Mercurial > repos > galaxyp > maxquant
diff README.rst @ 16:74f5d355d156 draft
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/maxquant commit 80eb79844e82da22ce44a2ee9c9f202bed0b94d1
author | galaxyp |
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date | Fri, 22 Jul 2022 07:10:28 +0000 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/README.rst Fri Jul 22 07:10:28 2022 +0000 @@ -0,0 +1,27 @@ + +GalaxyP - MaxQuant +================== + + +* Home: https://github.com/galaxyproteomics/tools-galaxyp/ +* Tool ID: ``maxquant`` +* Tool Type: ``default`` + +Description +----------- + +Wrapper for the MaxQuant version available in conda. + +Updating +-------- + +MaxQuant often changes the layout of its parameters file. +So changes to the code are likely to be necessary when +updating to a new version of MaxQuant. The init.py script +can be used to initialize the tool with a new list of +modifications or enzymes. From the tool dir run: + +./init.py -m MODIFICATIONS.XML -e ENZYMES.XML + +The location of these xml files usually is: +ANACONDA_DIR/bin/conf/