# HG changeset patch # User galaxyp # Date 1613769881 0 # Node ID 37d669de28287c56901d1b638972188c19af9fcb # Parent ea0a1d50c83fc9a42f4a1a978485db935d1c563f "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/maxquant commit 5e4f8567c0145de8c6f9344fe4ee4c3bf2a81e59" diff -r ea0a1d50c83f -r 37d669de2828 create_mqpar.py --- a/create_mqpar.py Wed Jun 03 15:32:53 2020 -0400 +++ b/create_mqpar.py Fri Feb 19 21:24:41 2021 +0000 @@ -4,8 +4,8 @@ import argparse import os + import yaml - from mqparam import MQParam parser = argparse.ArgumentParser() diff -r ea0a1d50c83f -r 37d669de2828 mqparam.py --- a/mqparam.py Wed Jun 03 15:32:53 2020 -0400 +++ b/mqparam.py Fri Feb 19 21:24:41 2021 +0000 @@ -6,11 +6,12 @@ import ntpath import os import re -import yaml import xml.etree.ElementTree as ET from itertools import zip_longest from xml.dom import minidom +import yaml + def et_add_child(el, name, text, attrib=None): "Add a child element to an xml.etree.ElementTree.Element" diff -r ea0a1d50c83f -r 37d669de2828 test_mqparam.py --- a/test_mqparam.py Wed Jun 03 15:32:53 2020 -0400 +++ b/test_mqparam.py Fri Feb 19 21:24:41 2021 +0000 @@ -2,8 +2,9 @@ create a new parameter file using ' -c ./mqpar.xml' """ +import xml.etree.ElementTree as ET + import pytest -import xml.etree.ElementTree as ET from mqparam import MQParam, ParamGroup TEMPLATE_PATH = './test-data/template.xml'