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view maldi_macros.xml @ 2:e754c2b545a9 draft

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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/MALDIquant commit d2f311f7fff24e54c565127c40414de708e31b3c
author galaxyp
date Thu, 25 Oct 2018 07:31:55 -0400
parents 0892a051eb17
children 71411ac28268
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<macros>
    <token name="@R_IMPORTS@"><![CDATA[
        library (Cardinal)
        library (MALDIquantForeign)
        library (MALDIquant)
        library (ggplot2)
        library(gridExtra)
    ]]>
    </token>

    <token name="@MADLI_QUANT_DESCRIPTION@"><![CDATA[
MALDIquant_ provides a complete analysis pipeline for MALDI-TOF and other mass spectrometry data.
So far we have only implemented the functionalities for mass spectrometry imaging data.
    ]]>
    </token>

    <token name="@VERSION@">1.18.0</token>

    <xml name="requirements">
        <requirements>
            <requirement type="package" version="1.10.0">bioconductor-cardinal</requirement>
            <requirement type="package" version="0.11.5">r-maldiquantforeign</requirement>
            <requirement type="package" version="1.18">r-maldiquant</requirement>
            <requirement type="package" version="2.2.1">r-ggplot2</requirement>
            <requirement type="package" version="2.2.1">r-gridextra</requirement>
        </requirements>
    </xml>

    <xml name="citation">
    <citations>
        <citation type="doi">10.1093/bioinformatics/bts447</citation>
        <citation type="doi">10.1007/978-3-319-45809-0_6</citation>
    </citations>
    </xml>
</macros>