=5" start_scan="61" end_scan="61" precursor_neutral_mass="1037.303554" assumed_charge="2" index="121" retention_time_sec="758.6">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5966 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5967 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5968 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5969 <spectrum_query spectrum="201208-378803.00061.00061.3" spectrumNativeID="sample=1 period=1 cycle=1214 experiment=5" start_scan="61" end_scan="61" precursor_neutral_mass="1555.955330" assumed_charge="3" index="122" retention_time_sec="758.6">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5970 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5971 <search_hit hit_rank="1" peptide="KGDLVRSPTLSLLR" peptide_prev_aa="S" peptide_next_aa="I" protein="XXX_gi|528961840|ref|XP_005211303.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="52" calc_neutral_pep_mass="1553.925326" massdiff="2.030004" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="36">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5972 <search_score name="xcorr" value="0.453"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5973 <search_score name="deltacn" value="0.092"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5974 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5975 <search_score name="spscore" value="5.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5976 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5977 <search_score name="expect" value="7.64E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5978 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5979 <search_hit hit_rank="2" peptide="ALVLIDELQKQRK" peptide_prev_aa="A" peptide_next_aa="Q" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="0" tot_num_ions="48" calc_neutral_pep_mass="1552.930077" massdiff="3.025253" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="36">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5980 <search_score name="xcorr" value="0.411"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5981 <search_score name="deltacn" value="0.018"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5982 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5983 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5984 <search_score name="sprank" value="7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5985 <search_score name="expect" value="1.19E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5986 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5987 <search_hit hit_rank="3" peptide="RQKQLEDILVLAK" peptide_prev_aa="A" peptide_next_aa="Q" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="48" calc_neutral_pep_mass="1552.930077" massdiff="3.025253" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="36">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5988 <search_score name="xcorr" value="0.404"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5989 <search_score name="deltacn" value="0.066"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5990 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5991 <search_score name="spscore" value="0.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5992 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5993 <search_score name="expect" value="1.28E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5994 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5995 <search_hit hit_rank="4" peptide="LAQIKNLFLRVDK" peptide_prev_aa="E" peptide_next_aa="L" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="0" tot_num_ions="48" calc_neutral_pep_mass="1556.940248" massdiff="-0.984917" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="36">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5996 <search_score name="xcorr" value="0.377"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5997 <search_score name="deltacn" value="0.046"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5998 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
5999 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6000 <search_score name="sprank" value="7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6001 <search_score name="expect" value="1.71E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6002 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6003 <search_hit hit_rank="5" peptide="LSVMGGALQKVPLLK" peptide_prev_aa="K" peptide_next_aa="S" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="0" tot_num_ions="56" calc_neutral_pep_mass="1552.937471" massdiff="3.017860" num_tol_term="2" num_missed_cleavages="1" num_matched_peptides="36">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6004 <search_score name="xcorr" value="0.360"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6005 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6006 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6007 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6008 <search_score name="sprank" value="7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6009 <search_score name="expect" value="2.05E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6010 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6011 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6012 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6013 <spectrum_query spectrum="201208-378803.00062.00062.2" spectrumNativeID="sample=1 period=1 cycle=1215 experiment=2" start_scan="62" end_scan="62" precursor_neutral_mass="1209.606506" assumed_charge="2" index="123" retention_time_sec="761.3">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6014 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6015 <search_hit hit_rank="1" peptide="ARHQELLSQQ" peptide_prev_aa="K" peptide_next_aa="Q" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="18" calc_neutral_pep_mass="1210.594216" massdiff="-0.987710" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="832">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6016 <modification_info modified_peptide="ARHQ[129]ELLSQ[129]Q">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6017 <mod_aminoacid_mass position="4" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6018 <mod_aminoacid_mass position="9" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6019 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6020 <search_score name="xcorr" value="0.650"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6021 <search_score name="deltacn" value="0.219"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6022 <search_score name="deltacnstar" value="0.039"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6023 <search_score name="spscore" value="7.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6024 <search_score name="sprank" value="4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6025 <search_score name="expect" value="4.90E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6026 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6027 <search_hit hit_rank="2" peptide="ARHQELLSQQ" peptide_prev_aa="K" peptide_next_aa="Q" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="18" calc_neutral_pep_mass="1209.610200" massdiff="-0.003694" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="832">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6028 <modification_info modified_peptide="ARHQELLSQ[129]Q">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6029 <mod_aminoacid_mass position="9" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6030 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6031 <search_score name="xcorr" value="0.625"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6032 <search_score name="deltacn" value="0.188"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6033 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6034 <search_score name="spscore" value="7.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6035 <search_score name="sprank" value="4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6036 <search_score name="expect" value="6.13E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6037 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6038 <search_hit hit_rank="3" peptide="QIHKQEVSNK" peptide_prev_aa="P" peptide_next_aa="E" protein="XXX_gi|528953236|ref|XP_005208081.1|" num_tot_proteins="4" num_matched_ions="3" tot_num_ions="18" calc_neutral_pep_mass="1210.630601" massdiff="-1.024095" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="832">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6039 <modification_info modified_peptide="Q[129]IHKQEVSNK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6040 <mod_aminoacid_mass position="1" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6041 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6042 <search_score name="xcorr" value="0.508"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6043 <search_score name="deltacn" value="0.036"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6044 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6045 <search_score name="spscore" value="10.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6046 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6047 <search_score name="expect" value="1.73E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6048 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6049 <search_hit hit_rank="4" peptide="TGTRVMAIMSAG" peptide_prev_aa="R" peptide_next_aa="N" protein="gi|528920173|ref|XP_001788336.2|" num_tot_proteins="2" num_matched_ions="3" tot_num_ions="22" calc_neutral_pep_mass="1209.584564" massdiff="0.021942" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="832">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6050 <modification_info modified_peptide="TGTRVM[147]AIMSAG">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6051 <mod_aminoacid_mass position="6" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6052 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6053 <search_score name="xcorr" value="0.489"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6054 <search_score name="deltacn" value="0.024"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6055 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6056 <search_score name="spscore" value="10.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6057 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6058 <search_score name="expect" value="2.03E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6059 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6060 <search_hit hit_rank="5" peptide="ARHQELLSQQ" peptide_prev_aa="K" peptide_next_aa="Q" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="18" calc_neutral_pep_mass="1210.594216" massdiff="-0.987710" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="832">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6061 <modification_info modified_peptide="ARHQ[129]ELLSQQ[129]">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6062 <mod_aminoacid_mass position="4" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6063 <mod_aminoacid_mass position="10" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6064 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6065 <search_score name="xcorr" value="0.478"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6066 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6067 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6068 <search_score name="spscore" value="1.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6069 <search_score name="sprank" value="19"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6070 <search_score name="expect" value="2.25E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6071 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6072 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6073 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6074 <spectrum_query spectrum="201208-378803.00062.00062.3" spectrumNativeID="sample=1 period=1 cycle=1215 experiment=2" start_scan="62" end_scan="62" precursor_neutral_mass="1814.409759" assumed_charge="3" index="124" retention_time_sec="761.3">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6075 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6076 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6077 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6078 <spectrum_query spectrum="201208-378803.00063.00063.3" spectrumNativeID="sample=1 period=1 cycle=1215 experiment=3" start_scan="63" end_scan="63" precursor_neutral_mass="1838.321311" assumed_charge="3" index="125" retention_time_sec="763.4">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6079 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6080 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6081 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6082 <spectrum_query spectrum="201208-378803.00063.00063.2" spectrumNativeID="sample=1 period=1 cycle=1215 experiment=3" start_scan="63" end_scan="63" precursor_neutral_mass="1225.547541" assumed_charge="2" index="126" retention_time_sec="763.4">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6083 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6084 <search_hit hit_rank="1" peptide="QVSHYRFCK" peptide_prev_aa="P" peptide_next_aa="V" protein="gi|528968108|ref|XP_005212569.1|" num_tot_proteins="4" num_matched_ions="1" tot_num_ions="16" calc_neutral_pep_mass="1225.554994" massdiff="-0.007453" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="786">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6085 <modification_info modified_peptide="Q[129]VSHYRFCK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6086 <mod_aminoacid_mass position="1" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6087 <mod_aminoacid_mass position="8" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6088 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6089 <search_score name="xcorr" value="0.348"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6090 <search_score name="deltacn" value="0.008"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6091 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6092 <search_score name="spscore" value="2.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6093 <search_score name="sprank" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6094 <search_score name="expect" value="4.51E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6095 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6096 <search_hit hit_rank="2" peptide="EKTGNTSSDQR" peptide_prev_aa="L" peptide_next_aa="N" protein="XXX_gi|358418103|ref|XP_600387.4|" num_tot_proteins="4" num_matched_ions="0" tot_num_ions="20" calc_neutral_pep_mass="1223.526590" massdiff="2.020951" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="786">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6097 <modification_info modified_peptide="EKTGN[115]TSSDQ[129]R">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6098 <mod_aminoacid_mass position="5" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6099 <mod_aminoacid_mass position="10" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6100 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6101 <search_score name="xcorr" value="0.346"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6102 <search_score name="deltacn" value="0.068"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6103 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6104 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6105 <search_score name="sprank" value="15"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6106 <search_score name="expect" value="4.63E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6107 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6108 <search_hit hit_rank="3" peptide="DVYRVCEQR" peptide_prev_aa="A" peptide_next_aa="L" protein="gi|528908812|ref|XP_609847.5|" num_tot_proteins="12" num_matched_ions="1" tot_num_ions="16" calc_neutral_pep_mass="1224.555722" massdiff="0.991819" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="786">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6109 <modification_info modified_peptide="DVYRVCEQR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6110 <mod_aminoacid_mass position="6" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6111 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6112 <search_score name="xcorr" value="0.322"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6113 <search_score name="deltacn" value="0.014"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6114 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6115 <search_score name="spscore" value="1.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6116 <search_score name="sprank" value="8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6117 <search_score name="expect" value="5.76E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6118 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6119 <search_hit hit_rank="4" peptide="ENKSFNQEPK" peptide_prev_aa="Q" peptide_next_aa="K" protein="XXX_gi|139948503|ref|NP_001077142.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="18" calc_neutral_pep_mass="1222.535364" massdiff="3.012177" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="786">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6120 <modification_info modified_peptide="EN[115]KSFN[115]Q[129]EPK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6121 <mod_aminoacid_mass position="2" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6122 <mod_aminoacid_mass position="6" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6123 <mod_aminoacid_mass position="7" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6124 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6125 <search_score name="xcorr" value="0.318"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6126 <search_score name="deltacn" value="0.005"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6127 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6128 <search_score name="spscore" value="1.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6129 <search_score name="sprank" value="10"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6130 <search_score name="expect" value="6.00E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6131 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6132 <search_hit hit_rank="5" peptide="QLLEQYQTSD" peptide_prev_aa="K" peptide_next_aa="L" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="18" calc_neutral_pep_mass="1224.551013" massdiff="0.996528" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="786">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6133 <modification_info modified_peptide="QLLEQ[129]YQTSD">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6134 <mod_aminoacid_mass position="5" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6135 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6136 <search_score name="xcorr" value="0.316"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6137 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6138 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6139 <search_score name="spscore" value="7.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6140 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6141 <search_score name="expect" value="6.10E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6142 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6143 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6144 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6145 <spectrum_query spectrum="201208-378803.00064.00064.3" spectrumNativeID="sample=1 period=1 cycle=1215 experiment=4" start_scan="64" end_scan="64" precursor_neutral_mass="2020.037560" assumed_charge="3" index="127" retention_time_sec="765.5">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6146 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6147 <search_hit hit_rank="1" peptide="TQADLQQLRADLDAVSMK" peptide_prev_aa="H" peptide_next_aa="C" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="68" calc_neutral_pep_mass="2018.994256" massdiff="1.043305" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1558">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6148 <modification_info modified_peptide="TQ[129]ADLQQLRADLDAVSM[147]K">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6149 <mod_aminoacid_mass position="2" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6150 <mod_aminoacid_mass position="17" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6151 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6152 <search_score name="xcorr" value="0.846"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6153 <search_score name="deltacn" value="0.336"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6154 <search_score name="deltacnstar" value="0.271"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6155 <search_score name="spscore" value="6.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6156 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6157 <search_score name="expect" value="9.47E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6158 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6159 <search_hit hit_rank="2" peptide="TQADLQQLRADLDAVSMK" peptide_prev_aa="H" peptide_next_aa="C" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="68" calc_neutral_pep_mass="2018.010240" massdiff="2.027321" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1558">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6160 <modification_info modified_peptide="TQADLQQLRADLDAVSM[147]K">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6161 <mod_aminoacid_mass position="17" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6162 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6163 <search_score name="xcorr" value="0.616"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6164 <search_score name="deltacn" value="0.090"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6165 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6166 <search_score name="spscore" value="3.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6167 <search_score name="sprank" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6168 <search_score name="expect" value="4.35E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6169 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6170 <search_hit hit_rank="3" peptide="CIASPLSTLQNRSLNLTK" peptide_prev_aa="E" peptide_next_aa="L" protein="XXX_gi|528921178|ref|XP_592304.7|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="68" calc_neutral_pep_mass="2017.051392" massdiff="2.986168" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1558">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6171 <modification_info modified_peptide="CIASPLSTLQ[129]NRSLNLTK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6172 <mod_aminoacid_mass position="1" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6173 <mod_aminoacid_mass position="10" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6174 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6175 <search_score name="xcorr" value="0.561"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6176 <search_score name="deltacn" value="0.002"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6177 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6178 <search_score name="spscore" value="0.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6179 <search_score name="sprank" value="16"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6180 <search_score name="expect" value="6.27E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6181 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6182 <search_hit hit_rank="4" peptide="CIASPLSTLQNRSLNLTK" peptide_prev_aa="E" peptide_next_aa="L" protein="XXX_gi|528921178|ref|XP_592304.7|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="68" calc_neutral_pep_mass="2017.051392" massdiff="2.986168" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1558">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6183 <modification_info modified_peptide="CIASPLSTLQN[115]RSLNLTK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6184 <mod_aminoacid_mass position="1" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6185 <mod_aminoacid_mass position="11" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6186 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6187 <search_score name="xcorr" value="0.561"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6188 <search_score name="deltacn" value="0.002"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6189 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6190 <search_score name="spscore" value="0.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6191 <search_score name="sprank" value="16"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6192 <search_score name="expect" value="6.27E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6193 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6194 <search_hit hit_rank="5" peptide="ISDQLNRLFSELDRADK" peptide_prev_aa="S" peptide_next_aa="R" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="64" calc_neutral_pep_mass="2021.006550" massdiff="-0.968990" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="1558">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6195 <modification_info modified_peptide="ISDQ[129]LN[115]RLFSELDRADK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6196 <mod_aminoacid_mass position="4" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6197 <mod_aminoacid_mass position="6" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6198 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6199 <search_score name="xcorr" value="0.560"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6200 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6201 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6202 <search_score name="spscore" value="0.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6203 <search_score name="sprank" value="12"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6204 <search_score name="expect" value="6.33E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6205 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6206 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6207 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6208 <spectrum_query spectrum="201208-378803.00064.00064.2" spectrumNativeID="sample=1 period=1 cycle=1215 experiment=4" start_scan="64" end_scan="64" precursor_neutral_mass="1346.691707" assumed_charge="2" index="128" retention_time_sec="765.5">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6209 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6210 <search_hit hit_rank="1" peptide="KCAVVDVPFGGAK" peptide_prev_aa="Y" peptide_next_aa="A" protein="gi|32880221|ref|NP_872593.1|" num_tot_proteins="1" num_matched_ions="3" tot_num_ions="24" calc_neutral_pep_mass="1347.685673" massdiff="-0.993966" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1364">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6211 <modification_info modified_peptide="KCAVVDVPFGGAK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6212 <mod_aminoacid_mass position="2" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6213 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6214 <search_score name="xcorr" value="0.905"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6215 <search_score name="deltacn" value="0.296"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6216 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6217 <search_score name="spscore" value="23.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6218 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6219 <search_score name="expect" value="1.71E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6220 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6221 <search_hit hit_rank="2" peptide="KENKSFNQEPK" peptide_prev_aa="Q" peptide_next_aa="D" protein="XXX_gi|139948503|ref|NP_001077142.1|" num_tot_proteins="1" num_matched_ions="3" tot_num_ions="20" calc_neutral_pep_mass="1347.678279" massdiff="-0.986572" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="1364">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6222 <search_score name="xcorr" value="0.637"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6223 <search_score name="deltacn" value="0.126"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6224 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6225 <search_score name="spscore" value="15.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6226 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6227 <search_score name="expect" value="1.37E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6228 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6229 <search_hit hit_rank="3" peptide="REEMKSSVVHK" peptide_prev_aa="W" peptide_next_aa="S" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="20" calc_neutral_pep_mass="1344.681969" massdiff="2.009737" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="1364">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6230 <modification_info modified_peptide="REEM[147]KSSVVHK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6231 <mod_aminoacid_mass position="4" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6232 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6233 <search_score name="xcorr" value="0.556"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6234 <search_score name="deltacn" value="0.001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6235 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6236 <search_score name="spscore" value="1.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6237 <search_score name="sprank" value="16"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6238 <search_score name="expect" value="2.56E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6239 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6240 <search_hit hit_rank="4" peptide="WLDDKQSQQAK" peptide_prev_aa="T" peptide_next_aa="N" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="20" calc_neutral_pep_mass="1345.662629" massdiff="1.029078" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1364">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6241 <search_score name="xcorr" value="0.556"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6242 <search_score name="deltacn" value="0.196"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6243 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6244 <search_score name="spscore" value="1.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6245 <search_score name="sprank" value="16"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6246 <search_score name="expect" value="2.58E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6247 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6248 <search_hit hit_rank="5" peptide="QLDFDGLPSGIGK" peptide_prev_aa="N" peptide_next_aa="L" protein="gi|528921178|ref|XP_592304.7|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="24" calc_neutral_pep_mass="1345.687781" massdiff="1.003926" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="1364">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6249 <search_score name="xcorr" value="0.447"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6250 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6251 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6252 <search_score name="spscore" value="1.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6253 <search_score name="sprank" value="18"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6254 <search_score name="expect" value="6.01E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6255 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6256 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6257 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6258 <spectrum_query spectrum="201208-378803.00065.00065.3" spectrumNativeID="sample=1 period=1 cycle=1216 experiment=2" start_scan="65" end_scan="65" precursor_neutral_mass="1389.623976" assumed_charge="3" index="129" retention_time_sec="768.2">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6259 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6260 <search_hit hit_rank="1" peptide="EAPQSHAILMEM" peptide_prev_aa="K" peptide_next_aa="S" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="44" calc_neutral_pep_mass="1388.595174" massdiff="1.028802" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="502">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6261 <modification_info modified_peptide="EAPQ[129]SHAILM[147]EM[147]">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6262 <mod_aminoacid_mass position="4" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6263 <mod_aminoacid_mass position="10" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6264 <mod_aminoacid_mass position="12" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6265 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6266 <search_score name="xcorr" value="0.511"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6267 <search_score name="deltacn" value="0.147"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6268 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6269 <search_score name="spscore" value="0.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6270 <search_score name="sprank" value="23"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6271 <search_score name="expect" value="6.57E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6272 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6273 <search_hit hit_rank="2" peptide="ENQGGIISEVQES" peptide_prev_aa="R" peptide_next_aa="N" protein="gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="3" tot_num_ions="48" calc_neutral_pep_mass="1390.609985" massdiff="-0.986009" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="502">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6274 <modification_info modified_peptide="EN[115]Q[129]GGIISEVQES">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6275 <mod_aminoacid_mass position="2" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6276 <mod_aminoacid_mass position="3" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6277 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6278 <search_score name="xcorr" value="0.435"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6279 <search_score name="deltacn" value="0.008"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6280 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6281 <search_score name="spscore" value="1.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6282 <search_score name="sprank" value="6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6283 <search_score name="expect" value="1.42E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6284 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6285 <search_hit hit_rank="3" peptide="LPEGASQGMTPFR" peptide_prev_aa="I" peptide_next_aa="S" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="48" calc_neutral_pep_mass="1390.655101" massdiff="-1.031125" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="502">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6286 <modification_info modified_peptide="LPEGASQ[129]GMTPFR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6287 <mod_aminoacid_mass position="7" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6288 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6289 <search_score name="xcorr" value="0.432"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6290 <search_score name="deltacn" value="0.003"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6291 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6292 <search_score name="spscore" value="1.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6293 <search_score name="sprank" value="15"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6294 <search_score name="expect" value="1.47E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6295 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6296 <search_hit hit_rank="4" peptide="KEECNLAGNQIL" peptide_prev_aa="K" peptide_next_aa="T" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="44" calc_neutral_pep_mass="1390.628613" massdiff="-1.004637" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="502">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6297 <modification_info modified_peptide="KEECN[115]LAGN[115]QIL">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6298 <mod_aminoacid_mass position="4" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6299 <mod_aminoacid_mass position="5" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6300 <mod_aminoacid_mass position="9" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6301 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6302 <search_score name="xcorr" value="0.431"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6303 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6304 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6305 <search_score name="spscore" value="1.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6306 <search_score name="sprank" value="16"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6307 <search_score name="expect" value="1.49E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6308 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6309 <search_hit hit_rank="5" peptide="KEECNLAGNQIL" peptide_prev_aa="K" peptide_next_aa="T" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="44" calc_neutral_pep_mass="1390.628613" massdiff="-1.004637" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="502">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6310 <modification_info modified_peptide="KEECN[115]LAGNQ[129]IL">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6311 <mod_aminoacid_mass position="4" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6312 <mod_aminoacid_mass position="5" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6313 <mod_aminoacid_mass position="10" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6314 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6315 <search_score name="xcorr" value="0.431"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6316 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6317 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6318 <search_score name="spscore" value="1.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6319 <search_score name="sprank" value="16"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6320 <search_score name="expect" value="1.49E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6321 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6322 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6323 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6324 <spectrum_query spectrum="201208-378803.00065.00065.2" spectrumNativeID="sample=1 period=1 cycle=1216 experiment=2" start_scan="65" end_scan="65" precursor_neutral_mass="926.415984" assumed_charge="2" index="130" retention_time_sec="768.2">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6325 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6326 <search_hit hit_rank="1" peptide="PQNSSSFR" peptide_prev_aa="N" peptide_next_aa="E" protein="gi|119924469|ref|XP_001252524.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="14" calc_neutral_pep_mass="923.398476" massdiff="3.017508" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="370">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6327 <modification_info modified_peptide="PQ[129]N[115]SSSFR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6328 <mod_aminoacid_mass position="2" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6329 <mod_aminoacid_mass position="3" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6330 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6331 <search_score name="xcorr" value="0.349"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6332 <search_score name="deltacn" value="0.026"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6333 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6334 <search_score name="spscore" value="1.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6335 <search_score name="sprank" value="8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6336 <search_score name="expect" value="1.47E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6337 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6338 <search_hit hit_rank="2" peptide="RTTGQFSQ" peptide_prev_aa="R" peptide_next_aa="E" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="14" calc_neutral_pep_mass="925.414126" massdiff="1.001858" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="370">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6339 <modification_info modified_peptide="RTTGQ[129]FSQ[129]">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6340 <mod_aminoacid_mass position="5" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6341 <mod_aminoacid_mass position="8" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6342 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6343 <search_score name="xcorr" value="0.340"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6344 <search_score name="deltacn" value="0.079"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6345 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6346 <search_score name="spscore" value="2.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6347 <search_score name="sprank" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6348 <search_score name="expect" value="1.65E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6349 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6350 <search_hit hit_rank="3" peptide="DQDPIPQN" peptide_prev_aa="R" peptide_next_aa="I" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="14" calc_neutral_pep_mass="925.414125" massdiff="1.001859" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="370">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6351 <search_score name="xcorr" value="0.313"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6352 <search_score name="deltacn" value="0.006"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6353 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6354 <search_score name="spscore" value="3.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6355 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6356 <search_score name="expect" value="2.27E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6357 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6358 <search_hit hit_rank="4" peptide="ISSSSDSRS" peptide_prev_aa="K" peptide_next_aa="S" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="16" calc_neutral_pep_mass="924.414853" massdiff="2.001130" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="370">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6359 <search_score name="xcorr" value="0.311"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6360 <search_score name="deltacn" value="0.034"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6361 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6362 <search_score name="spscore" value="3.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6363 <search_score name="sprank" value="4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6364 <search_score name="expect" value="2.32E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6365 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6366 <search_hit hit_rank="5" peptide="FMENKSR" peptide_prev_aa="Q" peptide_next_aa="L" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="12" calc_neutral_pep_mass="927.412002" massdiff="-0.996019" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="370">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6367 <modification_info modified_peptide="FM[147]EN[115]KSR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6368 <mod_aminoacid_mass position="2" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6369 <mod_aminoacid_mass position="4" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6370 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6371 <search_score name="xcorr" value="0.301"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6372 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6373 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6374 <search_score name="spscore" value="0.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6375 <search_score name="sprank" value="9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6376 <search_score name="expect" value="2.64E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6377 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6378 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6379 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6380 <spectrum_query spectrum="201208-378803.00066.00066.3" spectrumNativeID="sample=1 period=1 cycle=1216 experiment=3" start_scan="66" end_scan="66" precursor_neutral_mass="1500.587574" assumed_charge="3" index="131" retention_time_sec="770.3">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6381 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6382 <search_hit hit_rank="1" peptide="QCFGRGCEPCVK" peptide_prev_aa="F" peptide_next_aa="A" protein="XXX_gi|528908812|ref|XP_609847.5|" num_tot_proteins="12" num_matched_ions="2" tot_num_ions="44" calc_neutral_pep_mass="1500.568338" massdiff="0.019235" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="214">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6383 <modification_info modified_peptide="Q[129]CFGRGCEPCVK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6384 <mod_aminoacid_mass position="1" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6385 <mod_aminoacid_mass position="2" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6386 <mod_aminoacid_mass position="7" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6387 <mod_aminoacid_mass position="10" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6388 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6389 <search_score name="xcorr" value="0.333"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6390 <search_score name="deltacn" value="0.013"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6391 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6392 <search_score name="spscore" value="1.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6393 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6394 <search_score name="expect" value="1.43E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6395 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6396 <search_hit hit_rank="2" peptide="SESTEDQAMEDIK" peptide_prev_aa="G" peptide_next_aa="Q" protein="gi|528953234|ref|XP_005208080.1|" num_tot_proteins="6" num_matched_ions="1" tot_num_ions="48" calc_neutral_pep_mass="1498.598085" massdiff="1.989489" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="214">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6397 <modification_info modified_peptide="SESTEDQ[129]AM[147]EDIK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6398 <mod_aminoacid_mass position="7" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6399 <mod_aminoacid_mass position="9" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6400 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6401 <search_score name="xcorr" value="0.329"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6402 <search_score name="deltacn" value="0.186"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6403 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6404 <search_score name="spscore" value="0.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6405 <search_score name="sprank" value="12"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6406 <search_score name="expect" value="1.51E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6407 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6408 <search_hit hit_rank="3" peptide="QCFGRGCEPCVK" peptide_prev_aa="F" peptide_next_aa="A" protein="XXX_gi|528908812|ref|XP_609847.5|" num_tot_proteins="12" num_matched_ions="1" tot_num_ions="44" calc_neutral_pep_mass="1499.584322" massdiff="1.003251" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="214">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6409 <modification_info modified_peptide="QCFGRGCEPCVK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6410 <mod_aminoacid_mass position="2" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6411 <mod_aminoacid_mass position="7" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6412 <mod_aminoacid_mass position="10" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6413 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6414 <search_score name="xcorr" value="0.268"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6415 <search_score name="deltacn" value="0.155"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6416 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6417 <search_score name="spscore" value="0.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6418 <search_score name="sprank" value="7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6419 <search_score name="expect" value="3.34E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6420 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6421 <search_hit hit_rank="4" peptide="DSWDYALEEEEN" peptide_prev_aa="K" peptide_next_aa="N" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="44" calc_neutral_pep_mass="1498.573599" massdiff="2.013975" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="214">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6422 <search_score name="xcorr" value="0.226"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6423 <search_score name="deltacn" value="0.090"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6424 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6425 <search_score name="spscore" value="0.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6426 <search_score name="sprank" value="6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6427 <search_score name="expect" value="5.70E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6428 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6429 <search_hit hit_rank="5" peptide="MNMFRGFFDSQT" peptide_prev_aa="K" peptide_next_aa="C" protein="gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="44" calc_neutral_pep_mass="1497.590438" massdiff="2.997136" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="214">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6430 <modification_info modified_peptide="M[147]N[115]MFRGFFDSQ[129]T">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6431 <mod_aminoacid_mass position="1" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6432 <mod_aminoacid_mass position="2" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6433 <mod_aminoacid_mass position="11" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6434 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6435 <search_score name="xcorr" value="0.206"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6436 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6437 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6438 <search_score name="spscore" value="1.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6439 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6440 <search_score name="expect" value="7.43E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6441 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6442 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6443 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6444 <spectrum_query spectrum="201208-378803.00066.00066.2" spectrumNativeID="sample=1 period=1 cycle=1216 experiment=3" start_scan="66" end_scan="66" precursor_neutral_mass="1000.391716" assumed_charge="2" index="132" retention_time_sec="770.3">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6445 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6446 <search_hit hit_rank="1" peptide="MFQTVMDE" peptide_prev_aa="R" peptide_next_aa="T" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="14" calc_neutral_pep_mass="1000.388170" massdiff="0.003546" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="122">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6447 <modification_info modified_peptide="MFQ[129]TVMDE">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6448 <mod_aminoacid_mass position="3" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6449 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6450 <search_score name="xcorr" value="0.350"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6451 <search_score name="deltacn" value="0.082"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6452 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6453 <search_score name="spscore" value="2.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6454 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6455 <search_score name="expect" value="3.97E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6456 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6457 <search_hit hit_rank="2" peptide="LENDTYNE" peptide_prev_aa="K" peptide_next_aa="K" protein="XXX_gi|32880221|ref|NP_872593.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="14" calc_neutral_pep_mass="998.371652" massdiff="2.020064" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="122">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6458 <modification_info modified_peptide="LEN[115]DTYN[115]E">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6459 <mod_aminoacid_mass position="3" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6460 <mod_aminoacid_mass position="7" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6461 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6462 <search_score name="xcorr" value="0.321"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6463 <search_score name="deltacn" value="0.063"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6464 <search_score name="deltacnstar" value="0.002"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6465 <search_score name="spscore" value="1.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6466 <search_score name="sprank" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6467 <search_score name="expect" value="6.19E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6468 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6469 <search_hit hit_rank="3" peptide="LENDTYNE" peptide_prev_aa="K" peptide_next_aa="K" protein="XXX_gi|32880221|ref|NP_872593.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="14" calc_neutral_pep_mass="997.387636" massdiff="3.004080" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="122">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6470 <modification_info modified_peptide="LENDTYN[115]E">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6471 <mod_aminoacid_mass position="7" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6472 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6473 <search_score name="xcorr" value="0.320"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6474 <search_score name="deltacn" value="0.061"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6475 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6476 <search_score name="spscore" value="1.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6477 <search_score name="sprank" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6478 <search_score name="expect" value="6.26E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6479 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6480 <search_hit hit_rank="4" peptide="DFHPQDNK" peptide_prev_aa="K" peptide_next_aa="S" protein="gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="14" calc_neutral_pep_mass="1001.409041" massdiff="-1.017325" num_tol_term="2" num_missed_cleavages="0" num_matched_peptides="122">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6481 <modification_info modified_peptide="DFHPQ[129]DN[115]K">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6482 <mod_aminoacid_mass position="5" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6483 <mod_aminoacid_mass position="7" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6484 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6485 <search_score name="xcorr" value="0.301"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6486 <search_score name="deltacn" value="0.029"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6487 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6488 <search_score name="spscore" value="1.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6489 <search_score name="sprank" value="4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6490 <search_score name="expect" value="8.47E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6491 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6492 <search_hit hit_rank="5" peptide="DQDILNHM" peptide_prev_aa="R" peptide_next_aa="A" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="14" calc_neutral_pep_mass="1001.412396" massdiff="-1.020681" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="122">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6493 <modification_info modified_peptide="DQ[129]DILNHM[147]">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6494 <mod_aminoacid_mass position="2" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6495 <mod_aminoacid_mass position="8" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6496 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6497 <search_score name="xcorr" value="0.292"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6498 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6499 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6500 <search_score name="spscore" value="4.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6501 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6502 <search_score name="expect" value="9.69E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6503 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6504 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6505 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6506 <spectrum_query spectrum="201208-378803.00067.00067.2" spectrumNativeID="sample=1 period=1 cycle=1216 experiment=4" start_scan="67" end_scan="67" precursor_neutral_mass="809.293500" assumed_charge="2" index="133" retention_time_sec="772.4">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6507 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6508 <search_hit hit_rank="1" peptide="NQPNFTS" peptide_prev_aa="K" peptide_next_aa="S" protein="XXX_gi|119924469|ref|XP_001252524.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="12" calc_neutral_pep_mass="809.307930" massdiff="-0.014429" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="118">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6509 <modification_info modified_peptide="N[115]Q[129]PN[115]FTS">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6510 <mod_aminoacid_mass position="1" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6511 <mod_aminoacid_mass position="2" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6512 <mod_aminoacid_mass position="4" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6513 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6514 <search_score name="xcorr" value="0.537"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6515 <search_score name="deltacn" value="0.126"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6516 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6517 <search_score name="spscore" value="9.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6518 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6519 <search_score name="expect" value="1.00E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6520 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6521 <search_hit hit_rank="2" peptide="QACEGNK" peptide_prev_aa="E" peptide_next_aa="K" protein="XXX_gi|528969819|ref|XP_005213230.1|" num_tot_proteins="2" num_matched_ions="1" tot_num_ions="12" calc_neutral_pep_mass="808.290900" massdiff="1.002601" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="118">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6522 <modification_info modified_peptide="Q[129]ACEGN[115]K">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6523 <mod_aminoacid_mass position="1" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6524 <mod_aminoacid_mass position="3" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6525 <mod_aminoacid_mass position="6" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6526 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6527 <search_score name="xcorr" value="0.469"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6528 <search_score name="deltacn" value="0.322"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6529 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6530 <search_score name="spscore" value="2.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6531 <search_score name="sprank" value="7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6532 <search_score name="expect" value="1.86E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6533 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6534 <search_hit hit_rank="3" peptide="LEECEQ" peptide_prev_aa="R" peptide_next_aa="R" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="10" calc_neutral_pep_mass="807.295650" massdiff="1.997850" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="118">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6535 <modification_info modified_peptide="LEECEQ">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6536 <mod_aminoacid_mass position="4" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6537 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6538 <search_score name="xcorr" value="0.318"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6539 <search_score name="deltacn" value="0.087"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6540 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6541 <search_score name="spscore" value="5.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6542 <search_score name="sprank" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6543 <search_score name="expect" value="1.30E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6544 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6545 <search_hit hit_rank="4" peptide="GCQQCR" peptide_prev_aa="V" peptide_next_aa="G" protein="XXX_gi|528908812|ref|XP_609847.5|" num_tot_proteins="12" num_matched_ions="1" tot_num_ions="10" calc_neutral_pep_mass="809.279624" massdiff="0.013877" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="118">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6546 <modification_info modified_peptide="GCQQCR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6547 <mod_aminoacid_mass position="2" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6548 <mod_aminoacid_mass position="5" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6549 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6550 <search_score name="xcorr" value="0.290"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6551 <search_score name="deltacn" value="0.034"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6552 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6553 <search_score name="spscore" value="6.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6554 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6555 <search_score name="expect" value="1.85E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6556 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6557 <search_hit hit_rank="5" peptide="ENTGQQE" peptide_prev_aa="K" peptide_next_aa="A" protein="gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="12" calc_neutral_pep_mass="807.277024" massdiff="2.016477" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="118">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6558 <modification_info modified_peptide="EN[115]TGQ[129]Q[129]E">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6559 <mod_aminoacid_mass position="2" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6560 <mod_aminoacid_mass position="5" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6561 <mod_aminoacid_mass position="6" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6562 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6563 <search_score name="xcorr" value="0.280"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6564 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6565 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6566 <search_score name="spscore" value="6.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6567 <search_score name="sprank" value="4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6568 <search_score name="expect" value="2.10E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6569 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6570 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6571 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6572 <spectrum_query spectrum="201208-378803.00067.00067.3" spectrumNativeID="sample=1 period=1 cycle=1216 experiment=4" start_scan="67" end_scan="67" precursor_neutral_mass="1213.940251" assumed_charge="3" index="134" retention_time_sec="772.4">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6573 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6574 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6575 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6576 <spectrum_query spectrum="201208-378803.00068.00068.2" spectrumNativeID="sample=1 period=1 cycle=1216 experiment=5" start_scan="68" end_scan="68" precursor_neutral_mass="1149.594918" assumed_charge="2" index="135" retention_time_sec="774.2">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6577 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6578 <search_hit hit_rank="1" peptide="LDGIKTRYAD" peptide_prev_aa="K" peptide_next_aa="I" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="18" calc_neutral_pep_mass="1150.598238" massdiff="-1.003319" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="648">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6579 <search_score name="xcorr" value="0.808"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6580 <search_score name="deltacn" value="0.129"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6581 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6582 <search_score name="spscore" value="19.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6583 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6584 <search_score name="expect" value="1.00E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6585 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6586 <search_hit hit_rank="2" peptide="APLTEIENYV" peptide_prev_aa="K" peptide_next_aa="G" protein="gi|358414198|ref|XP_002700672.2|" num_tot_proteins="4" num_matched_ions="3" tot_num_ions="18" calc_neutral_pep_mass="1147.576105" massdiff="2.018813" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="648">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6587 <search_score name="xcorr" value="0.704"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6588 <search_score name="deltacn" value="0.340"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6589 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6590 <search_score name="spscore" value="9.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6591 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6592 <search_score name="expect" value="1.00E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6593 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6594 <search_hit hit_rank="3" peptide="TRVLNQYEQ" peptide_prev_aa="K" peptide_next_aa="L" protein="gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="16" calc_neutral_pep_mass="1149.577836" massdiff="0.017082" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="648">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6595 <search_score name="xcorr" value="0.464"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6596 <search_score name="deltacn" value="0.070"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6597 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6598 <search_score name="spscore" value="1.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6599 <search_score name="sprank" value="11"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6600 <search_score name="expect" value="4.29E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6601 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6602 <search_hit hit_rank="4" peptide="ALQKNQSDLK" peptide_prev_aa="S" peptide_next_aa="D" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="18" calc_neutral_pep_mass="1146.576835" massdiff="3.018084" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="648">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6603 <modification_info modified_peptide="ALQ[129]KN[115]Q[129]SDLK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6604 <mod_aminoacid_mass position="3" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6605 <mod_aminoacid_mass position="5" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6606 <mod_aminoacid_mass position="6" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6607 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6608 <search_score name="xcorr" value="0.432"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6609 <search_score name="deltacn" value="0.081"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6610 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6611 <search_score name="spscore" value="0.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6612 <search_score name="sprank" value="22"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6613 <search_score name="expect" value="6.31E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6614 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6615 <search_hit hit_rank="5" peptide="IKDVSMSDLK" peptide_prev_aa="E" peptide_next_aa="D" protein="gi|528968108|ref|XP_005212569.1|" num_tot_proteins="4" num_matched_ions="1" tot_num_ions="18" calc_neutral_pep_mass="1150.590360" massdiff="-0.995442" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="648">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6616 <modification_info modified_peptide="IKDVSM[147]SDLK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6617 <mod_aminoacid_mass position="6" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6618 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6619 <search_score name="xcorr" value="0.397"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6620 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6621 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6622 <search_score name="spscore" value="4.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6623 <search_score name="sprank" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6624 <search_score name="expect" value="9.54E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6625 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6626 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6627 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6628 <spectrum_query spectrum="201208-378803.00068.00068.3" spectrumNativeID="sample=1 period=1 cycle=1216 experiment=5" start_scan="68" end_scan="68" precursor_neutral_mass="1724.392378" assumed_charge="3" index="136" retention_time_sec="774.2">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6629 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6630 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6631 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6632 <spectrum_query spectrum="201208-378803.00069.00069.3" spectrumNativeID="sample=1 period=1 cycle=1217 experiment=2" start_scan="69" end_scan="69" precursor_neutral_mass="1502.210983" assumed_charge="3" index="137" retention_time_sec="776.8">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6633 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6634 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6635 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6636 <spectrum_query spectrum="201208-378803.00069.00069.2" spectrumNativeID="sample=1 period=1 cycle=1217 experiment=2" start_scan="69" end_scan="69" precursor_neutral_mass="1001.473989" assumed_charge="2" index="138" retention_time_sec="776.8">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6637 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6638 <search_hit hit_rank="1" peptide="ASIGDGGEPVT" peptide_prev_aa="K" peptide_next_aa="E" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="3" num_matched_ions="4" tot_num_ions="20" calc_neutral_pep_mass="1001.466555" massdiff="0.007434" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="306">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6639 <search_score name="xcorr" value="0.373"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6640 <search_score name="deltacn" value="0.066"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6641 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6642 <search_score name="spscore" value="14.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6643 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6644 <search_score name="expect" value="9.37E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6645 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6646 <search_hit hit_rank="2" peptide="IEQDLQEK" peptide_prev_aa="V" peptide_next_aa="E" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="14" calc_neutral_pep_mass="1002.486956" massdiff="-1.012967" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="306">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6647 <modification_info modified_peptide="IEQ[129]DLQEK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6648 <mod_aminoacid_mass position="3" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6649 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6650 <search_score name="xcorr" value="0.349"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6651 <search_score name="deltacn" value="0.024"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6652 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6653 <search_score name="spscore" value="3.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6654 <search_score name="sprank" value="6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6655 <search_score name="expect" value="1.29E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6656 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6657 <search_hit hit_rank="3" peptide="PSDTIENVK" peptide_prev_aa="E" peptide_next_aa="A" protein="gi|528918160|ref|XP_005195085.1|" num_tot_proteins="27" num_matched_ions="1" tot_num_ions="16" calc_neutral_pep_mass="1002.486956" massdiff="-1.012967" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="306">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6658 <modification_info modified_peptide="PSDTIEN[115]VK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6659 <mod_aminoacid_mass position="7" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6660 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6661 <search_score name="xcorr" value="0.340"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6662 <search_score name="deltacn" value="0.163"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6663 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6664 <search_score name="spscore" value="1.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6665 <search_score name="sprank" value="14"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6666 <search_score name="expect" value="1.44E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6667 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6668 <search_hit hit_rank="4" peptide="VNEITDSPK" peptide_prev_aa="E" peptide_next_aa="A" protein="XXX_gi|528918160|ref|XP_005195085.1|" num_tot_proteins="27" num_matched_ions="2" tot_num_ions="16" calc_neutral_pep_mass="1002.486956" massdiff="-1.012967" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="306">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6669 <modification_info modified_peptide="VN[115]EITDSPK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6670 <mod_aminoacid_mass position="2" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6671 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6672 <search_score name="xcorr" value="0.285"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6673 <search_score name="deltacn" value="0.032"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6674 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6675 <search_score name="spscore" value="3.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6676 <search_score name="sprank" value="8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6677 <search_score name="expect" value="2.97E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6678 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6679 <search_hit hit_rank="5" peptide="VQDWPNLK" peptide_prev_aa="V" peptide_next_aa="R" protein="XXX_gi|27806963|ref|NP_776953.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="14" calc_neutral_pep_mass="1000.486563" massdiff="0.987426" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="306">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6680 <modification_info modified_peptide="VQ[129]DWPN[115]LK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6681 <mod_aminoacid_mass position="2" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6682 <mod_aminoacid_mass position="6" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6683 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6684 <search_score name="xcorr" value="0.276"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6685 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6686 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6687 <search_score name="spscore" value="4.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6688 <search_score name="sprank" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6689 <search_score name="expect" value="3.35E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6690 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6691 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6692 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6693 <spectrum_query spectrum="201208-378803.00070.00070.3" spectrumNativeID="sample=1 period=1 cycle=1217 experiment=3" start_scan="70" end_scan="70" precursor_neutral_mass="1596.754867" assumed_charge="3" index="139" retention_time_sec="778.0">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6694 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6695 <search_hit hit_rank="1" peptide="GVTEHSNQQQGRKE" peptide_prev_aa="R" peptide_next_aa="E" protein="gi|528961840|ref|XP_005211303.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="52" calc_neutral_pep_mass="1596.760445" massdiff="-0.005579" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="1120">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6696 <search_score name="xcorr" value="0.514"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6697 <search_score name="deltacn" value="0.199"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6698 <search_score name="deltacnstar" value="0.001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6699 <search_score name="spscore" value="3.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6700 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6701 <search_score name="expect" value="1.13E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6702 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6703 <search_hit hit_rank="2" peptide="GVTEHSNQQQGRKE" peptide_prev_aa="R" peptide_next_aa="E" protein="gi|528961840|ref|XP_005211303.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="52" calc_neutral_pep_mass="1597.744461" massdiff="-0.989595" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="1120">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6704 <modification_info modified_peptide="GVTEHSNQQ[129]QGRKE">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6705 <mod_aminoacid_mass position="9" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6706 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6707 <search_score name="xcorr" value="0.514"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6708 <search_score name="deltacn" value="0.198"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6709 <search_score name="deltacnstar" value="0.002"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6710 <search_score name="spscore" value="3.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6711 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6712 <search_score name="expect" value="1.13E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6713 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6714 <search_hit hit_rank="3" peptide="GVTEHSNQQQGRKE" peptide_prev_aa="R" peptide_next_aa="E" protein="gi|528961840|ref|XP_005211303.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="52" calc_neutral_pep_mass="1597.744461" massdiff="-0.989595" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="1120">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6715 <modification_info modified_peptide="GVTEHSNQQQ[129]GRKE">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6716 <mod_aminoacid_mass position="10" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6717 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6718 <search_score name="xcorr" value="0.513"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6719 <search_score name="deltacn" value="0.196"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6720 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6721 <search_score name="spscore" value="3.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6722 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6723 <search_score name="expect" value="1.14E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6724 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6725 <search_hit hit_rank="4" peptide="IVTNDLWDFMAQK" peptide_prev_aa="L" peptide_next_aa="L" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="48" calc_neutral_pep_mass="1597.733397" massdiff="-0.978530" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="1120">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6726 <modification_info modified_peptide="IVTN[115]DLWDFM[147]AQ[129]K">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6727 <mod_aminoacid_mass position="4" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6728 <mod_aminoacid_mass position="10" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6729 <mod_aminoacid_mass position="12" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6730 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6731 <search_score name="xcorr" value="0.412"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6732 <search_score name="deltacn" value="0.007"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6733 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6734 <search_score name="spscore" value="7.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6735 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6736 <search_score name="expect" value="2.90E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6737 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6738 <search_hit hit_rank="5" peptide="QESSSISEAEMQKK" peptide_prev_aa="I" peptide_next_aa="H" protein="XXX_gi|528953238|ref|XP_005208082.1|" num_tot_proteins="1" num_matched_ions="4" tot_num_ions="52" calc_neutral_pep_mass="1596.730101" massdiff="0.024765" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1120">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6739 <modification_info modified_peptide="QESSSISEAEM[147]QKK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6740 <mod_aminoacid_mass position="11" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6741 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6742 <search_score name="xcorr" value="0.409"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6743 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6744 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6745 <search_score name="spscore" value="2.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6746 <search_score name="sprank" value="8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6747 <search_score name="expect" value="2.97E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6748 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6749 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6750 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6751 <spectrum_query spectrum="201208-378803.00070.00070.2" spectrumNativeID="sample=1 period=1 cycle=1217 experiment=3" start_scan="70" end_scan="70" precursor_neutral_mass="1064.503245" assumed_charge="2" index="140" retention_time_sec="778.0">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6752 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6753 <search_hit hit_rank="1" peptide="LVETSINCK" peptide_prev_aa="L" peptide_next_aa="V" protein="XXX_gi|358418103|ref|XP_600387.4|" num_tot_proteins="4" num_matched_ions="2" tot_num_ions="16" calc_neutral_pep_mass="1064.505978" massdiff="-0.002733" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="642">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6754 <modification_info modified_peptide="LVETSIN[115]CK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6755 <mod_aminoacid_mass position="7" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6756 <mod_aminoacid_mass position="8" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6757 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6758 <search_score name="xcorr" value="0.507"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6759 <search_score name="deltacn" value="0.210"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6760 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6761 <search_score name="spscore" value="15.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6762 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6763 <search_score name="expect" value="2.16E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6764 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6765 <search_hit hit_rank="2" peptide="GLDDPKEHR" peptide_prev_aa="V" peptide_next_aa="G" protein="XXX_gi|528935739|ref|XP_005201142.1|" num_tot_proteins="2" num_matched_ions="2" tot_num_ions="16" calc_neutral_pep_mass="1065.520322" massdiff="-1.017077" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="642">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6766 <search_score name="xcorr" value="0.401"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6767 <search_score name="deltacn" value="0.326"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6768 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6769 <search_score name="spscore" value="7.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6770 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6771 <search_score name="expect" value="6.87E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6772 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6773 <search_hit hit_rank="3" peptide="EPAENLGAHK" peptide_prev_aa="G" peptide_next_aa="L" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="18" calc_neutral_pep_mass="1065.509089" massdiff="-1.005844" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="642">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6774 <modification_info modified_peptide="EPAEN[115]LGAHK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6775 <mod_aminoacid_mass position="5" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6776 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6777 <search_score name="xcorr" value="0.270"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6778 <search_score name="deltacn" value="0.060"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6779 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6780 <search_score name="spscore" value="0.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6781 <search_score name="sprank" value="11"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6782 <search_score name="expect" value="2.84E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6783 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6784 <search_hit hit_rank="4" peptide="VLNDMTTAAE" peptide_prev_aa="K" peptide_next_aa="E" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="18" calc_neutral_pep_mass="1063.485576" massdiff="1.017669" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="642">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6785 <search_score name="xcorr" value="0.254"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6786 <search_score name="deltacn" value="0.015"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6787 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6788 <search_score name="spscore" value="4.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6789 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6790 <search_score name="expect" value="3.38E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6791 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6792 <search_hit hit_rank="5" peptide="LAYLCEPVP" peptide_prev_aa="R" peptide_next_aa="G" protein="XXX_gi|528921178|ref|XP_592304.7|" num_tot_proteins="3" num_matched_ions="0" tot_num_ions="16" calc_neutral_pep_mass="1061.510334" massdiff="2.992910" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="642">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6793 <modification_info modified_peptide="LAYLCEPVP">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6794 <mod_aminoacid_mass position="5" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6795 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6796 <search_score name="xcorr" value="0.250"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6797 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6798 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6799 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6800 <search_score name="sprank" value="24"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6801 <search_score name="expect" value="3.51E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6802 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6803 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6804 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6805 <spectrum_query spectrum="201208-378803.00071.00071.2" spectrumNativeID="sample=1 period=1 cycle=1217 experiment=4" start_scan="71" end_scan="71" precursor_neutral_mass="1141.631808" assumed_charge="2" index="141" retention_time_sec="780.2">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6806 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6807 <search_hit hit_rank="1" peptide="AVAGVIDLGTVE" peptide_prev_aa="R" peptide_next_aa="I" protein="gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="3" tot_num_ions="22" calc_neutral_pep_mass="1142.618304" massdiff="-0.986496" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="470">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6808 <search_score name="xcorr" value="0.585"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6809 <search_score name="deltacn" value="0.097"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6810 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6811 <search_score name="spscore" value="7.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6812 <search_score name="sprank" value="4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6813 <search_score name="expect" value="4.21E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6814 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6815 <search_hit hit_rank="2" peptide="QNSPKVQNVK" peptide_prev_aa="E" peptide_next_aa="E" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="18" calc_neutral_pep_mass="1141.609137" massdiff="0.022671" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="470">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6816 <modification_info modified_peptide="QN[115]SPKVQNVK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6817 <mod_aminoacid_mass position="2" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6818 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6819 <search_score name="xcorr" value="0.528"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6820 <search_score name="deltacn" value="0.001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6821 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6822 <search_score name="spscore" value="6.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6823 <search_score name="sprank" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6824 <search_score name="expect" value="7.13E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6825 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6826 <search_hit hit_rank="3" peptide="GALILRQQDK" peptide_prev_aa="P" peptide_next_aa="Q" protein="XXX_gi|528918160|ref|XP_005195085.1|" num_tot_proteins="2" num_matched_ions="1" tot_num_ions="18" calc_neutral_pep_mass="1141.645523" massdiff="-0.013715" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="470">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6827 <modification_info modified_peptide="GALILRQQ[129]DK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6828 <mod_aminoacid_mass position="8" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6829 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6830 <search_score name="xcorr" value="0.527"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6831 <search_score name="deltacn" value="0.104"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6832 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6833 <search_score name="spscore" value="0.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6834 <search_score name="sprank" value="15"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6835 <search_score name="expect" value="7.16E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6836 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6837 <search_hit hit_rank="4" peptide="QLAPNADGVKK" peptide_prev_aa="L" peptide_next_aa="V" protein="XXX_gi|30466252|ref|NP_848667.1|" num_tot_proteins="1" num_matched_ions="0" tot_num_ions="20" calc_neutral_pep_mass="1140.613888" massdiff="1.017920" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="470">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6838 <modification_info modified_peptide="QLAPN[115]ADGVKK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6839 <mod_aminoacid_mass position="5" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6840 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6841 <search_score name="xcorr" value="0.472"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6842 <search_score name="deltacn" value="0.006"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6843 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6844 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6845 <search_score name="sprank" value="19"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6846 <search_score name="expect" value="1.19E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6847 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6848 <search_hit hit_rank="5" peptide="GALILRQQDK" peptide_prev_aa="P" peptide_next_aa="Q" protein="XXX_gi|528918160|ref|XP_005195085.1|" num_tot_proteins="2" num_matched_ions="1" tot_num_ions="18" calc_neutral_pep_mass="1141.645523" massdiff="-0.013715" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="470">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6849 <modification_info modified_peptide="GALILRQ[129]QDK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6850 <mod_aminoacid_mass position="7" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6851 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6852 <search_score name="xcorr" value="0.469"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6853 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6854 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6855 <search_score name="spscore" value="0.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6856 <search_score name="sprank" value="15"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6857 <search_score name="expect" value="1.23E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6858 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6859 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6860 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6861 <spectrum_query spectrum="201208-378803.00071.00071.3" spectrumNativeID="sample=1 period=1 cycle=1217 experiment=4" start_scan="71" end_scan="71" precursor_neutral_mass="1712.447712" assumed_charge="3" index="142" retention_time_sec="780.2">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6862 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6863 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6864 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6865 <spectrum_query spectrum="201208-378803.00072.00072.2" spectrumNativeID="sample=1 period=1 cycle=1217 experiment=5" start_scan="72" end_scan="72" precursor_neutral_mass="951.381158" assumed_charge="2" index="143" retention_time_sec="782.3">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6866 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6867 <search_hit hit_rank="1" peptide="GEEELMQT" peptide_prev_aa="R" peptide_next_aa="L" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="5" tot_num_ions="14" calc_neutral_pep_mass="951.385513" massdiff="-0.004354" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="258">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6868 <modification_info modified_peptide="GEEELM[147]QT">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6869 <mod_aminoacid_mass position="6" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6870 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6871 <search_score name="xcorr" value="0.710"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6872 <search_score name="deltacn" value="0.340"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6873 <search_score name="deltacnstar" value="0.307"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6874 <search_score name="spscore" value="41.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6875 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6876 <search_score name="expect" value="2.69E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6877 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6878 <search_hit hit_rank="2" peptide="GEEELMQT" peptide_prev_aa="R" peptide_next_aa="L" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="14" calc_neutral_pep_mass="952.369529" massdiff="-0.988370" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="258">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6879 <modification_info modified_peptide="GEEELM[147]Q[129]T">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6880 <mod_aminoacid_mass position="6" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6881 <mod_aminoacid_mass position="7" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6882 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6883 <search_score name="xcorr" value="0.493"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6884 <search_score name="deltacn" value="0.049"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6885 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6886 <search_score name="spscore" value="15.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6887 <search_score name="sprank" value="4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6888 <search_score name="expect" value="1.51E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6889 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6890 <search_hit hit_rank="3" peptide="MEEQQQR" peptide_prev_aa="R" peptide_next_aa="Q" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="12" calc_neutral_pep_mass="950.365127" massdiff="1.016031" num_tol_term="2" num_missed_cleavages="0" num_matched_peptides="258">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6891 <modification_info modified_peptide="MEEQ[129]Q[129]Q[129]R">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6892 <mod_aminoacid_mass position="4" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6893 <mod_aminoacid_mass position="5" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6894 <mod_aminoacid_mass position="6" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6895 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6896 <search_score name="xcorr" value="0.469"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6897 <search_score name="deltacn" value="0.069"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6898 <search_score name="deltacnstar" value="0.042"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6899 <search_score name="spscore" value="16.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6900 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6901 <search_score name="expect" value="1.83E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6902 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6903 <search_hit hit_rank="4" peptide="MEEQQQR" peptide_prev_aa="R" peptide_next_aa="Q" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="12" calc_neutral_pep_mass="949.381111" massdiff="2.000047" num_tol_term="2" num_missed_cleavages="0" num_matched_peptides="258">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6904 <modification_info modified_peptide="MEEQ[129]Q[129]QR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6905 <mod_aminoacid_mass position="4" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6906 <mod_aminoacid_mass position="5" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6907 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6908 <search_score name="xcorr" value="0.449"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6909 <search_score name="deltacn" value="0.028"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6910 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6911 <search_score name="spscore" value="16.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6912 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6913 <search_score name="expect" value="2.13E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6914 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6915 <search_hit hit_rank="5" peptide="DMNQNIGAS" peptide_prev_aa="K" peptide_next_aa="I" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="16" calc_neutral_pep_mass="949.381111" massdiff="2.000047" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="258">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6916 <modification_info modified_peptide="DMNQN[115]IGAS">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6917 <mod_aminoacid_mass position="5" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6918 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6919 <search_score name="xcorr" value="0.436"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6920 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6921 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6922 <search_score name="spscore" value="6.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6923 <search_score name="sprank" value="6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6924 <search_score name="expect" value="2.36E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6925 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6926 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6927 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6928 <spectrum_query spectrum="201208-378803.00072.00072.3" spectrumNativeID="sample=1 period=1 cycle=1217 experiment=5" start_scan="72" end_scan="72" precursor_neutral_mass="1427.071737" assumed_charge="3" index="144" retention_time_sec="782.3">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6929 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6930 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6931 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6932 <spectrum_query spectrum="201208-378803.00073.00073.3" spectrumNativeID="sample=1 period=1 cycle=1218 experiment=2" start_scan="73" end_scan="73" precursor_neutral_mass="1730.290499" assumed_charge="3" index="145" retention_time_sec="784.9">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6933 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6934 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6935 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6936 <spectrum_query spectrum="201208-378803.00073.00073.2" spectrumNativeID="sample=1 period=1 cycle=1218 experiment=2" start_scan="73" end_scan="73" precursor_neutral_mass="1153.526999" assumed_charge="2" index="146" retention_time_sec="784.9">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6937 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6938 <search_hit hit_rank="1" peptide="QTKLDQCQK" peptide_prev_aa="N" peptide_next_aa="F" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="16" calc_neutral_pep_mass="1150.517606" massdiff="3.009394" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="474">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6939 <modification_info modified_peptide="QTKLDQ[129]CQ[129]K">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6940 <mod_aminoacid_mass position="6" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6941 <mod_aminoacid_mass position="7" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6942 <mod_aminoacid_mass position="8" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6943 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6944 <search_score name="xcorr" value="0.500"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6945 <search_score name="deltacn" value="0.077"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6946 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6947 <search_score name="spscore" value="4.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6948 <search_score name="sprank" value="15"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6949 <search_score name="expect" value="1.38E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6950 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6951 <search_hit hit_rank="2" peptide="DQDPIPQNID" peptide_prev_aa="R" peptide_next_aa="R" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="18" calc_neutral_pep_mass="1153.525132" massdiff="0.001867" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="474">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6952 <search_score name="xcorr" value="0.461"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6953 <search_score name="deltacn" value="0.019"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6954 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6955 <search_score name="spscore" value="17.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6956 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6957 <search_score name="expect" value="1.95E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6958 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6959 <search_hit hit_rank="3" peptide="PHRAESSTDR" peptide_prev_aa="T" peptide_next_aa="A" protein="XXX_gi|358418103|ref|XP_600387.4|" num_tot_proteins="4" num_matched_ions="3" tot_num_ions="18" calc_neutral_pep_mass="1154.542848" massdiff="-1.015849" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="474">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6960 <search_score name="xcorr" value="0.452"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6961 <search_score name="deltacn" value="0.053"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6962 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6963 <search_score name="spscore" value="15.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6964 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6965 <search_score name="expect" value="2.11E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6966 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6967 <search_hit hit_rank="4" peptide="SSSNHLNFTF" peptide_prev_aa="K" peptide_next_aa="G" protein="XXX_gi|28849955|ref|NP_788795.1|" num_tot_proteins="1" num_matched_ions="3" tot_num_ions="18" calc_neutral_pep_mass="1153.504003" massdiff="0.022996" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="474">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6968 <modification_info modified_peptide="SSSNHLN[115]FTF">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6969 <mod_aminoacid_mass position="7" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6970 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6971 <search_score name="xcorr" value="0.428"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6972 <search_score name="deltacn" value="0.004"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6973 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6974 <search_score name="spscore" value="20.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6975 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6976 <search_score name="expect" value="2.62E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6977 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6978 <search_hit hit_rank="5" peptide="EVSKGCVTDR" peptide_prev_aa="W" peptide_next_aa="Q" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="18" calc_neutral_pep_mass="1150.528838" massdiff="2.998161" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="474">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6979 <modification_info modified_peptide="EVSKGCVTDR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6980 <mod_aminoacid_mass position="6" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6981 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6982 <search_score name="xcorr" value="0.427"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6983 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6984 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6985 <search_score name="spscore" value="15.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6986 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6987 <search_score name="expect" value="2.66E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6988 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6989 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6990 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6991 <spectrum_query spectrum="201208-378803.00074.00074.3" spectrumNativeID="sample=1 period=1 cycle=1218 experiment=3" start_scan="74" end_scan="74" precursor_neutral_mass="1410.627712" assumed_charge="3" index="147" retention_time_sec="787.0">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6992 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6993 <search_hit hit_rank="1" peptide="SGANGTKTSEENGR" peptide_prev_aa="G" peptide_next_aa="L" protein="XXX_gi|528935739|ref|XP_005201142.1|" num_tot_proteins="2" num_matched_ions="2" tot_num_ions="52" calc_neutral_pep_mass="1407.622615" massdiff="3.005097" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1072">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6994 <modification_info modified_peptide="SGAN[115]GTKTSEENGR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6995 <mod_aminoacid_mass position="4" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6996 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6997 <search_score name="xcorr" value="0.493"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6998 <search_score name="deltacn" value="0.072"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
6999 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7000 <search_score name="spscore" value="3.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7001 <search_score name="sprank" value="11"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7002 <search_score name="expect" value="9.79E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7003 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7004 <search_hit hit_rank="2" peptide="SNEESTSLQERK" peptide_prev_aa="N" peptide_next_aa="K" protein="XXX_gi|27806963|ref|NP_776953.1|" num_tot_proteins="1" num_matched_ions="3" tot_num_ions="44" calc_neutral_pep_mass="1408.631783" massdiff="1.995929" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1072">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7005 <modification_info modified_peptide="SN[115]EESTSLQ[129]ERK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7006 <mod_aminoacid_mass position="2" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7007 <mod_aminoacid_mass position="9" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7008 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7009 <search_score name="xcorr" value="0.457"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7010 <search_score name="deltacn" value="0.124"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7011 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7012 <search_score name="spscore" value="8.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7013 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7014 <search_score name="expect" value="1.45E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7015 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7016 <search_hit hit_rank="3" peptide="QQDPPIGEKDQR" peptide_prev_aa="I" peptide_next_aa="L" protein="XXX_gi|528918160|ref|XP_005195085.1|" num_tot_proteins="26" num_matched_ions="2" tot_num_ions="44" calc_neutral_pep_mass="1411.657938" massdiff="-1.030226" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1072">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7017 <modification_info modified_peptide="QQ[129]DPPIGEKDQ[129]R">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7018 <mod_aminoacid_mass position="2" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7019 <mod_aminoacid_mass position="11" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7020 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7021 <search_score name="xcorr" value="0.400"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7022 <search_score name="deltacn" value="0.078"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7023 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7024 <search_score name="spscore" value="3.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7025 <search_score name="sprank" value="8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7026 <search_score name="expect" value="2.71E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7027 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7028 <search_hit hit_rank="4" peptide="NPRMETESLQTT" peptide_prev_aa="K" peptide_next_aa="E" protein="XXX_gi|528928354|ref|XP_005193233.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="44" calc_neutral_pep_mass="1407.618776" massdiff="3.008936" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1072">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7029 <modification_info modified_peptide="N[115]PRMETESLQ[129]TT">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7030 <mod_aminoacid_mass position="1" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7031 <mod_aminoacid_mass position="10" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7032 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7033 <search_score name="xcorr" value="0.369"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7034 <search_score name="deltacn" value="0.003"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7035 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7036 <search_score name="spscore" value="0.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7037 <search_score name="sprank" value="30"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7038 <search_score name="expect" value="3.83E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7039 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7040 <search_hit hit_rank="5" peptide="QQDPPIGEKDQR" peptide_prev_aa="I" peptide_next_aa="L" protein="XXX_gi|528918160|ref|XP_005195085.1|" num_tot_proteins="26" num_matched_ions="2" tot_num_ions="44" calc_neutral_pep_mass="1411.657938" massdiff="-1.030226" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1072">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7041 <modification_info modified_peptide="Q[129]QDPPIGEKDQ[129]R">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7042 <mod_aminoacid_mass position="1" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7043 <mod_aminoacid_mass position="11" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7044 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7045 <search_score name="xcorr" value="0.368"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7046 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7047 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7048 <search_score name="spscore" value="3.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7049 <search_score name="sprank" value="8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7050 <search_score name="expect" value="3.88E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7051 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7052 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7053 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7054 <spectrum_query spectrum="201208-378803.00074.00074.2" spectrumNativeID="sample=1 period=1 cycle=1218 experiment=3" start_scan="74" end_scan="74" precursor_neutral_mass="940.418475" assumed_charge="2" index="148" retention_time_sec="787.0">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7055 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7056 <search_hit hit_rank="1" peptide="LETQYCK" peptide_prev_aa="K" peptide_next_aa="L" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="12" calc_neutral_pep_mass="941.416434" massdiff="-0.997959" num_tol_term="2" num_missed_cleavages="0" num_matched_peptides="478">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7057 <modification_info modified_peptide="LETQYCK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7058 <mod_aminoacid_mass position="6" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7059 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7060 <search_score name="xcorr" value="0.347"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7061 <search_score name="deltacn" value="0.065"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7062 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7063 <search_score name="spscore" value="8.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7064 <search_score name="sprank" value="4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7065 <search_score name="expect" value="1.00E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7066 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7067 <search_hit hit_rank="2" peptide="GTMFTMPR" peptide_prev_aa="L" peptide_next_aa="L" protein="gi|139948503|ref|NP_001077142.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="14" calc_neutral_pep_mass="939.430644" massdiff="0.987831" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="478">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7068 <search_score name="xcorr" value="0.324"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7069 <search_score name="deltacn" value="0.021"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7070 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7071 <search_score name="spscore" value="3.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7072 <search_score name="sprank" value="9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7073 <search_score name="expect" value="1.36E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7074 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7075 <search_hit hit_rank="3" peptide="SQGMTPFR" peptide_prev_aa="A" peptide_next_aa="S" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="14" calc_neutral_pep_mass="939.412002" massdiff="1.006472" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="478">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7076 <modification_info modified_peptide="SQ[129]GM[147]TPFR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7077 <mod_aminoacid_mass position="2" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7078 <mod_aminoacid_mass position="4" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7079 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7080 <search_score name="xcorr" value="0.317"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7081 <search_score name="deltacn" value="0.170"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7082 <search_score name="deltacnstar" value="0.036"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7083 <search_score name="spscore" value="10.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7084 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7085 <search_score name="expect" value="1.49E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7086 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7087 <search_hit hit_rank="4" peptide="SQGMTPFR" peptide_prev_aa="A" peptide_next_aa="S" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="14" calc_neutral_pep_mass="938.427986" massdiff="1.990488" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="478">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7088 <modification_info modified_peptide="SQGM[147]TPFR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7089 <mod_aminoacid_mass position="4" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7090 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7091 <search_score name="xcorr" value="0.306"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7092 <search_score name="deltacn" value="0.139"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7093 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7094 <search_score name="spscore" value="9.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7095 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7096 <search_score name="expect" value="1.75E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7097 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7098 <search_hit hit_rank="5" peptide="SQLQWMK" peptide_prev_aa="Q" peptide_next_aa="Q" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="12" calc_neutral_pep_mass="937.421505" massdiff="2.996970" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="478">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7099 <modification_info modified_peptide="SQ[129]LQ[129]WM[147]K">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7100 <mod_aminoacid_mass position="2" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7101 <mod_aminoacid_mass position="4" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7102 <mod_aminoacid_mass position="6" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7103 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7104 <search_score name="xcorr" value="0.263"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7105 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7106 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7107 <search_score name="spscore" value="12.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7108 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7109 <search_score name="expect" value="3.12E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7110 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7111 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7112 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7113 <spectrum_query spectrum="201208-378803.00075.00075.3" spectrumNativeID="sample=1 period=1 cycle=1218 experiment=4" start_scan="75" end_scan="75" precursor_neutral_mass="1940.427160" assumed_charge="3" index="149" retention_time_sec="789.2">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7114 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7115 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7116 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7117 <spectrum_query spectrum="201208-378803.00075.00075.2" spectrumNativeID="sample=1 period=1 cycle=1218 experiment=4" start_scan="75" end_scan="75" precursor_neutral_mass="1293.618107" assumed_charge="2" index="150" retention_time_sec="789.2">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7118 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7119 <search_hit hit_rank="1" peptide="LLQDSMAQDEK" peptide_prev_aa="D" peptide_next_aa="E" protein="gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="20" calc_neutral_pep_mass="1292.591817" massdiff="1.026290" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="1060">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7120 <modification_info modified_peptide="LLQDSM[147]AQDEK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7121 <mod_aminoacid_mass position="6" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7122 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7123 <search_score name="xcorr" value="0.658"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7124 <search_score name="deltacn" value="0.305"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7125 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7126 <search_score name="spscore" value="9.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7127 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7128 <search_score name="expect" value="2.18E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7129 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7130 <search_hit hit_rank="2" peptide="WKTRQSNDEK" peptide_prev_aa="L" peptide_next_aa="V" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="18" calc_neutral_pep_mass="1290.631663" massdiff="2.986444" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="1060">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7131 <search_score name="xcorr" value="0.457"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7132 <search_score name="deltacn" value="0.002"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7133 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7134 <search_score name="spscore" value="15.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7135 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7136 <search_score name="expect" value="1.65E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7137 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7138 <search_hit hit_rank="3" peptide="WKTRQSNDEK" peptide_prev_aa="L" peptide_next_aa="V" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="18" calc_neutral_pep_mass="1291.615679" massdiff="2.002428" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="1060">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7139 <modification_info modified_peptide="WKTRQ[129]SNDEK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7140 <mod_aminoacid_mass position="5" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7141 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7142 <search_score name="xcorr" value="0.457"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7143 <search_score name="deltacn" value="0.001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7144 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7145 <search_score name="spscore" value="15.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7146 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7147 <search_score name="expect" value="1.65E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7148 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7149 <search_hit hit_rank="4" peptide="VYQQQIEMEK" peptide_prev_aa="E" peptide_next_aa="L" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="18" calc_neutral_pep_mass="1294.622738" massdiff="-1.004631" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="1060">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7150 <search_score name="xcorr" value="0.456"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7151 <search_score name="deltacn" value="0.091"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7152 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7153 <search_score name="spscore" value="1.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7154 <search_score name="sprank" value="10"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7155 <search_score name="expect" value="1.66E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7156 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7157 <search_hit hit_rank="5" peptide="MMKVNVAEQLE" peptide_prev_aa="K" peptide_next_aa="T" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="20" calc_neutral_pep_mass="1291.615210" massdiff="2.002897" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1060">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7158 <modification_info modified_peptide="MMKVNVAEQ[129]LE">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7159 <mod_aminoacid_mass position="9" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7160 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7161 <search_score name="xcorr" value="0.415"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7162 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7163 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7164 <search_score name="spscore" value="6.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7165 <search_score name="sprank" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7166 <search_score name="expect" value="2.52E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7167 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7168 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7169 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7170 <spectrum_query spectrum="201208-378803.00076.00076.2" spectrumNativeID="sample=1 period=1 cycle=1218 experiment=5" start_scan="76" end_scan="76" precursor_neutral_mass="1173.529087" assumed_charge="2" index="151" retention_time_sec="791.3">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7171 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7172 <search_hit hit_rank="1" peptide="MVQHYEGPAK" peptide_prev_aa="S" peptide_next_aa="N" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="18" calc_neutral_pep_mass="1174.544079" massdiff="-1.014992" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="590">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7173 <modification_info modified_peptide="M[147]VQHYEGPAK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7174 <mod_aminoacid_mass position="1" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7175 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7176 <search_score name="xcorr" value="0.587"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7177 <search_score name="deltacn" value="0.029"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7178 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7179 <search_score name="spscore" value="2.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7180 <search_score name="sprank" value="13"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7181 <search_score name="expect" value="8.80E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7182 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7183 <search_hit hit_rank="2" peptide="KWSPLAEEES" peptide_prev_aa="R" peptide_next_aa="V" protein="XXX_gi|358418103|ref|XP_600387.4|" num_tot_proteins="4" num_matched_ions="2" tot_num_ions="18" calc_neutral_pep_mass="1174.550619" massdiff="-1.021532" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="590">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7184 <search_score name="xcorr" value="0.570"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7185 <search_score name="deltacn" value="0.086"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7186 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7187 <search_score name="spscore" value="7.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7188 <search_score name="sprank" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7189 <search_score name="expect" value="1.02E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7190 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7191 <search_hit hit_rank="3" peptide="ATSPQTKEPTD" peptide_prev_aa="K" peptide_next_aa="I" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="20" calc_neutral_pep_mass="1174.535363" massdiff="-1.006276" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="590">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7192 <modification_info modified_peptide="ATSPQ[129]TKEPTD">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7193 <mod_aminoacid_mass position="5" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7194 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7195 <search_score name="xcorr" value="0.521"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7196 <search_score name="deltacn" value="0.036"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7197 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7198 <search_score name="spscore" value="10.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7199 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7200 <search_score name="expect" value="1.55E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7201 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7202 <search_hit hit_rank="4" peptide="KQEESAEAGAPG" peptide_prev_aa="R" peptide_next_aa="G" protein="gi|528921178|ref|XP_592304.7|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="22" calc_neutral_pep_mass="1172.530946" massdiff="0.998141" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="590">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7203 <search_score name="xcorr" value="0.502"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7204 <search_score name="deltacn" value="0.149"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7205 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7206 <search_score name="spscore" value="1.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7207 <search_score name="sprank" value="21"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7208 <search_score name="expect" value="1.83E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7209 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7210 <search_hit hit_rank="5" peptide="TPEKTQPSTAD" peptide_prev_aa="K" peptide_next_aa="I" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="20" calc_neutral_pep_mass="1173.551347" massdiff="-0.022260" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="590">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7211 <search_score name="xcorr" value="0.427"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7212 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7213 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7214 <search_score name="spscore" value="5.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7215 <search_score name="sprank" value="8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7216 <search_score name="expect" value="3.48E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7217 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7218 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7219 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7220 <spectrum_query spectrum="201208-378803.00076.00076.3" spectrumNativeID="sample=1 period=1 cycle=1218 experiment=5" start_scan="76" end_scan="76" precursor_neutral_mass="1760.293630" assumed_charge="3" index="152" retention_time_sec="791.3">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7221 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7222 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7223 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7224 <spectrum_query spectrum="201208-378803.00077.00077.2" spectrumNativeID="sample=1 period=1 cycle=1219 experiment=2" start_scan="77" end_scan="77" precursor_neutral_mass="972.472063" assumed_charge="2" index="153" retention_time_sec="792.6">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7225 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7226 <search_hit hit_rank="1" peptide="ALGSHVIDY" peptide_prev_aa="K" peptide_next_aa="T" protein="XXX_gi|32880221|ref|NP_872593.1|" num_tot_proteins="1" num_matched_ions="0" tot_num_ions="16" calc_neutral_pep_mass="973.486896" massdiff="-1.014833" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="404">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7227 <search_score name="xcorr" value="0.483"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7228 <search_score name="deltacn" value="0.011"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7229 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7230 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7231 <search_score name="sprank" value="13"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7232 <search_score name="expect" value="5.24E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7233 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7234 <search_hit hit_rank="2" peptide="TEPHSFQK" peptide_prev_aa="R" peptide_next_aa="E" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="14" calc_neutral_pep_mass="972.466495" massdiff="0.005568" num_tol_term="2" num_missed_cleavages="0" num_matched_peptides="404">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7235 <search_score name="xcorr" value="0.478"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7236 <search_score name="deltacn" value="0.031"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7237 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7238 <search_score name="spscore" value="4.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7239 <search_score name="sprank" value="4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7240 <search_score name="expect" value="5.56E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7241 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7242 <search_hit hit_rank="3" peptide="ALDARDDAK" peptide_prev_aa="C" peptide_next_aa="Y" protein="XXX_gi|30794280|ref|NP_851335.1|" num_tot_proteins="1" num_matched_ions="0" tot_num_ions="16" calc_neutral_pep_mass="973.482873" massdiff="-1.010810" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="404">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7243 <search_score name="xcorr" value="0.463"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7244 <search_score name="deltacn" value="0.038"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7245 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7246 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7247 <search_score name="sprank" value="13"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7248 <search_score name="expect" value="6.58E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7249 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7250 <search_hit hit_rank="4" peptide="TQQQENPK" peptide_prev_aa="M" peptide_next_aa="F" protein="gi|528921178|ref|XP_592304.7|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="14" calc_neutral_pep_mass="971.467223" massdiff="1.004840" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="404">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7251 <search_score name="xcorr" value="0.445"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7252 <search_score name="deltacn" value="0.107"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7253 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7254 <search_score name="spscore" value="5.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7255 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7256 <search_score name="expect" value="8.01E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7257 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7258 <search_hit hit_rank="5" peptide="DQNRISIGA" peptide_prev_aa="K" peptide_next_aa="L" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="3" tot_num_ions="16" calc_neutral_pep_mass="973.482874" massdiff="-1.010811" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="404">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7259 <modification_info modified_peptide="DQN[115]RISIGA">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7260 <mod_aminoacid_mass position="3" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7261 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7262 <search_score name="xcorr" value="0.398"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7263 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7264 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7265 <search_score name="spscore" value="6.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7266 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7267 <search_score name="expect" value="1.36E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7268 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7269 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7270 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7271 <spectrum_query spectrum="201208-378803.00077.00077.3" spectrumNativeID="sample=1 period=1 cycle=1219 experiment=2" start_scan="77" end_scan="77" precursor_neutral_mass="1458.708095" assumed_charge="3" index="154" retention_time_sec="792.6">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7272 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7273 <search_hit hit_rank="1" peptide="EGQLRMKEAAPNL" peptide_prev_aa="R" peptide_next_aa="D" protein="XXX_gi|358418103|ref|XP_600387.4|" num_tot_proteins="4" num_matched_ions="3" tot_num_ions="48" calc_neutral_pep_mass="1457.718430" massdiff="0.989665" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="1274">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7274 <modification_info modified_peptide="EGQ[129]LRMKEAAPN[115]L">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7275 <mod_aminoacid_mass position="3" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7276 <mod_aminoacid_mass position="12" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7277 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7278 <search_score name="xcorr" value="0.654"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7279 <search_score name="deltacn" value="0.023"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7280 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7281 <search_score name="spscore" value="2.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7282 <search_score name="sprank" value="4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7283 <search_score name="expect" value="1.57E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7284 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7285 <search_hit hit_rank="2" peptide="VVRMTQQQENPK" peptide_prev_aa="E" peptide_next_aa="F" protein="gi|528921178|ref|XP_592304.7|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="44" calc_neutral_pep_mass="1457.729663" massdiff="0.978432" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1274">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7286 <modification_info modified_peptide="VVRMTQ[129]QQENPK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7287 <mod_aminoacid_mass position="6" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7288 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7289 <search_score name="xcorr" value="0.639"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7290 <search_score name="deltacn" value="0.028"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7291 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7292 <search_score name="spscore" value="1.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7293 <search_score name="sprank" value="6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7294 <search_score name="expect" value="1.76E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7295 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7296 <search_hit hit_rank="3" peptide="PLSIDPNMLNAQK" peptide_prev_aa="G" peptide_next_aa="Q" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="48" calc_neutral_pep_mass="1458.691198" massdiff="0.016897" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="1274">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7297 <modification_info modified_peptide="PLSIDPN[115]M[147]LN[115]AQ[129]K">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7298 <mod_aminoacid_mass position="7" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7299 <mod_aminoacid_mass position="8" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7300 <mod_aminoacid_mass position="10" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7301 <mod_aminoacid_mass position="12" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7302 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7303 <search_score name="xcorr" value="0.621"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7304 <search_score name="deltacn" value="0.070"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7305 <search_score name="deltacnstar" value="0.002"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7306 <search_score name="spscore" value="2.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7307 <search_score name="sprank" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7308 <search_score name="expect" value="2.03E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7309 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7310 <search_hit hit_rank="4" peptide="PLSIDPNMLNAQK" peptide_prev_aa="G" peptide_next_aa="Q" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="48" calc_neutral_pep_mass="1457.707182" massdiff="1.000913" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="1274">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7311 <modification_info modified_peptide="PLSIDPNM[147]LN[115]AQ[129]K">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7312 <mod_aminoacid_mass position="8" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7313 <mod_aminoacid_mass position="10" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7314 <mod_aminoacid_mass position="12" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7315 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7316 <search_score name="xcorr" value="0.620"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7317 <search_score name="deltacn" value="0.069"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7318 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7319 <search_score name="spscore" value="2.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7320 <search_score name="sprank" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7321 <search_score name="expect" value="2.05E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7322 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7323 <search_hit hit_rank="5" peptide="ENKRFQAFMNR" peptide_prev_aa="N" peptide_next_aa="D" protein="XXX_gi|528968106|ref|XP_005212568.1|" num_tot_proteins="2" num_matched_ions="1" tot_num_ions="40" calc_neutral_pep_mass="1456.688118" massdiff="2.019977" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="1274">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7324 <modification_info modified_peptide="ENKRFQAFM[147]N[115]R">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7325 <mod_aminoacid_mass position="9" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7326 <mod_aminoacid_mass position="10" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7327 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7328 <search_score name="xcorr" value="0.577"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7329 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7330 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7331 <search_score name="spscore" value="0.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7332 <search_score name="sprank" value="17"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7333 <search_score name="expect" value="2.87E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7334 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7335 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7336 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7337 <spectrum_query spectrum="201208-378803.00078.00078.2" spectrumNativeID="sample=1 period=1 cycle=1219 experiment=3" start_scan="78" end_scan="78" precursor_neutral_mass="1016.499382" assumed_charge="2" index="155" retention_time_sec="794.8">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7338 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7339 <search_hit hit_rank="1" peptide="PHGSPSPLEP" peptide_prev_aa="K" peptide_next_aa="E" protein="XXX_gi|358418103|ref|XP_600387.4|" num_tot_proteins="4" num_matched_ions="1" tot_num_ions="18" calc_neutral_pep_mass="1016.492710" massdiff="0.006672" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="964">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7340 <search_score name="xcorr" value="0.493"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7341 <search_score name="deltacn" value="0.160"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7342 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7343 <search_score name="spscore" value="5.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7344 <search_score name="sprank" value="8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7345 <search_score name="expect" value="1.02E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7346 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7347 <search_hit hit_rank="2" peptide="THSGEKPYV" peptide_prev_aa="R" peptide_next_aa="C" protein="gi|528908812|ref|XP_609847.5|" num_tot_proteins="12" num_matched_ions="2" tot_num_ions="16" calc_neutral_pep_mass="1016.492710" massdiff="0.006672" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="964">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7348 <search_score name="xcorr" value="0.415"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7349 <search_score name="deltacn" value="0.014"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7350 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7351 <search_score name="spscore" value="6.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7352 <search_score name="sprank" value="6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7353 <search_score name="expect" value="2.36E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7354 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7355 <search_hit hit_rank="3" peptide="DFPIANGER" peptide_prev_aa="K" peptide_next_aa="Q" protein="gi|30466252|ref|NP_848667.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="16" calc_neutral_pep_mass="1017.487959" massdiff="-0.988577" num_tol_term="2" num_missed_cleavages="0" num_matched_peptides="964">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7356 <search_score name="xcorr" value="0.409"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7357 <search_score name="deltacn" value="0.025"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7358 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7359 <search_score name="spscore" value="1.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7360 <search_score name="sprank" value="19"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7361 <search_score name="expect" value="2.52E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7362 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7363 <search_hit hit_rank="4" peptide="QNVGIMPEL" peptide_prev_aa="K" peptide_next_aa="F" protein="XXX_gi|528953236|ref|XP_005208081.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="16" calc_neutral_pep_mass="1016.484833" massdiff="0.014548" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="964">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7364 <modification_info modified_peptide="QN[115]VGIM[147]PEL">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7365 <mod_aminoacid_mass position="2" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7366 <mod_aminoacid_mass position="6" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7367 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7368 <search_score name="xcorr" value="0.398"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7369 <search_score name="deltacn" value="0.011"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7370 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7371 <search_score name="spscore" value="0.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7372 <search_score name="sprank" value="23"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7373 <search_score name="expect" value="2.81E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7374 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7375 <search_hit hit_rank="5" peptide="LQQVNGLGQG" peptide_prev_aa="K" peptide_next_aa="L" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="18" calc_neutral_pep_mass="1014.498190" massdiff="2.001192" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="964">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7376 <modification_info modified_peptide="LQQVN[115]GLGQ[129]G">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7377 <mod_aminoacid_mass position="5" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7378 <mod_aminoacid_mass position="9" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7379 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7380 <search_score name="xcorr" value="0.394"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7381 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7382 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7383 <search_score name="spscore" value="6.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7384 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7385 <search_score name="expect" value="2.95E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7386 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7387 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7388 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7389 <spectrum_query spectrum="201208-378803.00078.00078.3" spectrumNativeID="sample=1 period=1 cycle=1219 experiment=3" start_scan="78" end_scan="78" precursor_neutral_mass="1524.749072" assumed_charge="3" index="156" retention_time_sec="794.8">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7390 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7391 <search_hit hit_rank="1" peptide="REIQEIQAFTGSF" peptide_prev_aa="K" peptide_next_aa="V" protein="gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="5" tot_num_ions="48" calc_neutral_pep_mass="1525.741273" massdiff="-0.992201" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1382">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7392 <modification_info modified_peptide="REIQ[129]EIQAFTGSF">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7393 <mod_aminoacid_mass position="4" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7394 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7395 <search_score name="xcorr" value="0.797"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7396 <search_score name="deltacn" value="0.070"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7397 <search_score name="deltacnstar" value="0.059"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7398 <search_score name="spscore" value="18.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7399 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7400 <search_score name="expect" value="3.99E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7401 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7402 <search_hit hit_rank="2" peptide="REIQEIQAFTGSF" peptide_prev_aa="K" peptide_next_aa="V" protein="gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="4" tot_num_ions="48" calc_neutral_pep_mass="1524.757258" massdiff="-0.008185" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1382">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7403 <search_score name="xcorr" value="0.750"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7404 <search_score name="deltacn" value="0.012"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7405 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7406 <search_score name="spscore" value="13.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7407 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7408 <search_score name="expect" value="5.92E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7409 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7410 <search_hit hit_rank="3" peptide="KPSPCEFINTTAR" peptide_prev_aa="K" peptide_next_aa="V" protein="gi|528993971|ref|XP_005219929.1|" num_tot_proteins="4" num_matched_ions="1" tot_num_ions="48" calc_neutral_pep_mass="1521.713345" massdiff="3.035727" num_tol_term="2" num_missed_cleavages="1" num_matched_peptides="1382">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7411 <modification_info modified_peptide="KPSPCEFIN[115]TTAR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7412 <mod_aminoacid_mass position="5" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7413 <mod_aminoacid_mass position="9" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7414 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7415 <search_score name="xcorr" value="0.741"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7416 <search_score name="deltacn" value="0.082"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7417 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7418 <search_score name="spscore" value="0.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7419 <search_score name="sprank" value="31"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7420 <search_score name="expect" value="6.39E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7421 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7422 <search_hit hit_rank="4" peptide="LNGASMIAMVRTGTT" peptide_prev_aa="R" peptide_next_aa="G" protein="XXX_gi|528920173|ref|XP_001788336.2|" num_tot_proteins="2" num_matched_ions="2" tot_num_ions="56" calc_neutral_pep_mass="1521.764334" massdiff="2.984739" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1382">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7423 <search_score name="xcorr" value="0.680"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7424 <search_score name="deltacn" value="0.089"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7425 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7426 <search_score name="spscore" value="1.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7427 <search_score name="sprank" value="24"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7428 <search_score name="expect" value="1.07E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7429 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7430 <search_hit hit_rank="5" peptide="SAITQKIWSVYNN" peptide_prev_aa="C" peptide_next_aa="-" protein="XXX_gi|528903801|ref|XP_871686.4|" num_tot_proteins="3" num_matched_ions="4" tot_num_ions="48" calc_neutral_pep_mass="1523.762009" massdiff="0.987063" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1382">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7431 <modification_info modified_peptide="SAITQKIWSVYNN[115]">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7432 <mod_aminoacid_mass position="13" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7433 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7434 <search_score name="xcorr" value="0.620"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7435 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7436 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7437 <search_score name="spscore" value="5.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7438 <search_score name="sprank" value="4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7439 <search_score name="expect" value="1.78E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7440 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7441 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7442 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7443 <spectrum_query spectrum="201208-378803.00079.00079.3" spectrumNativeID="sample=1 period=1 cycle=1219 experiment=4" start_scan="79" end_scan="79" precursor_neutral_mass="1443.612982" assumed_charge="3" index="157" retention_time_sec="796.9">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7444 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7445 <search_hit hit_rank="1" peptide="MSLNNSSNVFLDS" peptide_prev_aa="-" peptide_next_aa="T" protein="gi|358414198|ref|XP_002700672.2|" num_tot_proteins="4" num_matched_ions="3" tot_num_ions="48" calc_neutral_pep_mass="1442.634744" massdiff="0.978238" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="408">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7446 <modification_info modified_peptide="M[147]SLNNSSNVFLDS">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7447 <mod_aminoacid_mass position="1" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7448 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7449 <search_score name="xcorr" value="0.741"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7450 <search_score name="deltacn" value="0.220"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7451 <search_score name="deltacnstar" value="0.118"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7452 <search_score name="spscore" value="11.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7453 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7454 <search_score name="expect" value="8.68E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7455 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7456 <search_hit hit_rank="2" peptide="MSLNNSSNVFLDS" peptide_prev_aa="-" peptide_next_aa="T" protein="gi|358414198|ref|XP_002700672.2|" num_tot_proteins="4" num_matched_ions="3" tot_num_ions="48" calc_neutral_pep_mass="1443.618760" massdiff="-0.005778" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="408">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7457 <modification_info modified_peptide="M[147]SLN[115]NSSNVFLDS">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7458 <mod_aminoacid_mass position="1" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7459 <mod_aminoacid_mass position="4" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7460 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7461 <search_score name="xcorr" value="0.654"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7462 <search_score name="deltacn" value="0.116"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7463 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7464 <search_score name="spscore" value="10.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7465 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7466 <search_score name="expect" value="1.54E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7467 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7468 <search_hit hit_rank="3" peptide="MSLNNSSNVFLDS" peptide_prev_aa="-" peptide_next_aa="T" protein="gi|358414198|ref|XP_002700672.2|" num_tot_proteins="4" num_matched_ions="3" tot_num_ions="48" calc_neutral_pep_mass="1443.618760" massdiff="-0.005778" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="408">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7469 <modification_info modified_peptide="M[147]SLNN[115]SSNVFLDS">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7470 <mod_aminoacid_mass position="1" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7471 <mod_aminoacid_mass position="5" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7472 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7473 <search_score name="xcorr" value="0.654"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7474 <search_score name="deltacn" value="0.116"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7475 <search_score name="deltacnstar" value="0.018"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7476 <search_score name="spscore" value="10.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7477 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7478 <search_score name="expect" value="1.54E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7479 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7480 <search_hit hit_rank="4" peptide="MSLNNSSNVFLDS" peptide_prev_aa="-" peptide_next_aa="T" protein="gi|358414198|ref|XP_002700672.2|" num_tot_proteins="4" num_matched_ions="3" tot_num_ions="48" calc_neutral_pep_mass="1444.602776" massdiff="-0.989794" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="408">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7481 <modification_info modified_peptide="M[147]SLN[115]N[115]SSNVFLDS">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7482 <mod_aminoacid_mass position="1" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7483 <mod_aminoacid_mass position="4" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7484 <mod_aminoacid_mass position="5" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7485 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7486 <search_score name="xcorr" value="0.642"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7487 <search_score name="deltacn" value="0.100"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7488 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7489 <search_score name="spscore" value="10.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7490 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7491 <search_score name="expect" value="1.67E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7492 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7493 <search_hit hit_rank="5" peptide="NRKQEESAEAGAPG" peptide_prev_aa="K" peptide_next_aa="G" protein="gi|528921178|ref|XP_592304.7|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="52" calc_neutral_pep_mass="1444.643016" massdiff="-1.030034" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="408">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7494 <modification_info modified_peptide="N[115]RKQ[129]EESAEAGAPG">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7495 <mod_aminoacid_mass position="1" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7496 <mod_aminoacid_mass position="4" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7497 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7498 <search_score name="xcorr" value="0.578"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7499 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7500 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7501 <search_score name="spscore" value="6.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7502 <search_score name="sprank" value="6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7503 <search_score name="expect" value="2.54E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7504 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7505 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7506 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7507 <spectrum_query spectrum="201208-378803.00079.00079.2" spectrumNativeID="sample=1 period=1 cycle=1219 experiment=4" start_scan="79" end_scan="79" precursor_neutral_mass="962.408655" assumed_charge="2" index="158" retention_time_sec="796.9">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7508 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7509 <search_hit hit_rank="1" peptide="SQENLENK" peptide_prev_aa="I" peptide_next_aa="E" protein="gi|528928354|ref|XP_005193233.1|" num_tot_proteins="1" num_matched_ions="3" tot_num_ions="14" calc_neutral_pep_mass="963.403287" massdiff="-0.994632" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="382">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7510 <modification_info modified_peptide="SQ[129]EN[115]LEN[115]K">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7511 <mod_aminoacid_mass position="2" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7512 <mod_aminoacid_mass position="4" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7513 <mod_aminoacid_mass position="7" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7514 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7515 <search_score name="xcorr" value="0.546"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7516 <search_score name="deltacn" value="0.106"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7517 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7518 <search_score name="spscore" value="22.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7519 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7520 <search_score name="expect" value="6.33E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7521 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7522 <search_hit hit_rank="2" peptide="SSGWNVDPT" peptide_prev_aa="K" peptide_next_aa="Q" protein="XXX_gi|358414198|ref|XP_002700672.2|" num_tot_proteins="4" num_matched_ions="1" tot_num_ions="16" calc_neutral_pep_mass="961.414125" massdiff="0.994530" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="382">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7523 <search_score name="xcorr" value="0.488"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7524 <search_score name="deltacn" value="0.067"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7525 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7526 <search_score name="spscore" value="3.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7527 <search_score name="sprank" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7528 <search_score name="expect" value="1.06E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7529 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7530 <search_hit hit_rank="3" peptide="SSGWNVDPT" peptide_prev_aa="K" peptide_next_aa="Q" protein="XXX_gi|358414198|ref|XP_002700672.2|" num_tot_proteins="4" num_matched_ions="1" tot_num_ions="16" calc_neutral_pep_mass="962.398141" massdiff="0.010514" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="382">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7531 <modification_info modified_peptide="SSGWN[115]VDPT">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7532 <mod_aminoacid_mass position="5" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7533 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7534 <search_score name="xcorr" value="0.488"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7535 <search_score name="deltacn" value="0.067"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7536 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7537 <search_score name="spscore" value="3.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7538 <search_score name="sprank" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7539 <search_score name="expect" value="1.06E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7540 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7541 <search_hit hit_rank="4" peptide="GGSAEGGGSQPG" peptide_prev_aa="R" peptide_next_aa="E" protein="XXX_gi|528961840|ref|XP_005211303.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="22" calc_neutral_pep_mass="959.394452" massdiff="3.014203" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="382">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7542 <search_score name="xcorr" value="0.455"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7543 <search_score name="deltacn" value="0.077"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7544 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7545 <search_score name="spscore" value="7.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7546 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7547 <search_score name="expect" value="1.43E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7548 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7549 <search_hit hit_rank="5" peptide="SQENLENK" peptide_prev_aa="I" peptide_next_aa="E" protein="gi|528928354|ref|XP_005193233.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="14" calc_neutral_pep_mass="962.419271" massdiff="-0.010616" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="382">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7550 <modification_info modified_peptide="SQ[129]ENLEN[115]K">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7551 <mod_aminoacid_mass position="2" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7552 <mod_aminoacid_mass position="7" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7553 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7554 <search_score name="xcorr" value="0.421"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7555 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7556 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7557 <search_score name="spscore" value="9.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7558 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7559 <search_score name="expect" value="1.95E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7560 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7561 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7562 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7563 <spectrum_query spectrum="201208-378803.00080.00080.3" spectrumNativeID="sample=1 period=1 cycle=1220 experiment=2" start_scan="80" end_scan="80" precursor_neutral_mass="1227.620988" assumed_charge="3" index="159" retention_time_sec="799.5">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7564 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7565 <search_hit hit_rank="1" peptide="QRVFQRVMF" peptide_prev_aa="-" peptide_next_aa="G" protein="XXX_gi|528920173|ref|XP_001788336.2|" num_tot_proteins="2" num_matched_ions="3" tot_num_ions="32" calc_neutral_pep_mass="1227.607014" massdiff="0.013974" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="546">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7566 <modification_info modified_peptide="Q[129]RVFQ[129]RVM[147]F">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7567 <mod_aminoacid_mass position="1" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7568 <mod_aminoacid_mass position="5" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7569 <mod_aminoacid_mass position="8" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7570 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7571 <search_score name="xcorr" value="0.565"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7572 <search_score name="deltacn" value="0.087"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7573 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7574 <search_score name="spscore" value="9.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7575 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7576 <search_score name="expect" value="3.78E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7577 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7578 <search_hit hit_rank="2" peptide="EQLSRLTPER" peptide_prev_aa="A" peptide_next_aa="N" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="36" calc_neutral_pep_mass="1228.641165" massdiff="-1.020177" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="546">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7579 <modification_info modified_peptide="EQ[129]LSRLTPER">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7580 <mod_aminoacid_mass position="2" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7581 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7582 <search_score name="xcorr" value="0.516"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7583 <search_score name="deltacn" value="0.141"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7584 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7585 <search_score name="spscore" value="11.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7586 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7587 <search_score name="expect" value="6.38E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7588 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7589 <search_hit hit_rank="3" peptide="QRVFQRVMF" peptide_prev_aa="-" peptide_next_aa="G" protein="XXX_gi|528920173|ref|XP_001788336.2|" num_tot_proteins="2" num_matched_ions="3" tot_num_ions="32" calc_neutral_pep_mass="1226.622998" massdiff="0.997990" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="546">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7590 <modification_info modified_peptide="Q[129]RVFQRVM[147]F">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7591 <mod_aminoacid_mass position="1" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7592 <mod_aminoacid_mass position="8" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7593 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7594 <search_score name="xcorr" value="0.443"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7595 <search_score name="deltacn" value="0.001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7596 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7597 <search_score name="spscore" value="9.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7598 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7599 <search_score name="expect" value="1.39E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7600 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7601 <search_hit hit_rank="4" peptide="DIRRFFDMK" peptide_prev_aa="V" peptide_next_aa="D" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="32" calc_neutral_pep_mass="1226.623013" massdiff="0.997976" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="546">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7602 <search_score name="xcorr" value="0.443"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7603 <search_score name="deltacn" value="0.038"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7604 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7605 <search_score name="spscore" value="4.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7606 <search_score name="sprank" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7607 <search_score name="expect" value="1.40E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7608 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7609 <search_hit hit_rank="5" peptide="EVGCGAPVPLVK" peptide_prev_aa="W" peptide_next_aa="C" protein="gi|528993971|ref|XP_005219929.1|" num_tot_proteins="4" num_matched_ions="2" tot_num_ions="44" calc_neutral_pep_mass="1225.637660" massdiff="1.983328" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="546">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7610 <modification_info modified_peptide="EVGCGAPVPLVK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7611 <mod_aminoacid_mass position="4" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7612 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7613 <search_score name="xcorr" value="0.426"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7614 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7615 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7616 <search_score name="spscore" value="1.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7617 <search_score name="sprank" value="15"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7618 <search_score name="expect" value="1.68E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7619 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7620 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7621 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7622 <spectrum_query spectrum="201208-378803.00080.00080.2" spectrumNativeID="sample=1 period=1 cycle=1220 experiment=2" start_scan="80" end_scan="80" precursor_neutral_mass="818.413992" assumed_charge="2" index="160" retention_time_sec="799.5">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7623 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7624 <search_hit hit_rank="1" peptide="MRPMLR" peptide_prev_aa="E" peptide_next_aa="L" protein="XXX_gi|528921178|ref|XP_592304.7|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="10" calc_neutral_pep_mass="818.425484" massdiff="-0.011492" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="840">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7625 <modification_info modified_peptide="MRPM[147]LR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7626 <mod_aminoacid_mass position="4" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7627 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7628 <search_score name="xcorr" value="0.430"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7629 <search_score name="deltacn" value="0.072"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7630 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7631 <search_score name="spscore" value="15.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7632 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7633 <search_score name="expect" value="7.26E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7634 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7635 <search_hit hit_rank="2" peptide="ALGISDNQ" peptide_prev_aa="R" peptide_next_aa="V" protein="XXX_gi|28849955|ref|NP_788795.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="14" calc_neutral_pep_mass="816.397747" massdiff="2.016245" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="840">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7636 <search_score name="xcorr" value="0.399"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7637 <search_score name="deltacn" value="0.022"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7638 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7639 <search_score name="spscore" value="4.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7640 <search_score name="sprank" value="9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7641 <search_score name="expect" value="1.07E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7642 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7643 <search_hit hit_rank="3" peptide="TAPDSQAK" peptide_prev_aa="I" peptide_next_aa="T" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="14" calc_neutral_pep_mass="816.397747" massdiff="2.016245" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="840">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7644 <search_score name="xcorr" value="0.390"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7645 <search_score name="deltacn" value="0.174"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7646 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7647 <search_score name="spscore" value="1.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7648 <search_score name="sprank" value="18"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7649 <search_score name="expect" value="1.19E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7650 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7651 <search_hit hit_rank="4" peptide="NMAPGLLT" peptide_prev_aa="K" peptide_next_aa="T" protein="gi|528908802|ref|XP_005199340.1|" num_tot_proteins="8" num_matched_ions="2" tot_num_ions="14" calc_neutral_pep_mass="816.405141" massdiff="2.008851" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="840">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7652 <modification_info modified_peptide="N[115]MAPGLLT">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7653 <mod_aminoacid_mass position="1" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7654 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7655 <search_score name="xcorr" value="0.322"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7656 <search_score name="deltacn" value="0.029"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7657 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7658 <search_score name="spscore" value="4.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7659 <search_score name="sprank" value="7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7660 <search_score name="expect" value="2.78E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7661 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7662 <search_hit hit_rank="5" peptide="DATVNGLK" peptide_prev_aa="D" peptide_next_aa="N" protein="XXX_gi|528935739|ref|XP_005201142.1|" num_tot_proteins="2" num_matched_ions="1" tot_num_ions="14" calc_neutral_pep_mass="817.418148" massdiff="0.995844" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="840">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7663 <modification_info modified_peptide="DATVN[115]GLK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7664 <mod_aminoacid_mass position="5" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7665 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7666 <search_score name="xcorr" value="0.313"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7667 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7668 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7669 <search_score name="spscore" value="1.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7670 <search_score name="sprank" value="14"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7671 <search_score name="expect" value="3.12E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7672 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7673 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7674 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7675 <spectrum_query spectrum="201208-378803.00081.00081.3" spectrumNativeID="sample=1 period=1 cycle=1221 experiment=2" start_scan="81" end_scan="81" precursor_neutral_mass="1235.029860" assumed_charge="3" index="161" retention_time_sec="802.1">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7676 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7677 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7678 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7679 <spectrum_query spectrum="201208-378803.00081.00081.2" spectrumNativeID="sample=1 period=1 cycle=1221 experiment=2" start_scan="81" end_scan="81" precursor_neutral_mass="823.353240" assumed_charge="2" index="162" retention_time_sec="802.1">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7680 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7681 <search_hit hit_rank="1" peptide="YSAENQL" peptide_prev_aa="K" peptide_next_aa="R" protein="XXX_gi|358418103|ref|XP_600387.4|" num_tot_proteins="4" num_matched_ions="1" tot_num_ions="12" calc_neutral_pep_mass="824.355214" massdiff="-1.001974" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="238">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7682 <modification_info modified_peptide="YSAEN[115]QL">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7683 <mod_aminoacid_mass position="5" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7684 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7685 <search_score name="xcorr" value="0.308"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7686 <search_score name="deltacn" value="0.091"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7687 <search_score name="deltacnstar" value="0.039"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7688 <search_score name="spscore" value="2.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7689 <search_score name="sprank" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7690 <search_score name="expect" value="1.62E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7691 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7692 <search_hit hit_rank="2" peptide="YSAENQL" peptide_prev_aa="K" peptide_next_aa="R" protein="XXX_gi|358418103|ref|XP_600387.4|" num_tot_proteins="4" num_matched_ions="1" tot_num_ions="12" calc_neutral_pep_mass="824.355214" massdiff="-1.001974" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="238">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7693 <modification_info modified_peptide="YSAENQ[129]L">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7694 <mod_aminoacid_mass position="6" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7695 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7696 <search_score name="xcorr" value="0.296"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7697 <search_score name="deltacn" value="0.054"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7698 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7699 <search_score name="spscore" value="2.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7700 <search_score name="sprank" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7701 <search_score name="expect" value="1.88E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7702 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7703 <search_hit hit_rank="3" peptide="PYVCRE" peptide_prev_aa="K" peptide_next_aa="C" protein="gi|528908812|ref|XP_609847.5|" num_tot_proteins="12" num_matched_ions="1" tot_num_ions="10" calc_neutral_pep_mass="823.353440" massdiff="-0.000200" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="238">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7704 <modification_info modified_peptide="PYVCRE">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7705 <mod_aminoacid_mass position="4" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7706 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7707 <search_score name="xcorr" value="0.280"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7708 <search_score name="deltacn" value="0.116"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7709 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7710 <search_score name="spscore" value="2.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7711 <search_score name="sprank" value="7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7712 <search_score name="expect" value="2.30E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7713 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7714 <search_hit hit_rank="4" peptide="QPVYDTT" peptide_prev_aa="K" peptide_next_aa="I" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="12" calc_neutral_pep_mass="823.359965" massdiff="-0.006725" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="238">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7715 <modification_info modified_peptide="Q[129]PVYDTT">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7716 <mod_aminoacid_mass position="1" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7717 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7718 <search_score name="xcorr" value="0.248"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7719 <search_score name="deltacn" value="0.011"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7720 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7721 <search_score name="spscore" value="1.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7722 <search_score name="sprank" value="10"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7723 <search_score name="expect" value="3.47E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7724 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7725 <search_hit hit_rank="5" peptide="YESNELA" peptide_prev_aa="R" peptide_next_aa="V" protein="XXX_gi|119924469|ref|XP_001252524.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="12" calc_neutral_pep_mass="824.355213" massdiff="-1.001973" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="238">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7726 <search_score name="xcorr" value="0.245"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7727 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7728 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7729 <search_score name="spscore" value="8.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7730 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7731 <search_score name="expect" value="3.58E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7732 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7733 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7734 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7735 <spectrum_query spectrum="201208-378803.00082.00082.2" spectrumNativeID="sample=1 period=1 cycle=1221 experiment=3" start_scan="82" end_scan="82" precursor_neutral_mass="1367.577760" assumed_charge="2" index="163" retention_time_sec="804.3">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7736 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7737 <search_hit hit_rank="1" peptide="LEDAMQAAVQYQ" peptide_prev_aa="K" peptide_next_aa="D" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="0" tot_num_ions="22" calc_neutral_pep_mass="1367.591498" massdiff="-0.013738" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="382">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7738 <modification_info modified_peptide="LEDAMQ[129]AAVQ[129]YQ">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7739 <mod_aminoacid_mass position="6" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7740 <mod_aminoacid_mass position="10" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7741 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7742 <search_score name="xcorr" value="0.544"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7743 <search_score name="deltacn" value="0.222"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7744 <search_score name="deltacnstar" value="0.143"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7745 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7746 <search_score name="sprank" value="11"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7747 <search_score name="expect" value="3.72E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7748 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7749 <search_hit hit_rank="2" peptide="LEDAMQAAVQYQ" peptide_prev_aa="K" peptide_next_aa="D" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="0" tot_num_ions="22" calc_neutral_pep_mass="1367.591498" massdiff="-0.013738" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="382">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7750 <modification_info modified_peptide="LEDAMQ[129]AAVQYQ[129]">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7751 <mod_aminoacid_mass position="6" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7752 <mod_aminoacid_mass position="12" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7753 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7754 <search_score name="xcorr" value="0.466"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7755 <search_score name="deltacn" value="0.092"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7756 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7757 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7758 <search_score name="sprank" value="11"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7759 <search_score name="expect" value="8.01E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7760 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7761 <search_hit hit_rank="3" peptide="NQGEDGFSTEER" peptide_prev_aa="Y" peptide_next_aa="F" protein="XXX_gi|358414198|ref|XP_002700672.2|" num_tot_proteins="4" num_matched_ions="2" tot_num_ions="22" calc_neutral_pep_mass="1367.558952" massdiff="0.018808" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="382">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7762 <search_score name="xcorr" value="0.423"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7763 <search_score name="deltacn" value="0.119"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7764 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7765 <search_score name="spscore" value="5.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7766 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7767 <search_score name="expect" value="1.23E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7768 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7769 <search_hit hit_rank="4" peptide="LEDAMQAAVQYQ" peptide_prev_aa="K" peptide_next_aa="D" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="0" tot_num_ions="22" calc_neutral_pep_mass="1367.591498" massdiff="-0.013738" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="382">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7770 <modification_info modified_peptide="LEDAMQAAVQ[129]YQ[129]">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7771 <mod_aminoacid_mass position="10" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7772 <mod_aminoacid_mass position="12" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7773 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7774 <search_score name="xcorr" value="0.373"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7775 <search_score name="deltacn" value="0.027"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7776 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7777 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7778 <search_score name="sprank" value="11"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7779 <search_score name="expect" value="2.01E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7780 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7781 <search_hit hit_rank="5" peptide="GYYSVLCQVMF" peptide_prev_aa="-" peptide_next_aa="P" protein="XXX_gi|528993971|ref|XP_005219929.1|" num_tot_proteins="2" num_matched_ions="2" tot_num_ions="20" calc_neutral_pep_mass="1366.593747" massdiff="0.984013" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="382">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7782 <modification_info modified_peptide="GYYSVLCQVMF">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7783 <mod_aminoacid_mass position="7" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7784 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7785 <search_score name="xcorr" value="0.363"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7786 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7787 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7788 <search_score name="spscore" value="10.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7789 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7790 <search_score name="expect" value="2.22E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7791 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7792 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7793 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7794 <spectrum_query spectrum="201208-378803.00082.00082.3" spectrumNativeID="sample=1 period=1 cycle=1221 experiment=3" start_scan="82" end_scan="82" precursor_neutral_mass="2051.366640" assumed_charge="3" index="164" retention_time_sec="804.3">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7795 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7796 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7797 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7798 <spectrum_query spectrum="201208-378803.00083.00083.2" spectrumNativeID="sample=1 period=1 cycle=1222 experiment=2" start_scan="83" end_scan="83" precursor_neutral_mass="1162.555923" assumed_charge="2" index="165" retention_time_sec="807.0">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7799 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7800 <search_hit hit_rank="1" peptide="VIDEGLMDEK" peptide_prev_aa="E" peptide_next_aa="L" protein="gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="18" calc_neutral_pep_mass="1163.537991" massdiff="-0.982067" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="1074">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7801 <modification_info modified_peptide="VIDEGLM[147]DEK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7802 <mod_aminoacid_mass position="7" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7803 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7804 <search_score name="xcorr" value="0.771"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7805 <search_score name="deltacn" value="0.384"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7806 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7807 <search_score name="spscore" value="8.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7808 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7809 <search_score name="expect" value="1.00E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7810 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7811 <search_hit hit_rank="2" peptide="TLNGASMIAMVG" peptide_prev_aa="R" peptide_next_aa="L" protein="XXX_gi|528920173|ref|XP_001788336.2|" num_tot_proteins="2" num_matched_ions="1" tot_num_ions="22" calc_neutral_pep_mass="1163.567865" massdiff="-1.011942" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="1074">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7812 <search_score name="xcorr" value="0.475"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7813 <search_score name="deltacn" value="0.267"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7814 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7815 <search_score name="spscore" value="1.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7816 <search_score name="sprank" value="9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7817 <search_score name="expect" value="7.69E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7818 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7819 <search_hit hit_rank="3" peptide="QETQQALQSK" peptide_prev_aa="Q" peptide_next_aa="T" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="18" calc_neutral_pep_mass="1162.535364" massdiff="0.020560" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="1074">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7820 <modification_info modified_peptide="QETQ[129]Q[129]ALQ[129]SK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7821 <mod_aminoacid_mass position="4" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7822 <mod_aminoacid_mass position="5" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7823 <mod_aminoacid_mass position="8" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7824 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7825 <search_score name="xcorr" value="0.348"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7826 <search_score name="deltacn" value="0.049"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7827 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7828 <search_score name="spscore" value="2.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7829 <search_score name="sprank" value="6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7830 <search_score name="expect" value="3.09E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7831 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7832 <search_hit hit_rank="4" peptide="LVPWIEDCK" peptide_prev_aa="D" peptide_next_aa="A" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="16" calc_neutral_pep_mass="1159.558347" massdiff="2.997576" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="1074">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7833 <modification_info modified_peptide="LVPWIEDCK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7834 <mod_aminoacid_mass position="8" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7835 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7836 <search_score name="xcorr" value="0.331"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7837 <search_score name="deltacn" value="0.027"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7838 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7839 <search_score name="spscore" value="3.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7840 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7841 <search_score name="expect" value="3.72E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7842 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7843 <search_hit hit_rank="5" peptide="ALIAEHQTFM" peptide_prev_aa="K" peptide_next_aa="E" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="18" calc_neutral_pep_mass="1160.553596" massdiff="2.002327" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="1074">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7844 <modification_info modified_peptide="ALIAEHQ[129]TFM">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7845 <mod_aminoacid_mass position="7" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7846 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7847 <search_score name="xcorr" value="0.322"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7848 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7849 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7850 <search_score name="spscore" value="0.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7851 <search_score name="sprank" value="16"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7852 <search_score name="expect" value="4.11E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7853 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7854 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7855 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7856 <spectrum_query spectrum="201208-378803.00083.00083.3" spectrumNativeID="sample=1 period=1 cycle=1222 experiment=2" start_scan="83" end_scan="83" precursor_neutral_mass="1743.833885" assumed_charge="3" index="166" retention_time_sec="807.0">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7857 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7858 <search_hit hit_rank="1" peptide="YAAELHLVHWNTKY" peptide_prev_aa="K" peptide_next_aa="G" protein="gi|30466252|ref|NP_848667.1|" num_tot_proteins="1" num_matched_ions="5" tot_num_ions="52" calc_neutral_pep_mass="1744.857306" massdiff="-1.023421" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1386">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7859 <modification_info modified_peptide="YAAELHLVHWN[115]TKY">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7860 <mod_aminoacid_mass position="11" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7861 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7862 <search_score name="xcorr" value="0.678"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7863 <search_score name="deltacn" value="0.049"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7864 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7865 <search_score name="spscore" value="5.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7866 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7867 <search_score name="expect" value="3.33E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7868 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7869 <search_hit hit_rank="2" peptide="NKPEGSVVMFGGVDHR" peptide_prev_aa="T" peptide_next_aa="Y" protein="gi|28849951|ref|NP_788787.1|" num_tot_proteins="1" num_matched_ions="5" tot_num_ions="60" calc_neutral_pep_mass="1744.820254" massdiff="-0.986369" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1386">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7870 <modification_info modified_peptide="N[115]KPEGSVVM[147]FGGVDHR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7871 <mod_aminoacid_mass position="1" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7872 <mod_aminoacid_mass position="9" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7873 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7874 <search_score name="xcorr" value="0.644"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7875 <search_score name="deltacn" value="0.135"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7876 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7877 <search_score name="spscore" value="3.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7878 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7879 <search_score name="expect" value="4.62E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7880 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7881 <search_hit hit_rank="3" peptide="GRELSDALQMHPMVK" peptide_prev_aa="D" peptide_next_aa="F" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="56" calc_neutral_pep_mass="1742.844346" massdiff="0.989540" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1386">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7882 <modification_info modified_peptide="GRELSDALQM[147]HPM[147]VK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7883 <mod_aminoacid_mass position="10" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7884 <mod_aminoacid_mass position="13" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7885 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7886 <search_score name="xcorr" value="0.557"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7887 <search_score name="deltacn" value="0.030"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7888 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7889 <search_score name="spscore" value="0.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7890 <search_score name="sprank" value="28"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7891 <search_score name="expect" value="1.09E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7892 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7893 <search_hit hit_rank="4" peptide="PGQAEDSRVLSEQLSQ" peptide_prev_aa="K" peptide_next_aa="Q" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="60" calc_neutral_pep_mass="1743.827522" massdiff="0.006363" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1386">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7894 <modification_info modified_peptide="PGQAEDSRVLSEQLSQ[129]">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7895 <mod_aminoacid_mass position="16" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7896 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7897 <search_score name="xcorr" value="0.541"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7898 <search_score name="deltacn" value="0.028"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7899 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7900 <search_score name="spscore" value="1.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7901 <search_score name="sprank" value="11"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7902 <search_score name="expect" value="1.27E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7903 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7904 <search_hit hit_rank="5" peptide="ATDETDRDIIREPLT" peptide_prev_aa="K" peptide_next_aa="E" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="56" calc_neutral_pep_mass="1743.863908" massdiff="-0.030022" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="1386">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7905 <search_score name="xcorr" value="0.525"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7906 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7907 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7908 <search_score name="spscore" value="1.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7909 <search_score name="sprank" value="8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7910 <search_score name="expect" value="1.48E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7911 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7912 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7913 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7914 <spectrum_query spectrum="201208-378803.00084.00084.2" spectrumNativeID="sample=1 period=1 cycle=1223 experiment=2" start_scan="84" end_scan="84" precursor_neutral_mass="1219.507293" assumed_charge="2" index="167" retention_time_sec="809.6">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7915 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7916 <search_hit hit_rank="1" peptide="AYSAHFCSFK" peptide_prev_aa="N" peptide_next_aa="S" protein="XXX_gi|358414198|ref|XP_002700672.2|" num_tot_proteins="4" num_matched_ions="1" tot_num_ions="18" calc_neutral_pep_mass="1217.517545" massdiff="1.989748" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="234">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7917 <modification_info modified_peptide="AYSAHFCSFK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7918 <mod_aminoacid_mass position="7" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7919 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7920 <search_score name="xcorr" value="0.303"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7921 <search_score name="deltacn" value="0.171"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7922 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7923 <search_score name="spscore" value="1.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7924 <search_score name="sprank" value="4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7925 <search_score name="expect" value="9.86E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7926 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7927 <search_hit hit_rank="2" peptide="AECGHSFRQK" peptide_prev_aa="C" peptide_next_aa="V" protein="gi|528908812|ref|XP_609847.5|" num_tot_proteins="12" num_matched_ions="1" tot_num_ions="18" calc_neutral_pep_mass="1220.524422" massdiff="-1.017129" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="234">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7928 <modification_info modified_peptide="AECGHSFRQ[129]K">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7929 <mod_aminoacid_mass position="3" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7930 <mod_aminoacid_mass position="9" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7931 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7932 <search_score name="xcorr" value="0.252"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7933 <search_score name="deltacn" value="0.039"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7934 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7935 <search_score name="spscore" value="1.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7936 <search_score name="sprank" value="4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7937 <search_score name="expect" value="2.07E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7938 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7939 <search_hit hit_rank="3" peptide="QRCGTFGDMK" peptide_prev_aa="-" peptide_next_aa="M" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="2" num_matched_ions="1" tot_num_ions="18" calc_neutral_pep_mass="1216.485244" massdiff="3.022049" num_tol_term="2" num_missed_cleavages="1" num_matched_peptides="234">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7940 <modification_info modified_peptide="Q[129]RCGTFGDM[147]K">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7941 <mod_aminoacid_mass position="1" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7942 <mod_aminoacid_mass position="3" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7943 <mod_aminoacid_mass position="9" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7944 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7945 <search_score name="xcorr" value="0.242"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7946 <search_score name="deltacn" value="0.037"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7947 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7948 <search_score name="spscore" value="1.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7949 <search_score name="sprank" value="4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7950 <search_score name="expect" value="2.38E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7951 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7952 <search_hit hit_rank="4" peptide="SEDNPMNQDLG" peptide_prev_aa="M" peptide_next_aa="-" protein="XXX_gi|139948503|ref|NP_001077142.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="20" calc_neutral_pep_mass="1218.482281" massdiff="1.025012" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="234">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7953 <search_score name="xcorr" value="0.233"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7954 <search_score name="deltacn" value="0.007"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7955 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7956 <search_score name="spscore" value="1.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7957 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7958 <search_score name="expect" value="2.71E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7959 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7960 <search_hit hit_rank="5" peptide="GCYHRDFHK" peptide_prev_aa="S" peptide_next_aa="C" protein="XXX_gi|528968221|ref|XP_005212615.1|" num_tot_proteins="2" num_matched_ions="1" tot_num_ions="16" calc_neutral_pep_mass="1219.519276" massdiff="-0.011983" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="234">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7961 <modification_info modified_peptide="GCYHRDFHK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7962 <mod_aminoacid_mass position="2" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7963 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7964 <search_score name="xcorr" value="0.231"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7965 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7966 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7967 <search_score name="spscore" value="1.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7968 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7969 <search_score name="expect" value="2.77E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7970 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7971 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7972 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7973 <spectrum_query spectrum="201208-378803.00084.00084.3" spectrumNativeID="sample=1 period=1 cycle=1223 experiment=2" start_scan="84" end_scan="84" precursor_neutral_mass="1829.260940" assumed_charge="3" index="168" retention_time_sec="809.6">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7974 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7975 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7976 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7977 <spectrum_query spectrum="201208-378803.00085.00085.3" spectrumNativeID="sample=1 period=1 cycle=1223 experiment=3" start_scan="85" end_scan="85" precursor_neutral_mass="1431.709140" assumed_charge="3" index="169" retention_time_sec="811.7">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7978 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7979 <search_hit hit_rank="1" peptide="QVEQMRSLVAQK" peptide_prev_aa="L" peptide_next_aa="E" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="44" calc_neutral_pep_mass="1432.734399" massdiff="-1.025259" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1494">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7980 <modification_info modified_peptide="Q[129]VEQM[147]RSLVAQK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7981 <mod_aminoacid_mass position="1" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7982 <mod_aminoacid_mass position="5" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7983 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7984 <search_score name="xcorr" value="0.695"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7985 <search_score name="deltacn" value="0.048"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7986 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7987 <search_score name="spscore" value="5.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7988 <search_score name="sprank" value="6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7989 <search_score name="expect" value="1.31E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7990 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7991 <search_hit hit_rank="2" peptide="DFPIANGERQSPV" peptide_prev_aa="K" peptide_next_aa="D" protein="gi|30466252|ref|NP_848667.1|" num_tot_proteins="1" num_matched_ions="3" tot_num_ions="48" calc_neutral_pep_mass="1428.699743" massdiff="3.009397" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1494">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7992 <search_score name="xcorr" value="0.662"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7993 <search_score name="deltacn" value="0.022"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7994 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7995 <search_score name="spscore" value="6.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7996 <search_score name="sprank" value="4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7997 <search_score name="expect" value="1.70E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7998 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
7999 <search_hit hit_rank="3" peptide="TVCGKSVERQHK" peptide_prev_aa="D" peptide_next_aa="L" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="44" calc_neutral_pep_mass="1429.698363" massdiff="2.010777" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="1494">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8000 <modification_info modified_peptide="TVCGKSVERQ[129]HK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8001 <mod_aminoacid_mass position="3" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8002 <mod_aminoacid_mass position="10" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8003 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8004 <search_score name="xcorr" value="0.647"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8005 <search_score name="deltacn" value="0.028"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8006 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8007 <search_score name="spscore" value="2.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8008 <search_score name="sprank" value="15"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8009 <search_score name="expect" value="1.90E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8010 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8011 <search_hit hit_rank="4" peptide="ALTNAGLNIAPCGR" peptide_prev_aa="S" peptide_next_aa="L" protein="gi|358418103|ref|XP_600387.4|" num_tot_proteins="4" num_matched_ions="2" tot_num_ions="52" calc_neutral_pep_mass="1429.687131" massdiff="2.022010" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="1494">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8012 <modification_info modified_peptide="ALTN[115]AGLN[115]IAPCGR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8013 <mod_aminoacid_mass position="4" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8014 <mod_aminoacid_mass position="8" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8015 <mod_aminoacid_mass position="12" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8016 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8017 <search_score name="xcorr" value="0.629"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8018 <search_score name="deltacn" value="0.049"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8019 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8020 <search_score name="spscore" value="4.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8021 <search_score name="sprank" value="9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8022 <search_score name="expect" value="2.20E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8023 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8024 <search_hit hit_rank="5" peptide="LNTVKDQLNEMK" peptide_prev_aa="D" peptide_next_aa="E" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="44" calc_neutral_pep_mass="1432.723181" massdiff="-1.014041" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1494">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8025 <modification_info modified_peptide="LN[115]TVKDQLNEMK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8026 <mod_aminoacid_mass position="2" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8027 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8028 <search_score name="xcorr" value="0.598"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8029 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8030 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8031 <search_score name="spscore" value="2.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8032 <search_score name="sprank" value="15"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8033 <search_score name="expect" value="2.80E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8034 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8035 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8036 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8037 <spectrum_query spectrum="201208-378803.00085.00085.2" spectrumNativeID="sample=1 period=1 cycle=1223 experiment=3" start_scan="85" end_scan="85" precursor_neutral_mass="954.472760" assumed_charge="2" index="170" retention_time_sec="811.7">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8038 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8039 <search_hit hit_rank="1" peptide="LASFCPRT" peptide_prev_aa="R" peptide_next_aa="P" protein="XXX_gi|30794280|ref|NP_851335.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="14" calc_neutral_pep_mass="951.448403" massdiff="3.024357" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="418">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8040 <modification_info modified_peptide="LASFCPRT">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8041 <mod_aminoacid_mass position="5" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8042 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8043 <search_score name="xcorr" value="0.493"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8044 <search_score name="deltacn" value="0.109"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8045 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8046 <search_score name="spscore" value="19.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8047 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8048 <search_score name="expect" value="1.35E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8049 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8050 <search_hit hit_rank="2" peptide="ALQEHIDK" peptide_prev_aa="L" peptide_next_aa="N" protein="XXX_gi|358414198|ref|XP_002700672.2|" num_tot_proteins="4" num_matched_ions="1" tot_num_ions="14" calc_neutral_pep_mass="953.481811" massdiff="0.990949" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="418">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8051 <modification_info modified_peptide="ALQ[129]EHIDK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8052 <mod_aminoacid_mass position="3" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8053 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8054 <search_score name="xcorr" value="0.439"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8055 <search_score name="deltacn" value="0.181"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8056 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8057 <search_score name="spscore" value="7.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8058 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8059 <search_score name="expect" value="2.69E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8060 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8061 <search_hit hit_rank="3" peptide="VNEPFYGK" peptide_prev_aa="G" peptide_next_aa="A" protein="XXX_gi|528921178|ref|XP_592304.7|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="14" calc_neutral_pep_mass="952.465432" massdiff="2.007328" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="418">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8062 <search_score name="xcorr" value="0.360"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8063 <search_score name="deltacn" value="0.043"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8064 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8065 <search_score name="spscore" value="1.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8066 <search_score name="sprank" value="8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8067 <search_score name="expect" value="7.48E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8068 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8069 <search_hit hit_rank="4" peptide="NELTEFAK" peptide_prev_aa="V" peptide_next_aa="T" protein="gi|30794280|ref|NP_851335.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="14" calc_neutral_pep_mass="951.454928" massdiff="3.017832" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="418">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8070 <modification_info modified_peptide="N[115]ELTEFAK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8071 <mod_aminoacid_mass position="1" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8072 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8073 <search_score name="xcorr" value="0.344"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8074 <search_score name="deltacn" value="0.108"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8075 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8076 <search_score name="spscore" value="1.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8077 <search_score name="sprank" value="8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8078 <search_score name="expect" value="9.11E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8079 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8080 <search_hit hit_rank="5" peptide="RIYLDQM" peptide_prev_aa="K" peptide_next_aa="G" protein="gi|528928354|ref|XP_005193233.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="12" calc_neutral_pep_mass="953.464038" massdiff="1.008722" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="418">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8081 <modification_info modified_peptide="RIYLDQM[147]">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8082 <mod_aminoacid_mass position="7" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8083 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8084 <search_score name="xcorr" value="0.307"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8085 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8086 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8087 <search_score name="spscore" value="7.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8088 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8089 <search_score name="expect" value="1.47E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8090 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8091 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8092 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8093 <spectrum_query spectrum="201208-378803.00086.00086.3" spectrumNativeID="sample=1 period=1 cycle=1224 experiment=2" start_scan="86" end_scan="86" precursor_neutral_mass="1725.858220" assumed_charge="3" index="171" retention_time_sec="814.4">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8094 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8095 <search_hit hit_rank="1" peptide="AIDQDPQNGSALLRSH" peptide_prev_aa="K" peptide_next_aa="F" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="60" calc_neutral_pep_mass="1722.817292" massdiff="3.040928" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1878">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8096 <modification_info modified_peptide="AIDQ[129]DPQN[115]GSALLRSH">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8097 <mod_aminoacid_mass position="4" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8098 <mod_aminoacid_mass position="8" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8099 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8100 <search_score name="xcorr" value="0.705"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8101 <search_score name="deltacn" value="0.097"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8102 <search_score name="deltacnstar" value="0.001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8103 <search_score name="spscore" value="5.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8104 <search_score name="sprank" value="7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8105 <search_score name="expect" value="1.86E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8106 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8107 <search_hit hit_rank="2" peptide="AIDQDPQNGSALLRSH" peptide_prev_aa="K" peptide_next_aa="F" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="60" calc_neutral_pep_mass="1722.817292" massdiff="3.040928" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1878">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8108 <modification_info modified_peptide="AIDQ[129]DPQ[129]NGSALLRSH">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8109 <mod_aminoacid_mass position="4" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8110 <mod_aminoacid_mass position="7" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8111 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8112 <search_score name="xcorr" value="0.704"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8113 <search_score name="deltacn" value="0.096"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8114 <search_score name="deltacnstar" value="0.093"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8115 <search_score name="spscore" value="5.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8116 <search_score name="sprank" value="7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8117 <search_score name="expect" value="1.87E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8118 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8119 <search_hit hit_rank="3" peptide="AIDQDPQNGSALLRSH" peptide_prev_aa="K" peptide_next_aa="F" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="60" calc_neutral_pep_mass="1722.817292" massdiff="3.040928" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1878">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8120 <modification_info modified_peptide="AIDQDPQ[129]N[115]GSALLRSH">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8121 <mod_aminoacid_mass position="7" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8122 <mod_aminoacid_mass position="8" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8123 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8124 <search_score name="xcorr" value="0.639"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8125 <search_score name="deltacn" value="0.003"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8126 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8127 <search_score name="spscore" value="5.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8128 <search_score name="sprank" value="7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8129 <search_score name="expect" value="3.06E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8130 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8131 <search_hit hit_rank="4" peptide="LNAARSHEQLLENLI" peptide_prev_aa="R" peptide_next_aa="V" protein="XXX_gi|358414198|ref|XP_002700672.2|" num_tot_proteins="4" num_matched_ions="4" tot_num_ions="56" calc_neutral_pep_mass="1722.878830" massdiff="2.979390" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1878">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8132 <modification_info modified_peptide="LN[115]AARSHEQ[129]LLEN[115]LI">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8133 <mod_aminoacid_mass position="2" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8134 <mod_aminoacid_mass position="9" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8135 <mod_aminoacid_mass position="13" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8136 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8137 <search_score name="xcorr" value="0.637"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8138 <search_score name="deltacn" value="0.064"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8139 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8140 <search_score name="spscore" value="10.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8141 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8142 <search_score name="expect" value="3.10E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8143 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8144 <search_hit hit_rank="5" peptide="SLNLVLMNKANELEH" peptide_prev_aa="R" peptide_next_aa="N" protein="XXX_gi|528921178|ref|XP_592304.7|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="56" calc_neutral_pep_mass="1725.860737" massdiff="-0.002517" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1878">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8145 <modification_info modified_peptide="SLNLVLMN[115]KAN[115]ELEH">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8146 <mod_aminoacid_mass position="8" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8147 <mod_aminoacid_mass position="11" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8148 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8149 <search_score name="xcorr" value="0.596"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8150 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8151 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8152 <search_score name="spscore" value="5.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8153 <search_score name="sprank" value="8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8154 <search_score name="expect" value="4.21E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8155 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8156 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8157 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8158 <spectrum_query spectrum="201208-378803.00086.00086.2" spectrumNativeID="sample=1 period=1 cycle=1224 experiment=2" start_scan="86" end_scan="86" precursor_neutral_mass="1150.572147" assumed_charge="2" index="172" retention_time_sec="814.4">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8159 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8160 <search_hit hit_rank="1" peptide="APLTEIENYV" peptide_prev_aa="K" peptide_next_aa="G" protein="gi|358414198|ref|XP_002700672.2|" num_tot_proteins="4" num_matched_ions="1" tot_num_ions="18" calc_neutral_pep_mass="1147.576105" massdiff="2.996042" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="814">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8161 <search_score name="xcorr" value="0.621"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8162 <search_score name="deltacn" value="0.248"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8163 <search_score name="deltacnstar" value="0.237"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8164 <search_score name="spscore" value="1.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8165 <search_score name="sprank" value="25"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8166 <search_score name="expect" value="4.09E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8167 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8168 <search_hit hit_rank="2" peptide="APLTEIENYV" peptide_prev_aa="K" peptide_next_aa="G" protein="gi|358414198|ref|XP_002700672.2|" num_tot_proteins="4" num_matched_ions="1" tot_num_ions="18" calc_neutral_pep_mass="1148.560121" massdiff="2.012026" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="814">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8169 <modification_info modified_peptide="APLTEIEN[115]YV">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8170 <mod_aminoacid_mass position="8" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8171 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8172 <search_score name="xcorr" value="0.473"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8173 <search_score name="deltacn" value="0.014"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8174 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8175 <search_score name="spscore" value="1.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8176 <search_score name="sprank" value="25"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8177 <search_score name="expect" value="1.68E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8178 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8179 <search_hit hit_rank="3" peptide="LQSYLEMHK" peptide_prev_aa="T" peptide_next_aa="A" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="16" calc_neutral_pep_mass="1148.553596" massdiff="2.018551" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="814">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8180 <modification_info modified_peptide="LQ[129]SYLEMHK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8181 <mod_aminoacid_mass position="2" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8182 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8183 <search_score name="xcorr" value="0.467"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8184 <search_score name="deltacn" value="0.003"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8185 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8186 <search_score name="spscore" value="12.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8187 <search_score name="sprank" value="4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8188 <search_score name="expect" value="1.79E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8189 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8190 <search_hit hit_rank="4" peptide="TRVLNQYEQ" peptide_prev_aa="K" peptide_next_aa="L" protein="gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="3" tot_num_ions="16" calc_neutral_pep_mass="1149.577836" massdiff="0.994310" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="814">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8191 <search_score name="xcorr" value="0.465"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8192 <search_score name="deltacn" value="0.079"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8193 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8194 <search_score name="spscore" value="16.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8195 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8196 <search_score name="expect" value="1.82E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8197 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8198 <search_hit hit_rank="5" peptide="LPENNKGYGR" peptide_prev_aa="K" peptide_next_aa="G" protein="XXX_gi|358414198|ref|XP_002700672.2|" num_tot_proteins="4" num_matched_ions="3" tot_num_ions="18" calc_neutral_pep_mass="1147.562187" massdiff="3.009960" num_tol_term="2" num_missed_cleavages="1" num_matched_peptides="814">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8199 <modification_info modified_peptide="LPEN[115]NKGYGR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8200 <mod_aminoacid_mass position="4" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8201 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8202 <search_score name="xcorr" value="0.428"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8203 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8204 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8205 <search_score name="spscore" value="9.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8206 <search_score name="sprank" value="6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8207 <search_score name="expect" value="2.59E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8208 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8209 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8210 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8211 <spectrum_query spectrum="201208-378803.00087.00087.3" spectrumNativeID="sample=1 period=1 cycle=1225 experiment=2" start_scan="87" end_scan="87" precursor_neutral_mass="1649.161878" assumed_charge="3" index="173" retention_time_sec="817.0">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8212 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8213 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8214 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8215 <spectrum_query spectrum="201208-378803.00087.00087.2" spectrumNativeID="sample=1 period=1 cycle=1225 experiment=2" start_scan="87" end_scan="87" precursor_neutral_mass="1099.441252" assumed_charge="2" index="174" retention_time_sec="817.0">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8216 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8217 <search_hit hit_rank="1" peptide="DMVTQFMET" peptide_prev_aa="R" peptide_next_aa="A" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="16" calc_neutral_pep_mass="1100.451833" massdiff="-1.010581" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="180">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8218 <search_score name="xcorr" value="0.504"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8219 <search_score name="deltacn" value="0.115"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8220 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8221 <search_score name="spscore" value="14.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8222 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8223 <search_score name="expect" value="3.73E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8224 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8225 <search_hit hit_rank="2" peptide="AEDEPEWPQ" peptide_prev_aa="R" peptide_next_aa="P" protein="gi|358418103|ref|XP_600387.4|" num_tot_proteins="4" num_matched_ions="1" tot_num_ions="16" calc_neutral_pep_mass="1100.429835" massdiff="-0.988584" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="180">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8226 <modification_info modified_peptide="AEDEPEWPQ[129]">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8227 <mod_aminoacid_mass position="9" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8228 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8229 <search_score name="xcorr" value="0.447"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8230 <search_score name="deltacn" value="0.407"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8231 <search_score name="deltacnstar" value="0.180"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8232 <search_score name="spscore" value="1.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8233 <search_score name="sprank" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8234 <search_score name="expect" value="6.64E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8235 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8236 <search_hit hit_rank="3" peptide="AEDEPEWPQ" peptide_prev_aa="R" peptide_next_aa="P" protein="gi|358418103|ref|XP_600387.4|" num_tot_proteins="4" num_matched_ions="1" tot_num_ions="16" calc_neutral_pep_mass="1099.445819" massdiff="-0.004568" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="180">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8237 <search_score name="xcorr" value="0.366"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8238 <search_score name="deltacn" value="0.277"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8239 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8240 <search_score name="spscore" value="1.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8241 <search_score name="sprank" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8242 <search_score name="expect" value="1.48E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8243 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8244 <search_hit hit_rank="4" peptide="EMFQTVMDT" peptide_prev_aa="R" peptide_next_aa="A" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="16" calc_neutral_pep_mass="1100.451833" massdiff="-1.010581" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="180">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8245 <search_score name="xcorr" value="0.265"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8246 <search_score name="deltacn" value="0.270"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8247 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8248 <search_score name="spscore" value="6.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8249 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8250 <search_score name="expect" value="4.08E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8251 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8252 <search_hit hit_rank="5" peptide="NQIDDQLDH" peptide_prev_aa="K" peptide_next_aa="A" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="0" tot_num_ions="16" calc_neutral_pep_mass="1098.446548" massdiff="0.994703" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="180">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8253 <modification_info modified_peptide="NQ[129]IDDQ[129]LDH">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8254 <mod_aminoacid_mass position="2" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8255 <mod_aminoacid_mass position="6" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8256 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8257 <search_score name="xcorr" value="0.193"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8258 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8259 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8260 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8261 <search_score name="sprank" value="10"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8262 <search_score name="expect" value="8.34E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8263 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8264 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8265 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8266 <spectrum_query spectrum="201208-378803.00088.00088.2" spectrumNativeID="sample=1 period=1 cycle=1228 experiment=2" start_scan="88" end_scan="88" precursor_neutral_mass="999.376058" assumed_charge="2" index="175" retention_time_sec="820.7">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8267 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8268 <search_hit hit_rank="1" peptide="DTNCIFPQ" peptide_prev_aa="K" peptide_next_aa="E" protein="gi|528928354|ref|XP_005193233.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="14" calc_neutral_pep_mass="996.374630" massdiff="3.001429" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="138">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8269 <modification_info modified_peptide="DTN[115]CIFPQ[129]">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8270 <mod_aminoacid_mass position="3" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8271 <mod_aminoacid_mass position="4" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8272 <mod_aminoacid_mass position="8" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8273 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8274 <search_score name="xcorr" value="0.295"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8275 <search_score name="deltacn" value="0.110"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8276 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8277 <search_score name="spscore" value="1.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8278 <search_score name="sprank" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8279 <search_score name="expect" value="8.80E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8280 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8281 <search_hit hit_rank="2" peptide="ATLSSEMMN" peptide_prev_aa="K" peptide_next_aa="G" protein="gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="16" calc_neutral_pep_mass="999.388884" massdiff="-0.012825" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="138">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8282 <modification_info modified_peptide="ATLSSEMM[147]N[115]">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8283 <mod_aminoacid_mass position="8" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8284 <mod_aminoacid_mass position="9" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8285 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8286 <search_score name="xcorr" value="0.263"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8287 <search_score name="deltacn" value="0.060"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8288 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8289 <search_score name="spscore" value="1.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8290 <search_score name="sprank" value="6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8291 <search_score name="expect" value="1.45E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8292 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8293 <search_hit hit_rank="3" peptide="DQSDDYEK" peptide_prev_aa="V" peptide_next_aa="A" protein="XXX_gi|30466252|ref|NP_848667.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="14" calc_neutral_pep_mass="999.366901" massdiff="0.009158" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="138">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8294 <modification_info modified_peptide="DQ[129]SDDYEK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8295 <mod_aminoacid_mass position="2" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8296 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8297 <search_score name="xcorr" value="0.247"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8298 <search_score name="deltacn" value="0.008"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8299 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8300 <search_score name="spscore" value="1.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8301 <search_score name="sprank" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8302 <search_score name="expect" value="1.86E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8303 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8304 <search_hit hit_rank="4" peptide="YHFNCMQ" peptide_prev_aa="K" peptide_next_aa="G" protein="XXX_gi|528968106|ref|XP_005212568.1|" num_tot_proteins="4" num_matched_ions="2" tot_num_ions="12" calc_neutral_pep_mass="999.357873" massdiff="0.018185" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="138">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8305 <modification_info modified_peptide="YHFNCMQ">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8306 <mod_aminoacid_mass position="5" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8307 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8308 <search_score name="xcorr" value="0.245"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8309 <search_score name="deltacn" value="0.045"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8310 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8311 <search_score name="spscore" value="6.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8312 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8313 <search_score name="expect" value="1.92E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8314 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8315 <search_hit hit_rank="5" peptide="CQQCVFPG" peptide_prev_aa="R" peptide_next_aa="R" protein="XXX_gi|528908812|ref|XP_609847.5|" num_tot_proteins="12" num_matched_ions="1" tot_num_ions="14" calc_neutral_pep_mass="997.352120" massdiff="2.023938" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="138">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8316 <modification_info modified_peptide="CQQ[129]CVFPG">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8317 <mod_aminoacid_mass position="1" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8318 <mod_aminoacid_mass position="3" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8319 <mod_aminoacid_mass position="4" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8320 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8321 <search_score name="xcorr" value="0.234"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8322 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8323 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8324 <search_score name="spscore" value="1.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8325 <search_score name="sprank" value="4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8326 <search_score name="expect" value="2.28E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8327 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8328 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8329 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8330 <spectrum_query spectrum="201208-378803.00088.00088.3" spectrumNativeID="sample=1 period=1 cycle=1228 experiment=2" start_scan="88" end_scan="88" precursor_neutral_mass="1499.064088" assumed_charge="3" index="176" retention_time_sec="820.7">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8331 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8332 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8333 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8334 <spectrum_query spectrum="201208-378803.00089.00089.3" spectrumNativeID="sample=1 period=1 cycle=1228 experiment=3" start_scan="89" end_scan="89" precursor_neutral_mass="1815.802638" assumed_charge="3" index="177" retention_time_sec="822.8">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8335 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8336 <search_hit hit_rank="1" peptide="AFQECERVDLNFQR" peptide_prev_aa="Q" peptide_next_aa="S" protein="XXX_gi|528968108|ref|XP_005212569.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="52" calc_neutral_pep_mass="1812.810099" massdiff="2.992539" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="734">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8337 <modification_info modified_peptide="AFQECERVDLNFQ[129]R">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8338 <mod_aminoacid_mass position="5" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8339 <mod_aminoacid_mass position="13" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8340 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8341 <search_score name="xcorr" value="0.659"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8342 <search_score name="deltacn" value="0.068"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8343 <search_score name="deltacnstar" value="0.003"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8344 <search_score name="spscore" value="2.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8345 <search_score name="sprank" value="15"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8346 <search_score name="expect" value="1.64E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8347 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8348 <search_hit hit_rank="2" peptide="AFQECERVDLNFQR" peptide_prev_aa="Q" peptide_next_aa="S" protein="XXX_gi|528968108|ref|XP_005212569.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="52" calc_neutral_pep_mass="1812.810099" massdiff="2.992539" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="734">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8349 <modification_info modified_peptide="AFQECERVDLN[115]FQR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8350 <mod_aminoacid_mass position="5" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8351 <mod_aminoacid_mass position="11" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8352 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8353 <search_score name="xcorr" value="0.656"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8354 <search_score name="deltacn" value="0.065"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8355 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8356 <search_score name="spscore" value="2.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8357 <search_score name="sprank" value="15"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8358 <search_score name="expect" value="1.67E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8359 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8360 <search_hit hit_rank="3" peptide="TMWDYDALQLFQDIG" peptide_prev_aa="K" peptide_next_aa="D" protein="XXX_gi|528968108|ref|XP_005212569.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="56" calc_neutral_pep_mass="1816.786569" massdiff="-0.983931" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="734">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8361 <modification_info modified_peptide="TMWDYDALQ[129]LFQ[129]DIG">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8362 <mod_aminoacid_mass position="9" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8363 <mod_aminoacid_mass position="12" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8364 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8365 <search_score name="xcorr" value="0.614"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8366 <search_score name="deltacn" value="0.035"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8367 <search_score name="deltacnstar" value="0.002"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8368 <search_score name="spscore" value="7.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8369 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8370 <search_score name="expect" value="2.23E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8371 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8372 <search_hit hit_rank="4" peptide="TMWDYDALQLFQDIG" peptide_prev_aa="K" peptide_next_aa="D" protein="XXX_gi|528968108|ref|XP_005212569.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="56" calc_neutral_pep_mass="1815.802553" massdiff="0.000085" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="734">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8373 <modification_info modified_peptide="TMWDYDALQLFQ[129]DIG">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8374 <mod_aminoacid_mass position="12" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8375 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8376 <search_score name="xcorr" value="0.612"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8377 <search_score name="deltacn" value="0.032"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8378 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8379 <search_score name="spscore" value="7.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8380 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8381 <search_score name="expect" value="2.25E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8382 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8383 <search_hit hit_rank="5" peptide="AFQECERVDLNFQR" peptide_prev_aa="Q" peptide_next_aa="S" protein="XXX_gi|528968108|ref|XP_005212569.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="52" calc_neutral_pep_mass="1813.794115" massdiff="2.008523" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="734">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8384 <modification_info modified_peptide="AFQECERVDLN[115]FQ[129]R">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8385 <mod_aminoacid_mass position="5" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8386 <mod_aminoacid_mass position="11" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8387 <mod_aminoacid_mass position="13" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8388 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8389 <search_score name="xcorr" value="0.592"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8390 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8391 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8392 <search_score name="spscore" value="2.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8393 <search_score name="sprank" value="15"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8394 <search_score name="expect" value="2.58E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8395 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8396 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8397 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8398 <spectrum_query spectrum="201208-378803.00089.00089.2" spectrumNativeID="sample=1 period=1 cycle=1228 experiment=3" start_scan="89" end_scan="89" precursor_neutral_mass="1210.535092" assumed_charge="2" index="178" retention_time_sec="822.8">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8399 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8400 <search_hit hit_rank="1" peptide="TQLSETEMRP" peptide_prev_aa="K" peptide_next_aa="N" protein="gi|528928354|ref|XP_005193233.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="18" calc_neutral_pep_mass="1207.539054" massdiff="2.996038" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="740">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8401 <modification_info modified_peptide="TQ[129]LSETEM[147]RP">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8402 <mod_aminoacid_mass position="2" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8403 <mod_aminoacid_mass position="8" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8404 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8405 <search_score name="xcorr" value="0.553"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8406 <search_score name="deltacn" value="0.014"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8407 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8408 <search_score name="spscore" value="15.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8409 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8410 <search_score name="expect" value="4.19E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8411 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8412 <search_hit hit_rank="2" peptide="TEDSSSQMTPK" peptide_prev_aa="E" peptide_next_aa="G" protein="gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="20" calc_neutral_pep_mass="1209.518332" massdiff="1.016760" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="740">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8413 <search_score name="xcorr" value="0.546"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8414 <search_score name="deltacn" value="0.127"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8415 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8416 <search_score name="spscore" value="15.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8417 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8418 <search_score name="expect" value="4.54E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8419 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8420 <search_hit hit_rank="3" peptide="PQQSARGVTEH" peptide_prev_aa="K" peptide_next_aa="S" protein="gi|528961840|ref|XP_005211303.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="20" calc_neutral_pep_mass="1210.557830" massdiff="-0.022738" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="740">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8421 <modification_info modified_peptide="PQ[129]Q[129]SARGVTEH">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8422 <mod_aminoacid_mass position="2" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8423 <mod_aminoacid_mass position="3" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8424 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8425 <search_score name="xcorr" value="0.476"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8426 <search_score name="deltacn" value="0.128"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8427 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8428 <search_score name="spscore" value="11.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8429 <search_score name="sprank" value="4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8430 <search_score name="expect" value="9.18E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8431 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8432 <search_hit hit_rank="4" peptide="TRLDMFEQR" peptide_prev_aa="T" peptide_next_aa="Y" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="16" calc_neutral_pep_mass="1211.560458" massdiff="-1.025366" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="740">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8433 <modification_info modified_peptide="TRLDM[147]FEQ[129]R">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8434 <mod_aminoacid_mass position="5" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8435 <mod_aminoacid_mass position="8" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8436 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8437 <search_score name="xcorr" value="0.415"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8438 <search_score name="deltacn" value="0.055"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8439 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8440 <search_score name="spscore" value="24.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8441 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8442 <search_score name="expect" value="1.70E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8443 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8444 <search_hit hit_rank="5" peptide="AQQTEQKGCR" peptide_prev_aa="L" peptide_next_aa="A" protein="gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="18" calc_neutral_pep_mass="1207.513917" massdiff="3.021175" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="740">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8445 <modification_info modified_peptide="AQ[129]Q[129]TEQKGCR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8446 <mod_aminoacid_mass position="2" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8447 <mod_aminoacid_mass position="3" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8448 <mod_aminoacid_mass position="9" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8449 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8450 <search_score name="xcorr" value="0.392"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8451 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8452 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8453 <search_score name="spscore" value="7.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8454 <search_score name="sprank" value="8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8455 <search_score name="expect" value="2.15E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8456 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8457 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8458 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8459 <spectrum_query spectrum="201208-378803.00090.00090.3" spectrumNativeID="sample=1 period=1 cycle=1229 experiment=2" start_scan="90" end_scan="90" precursor_neutral_mass="1565.046264" assumed_charge="3" index="179" retention_time_sec="825.5">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8460 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8461 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8462 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8463 <spectrum_query spectrum="201208-378803.00090.00090.2" spectrumNativeID="sample=1 period=1 cycle=1229 experiment=2" start_scan="90" end_scan="90" precursor_neutral_mass="1043.364176" assumed_charge="2" index="180" retention_time_sec="825.5">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8464 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8465 <search_hit hit_rank="1" peptide="SQQYEQAAD" peptide_prev_aa="R" peptide_next_aa="A" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="4" tot_num_ions="16" calc_neutral_pep_mass="1041.377466" massdiff="1.986710" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="100">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8466 <modification_info modified_peptide="SQ[129]Q[129]YEQ[129]AAD">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8467 <mod_aminoacid_mass position="2" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8468 <mod_aminoacid_mass position="3" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8469 <mod_aminoacid_mass position="6" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8470 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8471 <search_score name="xcorr" value="0.360"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8472 <search_score name="deltacn" value="0.134"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8473 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8474 <search_score name="spscore" value="18.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8475 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8476 <search_score name="expect" value="4.63E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8477 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8478 <search_hit hit_rank="2" peptide="DEAQCCEK" peptide_prev_aa="Q" peptide_next_aa="G" protein="XXX_gi|30794280|ref|NP_851335.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="14" calc_neutral_pep_mass="1040.342677" massdiff="3.021499" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="100">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8479 <modification_info modified_peptide="DEAQCCEK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8480 <mod_aminoacid_mass position="5" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8481 <mod_aminoacid_mass position="6" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8482 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8483 <search_score name="xcorr" value="0.312"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8484 <search_score name="deltacn" value="0.031"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8485 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8486 <search_score name="spscore" value="5.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8487 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8488 <search_score name="expect" value="8.99E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8489 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8490 <search_hit hit_rank="3" peptide="AAQEYQQSD" peptide_prev_aa="R" peptide_next_aa="A" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="0" tot_num_ions="16" calc_neutral_pep_mass="1041.377466" massdiff="1.986710" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="100">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8491 <modification_info modified_peptide="AAQ[129]EYQ[129]Q[129]SD">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8492 <mod_aminoacid_mass position="3" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8493 <mod_aminoacid_mass position="6" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8494 <mod_aminoacid_mass position="7" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8495 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8496 <search_score name="xcorr" value="0.302"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8497 <search_score name="deltacn" value="0.259"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8498 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8499 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8500 <search_score name="sprank" value="9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8501 <search_score name="expect" value="1.03E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8502 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8503 <search_hit hit_rank="4" peptide="ECCQAEDK" peptide_prev_aa="Q" peptide_next_aa="G" protein="gi|30794280|ref|NP_851335.1|" num_tot_proteins="1" num_matched_ions="3" tot_num_ions="14" calc_neutral_pep_mass="1040.342677" massdiff="3.021499" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="100">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8504 <modification_info modified_peptide="ECCQAEDK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8505 <mod_aminoacid_mass position="2" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8506 <mod_aminoacid_mass position="3" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8507 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8508 <search_score name="xcorr" value="0.224"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8509 <search_score name="deltacn" value="0.086"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8510 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8511 <search_score name="spscore" value="9.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8512 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8513 <search_score name="expect" value="3.00E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8514 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8515 <search_hit hit_rank="5" peptide="EFQPCLSC" peptide_prev_aa="K" peptide_next_aa="P" protein="gi|528908812|ref|XP_609847.5|" num_tot_proteins="12" num_matched_ions="1" tot_num_ions="14" calc_neutral_pep_mass="1041.378335" massdiff="1.985842" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="100">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8516 <modification_info modified_peptide="EFQPCLSC">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8517 <mod_aminoacid_mass position="5" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8518 <mod_aminoacid_mass position="8" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8519 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8520 <search_score name="xcorr" value="0.205"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8521 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8522 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8523 <search_score name="spscore" value="1.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8524 <search_score name="sprank" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8525 <search_score name="expect" value="3.90E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8526 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8527 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8528 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8529 <spectrum_query spectrum="201208-378803.00091.00091.2" spectrumNativeID="sample=1 period=1 cycle=1229 experiment=3" start_scan="91" end_scan="91" precursor_neutral_mass="1419.590851" assumed_charge="2" index="181" retention_time_sec="827.6">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8530 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8531 <search_hit hit_rank="1" peptide="LNPEEGQMVEEK" peptide_prev_aa="E" peptide_next_aa="Y" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="22" calc_neutral_pep_mass="1419.607528" massdiff="-0.016677" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="302">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8532 <modification_info modified_peptide="LN[115]PEEGQ[129]M[147]VEEK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8533 <mod_aminoacid_mass position="2" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8534 <mod_aminoacid_mass position="7" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8535 <mod_aminoacid_mass position="8" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8536 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8537 <search_score name="xcorr" value="0.308"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8538 <search_score name="deltacn" value="0.080"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8539 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8540 <search_score name="spscore" value="8.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8541 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8542 <search_score name="expect" value="1.01E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8543 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8544 <search_hit hit_rank="2" peptide="PAPEPPWHCGDR" peptide_prev_aa="P" peptide_next_aa="G" protein="gi|528961840|ref|XP_005211303.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="22" calc_neutral_pep_mass="1418.603734" massdiff="0.987117" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="302">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8545 <modification_info modified_peptide="PAPEPPWHCGDR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8546 <mod_aminoacid_mass position="9" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8547 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8548 <search_score name="xcorr" value="0.283"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8549 <search_score name="deltacn" value="0.129"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8550 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8551 <search_score name="spscore" value="12.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8552 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8553 <search_score name="expect" value="1.48E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8554 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8555 <search_hit hit_rank="3" peptide="IAHSQPAEMSCGK" peptide_prev_aa="L" peptide_next_aa="G" protein="gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="24" calc_neutral_pep_mass="1416.601352" massdiff="2.989499" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="302">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8556 <modification_info modified_peptide="IAHSQ[129]PAEMSCGK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8557 <mod_aminoacid_mass position="5" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8558 <mod_aminoacid_mass position="11" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8559 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8560 <search_score name="xcorr" value="0.247"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8561 <search_score name="deltacn" value="0.003"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8562 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8563 <search_score name="spscore" value="2.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8564 <search_score name="sprank" value="7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8565 <search_score name="expect" value="2.61E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8566 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8567 <search_hit hit_rank="4" peptide="CTPQGYDALYTK" peptide_prev_aa="S" peptide_next_aa="Y" protein="XXX_gi|528968106|ref|XP_005212568.1|" num_tot_proteins="2" num_matched_ions="2" tot_num_ions="22" calc_neutral_pep_mass="1417.607148" massdiff="1.983703" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="302">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8568 <modification_info modified_peptide="CTPQ[129]GYDALYTK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8569 <mod_aminoacid_mass position="1" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8570 <mod_aminoacid_mass position="4" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8571 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8572 <search_score name="xcorr" value="0.246"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8573 <search_score name="deltacn" value="0.029"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8574 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8575 <search_score name="spscore" value="7.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8576 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8577 <search_score name="expect" value="2.64E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8578 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8579 <search_hit hit_rank="5" peptide="QGAEGGGSAEGGGSQPA" peptide_prev_aa="R" peptide_next_aa="G" protein="XXX_gi|528961840|ref|XP_005211303.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="32" calc_neutral_pep_mass="1417.559346" massdiff="2.031505" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="302">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8580 <modification_info modified_peptide="Q[129]GAEGGGSAEGGGSQ[129]PA">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8581 <mod_aminoacid_mass position="1" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8582 <mod_aminoacid_mass position="15" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8583 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8584 <search_score name="xcorr" value="0.239"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8585 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8586 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8587 <search_score name="spscore" value="1.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8588 <search_score name="sprank" value="14"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8589 <search_score name="expect" value="2.95E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8590 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8591 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8592 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8593 <spectrum_query spectrum="201208-378803.00091.00091.3" spectrumNativeID="sample=1 period=1 cycle=1229 experiment=3" start_scan="91" end_scan="91" precursor_neutral_mass="2129.386276" assumed_charge="3" index="182" retention_time_sec="827.6">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8594 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8595 <search_hit hit_rank="1" peptide="PVAVLLLLLIIGVMVIIWR" peptide_prev_aa="T" peptide_next_aa="Q" protein="gi|528920173|ref|XP_001788336.2|" num_tot_proteins="2" num_matched_ions="1" tot_num_ions="72" calc_neutral_pep_mass="2130.373047" massdiff="-0.986770" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="4">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8596 <search_score name="xcorr" value="0.096"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8597 <search_score name="deltacn" value="0.542"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8598 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8599 <search_score name="spscore" value="0.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8600 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8601 <search_score name="expect" value="1.92E+002"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8602 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8603 <search_hit hit_rank="2" peptide="WIIVMVGIILLLLLVAVPR" peptide_prev_aa="T" peptide_next_aa="Q" protein="XXX_gi|528920173|ref|XP_001788336.2|" num_tot_proteins="2" num_matched_ions="1" tot_num_ions="72" calc_neutral_pep_mass="2130.373047" massdiff="-0.986770" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="4">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8604 <search_score name="xcorr" value="0.044"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8605 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8606 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8607 <search_score name="spscore" value="0.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8608 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8609 <search_score name="expect" value="4.34E+002"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8610 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8611 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8612 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8613 <spectrum_query spectrum="201208-378803.00092.00092.2" spectrumNativeID="sample=1 period=1 cycle=1229 experiment=4" start_scan="92" end_scan="92" precursor_neutral_mass="1663.688616" assumed_charge="2" index="183" retention_time_sec="829.7">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8614 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8615 <search_hit hit_rank="1" peptide="VLCQCALSQEPEAR" peptide_prev_aa="S" peptide_next_aa="T" protein="XXX_gi|87196497|ref|NP_776354.2|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="26" calc_neutral_pep_mass="1663.706940" massdiff="-0.018324" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="224">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8616 <modification_info modified_peptide="VLCQ[129]CALSQ[129]EPEAR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8617 <mod_aminoacid_mass position="3" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8618 <mod_aminoacid_mass position="4" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8619 <mod_aminoacid_mass position="5" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8620 <mod_aminoacid_mass position="9" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8621 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8622 <search_score name="xcorr" value="0.736"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8623 <search_score name="deltacn" value="0.455"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8624 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8625 <search_score name="spscore" value="7.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8626 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8627 <search_score name="expect" value="1.00E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8628 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8629 <search_hit hit_rank="2" peptide="KMMETFCDELSVR" peptide_prev_aa="V" peptide_next_aa="S" protein="gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="24" calc_neutral_pep_mass="1661.709901" massdiff="1.978715" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="224">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8630 <modification_info modified_peptide="KM[147]METFCDELSVR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8631 <mod_aminoacid_mass position="2" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8632 <mod_aminoacid_mass position="7" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8633 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8634 <search_score name="xcorr" value="0.401"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8635 <search_score name="deltacn" value="0.283"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8636 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8637 <search_score name="spscore" value="9.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8638 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8639 <search_score name="expect" value="1.00E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8640 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8641 <search_hit hit_rank="3" peptide="IISEESSSVHEMTNS" peptide_prev_aa="K" peptide_next_aa="Q" protein="XXX_gi|27806963|ref|NP_776953.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="28" calc_neutral_pep_mass="1664.719931" massdiff="-1.031315" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="224">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8642 <modification_info modified_peptide="IISEESSSVHEM[147]TNS">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8643 <mod_aminoacid_mass position="12" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8644 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8645 <search_score name="xcorr" value="0.288"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8646 <search_score name="deltacn" value="0.262"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8647 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8648 <search_score name="spscore" value="1.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8649 <search_score name="sprank" value="6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8650 <search_score name="expect" value="7.31E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8651 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8652 <search_hit hit_rank="4" peptide="KMMETFCDELSVR" peptide_prev_aa="V" peptide_next_aa="S" protein="gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="24" calc_neutral_pep_mass="1661.709901" massdiff="1.978715" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="224">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8653 <modification_info modified_peptide="KMM[147]ETFCDELSVR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8654 <mod_aminoacid_mass position="3" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8655 <mod_aminoacid_mass position="7" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8656 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8657 <search_score name="xcorr" value="0.212"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8658 <search_score name="deltacn" value="0.007"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8659 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8660 <search_score name="spscore" value="1.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8661 <search_score name="sprank" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8662 <search_score name="expect" value="2.74E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8663 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8664 <search_hit hit_rank="5" peptide="QPPSNMHETLDGYR" peptide_prev_aa="L" peptide_next_aa="K" protein="gi|528968108|ref|XP_005212569.1|" num_tot_proteins="4" num_matched_ions="0" tot_num_ions="26" calc_neutral_pep_mass="1661.699136" massdiff="1.989479" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="224">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8665 <modification_info modified_peptide="Q[129]PPSN[115]M[147]HETLDGYR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8666 <mod_aminoacid_mass position="1" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8667 <mod_aminoacid_mass position="5" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8668 <mod_aminoacid_mass position="6" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8669 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8670 <search_score name="xcorr" value="0.211"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8671 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8672 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8673 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8674 <search_score name="sprank" value="8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8675 <search_score name="expect" value="2.81E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8676 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8677 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8678 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8679 <spectrum_query spectrum="201208-378803.00092.00092.3" spectrumNativeID="sample=1 period=1 cycle=1229 experiment=4" start_scan="92" end_scan="92" precursor_neutral_mass="2495.532923" assumed_charge="3" index="184" retention_time_sec="829.7">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8680 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8681 <search_hit hit_rank="1" peptide="MKRLPLIVICESLAVLGLLVLK" peptide_prev_aa="W" peptide_next_aa="T" protein="XXX_gi|28849955|ref|NP_788795.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="84" calc_neutral_pep_mass="2494.499432" massdiff="1.033491" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="2">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8682 <modification_info modified_peptide="M[147]KRLPLIVICESLAVLGLLVLK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8683 <mod_aminoacid_mass position="1" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8684 <mod_aminoacid_mass position="10" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8685 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8686 <search_score name="xcorr" value="0.170"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8687 <search_score name="deltacn" value="0.979"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8688 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8689 <search_score name="spscore" value="0.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8690 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8691 <search_score name="expect" value="1.02E+002"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8692 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8693 <search_hit hit_rank="2" peptide="LVLLGLVALSECIVILPLRKMK" peptide_prev_aa="W" peptide_next_aa="T" protein="gi|28849955|ref|NP_788795.1|" num_tot_proteins="1" num_matched_ions="0" tot_num_ions="84" calc_neutral_pep_mass="2494.499432" massdiff="1.033491" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="2">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8694 <modification_info modified_peptide="LVLLGLVALSECIVILPLRKM[147]K">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8695 <mod_aminoacid_mass position="12" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8696 <mod_aminoacid_mass position="21" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8697 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8698 <search_score name="xcorr" value="0.004"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8699 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8700 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8701 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8702 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8703 <search_score name="expect" value="5.74E+002"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8704 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8705 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8706 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8707 <spectrum_query spectrum="201208-378803.00093.00093.2" spectrumNativeID="sample=1 period=1 cycle=1229 experiment=5" start_scan="93" end_scan="93" precursor_neutral_mass="1265.530040" assumed_charge="2" index="185" retention_time_sec="831.8">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8708 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8709 <search_hit hit_rank="1" peptide="MAEAESLETAAE" peptide_prev_aa="K" peptide_next_aa="H" protein="gi|528968104|ref|XP_005212567.1|" num_tot_proteins="4" num_matched_ions="2" tot_num_ions="22" calc_neutral_pep_mass="1266.528548" massdiff="-0.998508" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="338">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8710 <modification_info modified_peptide="M[147]AEAESLETAAE">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8711 <mod_aminoacid_mass position="1" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8712 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8713 <search_score name="xcorr" value="0.319"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8714 <search_score name="deltacn" value="0.280"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8715 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8716 <search_score name="spscore" value="7.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8717 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8718 <search_score name="expect" value="3.74E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8719 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8720 <search_hit hit_rank="2" peptide="QYMQPNILNQ" peptide_prev_aa="R" peptide_next_aa="L" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="18" calc_neutral_pep_mass="1266.543805" massdiff="-1.013765" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="338">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8721 <modification_info modified_peptide="Q[129]YM[147]Q[129]PNILN[115]Q">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8722 <mod_aminoacid_mass position="1" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8723 <mod_aminoacid_mass position="3" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8724 <mod_aminoacid_mass position="4" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8725 <mod_aminoacid_mass position="9" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8726 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8727 <search_score name="xcorr" value="0.230"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8728 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8729 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8730 <search_score name="spscore" value="4.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8731 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8732 <search_score name="expect" value="1.78E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8733 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8734 <search_hit hit_rank="3" peptide="QYMQPNILNQ" peptide_prev_aa="R" peptide_next_aa="L" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="18" calc_neutral_pep_mass="1266.543805" massdiff="-1.013765" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="338">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8735 <modification_info modified_peptide="Q[129]YM[147]Q[129]PNILNQ[129]">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8736 <mod_aminoacid_mass position="1" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8737 <mod_aminoacid_mass position="3" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8738 <mod_aminoacid_mass position="4" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8739 <mod_aminoacid_mass position="10" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8740 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8741 <search_score name="xcorr" value="0.230"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8742 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8743 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8744 <search_score name="spscore" value="4.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8745 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8746 <search_score name="expect" value="1.78E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8747 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8748 <search_hit hit_rank="4" peptide="QYMQPNILNQ" peptide_prev_aa="R" peptide_next_aa="L" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="18" calc_neutral_pep_mass="1266.543805" massdiff="-1.013765" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="338">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8749 <modification_info modified_peptide="QYM[147]Q[129]PN[115]ILNQ[129]">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8750 <mod_aminoacid_mass position="3" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8751 <mod_aminoacid_mass position="4" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8752 <mod_aminoacid_mass position="6" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8753 <mod_aminoacid_mass position="10" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8754 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8755 <search_score name="xcorr" value="0.229"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8756 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8757 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8758 <search_score name="spscore" value="4.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8759 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8760 <search_score name="expect" value="1.81E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8761 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8762 <search_hit hit_rank="5" peptide="QYMQPNILNQ" peptide_prev_aa="R" peptide_next_aa="L" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="18" calc_neutral_pep_mass="1266.543805" massdiff="-1.013765" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="338">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8763 <modification_info modified_peptide="QYM[147]Q[129]PN[115]ILN[115]Q">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8764 <mod_aminoacid_mass position="3" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8765 <mod_aminoacid_mass position="4" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8766 <mod_aminoacid_mass position="6" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8767 <mod_aminoacid_mass position="9" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8768 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8769 <search_score name="xcorr" value="0.229"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8770 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8771 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8772 <search_score name="spscore" value="4.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8773 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8774 <search_score name="expect" value="1.81E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8775 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8776 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8777 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8778 <spectrum_query spectrum="201208-378803.00093.00093.3" spectrumNativeID="sample=1 period=1 cycle=1229 experiment=5" start_scan="93" end_scan="93" precursor_neutral_mass="1898.295060" assumed_charge="3" index="186" retention_time_sec="831.8">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8779 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8780 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8781 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8782 <spectrum_query spectrum="201208-378803.00094.00094.2" spectrumNativeID="sample=1 period=1 cycle=1230 experiment=2" start_scan="94" end_scan="94" precursor_neutral_mass="1626.721854" assumed_charge="2" index="187" retention_time_sec="834.5">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8783 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8784 <search_hit hit_rank="1" peptide="HEQLRQQQEEMR" peptide_prev_aa="D" peptide_next_aa="Q" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="22" calc_neutral_pep_mass="1627.737253" massdiff="-1.015398" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="888">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8785 <modification_info modified_peptide="HEQ[129]LRQQQEEM[147]R">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8786 <mod_aminoacid_mass position="3" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8787 <mod_aminoacid_mass position="11" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8788 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8789 <search_score name="xcorr" value="0.465"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8790 <search_score name="deltacn" value="0.001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8791 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8792 <search_score name="spscore" value="8.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8793 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8794 <search_score name="expect" value="1.95E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8795 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8796 <search_hit hit_rank="2" peptide="CHWPPEPAPPPSPVG" peptide_prev_aa="R" peptide_next_aa="D" protein="XXX_gi|528961840|ref|XP_005211303.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="28" calc_neutral_pep_mass="1624.734414" massdiff="1.987440" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="888">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8797 <modification_info modified_peptide="CHWPPEPAPPPSPVG">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8798 <mod_aminoacid_mass position="1" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8799 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8800 <search_score name="xcorr" value="0.465"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8801 <search_score name="deltacn" value="0.018"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8802 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8803 <search_score name="spscore" value="1.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8804 <search_score name="sprank" value="10"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8805 <search_score name="expect" value="1.96E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8806 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8807 <search_hit hit_rank="3" peptide="QAAMPTWGAGSPSPDR" peptide_prev_aa="G" peptide_next_aa="F" protein="gi|528961840|ref|XP_005211303.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="30" calc_neutral_pep_mass="1627.741290" massdiff="-1.019435" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="888">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8808 <search_score name="xcorr" value="0.457"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8809 <search_score name="deltacn" value="0.004"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8810 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8811 <search_score name="spscore" value="5.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8812 <search_score name="sprank" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8813 <search_score name="expect" value="2.10E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8814 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8815 <search_hit hit_rank="4" peptide="NQQPSLDQAHESIR" peptide_prev_aa="L" peptide_next_aa="Q" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="26" calc_neutral_pep_mass="1624.732894" massdiff="1.988960" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="888">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8816 <modification_info modified_peptide="N[115]QQ[129]PSLDQ[129]AHESIR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8817 <mod_aminoacid_mass position="1" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8818 <mod_aminoacid_mass position="3" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8819 <mod_aminoacid_mass position="8" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8820 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8821 <search_score name="xcorr" value="0.455"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8822 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8823 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8824 <search_score name="spscore" value="7.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8825 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8826 <search_score name="expect" value="2.13E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8827 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8828 <search_hit hit_rank="5" peptide="NQQPSLDQAHESIR" peptide_prev_aa="L" peptide_next_aa="Q" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="26" calc_neutral_pep_mass="1624.732894" massdiff="1.988960" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="888">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8829 <modification_info modified_peptide="NQ[129]Q[129]PSLDQ[129]AHESIR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8830 <mod_aminoacid_mass position="2" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8831 <mod_aminoacid_mass position="3" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8832 <mod_aminoacid_mass position="8" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8833 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8834 <search_score name="xcorr" value="0.455"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8835 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8836 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8837 <search_score name="spscore" value="7.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8838 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8839 <search_score name="expect" value="2.13E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8840 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8841 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8842 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8843 <spectrum_query spectrum="201208-378803.00094.00094.3" spectrumNativeID="sample=1 period=1 cycle=1230 experiment=2" start_scan="94" end_scan="94" precursor_neutral_mass="2440.082782" assumed_charge="3" index="188" retention_time_sec="834.5">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8844 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8845 <search_hit hit_rank="1" peptide="RLETMNQCWESVLQKTEER" peptide_prev_aa="S" peptide_next_aa="E" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="72" calc_neutral_pep_mass="2438.120610" massdiff="1.962171" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="834">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8846 <modification_info modified_peptide="RLETMNQ[129]CWESVLQKTEER">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8847 <mod_aminoacid_mass position="7" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8848 <mod_aminoacid_mass position="8" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8849 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8850 <search_score name="xcorr" value="0.718"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8851 <search_score name="deltacn" value="0.165"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8852 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8853 <search_score name="spscore" value="5.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8854 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8855 <search_score name="expect" value="7.24E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8856 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8857 <search_hit hit_rank="2" peptide="RLETMNQCWESVLQKTEER" peptide_prev_aa="S" peptide_next_aa="E" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="72" calc_neutral_pep_mass="2438.120610" massdiff="1.962171" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="834">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8858 <modification_info modified_peptide="RLETMN[115]QCWESVLQKTEER">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8859 <mod_aminoacid_mass position="6" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8860 <mod_aminoacid_mass position="8" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8861 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8862 <search_score name="xcorr" value="0.718"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8863 <search_score name="deltacn" value="0.165"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8864 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8865 <search_score name="spscore" value="5.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8866 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8867 <search_score name="expect" value="7.24E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8868 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8869 <search_hit hit_rank="3" peptide="PVQCESDVIMYIQECEGLIR" peptide_prev_aa="Q" peptide_next_aa="Q" protein="gi|528944676|ref|XP_005204734.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="76" calc_neutral_pep_mass="2441.080052" massdiff="-0.997270" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="834">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8870 <modification_info modified_peptide="PVQ[129]CESDVIMYIQECEGLIR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8871 <mod_aminoacid_mass position="3" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8872 <mod_aminoacid_mass position="4" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8873 <mod_aminoacid_mass position="15" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8874 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8875 <search_score name="xcorr" value="0.599"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8876 <search_score name="deltacn" value="0.055"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8877 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8878 <search_score name="spscore" value="2.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8879 <search_score name="sprank" value="6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8880 <search_score name="expect" value="1.72E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8881 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8882 <search_hit hit_rank="4" peptide="GIAGMGDLEDDLDALQSFMERR" peptide_prev_aa="V" peptide_next_aa="D" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="84" calc_neutral_pep_mass="2438.120609" massdiff="1.962172" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="834">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8883 <search_score name="xcorr" value="0.566"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8884 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8885 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8886 <search_score name="spscore" value="4.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8887 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8888 <search_score name="expect" value="2.19E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8889 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8890 <search_hit hit_rank="5" peptide="GIAGMGDLEDDLDALQSFMERR" peptide_prev_aa="V" peptide_next_aa="D" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="84" calc_neutral_pep_mass="2439.104625" massdiff="0.978156" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="834">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8891 <modification_info modified_peptide="GIAGMGDLEDDLDALQ[129]SFMERR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8892 <mod_aminoacid_mass position="16" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8893 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8894 <search_score name="xcorr" value="0.564"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8895 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8896 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8897 <search_score name="spscore" value="4.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8898 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8899 <search_score name="expect" value="2.23E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8900 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8901 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8902 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8903 <spectrum_query spectrum="201208-378803.00095.00095.3" spectrumNativeID="sample=1 period=1 cycle=1230 experiment=3" start_scan="95" end_scan="95" precursor_neutral_mass="1836.731935" assumed_charge="3" index="189" retention_time_sec="836.6">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8904 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8905 <search_hit hit_rank="1" peptide="YLLFCMENSAEPEQS" peptide_prev_aa="K" peptide_next_aa="L" protein="gi|528969819|ref|XP_005213230.1|" num_tot_proteins="2" num_matched_ions="2" tot_num_ions="56" calc_neutral_pep_mass="1833.743703" massdiff="2.988232" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="44">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8906 <modification_info modified_peptide="YLLFCM[147]ENSAEPEQS">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8907 <mod_aminoacid_mass position="5" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8908 <mod_aminoacid_mass position="6" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8909 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8910 <search_score name="xcorr" value="0.279"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8911 <search_score name="deltacn" value="0.115"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8912 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8913 <search_score name="spscore" value="2.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8914 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8915 <search_score name="expect" value="2.06E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8916 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8917 <search_hit hit_rank="2" peptide="QEPEASNEMCFLLYS" peptide_prev_aa="K" peptide_next_aa="L" protein="XXX_gi|528969819|ref|XP_005213230.1|" num_tot_proteins="2" num_matched_ions="1" tot_num_ions="56" calc_neutral_pep_mass="1833.743703" massdiff="2.988232" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="44">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8918 <modification_info modified_peptide="QEPEASNEM[147]CFLLYS">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8919 <mod_aminoacid_mass position="9" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8920 <mod_aminoacid_mass position="10" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8921 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8922 <search_score name="xcorr" value="0.247"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8923 <search_score name="deltacn" value="0.203"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8924 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8925 <search_score name="spscore" value="0.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8926 <search_score name="sprank" value="4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8927 <search_score name="expect" value="3.18E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8928 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8929 <search_hit hit_rank="3" peptide="SMENEDKEETVAKMY" peptide_prev_aa="K" peptide_next_aa="I" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="56" calc_neutral_pep_mass="1834.760066" massdiff="1.971869" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="44">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8930 <modification_info modified_peptide="SM[147]ENEDKEETVAKM[147]Y">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8931 <mod_aminoacid_mass position="2" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8932 <mod_aminoacid_mass position="14" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8933 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8934 <search_score name="xcorr" value="0.197"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8935 <search_score name="deltacn" value="0.005"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8936 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8937 <search_score name="spscore" value="0.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8938 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8939 <search_score name="expect" value="6.26E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8940 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8941 <search_hit hit_rank="4" peptide="QEPEASNEMCFLLYS" peptide_prev_aa="K" peptide_next_aa="L" protein="XXX_gi|528969819|ref|XP_005213230.1|" num_tot_proteins="2" num_matched_ions="1" tot_num_ions="56" calc_neutral_pep_mass="1834.727719" massdiff="2.004216" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="44">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8942 <modification_info modified_peptide="QEPEASN[115]EM[147]CFLLYS">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8943 <mod_aminoacid_mass position="7" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8944 <mod_aminoacid_mass position="9" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8945 <mod_aminoacid_mass position="10" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8946 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8947 <search_score name="xcorr" value="0.196"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8948 <search_score name="deltacn" value="0.119"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8949 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8950 <search_score name="spscore" value="0.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8951 <search_score name="sprank" value="4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8952 <search_score name="expect" value="6.34E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8953 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8954 <search_hit hit_rank="5" peptide="ESEGKGCSMEAPQSHAK" peptide_prev_aa="I" peptide_next_aa="L" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="64" calc_neutral_pep_mass="1833.750929" massdiff="2.981006" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="44">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8955 <modification_info modified_peptide="ESEGKGCSMEAPQ[129]SHAK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8956 <mod_aminoacid_mass position="7" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8957 <mod_aminoacid_mass position="13" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8958 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8959 <search_score name="xcorr" value="0.172"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8960 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8961 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8962 <search_score name="spscore" value="0.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8963 <search_score name="sprank" value="6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8964 <search_score name="expect" value="8.67E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8965 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8966 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8967 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8968 <spectrum_query spectrum="201208-378803.00095.00095.2" spectrumNativeID="sample=1 period=1 cycle=1230 experiment=3" start_scan="95" end_scan="95" precursor_neutral_mass="1224.487957" assumed_charge="2" index="190" retention_time_sec="836.6">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8969 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8970 <search_hit hit_rank="1" peptide="DADQANCTEAK" peptide_prev_aa="E" peptide_next_aa="R" protein="gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="20" calc_neutral_pep_mass="1223.461212" massdiff="1.026744" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="174">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8971 <modification_info modified_peptide="DADQ[129]ANCTEAK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8972 <mod_aminoacid_mass position="4" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8973 <mod_aminoacid_mass position="7" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8974 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8975 <search_score name="xcorr" value="0.389"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8976 <search_score name="deltacn" value="0.016"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8977 <search_score name="deltacnstar" value="0.001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8978 <search_score name="spscore" value="8.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8979 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8980 <search_score name="expect" value="3.35E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8981 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8982 <search_hit hit_rank="2" peptide="DADQANCTEAK" peptide_prev_aa="E" peptide_next_aa="R" protein="gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="20" calc_neutral_pep_mass="1223.461212" massdiff="1.026744" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="174">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8983 <modification_info modified_peptide="DADQAN[115]CTEAK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8984 <mod_aminoacid_mass position="6" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8985 <mod_aminoacid_mass position="7" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8986 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8987 <search_score name="xcorr" value="0.389"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8988 <search_score name="deltacn" value="0.016"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8989 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8990 <search_score name="spscore" value="8.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8991 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8992 <search_score name="expect" value="3.36E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8993 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8994 <search_hit hit_rank="3" peptide="AETCNAQDADK" peptide_prev_aa="E" peptide_next_aa="R" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="20" calc_neutral_pep_mass="1223.461212" massdiff="1.026744" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="174">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8995 <modification_info modified_peptide="AETCNAQ[129]DADK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8996 <mod_aminoacid_mass position="4" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8997 <mod_aminoacid_mass position="7" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8998 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
8999 <search_score name="xcorr" value="0.383"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9000 <search_score name="deltacn" value="0.228"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9001 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9002 <search_score name="spscore" value="7.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9003 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9004 <search_score name="expect" value="3.66E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9005 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9006 <search_hit hit_rank="4" peptide="TEDSSSQMTPK" peptide_prev_aa="E" peptide_next_aa="G" protein="gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="20" calc_neutral_pep_mass="1225.513232" massdiff="-1.025275" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="174">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9007 <modification_info modified_peptide="TEDSSSQM[147]TPK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9008 <mod_aminoacid_mass position="8" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9009 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9010 <search_score name="xcorr" value="0.296"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9011 <search_score name="deltacn" value="0.039"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9012 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9013 <search_score name="spscore" value="4.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9014 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9015 <search_score name="expect" value="1.21E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9016 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9017 <search_hit hit_rank="5" peptide="AETCNAQDADK" peptide_prev_aa="E" peptide_next_aa="R" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="20" calc_neutral_pep_mass="1223.461212" massdiff="1.026744" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="174">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9018 <modification_info modified_peptide="AETCN[115]AQDADK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9019 <mod_aminoacid_mass position="4" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9020 <mod_aminoacid_mass position="5" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9021 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9022 <search_score name="xcorr" value="0.284"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9023 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9024 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9025 <search_score name="spscore" value="2.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9026 <search_score name="sprank" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9027 <search_score name="expect" value="1.42E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9028 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9029 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9030 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9031 <spectrum_query spectrum="201208-378803.00096.00096.2" spectrumNativeID="sample=1 period=1 cycle=1231 experiment=2" start_scan="96" end_scan="96" precursor_neutral_mass="978.483054" assumed_charge="2" index="191" retention_time_sec="839.3">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9032 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9033 <search_hit hit_rank="1" peptide="FALADLQSD" peptide_prev_aa="K" peptide_next_aa="I" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="16" calc_neutral_pep_mass="978.465826" massdiff="0.017227" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="788">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9034 <search_score name="xcorr" value="0.500"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9035 <search_score name="deltacn" value="0.230"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9036 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9037 <search_score name="spscore" value="24.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9038 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9039 <search_score name="expect" value="1.16E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9040 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9041 <search_hit hit_rank="2" peptide="AQCLLDQK" peptide_prev_aa="L" peptide_next_aa="V" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="14" calc_neutral_pep_mass="975.469532" massdiff="3.013522" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="788">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9042 <modification_info modified_peptide="AQCLLDQK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9043 <mod_aminoacid_mass position="3" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9044 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9045 <search_score name="xcorr" value="0.385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9046 <search_score name="deltacn" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9047 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9048 <search_score name="spscore" value="1.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9049 <search_score name="sprank" value="19"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9050 <search_score name="expect" value="5.86E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9051 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9052 <search_hit hit_rank="3" peptide="TNKDLTQR" peptide_prev_aa="S" peptide_next_aa="S" protein="XXX_gi|297486082|ref|XP_002695413.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="14" calc_neutral_pep_mass="976.482540" massdiff="2.000514" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="788">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9053 <modification_info modified_peptide="TN[115]KDLTQ[129]R">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9054 <mod_aminoacid_mass position="2" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9055 <mod_aminoacid_mass position="7" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9056 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9057 <search_score name="xcorr" value="0.385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9058 <search_score name="deltacn" value="0.100"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9059 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9060 <search_score name="spscore" value="12.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9061 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9062 <search_score name="expect" value="5.87E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9063 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9064 <search_hit hit_rank="4" peptide="MQLPDVQK" peptide_prev_aa="E" peptide_next_aa="L" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="14" calc_neutral_pep_mass="975.458284" massdiff="3.024769" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="788">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9065 <modification_info modified_peptide="M[147]Q[129]LPDVQ[129]K">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9066 <mod_aminoacid_mass position="1" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9067 <mod_aminoacid_mass position="2" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9068 <mod_aminoacid_mass position="7" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9069 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9070 <search_score name="xcorr" value="0.347"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9071 <search_score name="deltacn" value="0.015"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9072 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9073 <search_score name="spscore" value="11.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9074 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9075 <search_score name="expect" value="1.01E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9076 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9077 <search_hit hit_rank="5" peptide="EKADPSSRS" peptide_prev_aa="K" peptide_next_aa="L" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="16" calc_neutral_pep_mass="975.462138" massdiff="3.020916" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="788">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9078 <search_score name="xcorr" value="0.341"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9079 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9080 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9081 <search_score name="spscore" value="6.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9082 <search_score name="sprank" value="7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9083 <search_score name="expect" value="1.09E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9084 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9085 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9086 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9087 <spectrum_query spectrum="201208-378803.00096.00096.3" spectrumNativeID="sample=1 period=1 cycle=1231 experiment=2" start_scan="96" end_scan="96" precursor_neutral_mass="1467.724581" assumed_charge="3" index="192" retention_time_sec="839.3">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9088 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9089 <search_hit hit_rank="1" peptide="TIFDTEIESTSPK" peptide_prev_aa="Y" peptide_next_aa="S" protein="gi|528968108|ref|XP_005212569.1|" num_tot_proteins="4" num_matched_ions="4" tot_num_ions="48" calc_neutral_pep_mass="1466.714055" massdiff="1.010525" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="1084">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9090 <search_score name="xcorr" value="0.849"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9091 <search_score name="deltacn" value="0.027"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9092 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9093 <search_score name="spscore" value="15.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9094 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9095 <search_score name="expect" value="6.31E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9096 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9097 <search_hit hit_rank="2" peptide="NVHLQHWLAMVT" peptide_prev_aa="K" peptide_next_aa="K" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="44" calc_neutral_pep_mass="1465.702371" massdiff="2.022209" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="1084">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9098 <modification_info modified_peptide="N[115]VHLQ[129]HWLAM[147]VT">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9099 <mod_aminoacid_mass position="1" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9100 <mod_aminoacid_mass position="5" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9101 <mod_aminoacid_mass position="10" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9102 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9103 <search_score name="xcorr" value="0.826"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9104 <search_score name="deltacn" value="0.075"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9105 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9106 <search_score name="spscore" value="12.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9107 <search_score name="sprank" value="4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9108 <search_score name="expect" value="7.27E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9109 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9110 <search_hit hit_rank="3" peptide="VLKYQENADSVLS" peptide_prev_aa="K" peptide_next_aa="D" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="48" calc_neutral_pep_mass="1465.730040" massdiff="1.994540" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1084">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9111 <modification_info modified_peptide="VLKYQEN[115]ADSVLS">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9112 <mod_aminoacid_mass position="7" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9113 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9114 <search_score name="xcorr" value="0.764"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9115 <search_score name="deltacn" value="0.134"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9116 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9117 <search_score name="spscore" value="8.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9118 <search_score name="sprank" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9119 <search_score name="expect" value="1.07E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9120 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9121 <search_hit hit_rank="4" peptide="VMDRTAELSSKQT" peptide_prev_aa="R" peptide_next_aa="Q" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="5" tot_num_ions="48" calc_neutral_pep_mass="1465.708259" massdiff="2.016322" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="1084">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9122 <modification_info modified_peptide="VMDRTAELSSKQ[129]T">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9123 <mod_aminoacid_mass position="12" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9124 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9125 <search_score name="xcorr" value="0.661"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9126 <search_score name="deltacn" value="0.029"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9127 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9128 <search_score name="spscore" value="14.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9129 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9130 <search_score name="expect" value="2.03E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9131 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9132 <search_hit hit_rank="5" peptide="ETALNLAEELKSF" peptide_prev_aa="K" peptide_next_aa="Q" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="48" calc_neutral_pep_mass="1464.734791" massdiff="2.989789" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1084">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9133 <modification_info modified_peptide="ETALN[115]LAEELKSF">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9134 <mod_aminoacid_mass position="5" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9135 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9136 <search_score name="xcorr" value="0.641"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9137 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9138 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9139 <search_score name="spscore" value="2.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9140 <search_score name="sprank" value="19"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9141 <search_score name="expect" value="2.29E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9142 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9143 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9144 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9145 <spectrum_query spectrum="201208-378803.00097.00097.3" spectrumNativeID="sample=1 period=1 cycle=1234 experiment=2" start_scan="97" end_scan="97" precursor_neutral_mass="1545.710932" assumed_charge="3" index="193" retention_time_sec="843.0">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9146 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9147 <search_hit hit_rank="1" peptide="QYPGQTSPPQGQVR" peptide_prev_aa="G" peptide_next_aa="A" protein="XXX_gi|528961840|ref|XP_005211303.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="52" calc_neutral_pep_mass="1543.726686" massdiff="1.984246" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="624">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9148 <modification_info modified_peptide="Q[129]YPGQTSPPQ[129]GQVR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9149 <mod_aminoacid_mass position="1" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9150 <mod_aminoacid_mass position="10" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9151 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9152 <search_score name="xcorr" value="0.669"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9153 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9154 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9155 <search_score name="spscore" value="4.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9156 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9157 <search_score name="expect" value="7.11E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9158 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9159 <search_hit hit_rank="2" peptide="QYPGQTSPPQGQVR" peptide_prev_aa="G" peptide_next_aa="A" protein="XXX_gi|528961840|ref|XP_005211303.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="52" calc_neutral_pep_mass="1543.726686" massdiff="1.984246" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="624">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9160 <modification_info modified_peptide="Q[129]YPGQTSPPQGQ[129]VR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9161 <mod_aminoacid_mass position="1" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9162 <mod_aminoacid_mass position="12" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9163 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9164 <search_score name="xcorr" value="0.597"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9165 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9166 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9167 <search_score name="spscore" value="2.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9168 <search_score name="sprank" value="16"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9169 <search_score name="expect" value="1.26E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9170 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9171 <search_hit hit_rank="3" peptide="QYPGQTSPPQGQVR" peptide_prev_aa="G" peptide_next_aa="A" protein="XXX_gi|528961840|ref|XP_005211303.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="52" calc_neutral_pep_mass="1544.710702" massdiff="1.000230" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="624">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9172 <modification_info modified_peptide="Q[129]YPGQ[129]TSPPQ[129]GQVR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9173 <mod_aminoacid_mass position="1" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9174 <mod_aminoacid_mass position="5" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9175 <mod_aminoacid_mass position="10" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9176 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9177 <search_score name="xcorr" value="0.595"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9178 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9179 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9180 <search_score name="spscore" value="4.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9181 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9182 <search_score name="expect" value="1.28E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9183 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9184 <search_hit hit_rank="4" peptide="QYPGQTSPPQGQVR" peptide_prev_aa="G" peptide_next_aa="A" protein="XXX_gi|528961840|ref|XP_005211303.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="52" calc_neutral_pep_mass="1543.726686" massdiff="1.984246" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="624">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9185 <modification_info modified_peptide="Q[129]YPGQ[129]TSPPQGQVR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9186 <mod_aminoacid_mass position="1" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9187 <mod_aminoacid_mass position="5" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9188 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9189 <search_score name="xcorr" value="0.582"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9190 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9191 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9192 <search_score name="spscore" value="2.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9193 <search_score name="sprank" value="13"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9194 <search_score name="expect" value="1.42E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9195 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9196 <search_hit hit_rank="5" peptide="QYPGQTSPPQGQVR" peptide_prev_aa="G" peptide_next_aa="A" protein="XXX_gi|528961840|ref|XP_005211303.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="52" calc_neutral_pep_mass="1544.710702" massdiff="1.000230" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="624">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9197 <modification_info modified_peptide="Q[129]YPGQTSPPQ[129]GQ[129]VR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9198 <mod_aminoacid_mass position="1" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9199 <mod_aminoacid_mass position="10" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9200 <mod_aminoacid_mass position="12" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9201 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9202 <search_score name="xcorr" value="0.561"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9203 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9204 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9205 <search_score name="spscore" value="0.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9206 <search_score name="sprank" value="25"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9207 <search_score name="expect" value="1.68E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9208 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9209 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9210 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9211 <spectrum_query spectrum="201208-378803.00097.00097.2" spectrumNativeID="sample=1 period=1 cycle=1234 experiment=2" start_scan="97" end_scan="97" precursor_neutral_mass="1030.473955" assumed_charge="2" index="194" retention_time_sec="843.0">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9212 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9213 <search_hit hit_rank="1" peptide="DAEPTTPGNK" peptide_prev_aa="A" peptide_next_aa="I" protein="XXX_gi|32880221|ref|NP_872593.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="18" calc_neutral_pep_mass="1028.477454" massdiff="1.996501" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="312">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9214 <search_score name="xcorr" value="0.508"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9215 <search_score name="deltacn" value="0.260"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9216 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9217 <search_score name="spscore" value="7.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9218 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9219 <search_score name="expect" value="2.75E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9220 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9221 <search_hit hit_rank="2" peptide="NCLSVASYI" peptide_prev_aa="K" peptide_next_aa="S" protein="XXX_gi|358418103|ref|XP_600387.4|" num_tot_proteins="4" num_matched_ions="1" tot_num_ions="16" calc_neutral_pep_mass="1027.453214" massdiff="3.020741" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="312">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9222 <modification_info modified_peptide="N[115]CLSVASYI">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9223 <mod_aminoacid_mass position="1" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9224 <mod_aminoacid_mass position="2" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9225 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9226 <search_score name="xcorr" value="0.376"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9227 <search_score name="deltacn" value="0.017"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9228 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9229 <search_score name="spscore" value="2.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9230 <search_score name="sprank" value="13"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9231 <search_score name="expect" value="1.26E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9232 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9233 <search_hit hit_rank="3" peptide="FQAFMNNR" peptide_prev_aa="K" peptide_next_aa="K" protein="XXX_gi|528968106|ref|XP_005212568.1|" num_tot_proteins="2" num_matched_ions="0" tot_num_ions="14" calc_neutral_pep_mass="1027.454551" massdiff="3.019404" num_tol_term="2" num_missed_cleavages="0" num_matched_peptides="312">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9234 <modification_info modified_peptide="FQAFMN[115]NR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9235 <mod_aminoacid_mass position="6" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9236 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9237 <search_score name="xcorr" value="0.370"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9238 <search_score name="deltacn" value="0.044"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9239 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9240 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9241 <search_score name="sprank" value="18"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9242 <search_score name="expect" value="1.36E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9243 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9244 <search_hit hit_rank="4" peptide="EQISEQLNA" peptide_prev_aa="K" peptide_next_aa="L" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="0" tot_num_ions="16" calc_neutral_pep_mass="1031.477120" massdiff="-1.003165" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="312">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9245 <modification_info modified_peptide="EQISEQLN[115]A">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9246 <mod_aminoacid_mass position="8" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9247 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9248 <search_score name="xcorr" value="0.353"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9249 <search_score name="deltacn" value="0.075"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9250 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9251 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9252 <search_score name="sprank" value="18"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9253 <search_score name="expect" value="1.64E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9254 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9255 <search_hit hit_rank="5" peptide="QANLMNPDK" peptide_prev_aa="I" peptide_next_aa="Q" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="16" calc_neutral_pep_mass="1031.459362" massdiff="-0.985407" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="312">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9256 <modification_info modified_peptide="Q[129]AN[115]LMNPDK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9257 <mod_aminoacid_mass position="1" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9258 <mod_aminoacid_mass position="3" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9259 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9260 <search_score name="xcorr" value="0.327"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9261 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9262 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9263 <search_score name="spscore" value="2.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9264 <search_score name="sprank" value="13"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9265 <search_score name="expect" value="2.22E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9266 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9267 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9268 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9269 <spectrum_query spectrum="201208-378803.00098.00098.2" spectrumNativeID="sample=1 period=1 cycle=1235 experiment=2" start_scan="98" end_scan="98" precursor_neutral_mass="1333.706992" assumed_charge="2" index="195" retention_time_sec="845.6">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9270 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9271 <search_hit hit_rank="1" peptide="LRSALSPESGYR" peptide_prev_aa="V" peptide_next_aa="N" protein="XXX_gi|528993971|ref|XP_005219929.1|" num_tot_proteins="4" num_matched_ions="1" tot_num_ions="22" calc_neutral_pep_mass="1334.694263" massdiff="-0.987271" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="678">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9272 <search_score name="xcorr" value="0.340"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9273 <search_score name="deltacn" value="0.004"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9274 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9275 <search_score name="spscore" value="1.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9276 <search_score name="sprank" value="6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9277 <search_score name="expect" value="1.56E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9278 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9279 <search_hit hit_rank="2" peptide="AVEKEGTKQGGAR" peptide_prev_aa="H" peptide_next_aa="E" protein="gi|528961840|ref|XP_005211303.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="24" calc_neutral_pep_mass="1330.684093" massdiff="3.022899" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="678">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9280 <modification_info modified_peptide="AVEKEGTKQ[129]GGAR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9281 <mod_aminoacid_mass position="9" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9282 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9283 <search_score name="xcorr" value="0.339"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9284 <search_score name="deltacn" value="0.122"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9285 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9286 <search_score name="spscore" value="0.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9287 <search_score name="sprank" value="12"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9288 <search_score name="expect" value="1.59E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9289 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9290 <search_hit hit_rank="3" peptide="AKGIEEDLVSFK" peptide_prev_aa="V" peptide_next_aa="I" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="22" calc_neutral_pep_mass="1334.708182" massdiff="-1.001190" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="678">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9291 <search_score name="xcorr" value="0.298"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9292 <search_score name="deltacn" value="0.027"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9293 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9294 <search_score name="spscore" value="0.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9295 <search_score name="sprank" value="11"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9296 <search_score name="expect" value="2.66E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9297 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9298 <search_hit hit_rank="4" peptide="QQQEKESSLKK" peptide_prev_aa="L" peptide_next_aa="L" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="20" calc_neutral_pep_mass="1331.704494" massdiff="2.002498" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="678">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9299 <search_score name="xcorr" value="0.290"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9300 <search_score name="deltacn" value="0.014"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9301 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9302 <search_score name="spscore" value="1.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9303 <search_score name="sprank" value="8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9304 <search_score name="expect" value="2.93E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9305 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9306 <search_hit hit_rank="5" peptide="AVFLPATTEIWS" peptide_prev_aa="K" peptide_next_aa="W" protein="gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="0" tot_num_ions="22" calc_neutral_pep_mass="1333.691804" massdiff="0.015188" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="678">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9307 <search_score name="xcorr" value="0.285"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9308 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9309 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9310 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9311 <search_score name="sprank" value="14"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9312 <search_score name="expect" value="3.09E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9313 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9314 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9315 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9316 <spectrum_query spectrum="201208-378803.00098.00098.3" spectrumNativeID="sample=1 period=1 cycle=1235 experiment=2" start_scan="98" end_scan="98" precursor_neutral_mass="2000.560488" assumed_charge="3" index="196" retention_time_sec="845.6">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9317 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9318 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9319 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9320 <spectrum_query spectrum="201208-378803.00099.00099.3" spectrumNativeID="sample=1 period=1 cycle=1236 experiment=2" start_scan="99" end_scan="99" precursor_neutral_mass="1443.659627" assumed_charge="3" index="197" retention_time_sec="848.3">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9321 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9322 <search_hit hit_rank="1" peptide="SDAITQEFMDLR" peptide_prev_aa="S" peptide_next_aa="T" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="4" tot_num_ions="44" calc_neutral_pep_mass="1440.655480" massdiff="3.004147" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="620">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9323 <modification_info modified_peptide="SDAITQEFM[147]DLR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9324 <mod_aminoacid_mass position="9" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9325 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9326 <search_score name="xcorr" value="0.721"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9327 <search_score name="deltacn" value="0.168"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9328 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9329 <search_score name="spscore" value="13.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9330 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9331 <search_score name="expect" value="3.04E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9332 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9333 <search_hit hit_rank="2" peptide="EDFAKPVYTEDK" peptide_prev_aa="P" peptide_next_aa="L" protein="XXX_gi|30794280|ref|NP_851335.1|" num_tot_proteins="1" num_matched_ions="3" tot_num_ions="44" calc_neutral_pep_mass="1440.677276" massdiff="2.982351" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="620">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9334 <search_score name="xcorr" value="0.600"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9335 <search_score name="deltacn" value="0.053"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9336 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9337 <search_score name="spscore" value="9.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9338 <search_score name="sprank" value="4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9339 <search_score name="expect" value="8.67E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9340 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9341 <search_hit hit_rank="3" peptide="NKPGVYTKVCNY" peptide_prev_aa="K" peptide_next_aa="V" protein="gi|528903801|ref|XP_871686.4|" num_tot_proteins="3" num_matched_ions="5" tot_num_ions="44" calc_neutral_pep_mass="1443.670417" massdiff="-0.010791" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="620">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9342 <modification_info modified_peptide="N[115]KPGVYTKVCNY">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9343 <mod_aminoacid_mass position="1" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9344 <mod_aminoacid_mass position="10" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9345 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9346 <search_score name="xcorr" value="0.568"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9347 <search_score name="deltacn" value="0.033"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9348 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9349 <search_score name="spscore" value="18.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9350 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9351 <search_score name="expect" value="1.14E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9352 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9353 <search_hit hit_rank="4" peptide="NRKQEESAEAGAPG" peptide_prev_aa="K" peptide_next_aa="G" protein="gi|528921178|ref|XP_592304.7|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="52" calc_neutral_pep_mass="1442.674984" massdiff="0.984642" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="620">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9354 <search_score name="xcorr" value="0.549"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9355 <search_score name="deltacn" value="0.056"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9356 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9357 <search_score name="spscore" value="5.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9358 <search_score name="sprank" value="11"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9359 <search_score name="expect" value="1.34E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9360 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9361 <search_hit hit_rank="5" peptide="ELSDALQMHPMR" peptide_prev_aa="V" peptide_next_aa="G" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="3" tot_num_ions="44" calc_neutral_pep_mass="1442.664605" massdiff="0.995022" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="620">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9362 <modification_info modified_peptide="ELSDALQM[147]HPMR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9363 <mod_aminoacid_mass position="8" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9364 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9365 <search_score name="xcorr" value="0.518"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9366 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9367 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9368 <search_score name="spscore" value="8.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9369 <search_score name="sprank" value="6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9370 <search_score name="expect" value="1.76E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9371 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9372 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9373 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9374 <spectrum_query spectrum="201208-378803.00099.00099.2" spectrumNativeID="sample=1 period=1 cycle=1236 experiment=2" start_scan="99" end_scan="99" precursor_neutral_mass="962.439751" assumed_charge="2" index="198" retention_time_sec="848.3">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9375 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9376 <search_hit hit_rank="1" peptide="YNNSVDPR" peptide_prev_aa="G" peptide_next_aa="I" protein="gi|528993971|ref|XP_005219929.1|" num_tot_proteins="4" num_matched_ions="2" tot_num_ions="14" calc_neutral_pep_mass="963.441009" massdiff="-1.001257" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="642">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9377 <search_score name="xcorr" value="0.600"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9378 <search_score name="deltacn" value="0.241"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9379 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9380 <search_score name="spscore" value="16.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9381 <search_score name="sprank" value="6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9382 <search_score name="expect" value="4.23E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9383 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9384 <search_hit hit_rank="2" peptide="EQVDPLQM" peptide_prev_aa="K" peptide_next_aa="K" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="14" calc_neutral_pep_mass="959.426998" massdiff="3.012753" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="642">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9385 <modification_info modified_peptide="EQ[129]VDPLQM">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9386 <mod_aminoacid_mass position="2" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9387 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9388 <search_score name="xcorr" value="0.456"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9389 <search_score name="deltacn" value="0.025"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9390 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9391 <search_score name="spscore" value="2.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9392 <search_score name="sprank" value="20"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9393 <search_score name="expect" value="1.74E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9394 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9395 <search_hit hit_rank="3" peptide="SSAAGGQGSSR" peptide_prev_aa="E" peptide_next_aa="R" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="20" calc_neutral_pep_mass="963.436986" massdiff="-0.997235" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="642">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9396 <search_score name="xcorr" value="0.444"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9397 <search_score name="deltacn" value="0.009"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9398 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9399 <search_score name="spscore" value="7.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9400 <search_score name="sprank" value="14"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9401 <search_score name="expect" value="1.94E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9402 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9403 <search_hit hit_rank="4" peptide="SQENLENK" peptide_prev_aa="I" peptide_next_aa="E" protein="gi|528928354|ref|XP_005193233.1|" num_tot_proteins="1" num_matched_ions="3" tot_num_ions="14" calc_neutral_pep_mass="961.435255" massdiff="1.004496" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="642">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9404 <modification_info modified_peptide="SQENLEN[115]K">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9405 <mod_aminoacid_mass position="7" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9406 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9407 <search_score name="xcorr" value="0.440"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9408 <search_score name="deltacn" value="0.031"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9409 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9410 <search_score name="spscore" value="28.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9411 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9412 <search_score name="expect" value="2.02E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9413 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9414 <search_hit hit_rank="5" peptide="PPSAEGNHR" peptide_prev_aa="L" peptide_next_aa="V" protein="XXX_gi|528961840|ref|XP_005211303.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="16" calc_neutral_pep_mass="963.452242" massdiff="-1.012491" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="642">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9415 <search_score name="xcorr" value="0.426"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9416 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9417 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9418 <search_score name="spscore" value="6.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9419 <search_score name="sprank" value="15"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9420 <search_score name="expect" value="2.31E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9421 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9422 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9423 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9424 <spectrum_query spectrum="201208-378803.00100.00100.2" spectrumNativeID="sample=1 period=1 cycle=1236 experiment=3" start_scan="100" end_scan="100" precursor_neutral_mass="1345.557801" assumed_charge="2" index="199" retention_time_sec="850.4">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9425 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9426 <search_hit hit_rank="1" peptide="KMSEKETSSGED" peptide_prev_aa="R" peptide_next_aa="Q" protein="gi|358418103|ref|XP_600387.4|" num_tot_proteins="4" num_matched_ions="2" tot_num_ions="22" calc_neutral_pep_mass="1342.555825" massdiff="3.001976" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="240">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9427 <modification_info modified_peptide="KM[147]SEKETSSGED">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9428 <mod_aminoacid_mass position="2" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9429 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9430 <search_score name="xcorr" value="0.389"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9431 <search_score name="deltacn" value="0.124"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9432 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9433 <search_score name="spscore" value="10.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9434 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9435 <search_score name="expect" value="4.91E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9436 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9437 <search_hit hit_rank="2" peptide="EQTIADSSSLMF" peptide_prev_aa="R" peptide_next_aa="M" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="0" tot_num_ions="22" calc_neutral_pep_mass="1344.575499" massdiff="0.982303" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="240">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9438 <modification_info modified_peptide="EQ[129]TIADSSSLM[147]F">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9439 <mod_aminoacid_mass position="2" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9440 <mod_aminoacid_mass position="11" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9441 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9442 <search_score name="xcorr" value="0.341"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9443 <search_score name="deltacn" value="0.034"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9444 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9445 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9446 <search_score name="sprank" value="12"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9447 <search_score name="expect" value="9.29E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9448 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9449 <search_hit hit_rank="3" peptide="LDQMVFFWED" peptide_prev_aa="K" peptide_next_aa="I" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="18" calc_neutral_pep_mass="1345.553641" massdiff="0.004160" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="240">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9450 <modification_info modified_peptide="LDQ[129]M[147]VFFWED">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9451 <mod_aminoacid_mass position="3" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9452 <mod_aminoacid_mass position="4" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9453 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9454 <search_score name="xcorr" value="0.329"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9455 <search_score name="deltacn" value="0.003"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9456 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9457 <search_score name="spscore" value="5.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9458 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9459 <search_score name="expect" value="1.08E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9460 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9461 <search_hit hit_rank="4" peptide="GAEGGGSAEGGGSQPQ" peptide_prev_aa="R" peptide_next_aa="A" protein="XXX_gi|528961840|ref|XP_005211303.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="30" calc_neutral_pep_mass="1344.554201" massdiff="1.003601" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="240">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9462 <search_score name="xcorr" value="0.328"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9463 <search_score name="deltacn" value="0.134"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9464 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9465 <search_score name="spscore" value="7.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9466 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9467 <search_score name="expect" value="1.09E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9468 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9469 <search_hit hit_rank="5" peptide="LDQMVFFWED" peptide_prev_aa="K" peptide_next_aa="I" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="18" calc_neutral_pep_mass="1344.569625" massdiff="0.988176" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="240">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9470 <modification_info modified_peptide="LDQM[147]VFFWED">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9471 <mod_aminoacid_mass position="4" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9472 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9473 <search_score name="xcorr" value="0.284"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9474 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9475 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9476 <search_score name="spscore" value="5.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9477 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9478 <search_score name="expect" value="1.95E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9479 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9480 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9481 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9482 <spectrum_query spectrum="201208-378803.00100.00100.3" spectrumNativeID="sample=1 period=1 cycle=1236 experiment=3" start_scan="100" end_scan="100" precursor_neutral_mass="2018.336702" assumed_charge="3" index="200" retention_time_sec="850.4">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9483 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9484 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9485 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9486 <spectrum_query spectrum="201208-378803.00101.00101.2" spectrumNativeID="sample=1 period=1 cycle=1238 experiment=2" start_scan="101" end_scan="101" precursor_neutral_mass="909.293614" assumed_charge="2" index="201" retention_time_sec="853.6">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9487 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9488 <search_hit hit_rank="1" peptide="NQDDCEK" peptide_prev_aa="L" peptide_next_aa="R" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="0" tot_num_ions="12" calc_neutral_pep_mass="909.302193" massdiff="-0.008578" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="14">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9489 <modification_info modified_peptide="NQ[129]DDCEK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9490 <mod_aminoacid_mass position="2" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9491 <mod_aminoacid_mass position="5" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9492 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9493 <search_score name="xcorr" value="0.086"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9494 <search_score name="deltacn" value="0.690"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9495 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9496 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9497 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9498 <search_score name="expect" value="1.21E+002"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9499 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9500 <search_hit hit_rank="2" peptide="NQDDCEK" peptide_prev_aa="L" peptide_next_aa="R" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="0" tot_num_ions="12" calc_neutral_pep_mass="909.302193" massdiff="-0.008578" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="14">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9501 <modification_info modified_peptide="N[115]QDDCEK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9502 <mod_aminoacid_mass position="1" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9503 <mod_aminoacid_mass position="5" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9504 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9505 <search_score name="xcorr" value="0.086"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9506 <search_score name="deltacn" value="0.690"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9507 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9508 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9509 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9510 <search_score name="expect" value="1.21E+002"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9511 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9512 <search_hit hit_rank="3" peptide="MCCHER" peptide_prev_aa="V" peptide_next_aa="C" protein="XXX_gi|358418103|ref|XP_600387.4|" num_tot_proteins="4" num_matched_ions="0" tot_num_ions="10" calc_neutral_pep_mass="909.277894" massdiff="0.015720" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="14">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9513 <modification_info modified_peptide="M[147]CCHER">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9514 <mod_aminoacid_mass position="1" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9515 <mod_aminoacid_mass position="2" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9516 <mod_aminoacid_mass position="3" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9517 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9518 <search_score name="xcorr" value="0.027"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9519 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9520 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9521 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9522 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9523 <search_score name="expect" value="3.82E+002"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9524 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9525 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9526 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9527 <spectrum_query spectrum="201208-378803.00101.00101.3" spectrumNativeID="sample=1 period=1 cycle=1238 experiment=2" start_scan="101" end_scan="101" precursor_neutral_mass="1363.940421" assumed_charge="3" index="202" retention_time_sec="853.6">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9528 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9529 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9530 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9531 <spectrum_query spectrum="201208-378803.00102.00102.3" spectrumNativeID="sample=1 period=1 cycle=1239 experiment=2" start_scan="102" end_scan="102" precursor_neutral_mass="1455.590540" assumed_charge="3" index="203" retention_time_sec="856.2">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9532 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9533 <search_hit hit_rank="1" peptide="GKCCLTYCFNK" peptide_prev_aa="C" peptide_next_aa="P" protein="gi|528968221|ref|XP_005212615.1|" num_tot_proteins="2" num_matched_ions="2" tot_num_ions="40" calc_neutral_pep_mass="1453.556377" massdiff="2.034163" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="378">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9534 <modification_info modified_peptide="GKCCLTYCFN[115]K">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9535 <mod_aminoacid_mass position="3" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9536 <mod_aminoacid_mass position="4" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9537 <mod_aminoacid_mass position="8" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9538 <mod_aminoacid_mass position="10" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9539 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9540 <search_score name="xcorr" value="0.445"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9541 <search_score name="deltacn" value="0.083"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9542 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9543 <search_score name="spscore" value="1.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9544 <search_score name="sprank" value="7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9545 <search_score name="expect" value="9.63E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9546 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9547 <search_hit hit_rank="2" peptide="IQNSCRSVFQGGT" peptide_prev_aa="K" peptide_next_aa="E" protein="gi|529012038|ref|XP_005226889.1|" num_tot_proteins="2" num_matched_ions="2" tot_num_ions="48" calc_neutral_pep_mass="1456.614026" massdiff="-1.023486" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="378">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9548 <modification_info modified_peptide="IQ[129]N[115]SCRSVFQ[129]GGT">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9549 <mod_aminoacid_mass position="2" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9550 <mod_aminoacid_mass position="3" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9551 <mod_aminoacid_mass position="5" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9552 <mod_aminoacid_mass position="10" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9553 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9554 <search_score name="xcorr" value="0.408"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9555 <search_score name="deltacn" value="0.029"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9556 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9557 <search_score name="spscore" value="2.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9558 <search_score name="sprank" value="4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9559 <search_score name="expect" value="1.41E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9560 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9561 <search_hit hit_rank="3" peptide="EWANNMEDISKN" peptide_prev_aa="K" peptide_next_aa="L" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="44" calc_neutral_pep_mass="1452.571491" massdiff="3.019049" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="378">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9562 <modification_info modified_peptide="EWAN[115]N[115]MEDISKN[115]">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9563 <mod_aminoacid_mass position="4" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9564 <mod_aminoacid_mass position="5" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9565 <mod_aminoacid_mass position="12" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9566 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9567 <search_score name="xcorr" value="0.396"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9568 <search_score name="deltacn" value="0.036"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9569 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9570 <search_score name="spscore" value="3.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9571 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9572 <search_score name="expect" value="1.59E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9573 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9574 <search_hit hit_rank="4" peptide="LVRAQQCVCCR" peptide_prev_aa="V" peptide_next_aa="T" protein="XXX_gi|358418103|ref|XP_600387.4|" num_tot_proteins="4" num_matched_ions="1" tot_num_ions="40" calc_neutral_pep_mass="1453.599973" massdiff="1.990567" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="378">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9575 <modification_info modified_peptide="LVRAQ[129]Q[129]CVCCR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9576 <mod_aminoacid_mass position="5" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9577 <mod_aminoacid_mass position="6" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9578 <mod_aminoacid_mass position="7" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9579 <mod_aminoacid_mass position="9" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9580 <mod_aminoacid_mass position="10" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9581 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9582 <search_score name="xcorr" value="0.382"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9583 <search_score name="deltacn" value="0.022"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9584 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9585 <search_score name="spscore" value="0.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9586 <search_score name="sprank" value="11"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9587 <search_score name="expect" value="1.84E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9588 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9589 <search_hit hit_rank="5" peptide="QDAGLSPQHEWW" peptide_prev_aa="R" peptide_next_aa="F" protein="XXX_gi|528995523|ref|XP_002695913.2|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="44" calc_neutral_pep_mass="1454.610260" massdiff="0.980280" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="378">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9590 <modification_info modified_peptide="Q[129]DAGLSPQ[129]HEWW">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9591 <mod_aminoacid_mass position="1" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9592 <mod_aminoacid_mass position="8" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9593 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9594 <search_score name="xcorr" value="0.374"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9595 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9596 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9597 <search_score name="spscore" value="1.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9598 <search_score name="sprank" value="10"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9599 <search_score name="expect" value="2.01E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9600 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9601 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9602 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9603 <spectrum_query spectrum="201208-378803.00102.00102.2" spectrumNativeID="sample=1 period=1 cycle=1239 experiment=2" start_scan="102" end_scan="102" precursor_neutral_mass="970.393693" assumed_charge="2" index="204" retention_time_sec="856.2">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9604 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9605 <search_hit hit_rank="1" peptide="DAIWSMET" peptide_prev_aa="R" peptide_next_aa="Y" protein="XXX_gi|32880221|ref|NP_872593.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="14" calc_neutral_pep_mass="967.395683" massdiff="2.998010" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="142">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9606 <modification_info modified_peptide="DAIWSM[147]ET">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9607 <mod_aminoacid_mass position="6" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9608 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9609 <search_score name="xcorr" value="0.356"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9610 <search_score name="deltacn" value="0.132"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9611 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9612 <search_score name="spscore" value="2.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9613 <search_score name="sprank" value="4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9614 <search_score name="expect" value="2.39E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9615 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9616 <search_hit hit_rank="2" peptide="NMEDISKN" peptide_prev_aa="K" peptide_next_aa="A" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="14" calc_neutral_pep_mass="967.380428" massdiff="3.013265" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="142">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9617 <modification_info modified_peptide="N[115]M[147]EDISKN[115]">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9618 <mod_aminoacid_mass position="1" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9619 <mod_aminoacid_mass position="2" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9620 <mod_aminoacid_mass position="8" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9621 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9622 <search_score name="xcorr" value="0.309"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9623 <search_score name="deltacn" value="0.217"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9624 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9625 <search_score name="spscore" value="4.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9626 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9627 <search_score name="expect" value="5.07E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9628 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9629 <search_hit hit_rank="3" peptide="EMSWIADT" peptide_prev_aa="R" peptide_next_aa="Y" protein="gi|32880221|ref|NP_872593.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="14" calc_neutral_pep_mass="967.395683" massdiff="2.998010" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="142">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9630 <modification_info modified_peptide="EM[147]SWIADT">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9631 <mod_aminoacid_mass position="2" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9632 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9633 <search_score name="xcorr" value="0.242"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9634 <search_score name="deltacn" value="0.009"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9635 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9636 <search_score name="spscore" value="2.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9637 <search_score name="sprank" value="4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9638 <search_score name="expect" value="1.48E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9639 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9640 <search_hit hit_rank="4" peptide="NSCISIFQ" peptide_prev_aa="K" peptide_next_aa="G" protein="gi|119924469|ref|XP_001252524.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="14" calc_neutral_pep_mass="970.395365" massdiff="-0.001672" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="142">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9641 <modification_info modified_peptide="N[115]SCISIFQ[129]">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9642 <mod_aminoacid_mass position="1" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9643 <mod_aminoacid_mass position="3" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9644 <mod_aminoacid_mass position="8" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9645 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9646 <search_score name="xcorr" value="0.240"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9647 <search_score name="deltacn" value="0.033"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9648 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9649 <search_score name="spscore" value="1.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9650 <search_score name="sprank" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9651 <search_score name="expect" value="1.53E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9652 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9653 <search_hit hit_rank="5" peptide="SSTEKESMG" peptide_prev_aa="K" peptide_next_aa="E" protein="XXX_gi|358418103|ref|XP_600387.4|" num_tot_proteins="4" num_matched_ions="1" tot_num_ions="16" calc_neutral_pep_mass="970.391326" massdiff="0.002367" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="142">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9654 <modification_info modified_peptide="SSTEKESM[147]G">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9655 <mod_aminoacid_mass position="8" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9656 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9657 <search_score name="xcorr" value="0.232"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9658 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9659 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9660 <search_score name="spscore" value="3.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9661 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9662 <search_score name="expect" value="1.73E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9663 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9664 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9665 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9666 <spectrum_query spectrum="201208-378803.00103.00103.3" spectrumNativeID="sample=1 period=1 cycle=1281 experiment=2" start_scan="103" end_scan="103" precursor_neutral_mass="1772.214200" assumed_charge="3" index="205" retention_time_sec="880.3">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9667 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9668 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9669 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9670 <spectrum_query spectrum="201208-378803.00103.00103.2" spectrumNativeID="sample=1 period=1 cycle=1281 experiment=2" start_scan="103" end_scan="103" precursor_neutral_mass="1181.476133" assumed_charge="2" index="206" retention_time_sec="880.3">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9671 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9672 <search_hit hit_rank="1" peptide="EDQAMSDQLK" peptide_prev_aa="L" peptide_next_aa="E" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="18" calc_neutral_pep_mass="1181.475785" massdiff="0.000348" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="198">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9673 <modification_info modified_peptide="EDQ[129]AM[147]SDQ[129]LK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9674 <mod_aminoacid_mass position="3" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9675 <mod_aminoacid_mass position="5" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9676 <mod_aminoacid_mass position="8" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9677 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9678 <search_score name="xcorr" value="0.393"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9679 <search_score name="deltacn" value="0.059"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9680 <search_score name="deltacnstar" value="0.019"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9681 <search_score name="spscore" value="10.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9682 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9683 <search_score name="expect" value="1.12E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9684 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9685 <search_hit hit_rank="2" peptide="EDQAMSDQLK" peptide_prev_aa="L" peptide_next_aa="E" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="18" calc_neutral_pep_mass="1180.491769" massdiff="0.984364" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="198">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9686 <modification_info modified_peptide="EDQ[129]AM[147]SDQLK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9687 <mod_aminoacid_mass position="3" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9688 <mod_aminoacid_mass position="5" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9689 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9690 <search_score name="xcorr" value="0.386"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9691 <search_score name="deltacn" value="0.041"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9692 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9693 <search_score name="spscore" value="10.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9694 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9695 <search_score name="expect" value="1.27E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9696 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9697 <search_hit hit_rank="3" peptide="PCETLQNYR" peptide_prev_aa="S" peptide_next_aa="E" protein="XXX_gi|528921178|ref|XP_592304.7|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="16" calc_neutral_pep_mass="1182.486305" massdiff="-1.010172" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="198">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9698 <modification_info modified_peptide="PCETLQ[129]N[115]YR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9699 <mod_aminoacid_mass position="2" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9700 <mod_aminoacid_mass position="6" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9701 <mod_aminoacid_mass position="7" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9702 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9703 <search_score name="xcorr" value="0.370"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9704 <search_score name="deltacn" value="0.038"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9705 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9706 <search_score name="spscore" value="2.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9707 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9708 <search_score name="expect" value="1.66E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9709 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9710 <search_hit hit_rank="4" peptide="QSNDESSLSES" peptide_prev_aa="K" peptide_next_aa="V" protein="XXX_gi|358418103|ref|XP_600387.4|" num_tot_proteins="4" num_matched_ions="2" tot_num_ions="20" calc_neutral_pep_mass="1181.468405" massdiff="0.007728" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="198">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9711 <search_score name="xcorr" value="0.356"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9712 <search_score name="deltacn" value="0.373"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9713 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9714 <search_score name="spscore" value="11.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9715 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9716 <search_score name="expect" value="2.12E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9717 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9718 <search_hit hit_rank="5" peptide="LTGEEELMQD" peptide_prev_aa="R" peptide_next_aa="L" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="18" calc_neutral_pep_mass="1180.480536" massdiff="0.995597" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="198">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9719 <modification_info modified_peptide="LTGEEELM[147]Q[129]D">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9720 <mod_aminoacid_mass position="8" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9721 <mod_aminoacid_mass position="9" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9722 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9723 <search_score name="xcorr" value="0.223"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9724 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9725 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9726 <search_score name="spscore" value="0.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9727 <search_score name="sprank" value="11"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9728 <search_score name="expect" value="2.02E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9729 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9730 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9731 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9732 <spectrum_query spectrum="201208-378803.00104.00104.3" spectrumNativeID="sample=1 period=1 cycle=1283 experiment=2" start_scan="104" end_scan="104" precursor_neutral_mass="1770.954827" assumed_charge="3" index="207" retention_time_sec="883.5">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9733 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9734 <search_hit hit_rank="1" peptide="EQRLIQRIQSPASSR" peptide_prev_aa="C" peptide_next_aa="T" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="56" calc_neutral_pep_mass="1769.938411" massdiff="1.016417" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="396">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9735 <modification_info modified_peptide="EQ[129]RLIQRIQ[129]SPASSR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9736 <mod_aminoacid_mass position="2" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9737 <mod_aminoacid_mass position="9" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9738 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9739 <search_score name="xcorr" value="0.393"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9740 <search_score name="deltacn" value="0.009"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9741 <search_score name="deltacnstar" value="0.001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9742 <search_score name="spscore" value="3.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9743 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9744 <search_score name="expect" value="1.18E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9745 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9746 <search_hit hit_rank="2" peptide="EQRLIQRIQSPASSR" peptide_prev_aa="C" peptide_next_aa="T" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="56" calc_neutral_pep_mass="1768.954395" massdiff="2.000433" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="396">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9747 <modification_info modified_peptide="EQ[129]RLIQRIQSPASSR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9748 <mod_aminoacid_mass position="2" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9749 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9750 <search_score name="xcorr" value="0.393"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9751 <search_score name="deltacn" value="0.008"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9752 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9753 <search_score name="spscore" value="3.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9754 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9755 <search_score name="expect" value="1.19E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9756 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9757 <search_hit hit_rank="3" peptide="VPECLYALPGLRRLN" peptide_prev_aa="R" peptide_next_aa="L" protein="gi|528921178|ref|XP_592304.7|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="56" calc_neutral_pep_mass="1770.945076" massdiff="0.009751" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="396">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9758 <modification_info modified_peptide="VPECLYALPGLRRLN">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9759 <mod_aminoacid_mass position="4" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9760 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9761 <search_score name="xcorr" value="0.390"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9762 <search_score name="deltacn" value="0.032"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9763 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9764 <search_score name="spscore" value="1.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9765 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9766 <search_score name="expect" value="1.23E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9767 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9768 <search_hit hit_rank="4" peptide="ADQPELINLEKASKGR" peptide_prev_aa="S" peptide_next_aa="D" protein="gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="60" calc_neutral_pep_mass="1768.931928" massdiff="2.022899" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="396">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9769 <modification_info modified_peptide="ADQ[129]PELINLEKASKGR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9770 <mod_aminoacid_mass position="3" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9771 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9772 <search_score name="xcorr" value="0.377"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9773 <search_score name="deltacn" value="0.079"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9774 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9775 <search_score name="spscore" value="0.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9776 <search_score name="sprank" value="14"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9777 <search_score name="expect" value="1.43E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9778 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9779 <search_hit hit_rank="5" peptide="EQRLIQRIQSPASSR" peptide_prev_aa="C" peptide_next_aa="T" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="56" calc_neutral_pep_mass="1769.938411" massdiff="1.016417" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="396">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9780 <modification_info modified_peptide="EQ[129]RLIQ[129]RIQSPASSR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9781 <mod_aminoacid_mass position="2" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9782 <mod_aminoacid_mass position="6" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9783 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9784 <search_score name="xcorr" value="0.347"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9785 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9786 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9787 <search_score name="spscore" value="1.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9788 <search_score name="sprank" value="6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9789 <search_score name="expect" value="2.02E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9790 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9791 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9792 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9793 <spectrum_query spectrum="201208-378803.00104.00104.2" spectrumNativeID="sample=1 period=1 cycle=1283 experiment=2" start_scan="104" end_scan="104" precursor_neutral_mass="1180.636551" assumed_charge="2" index="208" retention_time_sec="883.5">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9794 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9795 <search_hit hit_rank="1" peptide="ANWRPAQPLK" peptide_prev_aa="L" peptide_next_aa="N" protein="gi|30466252|ref|NP_848667.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="18" calc_neutral_pep_mass="1180.635292" massdiff="0.001259" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="282">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9796 <modification_info modified_peptide="ANWRPAQ[129]PLK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9797 <mod_aminoacid_mass position="7" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9798 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9799 <search_score name="xcorr" value="0.386"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9800 <search_score name="deltacn" value="0.409"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9801 <search_score name="deltacnstar" value="0.069"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9802 <search_score name="spscore" value="3.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9803 <search_score name="sprank" value="4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9804 <search_score name="expect" value="1.49E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9805 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9806 <search_hit hit_rank="2" peptide="ANWRPAQPLK" peptide_prev_aa="L" peptide_next_aa="N" protein="gi|30466252|ref|NP_848667.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="18" calc_neutral_pep_mass="1180.635292" massdiff="0.001259" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="282">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9807 <modification_info modified_peptide="AN[115]WRPAQPLK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9808 <mod_aminoacid_mass position="2" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9809 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9810 <search_score name="xcorr" value="0.360"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9811 <search_score name="deltacn" value="0.365"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9812 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9813 <search_score name="spscore" value="3.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9814 <search_score name="sprank" value="4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9815 <search_score name="expect" value="2.33E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9816 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9817 <search_hit hit_rank="3" peptide="LKYDQERLN" peptide_prev_aa="R" peptide_next_aa="T" protein="XXX_gi|528920173|ref|XP_001788336.2|" num_tot_proteins="2" num_matched_ions="2" tot_num_ions="16" calc_neutral_pep_mass="1177.609137" massdiff="3.027415" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="282">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9818 <search_score name="xcorr" value="0.228"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9819 <search_score name="deltacn" value="0.089"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9820 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9821 <search_score name="spscore" value="5.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9822 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9823 <search_score name="expect" value="2.08E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9824 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9825 <search_hit hit_rank="4" peptide="SVQPVKRTYT" peptide_prev_aa="R" peptide_next_aa="P" protein="XXX_gi|30794280|ref|NP_851335.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="18" calc_neutral_pep_mass="1178.629538" massdiff="2.007013" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="282">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9826 <modification_info modified_peptide="SVQ[129]PVKRTYT">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9827 <mod_aminoacid_mass position="3" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9828 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9829 <search_score name="xcorr" value="0.208"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9830 <search_score name="deltacn" value="0.088"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9831 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9832 <search_score name="spscore" value="4.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9833 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9834 <search_score name="expect" value="2.91E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9835 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9836 <search_hit hit_rank="5" peptide="LREQDYKLN" peptide_prev_aa="R" peptide_next_aa="T" protein="gi|528920173|ref|XP_001788336.2|" num_tot_proteins="2" num_matched_ions="1" tot_num_ions="16" calc_neutral_pep_mass="1177.609137" massdiff="3.027415" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="282">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9837 <search_score name="xcorr" value="0.190"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9838 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9839 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9840 <search_score name="spscore" value="2.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9841 <search_score name="sprank" value="6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9842 <search_score name="expect" value="3.96E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9843 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9844 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9845 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9846 <spectrum_query spectrum="201208-378803.00105.00105.3" spectrumNativeID="sample=1 period=1 cycle=1428 experiment=2" start_scan="105" end_scan="105" precursor_neutral_mass="1752.882718" assumed_charge="3" index="209" retention_time_sec="961.1">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9847 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9848 <search_hit hit_rank="1" peptide="PVLEMYSKLREQMK" peptide_prev_aa="L" peptide_next_aa="T" protein="gi|528968108|ref|XP_005212569.1|" num_tot_proteins="4" num_matched_ions="3" tot_num_ions="52" calc_neutral_pep_mass="1750.910998" massdiff="1.971720" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="1628">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9849 <search_score name="xcorr" value="0.608"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9850 <search_score name="deltacn" value="0.010"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9851 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9852 <search_score name="spscore" value="8.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9853 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9854 <search_score name="expect" value="6.70E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9855 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9856 <search_hit hit_rank="2" peptide="WHRVIAQLETRQSE" peptide_prev_aa="R" peptide_next_aa="L" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="52" calc_neutral_pep_mass="1752.890732" massdiff="-0.008014" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="1628">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9857 <modification_info modified_peptide="WHRVIAQ[129]LETRQSE">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9858 <mod_aminoacid_mass position="7" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9859 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9860 <search_score name="xcorr" value="0.602"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9861 <search_score name="deltacn" value="0.037"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9862 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9863 <search_score name="spscore" value="3.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9864 <search_score name="sprank" value="8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9865 <search_score name="expect" value="6.92E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9866 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9867 <search_hit hit_rank="3" peptide="EGSGTVFGRLQLSGTSR" peptide_prev_aa="R" peptide_next_aa="A" protein="gi|528908812|ref|XP_609847.5|" num_tot_proteins="12" num_matched_ions="1" tot_num_ions="64" calc_neutral_pep_mass="1751.880227" massdiff="1.002491" num_tol_term="2" num_missed_cleavages="1" num_matched_peptides="1628">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9868 <modification_info modified_peptide="EGSGTVFGRLQ[129]LSGTSR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9869 <mod_aminoacid_mass position="11" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9870 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9871 <search_score name="xcorr" value="0.579"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9872 <search_score name="deltacn" value="0.004"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9873 <search_score name="deltacnstar" value="0.003"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9874 <search_score name="spscore" value="0.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9875 <search_score name="sprank" value="25"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9876 <search_score name="expect" value="7.81E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9877 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9878 <search_hit hit_rank="4" peptide="EGSGTVFGRLQLSGTSR" peptide_prev_aa="R" peptide_next_aa="A" protein="gi|528908812|ref|XP_609847.5|" num_tot_proteins="12" num_matched_ions="1" tot_num_ions="64" calc_neutral_pep_mass="1750.896211" massdiff="1.986507" num_tol_term="2" num_missed_cleavages="1" num_matched_peptides="1628">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9879 <search_score name="xcorr" value="0.577"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9880 <search_score name="deltacn" value="0.001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9881 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9882 <search_score name="spscore" value="0.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9883 <search_score name="sprank" value="25"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9884 <search_score name="expect" value="7.90E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9885 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9886 <search_hit hit_rank="5" peptide="LRQQDPPIGEKDQII" peptide_prev_aa="K" peptide_next_aa="L" protein="XXX_gi|528918160|ref|XP_005195085.1|" num_tot_proteins="26" num_matched_ions="2" tot_num_ions="56" calc_neutral_pep_mass="1751.894146" massdiff="0.988572" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="1628">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9887 <modification_info modified_peptide="LRQ[129]Q[129]DPPIGEKDQ[129]II">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9888 <mod_aminoacid_mass position="3" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9889 <mod_aminoacid_mass position="4" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9890 <mod_aminoacid_mass position="13" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9891 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9892 <search_score name="xcorr" value="0.577"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9893 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9894 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9895 <search_score name="spscore" value="4.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9896 <search_score name="sprank" value="6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9897 <search_score name="expect" value="7.91E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9898 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9899 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9900 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9901 <spectrum_query spectrum="201208-378803.00105.00105.2" spectrumNativeID="sample=1 period=1 cycle=1428 experiment=2" start_scan="105" end_scan="105" precursor_neutral_mass="1168.588479" assumed_charge="2" index="210" retention_time_sec="961.1">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9902 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9903 <search_hit hit_rank="1" peptide="RQIMRTAMK" peptide_prev_aa="A" peptide_next_aa="Y" protein="gi|32880221|ref|NP_872593.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="16" calc_neutral_pep_mass="1166.589969" massdiff="1.998510" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="862">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9904 <modification_info modified_peptide="RQ[129]IM[147]RTAM[147]K">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9905 <mod_aminoacid_mass position="2" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9906 <mod_aminoacid_mass position="4" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9907 <mod_aminoacid_mass position="8" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9908 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9909 <search_score name="xcorr" value="0.411"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9910 <search_score name="deltacn" value="0.051"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9911 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9912 <search_score name="spscore" value="3.9"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9913 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9914 <search_score name="expect" value="2.97E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9915 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9916 <search_hit hit_rank="2" peptide="VMAEDGLLFR" peptide_prev_aa="Y" peptide_next_aa="G" protein="gi|139948503|ref|NP_001077142.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="18" calc_neutral_pep_mass="1165.580130" massdiff="3.008349" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="862">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9917 <modification_info modified_peptide="VM[147]AEDGLLFR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9918 <mod_aminoacid_mass position="2" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9919 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9920 <search_score name="xcorr" value="0.390"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9921 <search_score name="deltacn" value="0.240"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9922 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9923 <search_score name="spscore" value="3.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9924 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9925 <search_score name="expect" value="4.13E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9926 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9927 <search_hit hit_rank="3" peptide="YQLEELAFR" peptide_prev_aa="Y" peptide_next_aa="V" protein="gi|528944676|ref|XP_005204734.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="16" calc_neutral_pep_mass="1167.592424" massdiff="0.996055" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="862">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9928 <search_score name="xcorr" value="0.296"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9929 <search_score name="deltacn" value="0.056"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9930 <search_score name="deltacnstar" value="0.013"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9931 <search_score name="spscore" value="1.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9932 <search_score name="sprank" value="7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9933 <search_score name="expect" value="1.79E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9934 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9935 <search_hit hit_rank="4" peptide="YQLEELAFR" peptide_prev_aa="Y" peptide_next_aa="V" protein="gi|528944676|ref|XP_005204734.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="16" calc_neutral_pep_mass="1168.576440" massdiff="0.012039" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="862">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9936 <modification_info modified_peptide="YQ[129]LEELAFR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9937 <mod_aminoacid_mass position="2" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9938 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9939 <search_score name="xcorr" value="0.292"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9940 <search_score name="deltacn" value="0.043"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9941 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9942 <search_score name="spscore" value="1.8"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9943 <search_score name="sprank" value="7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9944 <search_score name="expect" value="1.91E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9945 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9946 <search_hit hit_rank="5" peptide="PPPAPQSLSKM" peptide_prev_aa="R" peptide_next_aa="P" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="20" calc_neutral_pep_mass="1167.595780" massdiff="0.992698" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="862">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9947 <modification_info modified_peptide="PPPAPQSLSKM[147]">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9948 <mod_aminoacid_mass position="11" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9949 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9950 <search_score name="xcorr" value="0.280"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9951 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9952 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9953 <search_score name="spscore" value="1.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9954 <search_score name="sprank" value="10"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9955 <search_score name="expect" value="2.33E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9956 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9957 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9958 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9959 <spectrum_query spectrum="201208-378803.00106.00106.2" spectrumNativeID="sample=1 period=1 cycle=1580 experiment=2" start_scan="106" end_scan="106" precursor_neutral_mass="1064.509975" assumed_charge="2" index="211" retention_time_sec="1042.3">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9960 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9961 <search_hit hit_rank="1" peptide="AEAMKVREE" peptide_prev_aa="-" peptide_next_aa="S" protein="XXX_gi|528968108|ref|XP_005212569.1|" num_tot_proteins="4" num_matched_ions="3" tot_num_ions="16" calc_neutral_pep_mass="1061.517544" massdiff="2.992431" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="724">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9962 <search_score name="xcorr" value="0.568"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9963 <search_score name="deltacn" value="0.278"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9964 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9965 <search_score name="spscore" value="19.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9966 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9967 <search_score name="expect" value="1.00E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9968 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9969 <search_hit hit_rank="2" peptide="AATTMDNLVE" peptide_prev_aa="K" peptide_next_aa="E" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="1" tot_num_ions="18" calc_neutral_pep_mass="1063.485576" massdiff="1.024400" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="724">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9970 <search_score name="xcorr" value="0.410"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9971 <search_score name="deltacn" value="0.158"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9972 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9973 <search_score name="spscore" value="1.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9974 <search_score name="sprank" value="16"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9975 <search_score name="expect" value="5.33E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9976 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9977 <search_hit hit_rank="3" peptide="NMRDAALDR" peptide_prev_aa="E" peptide_next_aa="L" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="16" calc_neutral_pep_mass="1061.492393" massdiff="3.017583" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="724">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9978 <modification_info modified_peptide="N[115]MRDAALDR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9979 <mod_aminoacid_mass position="1" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9980 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9981 <search_score name="xcorr" value="0.346"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9982 <search_score name="deltacn" value="0.027"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9983 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9984 <search_score name="spscore" value="8.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9985 <search_score name="sprank" value="4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9986 <search_score name="expect" value="1.29E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9987 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9988 <search_hit hit_rank="4" peptide="EKGSQLQDR" peptide_prev_aa="Q" peptide_next_aa="W" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="16" calc_neutral_pep_mass="1061.498918" massdiff="3.011057" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="724">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9989 <modification_info modified_peptide="EKGSQ[129]LQ[129]DR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9990 <mod_aminoacid_mass position="5" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9991 <mod_aminoacid_mass position="7" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9992 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9993 <search_score name="xcorr" value="0.336"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9994 <search_score name="deltacn" value="0.022"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9995 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9996 <search_score name="spscore" value="16.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9997 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9998 <search_score name="expect" value="1.47E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
9999 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10000 <search_hit hit_rank="5" peptide="YGSEPSLASR" peptide_prev_aa="V" peptide_next_aa="L" protein="gi|528993971|ref|XP_005219929.1|" num_tot_proteins="4" num_matched_ions="1" tot_num_ions="18" calc_neutral_pep_mass="1065.509088" massdiff="-0.999113" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="724">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10001 <search_score name="xcorr" value="0.329"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10002 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10003 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10004 <search_score name="spscore" value="1.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10005 <search_score name="sprank" value="16"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10006 <search_score name="expect" value="1.63E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10007 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10008 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10009 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10010 <spectrum_query spectrum="201208-378803.00106.00106.3" spectrumNativeID="sample=1 period=1 cycle=1580 experiment=2" start_scan="106" end_scan="106" precursor_neutral_mass="1596.764963" assumed_charge="3" index="212" retention_time_sec="1042.3">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10011 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10012 <search_hit hit_rank="1" peptide="SVPIWNLEGKYYQ" peptide_prev_aa="R" peptide_next_aa="T" protein="XXX_gi|28849955|ref|NP_788795.1|" num_tot_proteins="3" num_matched_ions="4" tot_num_ions="48" calc_neutral_pep_mass="1596.782410" massdiff="-0.017447" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1192">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10013 <modification_info modified_peptide="SVPIWN[115]LEGKYYQ">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10014 <mod_aminoacid_mass position="6" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10015 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10016 <search_score name="xcorr" value="0.672"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10017 <search_score name="deltacn" value="0.111"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10018 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10019 <search_score name="spscore" value="8.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10020 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10021 <search_score name="expect" value="5.77E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10022 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10023 <search_hit hit_rank="2" peptide="SEDNQGIVYAWVGR" peptide_prev_aa="E" peptide_next_aa="A" protein="gi|528921178|ref|XP_592304.7|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="52" calc_neutral_pep_mass="1593.742336" massdiff="3.022627" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="1192">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10024 <modification_info modified_peptide="SEDN[115]QGIVYAWVGR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10025 <mod_aminoacid_mass position="4" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10026 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10027 <search_score name="xcorr" value="0.597"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10028 <search_score name="deltacn" value="0.037"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10029 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10030 <search_score name="spscore" value="5.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10031 <search_score name="sprank" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10032 <search_score name="expect" value="1.11E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10033 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10034 <search_hit hit_rank="3" peptide="SEDNQGIVYAWVGR" peptide_prev_aa="E" peptide_next_aa="A" protein="gi|528921178|ref|XP_592304.7|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="52" calc_neutral_pep_mass="1593.742336" massdiff="3.022627" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="1192">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10035 <modification_info modified_peptide="SEDNQ[129]GIVYAWVGR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10036 <mod_aminoacid_mass position="5" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10037 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10038 <search_score name="xcorr" value="0.597"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10039 <search_score name="deltacn" value="0.037"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10040 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10041 <search_score name="spscore" value="5.1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10042 <search_score name="sprank" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10043 <search_score name="expect" value="1.11E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10044 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10045 <search_hit hit_rank="4" peptide="DGHAGLNEAPEKLDK" peptide_prev_aa="T" peptide_next_aa="Q" protein="gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="56" calc_neutral_pep_mass="1593.763466" massdiff="3.001497" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1192">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10046 <modification_info modified_peptide="DGHAGLN[115]EAPEKLDK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10047 <mod_aminoacid_mass position="7" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10048 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10049 <search_score name="xcorr" value="0.575"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10050 <search_score name="deltacn" value="0.046"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10051 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10052 <search_score name="spscore" value="6.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10053 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10054 <search_score name="expect" value="1.35E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10055 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10056 <search_hit hit_rank="5" peptide="ALSQYPPTPCVFGR" peptide_prev_aa="A" peptide_next_aa="E" protein="XXX_gi|528993971|ref|XP_005219929.1|" num_tot_proteins="4" num_matched_ions="2" tot_num_ions="52" calc_neutral_pep_mass="1593.749730" massdiff="3.015233" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="1192">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10057 <modification_info modified_peptide="ALSQ[129]YPPTPCVFGR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10058 <mod_aminoacid_mass position="4" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10059 <mod_aminoacid_mass position="10" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10060 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10061 <search_score name="xcorr" value="0.549"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10062 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10063 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10064 <search_score name="spscore" value="2.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10065 <search_score name="sprank" value="17"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10066 <search_score name="expect" value="1.69E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10067 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10068 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10069 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10070 <spectrum_query spectrum="201208-378803.00107.00107.2" spectrumNativeID="sample=1 period=1 cycle=1583 experiment=2" start_scan="107" end_scan="107" precursor_neutral_mass="972.466522" assumed_charge="2" index="213" retention_time_sec="1045.9">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10071 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10072 <search_hit hit_rank="1" peptide="ALGSHVIDY" peptide_prev_aa="K" peptide_next_aa="T" protein="XXX_gi|32880221|ref|NP_872593.1|" num_tot_proteins="1" num_matched_ions="0" tot_num_ions="16" calc_neutral_pep_mass="973.486896" massdiff="-1.020374" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="446">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10073 <search_score name="xcorr" value="0.576"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10074 <search_score name="deltacn" value="0.055"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10075 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10076 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10077 <search_score name="sprank" value="24"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10078 <search_score name="expect" value="5.89E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10079 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10080 <search_hit hit_rank="2" peptide="LGESNVQSH" peptide_prev_aa="K" peptide_next_aa="S" protein="XXX_gi|528953246|ref|XP_005208086.1|" num_tot_proteins="1" num_matched_ions="3" tot_num_ions="16" calc_neutral_pep_mass="969.451573" massdiff="3.014949" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="446">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10081 <search_score name="xcorr" value="0.545"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10082 <search_score name="deltacn" value="0.070"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10083 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10084 <search_score name="spscore" value="14.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10085 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10086 <search_score name="expect" value="7.78E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10087 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10088 <search_hit hit_rank="3" peptide="ALDARDDAK" peptide_prev_aa="C" peptide_next_aa="Y" protein="XXX_gi|30794280|ref|NP_851335.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="16" calc_neutral_pep_mass="973.482873" massdiff="-1.016351" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="446">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10089 <search_score name="xcorr" value="0.506"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10090 <search_score name="deltacn" value="0.030"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10091 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10092 <search_score name="spscore" value="1.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10093 <search_score name="sprank" value="22"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10094 <search_score name="expect" value="1.09E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10095 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10096 <search_hit hit_rank="4" peptide="IAADIEDVQ" peptide_prev_aa="R" peptide_next_aa="R" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="0" tot_num_ions="16" calc_neutral_pep_mass="972.476391" massdiff="-0.009869" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="446">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10097 <search_score name="xcorr" value="0.491"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10098 <search_score name="deltacn" value="0.015"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10099 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10100 <search_score name="spscore" value="0.0"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10101 <search_score name="sprank" value="24"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10102 <search_score name="expect" value="1.24E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10103 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10104 <search_hit hit_rank="5" peptide="TQQQENPK" peptide_prev_aa="M" peptide_next_aa="F" protein="gi|528921178|ref|XP_592304.7|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="14" calc_neutral_pep_mass="972.451239" massdiff="0.015283" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="446">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10105 <modification_info modified_peptide="TQ[129]QQENPK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10106 <mod_aminoacid_mass position="2" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10107 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10108 <search_score name="xcorr" value="0.484"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10109 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10110 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10111 <search_score name="spscore" value="10.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10112 <search_score name="sprank" value="7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10113 <search_score name="expect" value="1.32E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10114 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10115 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10116 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10117 <spectrum_query spectrum="201208-378803.00107.00107.3" spectrumNativeID="sample=1 period=1 cycle=1583 experiment=2" start_scan="107" end_scan="107" precursor_neutral_mass="1458.699783" assumed_charge="3" index="214" retention_time_sec="1045.9">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10118 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10119 <search_hit hit_rank="1" peptide="VQIQSNRENLEQ" peptide_prev_aa="R" peptide_next_aa="A" protein="gi|528944676|ref|XP_005204734.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="44" calc_neutral_pep_mass="1459.679068" massdiff="-0.979285" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1316">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10120 <modification_info modified_peptide="VQIQ[129]SN[115]REN[115]LEQ">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10121 <mod_aminoacid_mass position="4" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10122 <mod_aminoacid_mass position="6" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10123 <mod_aminoacid_mass position="9" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10124 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10125 <search_score name="xcorr" value="0.736"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10126 <search_score name="deltacn" value="0.033"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10127 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10128 <search_score name="spscore" value="5.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10129 <search_score name="sprank" value="6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10130 <search_score name="expect" value="1.52E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10131 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10132 <search_hit hit_rank="2" peptide="VQIQSNRENLEQ" peptide_prev_aa="R" peptide_next_aa="A" protein="gi|528944676|ref|XP_005204734.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="44" calc_neutral_pep_mass="1458.695052" massdiff="0.004731" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1316">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10133 <modification_info modified_peptide="VQIQSN[115]REN[115]LEQ">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10134 <mod_aminoacid_mass position="6" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10135 <mod_aminoacid_mass position="9" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10136 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10137 <search_score name="xcorr" value="0.736"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10138 <search_score name="deltacn" value="0.033"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10139 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10140 <search_score name="spscore" value="5.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10141 <search_score name="sprank" value="6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10142 <search_score name="expect" value="1.52E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10143 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10144 <search_hit hit_rank="3" peptide="IQVREMDVLDPQ" peptide_prev_aa="R" peptide_next_aa="S" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="3" num_matched_ions="4" tot_num_ions="44" calc_neutral_pep_mass="1457.718415" massdiff="0.981368" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1316">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10145 <modification_info modified_peptide="IQVREM[147]DVLDPQ">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10146 <mod_aminoacid_mass position="6" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10147 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10148 <search_score name="xcorr" value="0.712"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10149 <search_score name="deltacn" value="0.101"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10150 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10151 <search_score name="spscore" value="10.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10152 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10153 <search_score name="expect" value="1.80E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10154 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10155 <search_hit hit_rank="4" peptide="NKRDFVSFYQR" peptide_prev_aa="R" peptide_next_aa="R" protein="XXX_gi|529012038|ref|XP_005226889.1|" num_tot_proteins="2" num_matched_ions="4" tot_num_ions="40" calc_neutral_pep_mass="1459.720813" massdiff="-1.021030" num_tol_term="2" num_missed_cleavages="2" num_matched_peptides="1316">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10156 <modification_info modified_peptide="N[115]KRDFVSFYQR">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10157 <mod_aminoacid_mass position="1" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10158 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10159 <search_score name="xcorr" value="0.640"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10160 <search_score name="deltacn" value="0.001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10161 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10162 <search_score name="spscore" value="12.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10163 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10164 <search_score name="expect" value="2.97E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10165 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10166 <search_hit hit_rank="5" peptide="ELNERNSQIQVQ" peptide_prev_aa="R" peptide_next_aa="A" protein="XXX_gi|528944676|ref|XP_005204734.1|" num_tot_proteins="3" num_matched_ions="2" tot_num_ions="44" calc_neutral_pep_mass="1458.695052" massdiff="0.004731" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="1316">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10167 <modification_info modified_peptide="ELN[115]ERNSQIQ[129]VQ">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10168 <mod_aminoacid_mass position="3" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10169 <mod_aminoacid_mass position="10" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10170 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10171 <search_score name="xcorr" value="0.640"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10172 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10173 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10174 <search_score name="spscore" value="2.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10175 <search_score name="sprank" value="12"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10176 <search_score name="expect" value="2.98E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10177 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10178 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10179 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10180 <spectrum_query spectrum="201208-378803.00108.00108.3" spectrumNativeID="sample=1 period=1 cycle=1627 experiment=2" start_scan="108" end_scan="108" precursor_neutral_mass="1743.773361" assumed_charge="3" index="215" retention_time_sec="1070.9">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10181 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10182 <search_hit hit_rank="1" peptide="MGPTQGGYFPENVKAM" peptide_prev_aa="-" peptide_next_aa="T" protein="gi|528921178|ref|XP_592304.7|" num_tot_proteins="2" num_matched_ions="1" tot_num_ions="60" calc_neutral_pep_mass="1742.764379" massdiff="1.008982" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="882">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10183 <modification_info modified_peptide="MGPTQ[129]GGYFPENVKAM[147]">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10184 <mod_aminoacid_mass position="5" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10185 <mod_aminoacid_mass position="16" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10186 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10187 <search_score name="xcorr" value="0.557"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10188 <search_score name="deltacn" value="0.165"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10189 <search_score name="deltacnstar" value="0.141"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10190 <search_score name="spscore" value="0.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10191 <search_score name="sprank" value="7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10192 <search_score name="expect" value="4.67E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10193 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10194 <search_hit hit_rank="2" peptide="MGPTQGGYFPENVKAM" peptide_prev_aa="-" peptide_next_aa="T" protein="gi|528921178|ref|XP_592304.7|" num_tot_proteins="2" num_matched_ions="1" tot_num_ions="60" calc_neutral_pep_mass="1741.780363" massdiff="1.992998" num_tol_term="1" num_missed_cleavages="1" num_matched_peptides="882">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10195 <modification_info modified_peptide="MGPTQGGYFPENVKAM[147]">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10196 <mod_aminoacid_mass position="16" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10197 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10198 <search_score name="xcorr" value="0.479"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10199 <search_score name="deltacn" value="0.028"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10200 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10201 <search_score name="spscore" value="0.6"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10202 <search_score name="sprank" value="7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10203 <search_score name="expect" value="1.02E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10204 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10205 <search_hit hit_rank="3" peptide="TTSECLTVTNSSWEK" peptide_prev_aa="V" peptide_next_aa="K" protein="gi|528928354|ref|XP_005193233.1|" num_tot_proteins="1" num_matched_ions="2" tot_num_ions="56" calc_neutral_pep_mass="1743.750912" massdiff="0.022449" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="882">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10206 <modification_info modified_peptide="TTSECLTVTN[115]SSWEK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10207 <mod_aminoacid_mass position="5" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10208 <mod_aminoacid_mass position="10" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10209 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10210 <search_score name="xcorr" value="0.465"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10211 <search_score name="deltacn" value="0.148"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10212 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10213 <search_score name="spscore" value="2.5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10214 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10215 <search_score name="expect" value="1.17E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10216 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10217 <search_hit hit_rank="4" peptide="VLDSKQCFNRGCEK" peptide_prev_aa="P" peptide_next_aa="H" protein="XXX_gi|528908812|ref|XP_609847.5|" num_tot_proteins="12" num_matched_ions="1" tot_num_ions="52" calc_neutral_pep_mass="1743.744388" massdiff="0.028973" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="882">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10218 <modification_info modified_peptide="VLDSKQ[129]CFN[115]RGCEK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10219 <mod_aminoacid_mass position="6" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10220 <mod_aminoacid_mass position="7" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10221 <mod_aminoacid_mass position="9" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10222 <mod_aminoacid_mass position="12" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10223 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10224 <search_score name="xcorr" value="0.396"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10225 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10226 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10227 <search_score name="spscore" value="1.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10228 <search_score name="sprank" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10229 <search_score name="expect" value="2.32E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10230 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10231 <search_hit hit_rank="5" peptide="VLDSKQCFNRGCEK" peptide_prev_aa="P" peptide_next_aa="H" protein="XXX_gi|528908812|ref|XP_609847.5|" num_tot_proteins="12" num_matched_ions="1" tot_num_ions="52" calc_neutral_pep_mass="1742.760372" massdiff="1.012989" num_tol_term="1" num_missed_cleavages="2" num_matched_peptides="882">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10232 <modification_info modified_peptide="VLDSKQ[129]CFNRGCEK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10233 <mod_aminoacid_mass position="6" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10234 <mod_aminoacid_mass position="7" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10235 <mod_aminoacid_mass position="12" mass="161.014665"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10236 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10237 <search_score name="xcorr" value="0.396"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10238 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10239 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10240 <search_score name="spscore" value="1.3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10241 <search_score name="sprank" value="5"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10242 <search_score name="expect" value="2.32E+001"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10243 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10244 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10245 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10246 <spectrum_query spectrum="201208-378803.00108.00108.2" spectrumNativeID="sample=1 period=1 cycle=1627 experiment=2" start_scan="108" end_scan="108" precursor_neutral_mass="1162.515574" assumed_charge="2" index="216" retention_time_sec="1070.9">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10247 <search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10248 <search_hit hit_rank="1" peptide="ISDMNQNIGAT" peptide_prev_aa="K" peptide_next_aa="E" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="4" tot_num_ions="20" calc_neutral_pep_mass="1163.512853" massdiff="-0.997279" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="562">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10249 <modification_info modified_peptide="ISDMN[115]QNIGAT">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10250 <mod_aminoacid_mass position="5" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10251 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10252 <search_score name="xcorr" value="0.721"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10253 <search_score name="deltacn" value="0.290"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10254 <search_score name="deltacnstar" value="0.063"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10255 <search_score name="spscore" value="28.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10256 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10257 <search_score name="expect" value="1.00E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10258 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10259 <search_hit hit_rank="2" peptide="ISDMNQNIGAT" peptide_prev_aa="K" peptide_next_aa="E" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="4" tot_num_ions="20" calc_neutral_pep_mass="1163.512853" massdiff="-0.997279" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="562">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10260 <modification_info modified_peptide="ISDMNQ[129]NIGAT">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10261 <mod_aminoacid_mass position="6" mass="129.042594"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10262 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10263 <search_score name="xcorr" value="0.675"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10264 <search_score name="deltacn" value="0.242"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10265 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10266 <search_score name="spscore" value="28.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10267 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10268 <search_score name="expect" value="1.00E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10269 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10270 <search_hit hit_rank="3" peptide="ISDMNQNIGAT" peptide_prev_aa="K" peptide_next_aa="E" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="4" tot_num_ions="20" calc_neutral_pep_mass="1163.512853" massdiff="-0.997279" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="562">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10271 <modification_info modified_peptide="ISDMNQN[115]IGAT">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10272 <mod_aminoacid_mass position="7" mass="115.026943"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10273 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10274 <search_score name="xcorr" value="0.675"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10275 <search_score name="deltacn" value="0.242"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10276 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10277 <search_score name="spscore" value="28.2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10278 <search_score name="sprank" value="1"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10279 <search_score name="expect" value="1.00E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10280 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10281 <search_hit hit_rank="4" peptide="VIDEGLMDEK" peptide_prev_aa="E" peptide_next_aa="L" protein="gi|528944676|ref|XP_005204734.1|" num_tot_proteins="1" num_matched_ions="1" tot_num_ions="18" calc_neutral_pep_mass="1163.537991" massdiff="-1.022417" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="562">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10282 <modification_info modified_peptide="VIDEGLM[147]DEK">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10283 <mod_aminoacid_mass position="7" mass="147.035385"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10284 </modification_info>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10285 <search_score name="xcorr" value="0.512"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10286 <search_score name="deltacn" value="0.077"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10287 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10288 <search_score name="spscore" value="3.7"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10289 <search_score name="sprank" value="3"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10290 <search_score name="expect" value="2.60E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10291 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10292 <search_hit hit_rank="5" peptide="ISDMNQNIGAT" peptide_prev_aa="K" peptide_next_aa="E" protein="XXX_gi|528944678|ref|XP_005204735.1|" num_tot_proteins="3" num_matched_ions="3" tot_num_ions="20" calc_neutral_pep_mass="1162.528837" massdiff="-0.013263" num_tol_term="1" num_missed_cleavages="0" num_matched_peptides="562">
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10293 <search_score name="xcorr" value="0.473"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10294 <search_score name="deltacn" value="1.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10295 <search_score name="deltacnstar" value="0.000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10296 <search_score name="spscore" value="15.4"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10297 <search_score name="sprank" value="2"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10298 <search_score name="expect" value="4.02E+000"/>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10299 </search_hit>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10300 </search_result>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10301 </spectrum_query>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10302 </msms_run_summary>
dd33125925d9 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/bumbershoot commit 1e51bed3a1c10c67ef0404216608e9333db04c64
galaxyp
parents:
diff changeset
10303 </msms_pipeline_analysis>