diff README.rst @ 16:74f5d355d156 draft

planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/maxquant commit 80eb79844e82da22ce44a2ee9c9f202bed0b94d1

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+GalaxyP - MaxQuant
+==================
+
+
+* Home: https://github.com/galaxyproteomics/tools-galaxyp/
+* Tool ID: ``maxquant``
+* Tool Type: ``default``
+
+Description
+-----------
+
+Wrapper for the MaxQuant version available in conda.
+
+Updating
+--------
+
+MaxQuant often changes the layout of its parameters file.
+So changes to the code are likely to be necessary when
+updating to a new version of MaxQuant. The init.py script
+can be used to initialize the tool with a new list of
+modifications or enzymes. From the tool dir run:
+
+./init.py -m MODIFICATIONS.XML -e ENZYMES.XML
+
+The location of these xml files usually is:
+ANACONDA_DIR/bin/conf/