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view test-data/01/combined/txt/peptides.txt @ 4:dcd39bcc7481 draft

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"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/maxquant commit da342a782ccc391b87fb4fead956b7b3cbd21258"
author galaxyp
date Sat, 11 Apr 2020 11:49:19 -0400
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children 0839f84def5e
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Sequence	N-term cleavage window	C-term cleavage window	Amino acid before	First amino acid	Second amino acid	Second last amino acid	Last amino acid	Amino acid after	A Count	R Count	N Count	D Count	C Count	Q Count	E Count	G Count	H Count	I Count	L Count	K Count	M Count	F Count	P Count	S Count	T Count	W Count	Y Count	V Count	U Count	O Count	Length	Missed cleavages	Mass	Proteins	Leading razor protein	Start position	End position	Unique (Groups)	Unique (Proteins)	Charges	PEP	Score	Experiment BSA_min_23.mzXML	Intensity	Intensity BSA_min_23.mzXML	Reverse	Potential contaminant	id	Protein group IDs	Mod. peptide IDs	Evidence IDs	MS/MS IDs	Best MS/MS	Oxidation (M) site IDs	MS/MS Count
DSFDIIK	NHADIIFDITDGNLRDSFDIIKRYMDGMTV	DITDGNLRDSFDIIKRYMDGMTVGVVRQVR	R	D	S	I	K	R	0	0	0	2	0	0	0	0	0	2	0	1	0	1	0	1	0	0	0	0	0	0	7	0	836.42798	CON__ENSEMBL:ENSBTAP00000016046	CON__ENSEMBL:ENSBTAP00000016046	646	652	yes	yes	2	8.9583E-05	0	1	768320	768320		+	0	2	0	0	0	0		1
LLESEECR	SLKLALDMEIATYRKLLESEECRMSGEYPN	EIATYRKLLESEECRMSGEYPNSVSISVIS	K	L	L	C	R	M	0	1	0	0	1	0	3	0	0	0	2	0	0	0	0	1	0	0	0	0	0	0	8	0	1034.4703	CON__Q14CN4-1;CON__Q3SY84;CON__Q9R0H5	CON__Q14CN4-1	430	437	yes	no	2	0.010121	1.6313	1	0	0		+	1	6	1	1	1	1		1
LVTDLTK	LSQKFPKAEFVEVTKLVTDLTKVHKECCHG	AEFVEVTKLVTDLTKVHKECCHGDLLECAD	K	L	V	T	K	V	0	0	0	1	0	0	0	0	0	0	2	1	0	0	0	0	2	0	0	1	0	0	7	0	788.46437	CON__P02769;bsa;CON__P02768-1	CON__P02769	257	263	yes	no	2	0.005963	0	1	0	0		+	2	0	2	2	2	2		1
QLELEKQLEK	QERKERERQEQERKRQLELEKQLEKQRELE	QERKRQLELEKQLEKQRELERQREEERRKE	R	Q	L	E	K	Q	0	0	0	0	0	2	3	0	0	0	3	2	0	0	0	0	0	0	0	0	0	0	10	1	1256.6976	CON__ENSEMBL:ENSBTAP00000001528	CON__ENSEMBL:ENSBTAP00000001528	408	417	yes	yes	2;3	0.0003393	0	2	142430	142430		+	3	1	3	3;4	3;4;5	3		2
SLSAIRER	RLAVYQAGASEGAERSLSAIRERFGPLVEQ	ASEGAERSLSAIRERFGPLVEQGQSRAATL	R	S	L	E	R	F	1	2	0	0	0	0	1	0	0	1	1	0	0	0	0	2	0	0	0	0	0	0	8	1	930.52468	CON__Q03247	CON__Q03247	190	197	yes	yes	2	0.015457	0	1	33499	33499		+	4	5	4	5	6	6		0
SQTSHRGYSASSAR	______________________________	KSQTSHRGYSASSARVPGLNRSGFSSVSVC	K	S	Q	A	R	V	2	2	0	0	0	1	0	1	1	0	0	0	0	0	0	5	1	0	1	0	0	0	14	1	1493.6971	CON__P50446	CON__P50446	9	22	yes	yes	2	0.0091697	0	1	59701	59701		+	5	4	5	6	7	7		1
TLGPWGQR	LRPLLLALLLASACRTLGPWGQRDDGGGEP	LLASACRTLGPWGQRDDGGGEPESMEPRWG	R	T	L	Q	R	D	0	1	0	0	0	1	0	2	0	0	1	0	0	0	1	0	1	1	0	0	0	0	8	0	913.477	CON__ENSEMBL:ENSBTAP00000018574	CON__ENSEMBL:ENSBTAP00000018574	20	27	yes	yes	2	0.00018307	0	1	61894	61894		+	6	3	6	7	8	8		1