diff macros.xml @ 1:8bac3cc5c5de draft

planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/maxquant commit ab4e4f1817080cbe8a031a82cb180610ff140847
author galaxyp
date Sat, 20 Jul 2019 05:01:05 -0400
parents
children dcd39bcc7481
line wrap: on
line diff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/macros.xml	Sat Jul 20 05:01:05 2019 -0400
@@ -0,0 +1,485 @@
+<?xml version="1.0" ?>
+<macros>
+    <token name="@VERSION@">1.6.3.4</token>
+    <token name="@SUBSTITUTION_RX@">[^\w\-\s\.]</token>
+    <xml name="output" token_format="tabular" token_label="default description" token_name="default">
+        <data format="@FORMAT@" label="@LABEL@ for ${on_string}" name="@NAME@">
+            <filter>'@NAME@' in output_opts['output']</filter>
+        </data>
+    </xml>
+    <xml name="output_option" token_label="default label" token_name="default">
+        <option value="@NAME@">@LABEL@</option>
+    </xml>
+    <xml name="mod_option" token_value="default">
+        <option value="@VALUE@">@VALUE@</option>
+    </xml>
+    <xml name="modification">
+        <expand macro="mod_option" value="Acetyl (K)"/>
+        <expand macro="mod_option" value="Acetyl (Protein N-term)"/>
+        <expand macro="mod_option" value="Carbamidomethyl (C)"/>
+        <expand macro="mod_option" value="Oxidation (M)"/>
+        <expand macro="mod_option" value="Phospho (STY)"/>
+        <expand macro="mod_option" value="GlyGly (K)"/>
+        <expand macro="mod_option" value="Methyl (KR)"/>
+        <expand macro="mod_option" value="Dimethyl (KR)"/>
+        <expand macro="mod_option" value="Trimethyl (K)"/>
+        <expand macro="mod_option" value="Pro5"/>
+        <expand macro="mod_option" value="Pro6"/>
+        <expand macro="mod_option" value="Glu-&gt;pyro-Glu"/>
+        <expand macro="mod_option" value="Gln-&gt;pyro-Glu"/>
+        <expand macro="mod_option" value="QQTGG (K)"/>
+        <expand macro="mod_option" value="Deamidation (N)"/>
+        <expand macro="mod_option" value="Deamidation 18O (N)"/>
+        <expand macro="mod_option" value="Deamidation (NQ)"/>
+        <expand macro="mod_option" value="Hydroxyproline"/>
+        <expand macro="mod_option" value="Carbamyl (N-term)"/>
+        <expand macro="mod_option" value="Delta:H(2)C(2) (N-term)"/>
+        <expand macro="mod_option" value="Dioxidation (MW)"/>
+        <expand macro="mod_option" value="Trioxidation (C)"/>
+        <expand macro="mod_option" value="Dethiomethyl (M)"/>
+        <expand macro="mod_option" value="Cation:Na (DE)"/>
+        <expand macro="mod_option" value="Methyl (E)"/>
+        <expand macro="mod_option" value="Dehydrated (ST)"/>
+        <expand macro="mod_option" value="Oxidation (P)"/>
+        <expand macro="mod_option" value="Dimethyl (K)"/>
+        <expand macro="mod_option" value="Amidated (Protein C-term)"/>
+        <expand macro="mod_option" value="Sulfo (STY)"/>
+        <expand macro="mod_option" value="Acetyl (N-term)"/>
+        <expand macro="mod_option" value="Amidated (C-term)"/>
+        <expand macro="mod_option" value="Sulfation (Y)"/>
+        <expand macro="mod_option" value="Phospho (ST)"/>
+        <expand macro="mod_option" value="Cys-Cys"/>
+        <expand macro="mod_option" value="Ala-&gt;Arg"/>
+        <expand macro="mod_option" value="Ala-&gt;Asn"/>
+        <expand macro="mod_option" value="Ala-&gt;Asp"/>
+        <expand macro="mod_option" value="Ala-&gt;Cys"/>
+        <expand macro="mod_option" value="Ala-&gt;Gln"/>
+        <expand macro="mod_option" value="Ala-&gt;Glu"/>
+        <expand macro="mod_option" value="Ala-&gt;Gly"/>
+        <expand macro="mod_option" value="Ala-&gt;His"/>
+        <expand macro="mod_option" value="Ala-&gt;Xle"/>
+        <expand macro="mod_option" value="Ala-&gt;Lys"/>
+        <expand macro="mod_option" value="Ala-&gt;Met"/>
+        <expand macro="mod_option" value="Ala-&gt;Phe"/>
+        <expand macro="mod_option" value="Ala-&gt;Pro"/>
+        <expand macro="mod_option" value="Ala-&gt;Ser"/>
+        <expand macro="mod_option" value="Ala-&gt;Thr"/>
+        <expand macro="mod_option" value="Ala-&gt;Trp"/>
+        <expand macro="mod_option" value="Ala-&gt;Tyr"/>
+        <expand macro="mod_option" value="Ala-&gt;Val"/>
+        <expand macro="mod_option" value="Arg-&gt;Ala"/>
+        <expand macro="mod_option" value="Arg-&gt;Asn"/>
+        <expand macro="mod_option" value="Arg-&gt;Asp"/>
+        <expand macro="mod_option" value="Arg-&gt;Cys"/>
+        <expand macro="mod_option" value="Arg-&gt;Gln"/>
+        <expand macro="mod_option" value="Arg-&gt;Glu"/>
+        <expand macro="mod_option" value="Arg-&gt;Gly"/>
+        <expand macro="mod_option" value="Arg-&gt;His"/>
+        <expand macro="mod_option" value="Arg-&gt;Lys"/>
+        <expand macro="mod_option" value="Arg-&gt;Met"/>
+        <expand macro="mod_option" value="Arg-&gt;Phe"/>
+        <expand macro="mod_option" value="Arg-&gt;Pro"/>
+        <expand macro="mod_option" value="Arg-&gt;Ser"/>
+        <expand macro="mod_option" value="Arg-&gt;Thr"/>
+        <expand macro="mod_option" value="Arg-&gt;Trp"/>
+        <expand macro="mod_option" value="Arg-&gt;Tyr"/>
+        <expand macro="mod_option" value="Arg-&gt;Val"/>
+        <expand macro="mod_option" value="Arg-&gt;Xle"/>
+        <expand macro="mod_option" value="Asn-&gt;Ala"/>
+        <expand macro="mod_option" value="Asn-&gt;Arg"/>
+        <expand macro="mod_option" value="Asn-&gt;Asp"/>
+        <expand macro="mod_option" value="Asn-&gt;Cys"/>
+        <expand macro="mod_option" value="Asn-&gt;Gln"/>
+        <expand macro="mod_option" value="Asn-&gt;Glu"/>
+        <expand macro="mod_option" value="Asn-&gt;Gly"/>
+        <expand macro="mod_option" value="Asn-&gt;His"/>
+        <expand macro="mod_option" value="Asn-&gt;Lys"/>
+        <expand macro="mod_option" value="Asn-&gt;Met"/>
+        <expand macro="mod_option" value="Asn-&gt;Phe"/>
+        <expand macro="mod_option" value="Asn-&gt;Pro"/>
+        <expand macro="mod_option" value="Asn-&gt;Ser"/>
+        <expand macro="mod_option" value="Asn-&gt;Thr"/>
+        <expand macro="mod_option" value="Asn-&gt;Trp"/>
+        <expand macro="mod_option" value="Asn-&gt;Tyr"/>
+        <expand macro="mod_option" value="Asn-&gt;Val"/>
+        <expand macro="mod_option" value="Asn-&gt;Xle"/>
+        <expand macro="mod_option" value="Asp-&gt;Ala"/>
+        <expand macro="mod_option" value="Asp-&gt;Arg"/>
+        <expand macro="mod_option" value="Asp-&gt;Asn"/>
+        <expand macro="mod_option" value="Asp-&gt;Cys"/>
+        <expand macro="mod_option" value="Asp-&gt;Gln"/>
+        <expand macro="mod_option" value="Asp-&gt;Glu"/>
+        <expand macro="mod_option" value="Asp-&gt;Gly"/>
+        <expand macro="mod_option" value="Asp-&gt;His"/>
+        <expand macro="mod_option" value="Asp-&gt;Lys"/>
+        <expand macro="mod_option" value="Asp-&gt;Met"/>
+        <expand macro="mod_option" value="Asp-&gt;Phe"/>
+        <expand macro="mod_option" value="Asp-&gt;Pro"/>
+        <expand macro="mod_option" value="Asp-&gt;Ser"/>
+        <expand macro="mod_option" value="Asp-&gt;Thr"/>
+        <expand macro="mod_option" value="Asp-&gt;Trp"/>
+        <expand macro="mod_option" value="Asp-&gt;Tyr"/>
+        <expand macro="mod_option" value="Asp-&gt;Val"/>
+        <expand macro="mod_option" value="Asp-&gt;Xle"/>
+        <expand macro="mod_option" value="Cys-&gt;Ala"/>
+        <expand macro="mod_option" value="Cys-&gt;Arg"/>
+        <expand macro="mod_option" value="Cys-&gt;Asn"/>
+        <expand macro="mod_option" value="Cys-&gt;Asp"/>
+        <expand macro="mod_option" value="Cys-&gt;Gln"/>
+        <expand macro="mod_option" value="Cys-&gt;Glu"/>
+        <expand macro="mod_option" value="Cys-&gt;Gly"/>
+        <expand macro="mod_option" value="Cys-&gt;His"/>
+        <expand macro="mod_option" value="Cys-&gt;Lys"/>
+        <expand macro="mod_option" value="Cys-&gt;Met"/>
+        <expand macro="mod_option" value="Cys-&gt;Phe"/>
+        <expand macro="mod_option" value="Cys-&gt;Pro"/>
+        <expand macro="mod_option" value="Cys-&gt;Ser"/>
+        <expand macro="mod_option" value="Cys-&gt;Thr"/>
+        <expand macro="mod_option" value="Cys-&gt;Trp"/>
+        <expand macro="mod_option" value="Cys-&gt;Tyr"/>
+        <expand macro="mod_option" value="Cys-&gt;Val"/>
+        <expand macro="mod_option" value="Cys-&gt;Xle"/>
+        <expand macro="mod_option" value="Gln-&gt;Ala"/>
+        <expand macro="mod_option" value="Gln-&gt;Arg"/>
+        <expand macro="mod_option" value="Gln-&gt;Asn"/>
+        <expand macro="mod_option" value="Gln-&gt;Asp"/>
+        <expand macro="mod_option" value="Gln-&gt;Cys"/>
+        <expand macro="mod_option" value="Gln-&gt;Glu"/>
+        <expand macro="mod_option" value="Gln-&gt;Gly"/>
+        <expand macro="mod_option" value="Gln-&gt;His"/>
+        <expand macro="mod_option" value="Gln-&gt;Lys"/>
+        <expand macro="mod_option" value="Gln-&gt;Met"/>
+        <expand macro="mod_option" value="Gln-&gt;Phe"/>
+        <expand macro="mod_option" value="Gln-&gt;Pro"/>
+        <expand macro="mod_option" value="Gln-&gt;Ser"/>
+        <expand macro="mod_option" value="Gln-&gt;Thr"/>
+        <expand macro="mod_option" value="Gln-&gt;Trp"/>
+        <expand macro="mod_option" value="Gln-&gt;Tyr"/>
+        <expand macro="mod_option" value="Gln-&gt;Val"/>
+        <expand macro="mod_option" value="Gln-&gt;Xle"/>
+        <expand macro="mod_option" value="Glu-&gt;Ala"/>
+        <expand macro="mod_option" value="Glu-&gt;Arg"/>
+        <expand macro="mod_option" value="Glu-&gt;Asn"/>
+        <expand macro="mod_option" value="Glu-&gt;Asp"/>
+        <expand macro="mod_option" value="Glu-&gt;Cys"/>
+        <expand macro="mod_option" value="Glu-&gt;Gln"/>
+        <expand macro="mod_option" value="Glu-&gt;Gly"/>
+        <expand macro="mod_option" value="Glu-&gt;His"/>
+        <expand macro="mod_option" value="Glu-&gt;Lys"/>
+        <expand macro="mod_option" value="Glu-&gt;Met"/>
+        <expand macro="mod_option" value="Glu-&gt;Phe"/>
+        <expand macro="mod_option" value="Glu-&gt;Pro"/>
+        <expand macro="mod_option" value="Glu-&gt;Ser"/>
+        <expand macro="mod_option" value="Glu-&gt;Thr"/>
+        <expand macro="mod_option" value="Glu-&gt;Trp"/>
+        <expand macro="mod_option" value="Glu-&gt;Tyr"/>
+        <expand macro="mod_option" value="Glu-&gt;Val"/>
+        <expand macro="mod_option" value="Glu-&gt;Xle"/>
+        <expand macro="mod_option" value="Gly-&gt;Ala"/>
+        <expand macro="mod_option" value="Gly-&gt;Arg"/>
+        <expand macro="mod_option" value="Gly-&gt;Asn"/>
+        <expand macro="mod_option" value="Gly-&gt;Asp"/>
+        <expand macro="mod_option" value="Gly-&gt;Cys"/>
+        <expand macro="mod_option" value="Gly-&gt;Gln"/>
+        <expand macro="mod_option" value="Gly-&gt;Glu"/>
+        <expand macro="mod_option" value="Gly-&gt;His"/>
+        <expand macro="mod_option" value="Gly-&gt;Lys"/>
+        <expand macro="mod_option" value="Gly-&gt;Met"/>
+        <expand macro="mod_option" value="Gly-&gt;Phe"/>
+        <expand macro="mod_option" value="Gly-&gt;Pro"/>
+        <expand macro="mod_option" value="Gly-&gt;Ser"/>
+        <expand macro="mod_option" value="Gly-&gt;Thr"/>
+        <expand macro="mod_option" value="Gly-&gt;Trp"/>
+        <expand macro="mod_option" value="Gly-&gt;Tyr"/>
+        <expand macro="mod_option" value="Gly-&gt;Val"/>
+        <expand macro="mod_option" value="Gly-&gt;Xle"/>
+        <expand macro="mod_option" value="His-&gt;Ala"/>
+        <expand macro="mod_option" value="His-&gt;Arg"/>
+        <expand macro="mod_option" value="His-&gt;Asn"/>
+        <expand macro="mod_option" value="His-&gt;Asp"/>
+        <expand macro="mod_option" value="His-&gt;Cys"/>
+        <expand macro="mod_option" value="His-&gt;Gln"/>
+        <expand macro="mod_option" value="His-&gt;Glu"/>
+        <expand macro="mod_option" value="His-&gt;Gly"/>
+        <expand macro="mod_option" value="His-&gt;Lys"/>
+        <expand macro="mod_option" value="His-&gt;Met"/>
+        <expand macro="mod_option" value="His-&gt;Phe"/>
+        <expand macro="mod_option" value="His-&gt;Pro"/>
+        <expand macro="mod_option" value="His-&gt;Ser"/>
+        <expand macro="mod_option" value="His-&gt;Thr"/>
+        <expand macro="mod_option" value="His-&gt;Trp"/>
+        <expand macro="mod_option" value="His-&gt;Tyr"/>
+        <expand macro="mod_option" value="His-&gt;Val"/>
+        <expand macro="mod_option" value="His-&gt;Xle"/>
+        <expand macro="mod_option" value="Lys-&gt;Ala"/>
+        <expand macro="mod_option" value="Lys-&gt;Arg"/>
+        <expand macro="mod_option" value="Lys-&gt;Asn"/>
+        <expand macro="mod_option" value="Lys-&gt;Asp"/>
+        <expand macro="mod_option" value="Lys-&gt;Cys"/>
+        <expand macro="mod_option" value="Lys-&gt;Gln"/>
+        <expand macro="mod_option" value="Lys-&gt;Glu"/>
+        <expand macro="mod_option" value="Lys-&gt;Gly"/>
+        <expand macro="mod_option" value="Lys-&gt;His"/>
+        <expand macro="mod_option" value="Lys-&gt;Met"/>
+        <expand macro="mod_option" value="Lys-&gt;Phe"/>
+        <expand macro="mod_option" value="Lys-&gt;Pro"/>
+        <expand macro="mod_option" value="Lys-&gt;Ser"/>
+        <expand macro="mod_option" value="Lys-&gt;Thr"/>
+        <expand macro="mod_option" value="Lys-&gt;Trp"/>
+        <expand macro="mod_option" value="Lys-&gt;Tyr"/>
+        <expand macro="mod_option" value="Lys-&gt;Val"/>
+        <expand macro="mod_option" value="Lys-&gt;Xle"/>
+        <expand macro="mod_option" value="Met-&gt;Ala"/>
+        <expand macro="mod_option" value="Met-&gt;Arg"/>
+        <expand macro="mod_option" value="Met-&gt;Asn"/>
+        <expand macro="mod_option" value="Met-&gt;Asp"/>
+        <expand macro="mod_option" value="Met-&gt;Cys"/>
+        <expand macro="mod_option" value="Met-&gt;Gln"/>
+        <expand macro="mod_option" value="Met-&gt;Glu"/>
+        <expand macro="mod_option" value="Met-&gt;Gly"/>
+        <expand macro="mod_option" value="Met-&gt;His"/>
+        <expand macro="mod_option" value="Met-&gt;Lys"/>
+        <expand macro="mod_option" value="Met-&gt;Phe"/>
+        <expand macro="mod_option" value="Met-&gt;Pro"/>
+        <expand macro="mod_option" value="Met-&gt;Ser"/>
+        <expand macro="mod_option" value="Met-&gt;Thr"/>
+        <expand macro="mod_option" value="Met-&gt;Trp"/>
+        <expand macro="mod_option" value="Met-&gt;Tyr"/>
+        <expand macro="mod_option" value="Met-&gt;Val"/>
+        <expand macro="mod_option" value="Met-&gt;Xle"/>
+        <expand macro="mod_option" value="Phe-&gt;Ala"/>
+        <expand macro="mod_option" value="Phe-&gt;Arg"/>
+        <expand macro="mod_option" value="Phe-&gt;Asn"/>
+        <expand macro="mod_option" value="Phe-&gt;Asp"/>
+        <expand macro="mod_option" value="Phe-&gt;Cys"/>
+        <expand macro="mod_option" value="Phe-&gt;Gln"/>
+        <expand macro="mod_option" value="Phe-&gt;Glu"/>
+        <expand macro="mod_option" value="Phe-&gt;Gly"/>
+        <expand macro="mod_option" value="Phe-&gt;His"/>
+        <expand macro="mod_option" value="Phe-&gt;Lys"/>
+        <expand macro="mod_option" value="Phe-&gt;Met"/>
+        <expand macro="mod_option" value="Phe-&gt;Pro"/>
+        <expand macro="mod_option" value="Phe-&gt;Ser"/>
+        <expand macro="mod_option" value="Phe-&gt;Thr"/>
+        <expand macro="mod_option" value="Phe-&gt;Trp"/>
+        <expand macro="mod_option" value="Phe-&gt;Tyr"/>
+        <expand macro="mod_option" value="Phe-&gt;Val"/>
+        <expand macro="mod_option" value="Phe-&gt;Xle"/>
+        <expand macro="mod_option" value="Pro-&gt;Ala"/>
+        <expand macro="mod_option" value="Pro-&gt;Arg"/>
+        <expand macro="mod_option" value="Pro-&gt;Asn"/>
+        <expand macro="mod_option" value="Pro-&gt;Asp"/>
+        <expand macro="mod_option" value="Pro-&gt;Cys"/>
+        <expand macro="mod_option" value="Pro-&gt;Gln"/>
+        <expand macro="mod_option" value="Pro-&gt;Glu"/>
+        <expand macro="mod_option" value="Pro-&gt;Gly"/>
+        <expand macro="mod_option" value="Pro-&gt;His"/>
+        <expand macro="mod_option" value="Pro-&gt;Lys"/>
+        <expand macro="mod_option" value="Pro-&gt;Met"/>
+        <expand macro="mod_option" value="Pro-&gt;Phe"/>
+        <expand macro="mod_option" value="Pro-&gt;Ser"/>
+        <expand macro="mod_option" value="Pro-&gt;Thr"/>
+        <expand macro="mod_option" value="Pro-&gt;Trp"/>
+        <expand macro="mod_option" value="Pro-&gt;Tyr"/>
+        <expand macro="mod_option" value="Pro-&gt;Val"/>
+        <expand macro="mod_option" value="Pro-&gt;Xle"/>
+        <expand macro="mod_option" value="Ser-&gt;Ala"/>
+        <expand macro="mod_option" value="Ser-&gt;Arg"/>
+        <expand macro="mod_option" value="Ser-&gt;Asn"/>
+        <expand macro="mod_option" value="Ser-&gt;Asp"/>
+        <expand macro="mod_option" value="Ser-&gt;Cys"/>
+        <expand macro="mod_option" value="Ser-&gt;Gln"/>
+        <expand macro="mod_option" value="Ser-&gt;Glu"/>
+        <expand macro="mod_option" value="Ser-&gt;Gly"/>
+        <expand macro="mod_option" value="Ser-&gt;His"/>
+        <expand macro="mod_option" value="Ser-&gt;Lys"/>
+        <expand macro="mod_option" value="Ser-&gt;Met"/>
+        <expand macro="mod_option" value="Ser-&gt;Phe"/>
+        <expand macro="mod_option" value="Ser-&gt;Pro"/>
+        <expand macro="mod_option" value="Ser-&gt;Thr"/>
+        <expand macro="mod_option" value="Ser-&gt;Trp"/>
+        <expand macro="mod_option" value="Ser-&gt;Tyr"/>
+        <expand macro="mod_option" value="Ser-&gt;Val"/>
+        <expand macro="mod_option" value="Ser-&gt;Xle"/>
+        <expand macro="mod_option" value="Thr-&gt;Ala"/>
+        <expand macro="mod_option" value="Thr-&gt;Arg"/>
+        <expand macro="mod_option" value="Thr-&gt;Asn"/>
+        <expand macro="mod_option" value="Thr-&gt;Asp"/>
+        <expand macro="mod_option" value="Thr-&gt;Cys"/>
+        <expand macro="mod_option" value="Thr-&gt;Gln"/>
+        <expand macro="mod_option" value="Thr-&gt;Glu"/>
+        <expand macro="mod_option" value="Thr-&gt;Gly"/>
+        <expand macro="mod_option" value="Thr-&gt;His"/>
+        <expand macro="mod_option" value="Thr-&gt;Lys"/>
+        <expand macro="mod_option" value="Thr-&gt;Met"/>
+        <expand macro="mod_option" value="Thr-&gt;Phe"/>
+        <expand macro="mod_option" value="Thr-&gt;Pro"/>
+        <expand macro="mod_option" value="Thr-&gt;Ser"/>
+        <expand macro="mod_option" value="Thr-&gt;Trp"/>
+        <expand macro="mod_option" value="Thr-&gt;Tyr"/>
+        <expand macro="mod_option" value="Thr-&gt;Val"/>
+        <expand macro="mod_option" value="Thr-&gt;Xle"/>
+        <expand macro="mod_option" value="Trp-&gt;Ala"/>
+        <expand macro="mod_option" value="Trp-&gt;Arg"/>
+        <expand macro="mod_option" value="Trp-&gt;Asn"/>
+        <expand macro="mod_option" value="Trp-&gt;Asp"/>
+        <expand macro="mod_option" value="Trp-&gt;Cys"/>
+        <expand macro="mod_option" value="Trp-&gt;Gln"/>
+        <expand macro="mod_option" value="Trp-&gt;Glu"/>
+        <expand macro="mod_option" value="Trp-&gt;Gly"/>
+        <expand macro="mod_option" value="Trp-&gt;His"/>
+        <expand macro="mod_option" value="Trp-&gt;Lys"/>
+        <expand macro="mod_option" value="Trp-&gt;Met"/>
+        <expand macro="mod_option" value="Trp-&gt;Phe"/>
+        <expand macro="mod_option" value="Trp-&gt;Pro"/>
+        <expand macro="mod_option" value="Trp-&gt;Ser"/>
+        <expand macro="mod_option" value="Trp-&gt;Thr"/>
+        <expand macro="mod_option" value="Trp-&gt;Tyr"/>
+        <expand macro="mod_option" value="Trp-&gt;Val"/>
+        <expand macro="mod_option" value="Trp-&gt;Xle"/>
+        <expand macro="mod_option" value="Tyr-&gt;Ala"/>
+        <expand macro="mod_option" value="Tyr-&gt;Arg"/>
+        <expand macro="mod_option" value="Tyr-&gt;Asn"/>
+        <expand macro="mod_option" value="Tyr-&gt;Asp"/>
+        <expand macro="mod_option" value="Tyr-&gt;Cys"/>
+        <expand macro="mod_option" value="Tyr-&gt;Gln"/>
+        <expand macro="mod_option" value="Tyr-&gt;Glu"/>
+        <expand macro="mod_option" value="Tyr-&gt;Gly"/>
+        <expand macro="mod_option" value="Tyr-&gt;His"/>
+        <expand macro="mod_option" value="Tyr-&gt;Lys"/>
+        <expand macro="mod_option" value="Tyr-&gt;Met"/>
+        <expand macro="mod_option" value="Tyr-&gt;Phe"/>
+        <expand macro="mod_option" value="Tyr-&gt;Pro"/>
+        <expand macro="mod_option" value="Tyr-&gt;Ser"/>
+        <expand macro="mod_option" value="Tyr-&gt;Thr"/>
+        <expand macro="mod_option" value="Tyr-&gt;Trp"/>
+        <expand macro="mod_option" value="Tyr-&gt;Val"/>
+        <expand macro="mod_option" value="Tyr-&gt;Xle"/>
+        <expand macro="mod_option" value="Val-&gt;Ala"/>
+        <expand macro="mod_option" value="Val-&gt;Arg"/>
+        <expand macro="mod_option" value="Val-&gt;Asn"/>
+        <expand macro="mod_option" value="Val-&gt;Asp"/>
+        <expand macro="mod_option" value="Val-&gt;Cys"/>
+        <expand macro="mod_option" value="Val-&gt;Gln"/>
+        <expand macro="mod_option" value="Val-&gt;Glu"/>
+        <expand macro="mod_option" value="Val-&gt;Gly"/>
+        <expand macro="mod_option" value="Val-&gt;His"/>
+        <expand macro="mod_option" value="Val-&gt;Lys"/>
+        <expand macro="mod_option" value="Val-&gt;Met"/>
+        <expand macro="mod_option" value="Val-&gt;Phe"/>
+        <expand macro="mod_option" value="Val-&gt;Pro"/>
+        <expand macro="mod_option" value="Val-&gt;Ser"/>
+        <expand macro="mod_option" value="Val-&gt;Thr"/>
+        <expand macro="mod_option" value="Val-&gt;Trp"/>
+        <expand macro="mod_option" value="Val-&gt;Tyr"/>
+        <expand macro="mod_option" value="Val-&gt;Xle"/>
+        <expand macro="mod_option" value="Xle-&gt;Ala"/>
+        <expand macro="mod_option" value="Xle-&gt;Arg"/>
+        <expand macro="mod_option" value="Xle-&gt;Asn"/>
+        <expand macro="mod_option" value="Xle-&gt;Asp"/>
+        <expand macro="mod_option" value="Xle-&gt;Cys"/>
+        <expand macro="mod_option" value="Xle-&gt;Gln"/>
+        <expand macro="mod_option" value="Xle-&gt;Glu"/>
+        <expand macro="mod_option" value="Xle-&gt;Gly"/>
+        <expand macro="mod_option" value="Xle-&gt;His"/>
+        <expand macro="mod_option" value="Xle-&gt;Lys"/>
+        <expand macro="mod_option" value="Xle-&gt;Met"/>
+        <expand macro="mod_option" value="Xle-&gt;Phe"/>
+        <expand macro="mod_option" value="Xle-&gt;Pro"/>
+        <expand macro="mod_option" value="Xle-&gt;Ser"/>
+        <expand macro="mod_option" value="Xle-&gt;Thr"/>
+        <expand macro="mod_option" value="Xle-&gt;Trp"/>
+        <expand macro="mod_option" value="Xle-&gt;Tyr"/>
+        <expand macro="mod_option" value="Xle-&gt;Val"/>
+        <expand macro="mod_option" value="CamCys-&gt;Ala"/>
+        <expand macro="mod_option" value="CamCys-&gt;Arg"/>
+        <expand macro="mod_option" value="CamCys-&gt;Asn"/>
+        <expand macro="mod_option" value="CamCys-&gt;Asp"/>
+        <expand macro="mod_option" value="CamCys-&gt;Gln"/>
+        <expand macro="mod_option" value="CamCys-&gt;Glu"/>
+        <expand macro="mod_option" value="CamCys-&gt;Gly"/>
+        <expand macro="mod_option" value="CamCys-&gt;His"/>
+        <expand macro="mod_option" value="CamCys-&gt;Lys"/>
+        <expand macro="mod_option" value="CamCys-&gt;Met"/>
+        <expand macro="mod_option" value="CamCys-&gt;Phe"/>
+        <expand macro="mod_option" value="CamCys-&gt;Pro"/>
+        <expand macro="mod_option" value="CamCys-&gt;Ser"/>
+        <expand macro="mod_option" value="CamCys-&gt;Thr"/>
+        <expand macro="mod_option" value="CamCys-&gt;Trp"/>
+        <expand macro="mod_option" value="CamCys-&gt;Tyr"/>
+        <expand macro="mod_option" value="CamCys-&gt;Val"/>
+        <expand macro="mod_option" value="CamCys-&gt;Xle"/>
+        <expand macro="mod_option" value="Ala-&gt;CamCys"/>
+        <expand macro="mod_option" value="Arg-&gt;CamCys"/>
+        <expand macro="mod_option" value="Asn-&gt;CamCys"/>
+        <expand macro="mod_option" value="Asp-&gt;CamCys"/>
+        <expand macro="mod_option" value="Gln-&gt;CamCys"/>
+        <expand macro="mod_option" value="Glu-&gt;CamCys"/>
+        <expand macro="mod_option" value="Gly-&gt;CamCys"/>
+        <expand macro="mod_option" value="His-&gt;CamCys"/>
+        <expand macro="mod_option" value="Lys-&gt;CamCys"/>
+        <expand macro="mod_option" value="Met-&gt;CamCys"/>
+        <expand macro="mod_option" value="Phe-&gt;CamCys"/>
+        <expand macro="mod_option" value="Pro-&gt;CamCys"/>
+        <expand macro="mod_option" value="Ser-&gt;CamCys"/>
+        <expand macro="mod_option" value="Thr-&gt;CamCys"/>
+        <expand macro="mod_option" value="Trp-&gt;CamCys"/>
+        <expand macro="mod_option" value="Tyr-&gt;CamCys"/>
+        <expand macro="mod_option" value="Val-&gt;CamCys"/>
+        <expand macro="mod_option" value="Xle-&gt;CamCys"/>
+        <expand macro="mod_option" value="Cysteinyl"/>
+        <expand macro="mod_option" value="Cysteinyl - carbamidomethyl"/>
+    </xml>
+    <xml name="label">
+        <expand macro="mod_option" value="Arg6"/>
+        <expand macro="mod_option" value="Arg10"/>
+        <expand macro="mod_option" value="Lys4"/>
+        <expand macro="mod_option" value="Lys6"/>
+        <expand macro="mod_option" value="Lys8"/>
+        <expand macro="mod_option" value="DimethLys0"/>
+        <expand macro="mod_option" value="DimethNter0"/>
+        <expand macro="mod_option" value="DimethLys4"/>
+        <expand macro="mod_option" value="DimethNter4"/>
+        <expand macro="mod_option" value="DimethLys8"/>
+        <expand macro="mod_option" value="DimethNter8"/>
+        <expand macro="mod_option" value="18O"/>
+        <expand macro="mod_option" value="ICAT-0"/>
+        <expand macro="mod_option" value="ICAT-9"/>
+        <expand macro="mod_option" value="ICPL-Lys0"/>
+        <expand macro="mod_option" value="ICPL-Nter0"/>
+        <expand macro="mod_option" value="ICPL-Lys4"/>
+        <expand macro="mod_option" value="ICPL-Nter4"/>
+        <expand macro="mod_option" value="ICPL-Lys6"/>
+        <expand macro="mod_option" value="ICPL-Nter6"/>
+        <expand macro="mod_option" value="ICPL-Lys10"/>
+        <expand macro="mod_option" value="ICPL-Nter10"/>
+        <expand macro="mod_option" value="mTRAQ-Lys0"/>
+        <expand macro="mod_option" value="mTRAQ-Nter0"/>
+        <expand macro="mod_option" value="mTRAQ-Lys4"/>
+        <expand macro="mod_option" value="mTRAQ-Nter4"/>
+        <expand macro="mod_option" value="mTRAQ-Lys8"/>
+        <expand macro="mod_option" value="mTRAQ-Nter8"/>
+        <expand macro="mod_option" value="DimethLys2"/>
+        <expand macro="mod_option" value="DimethNter2"/>
+        <expand macro="mod_option" value="DimethLys6"/>
+        <expand macro="mod_option" value="DimethNter6"/>
+        <expand macro="mod_option" value="Leu7"/>
+        <expand macro="mod_option" value="Ile7"/>
+    </xml>
+    <xml name="proteases">
+        <expand macro="mod_option" value="Trypsin"/>
+        <expand macro="mod_option" value="Trypsin/P"/>
+        <expand macro="mod_option" value="LysC"/>
+        <expand macro="mod_option" value="LysC/P"/>
+        <expand macro="mod_option" value="D.P"/>
+        <expand macro="mod_option" value="ArgC"/>
+        <expand macro="mod_option" value="AspC"/>
+        <expand macro="mod_option" value="GluC"/>
+        <expand macro="mod_option" value="GluN"/>
+        <expand macro="mod_option" value="AspN"/>
+        <expand macro="mod_option" value="LysN"/>
+        <expand macro="mod_option" value="Chymotrypsin+"/>
+        <expand macro="mod_option" value="Chymotrypsin"/>
+    </xml>
+</macros>
+