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changeset 17:1f39c833f65f draft

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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/maxquant commit cda481171e25f6f18c090ae491e9fb68589ffae8
author galaxyp
date Mon, 25 Jul 2022 17:37:01 +0000
parents 74f5d355d156
children 163452d1e255
files macros.xml maxquant.xml maxquant_mqpar.xml
diffstat 3 files changed, 9 insertions(+), 0 deletions(-) [+]
line wrap: on
line diff
--- a/macros.xml	Fri Jul 22 07:10:28 2022 +0000
+++ b/macros.xml	Mon Jul 25 17:37:01 2022 +0000
@@ -96,6 +96,13 @@
             <requirement type="package" version="1.32">tar</requirement>
         </requirements>
     </xml>
+    <xml name="required_files">
+        <required_files>
+            <include path="create_mqpar.py" />
+            <include path="modify_mqpar.py" />
+            <include path="mqparam.py" />
+        </required_files>
+    </xml>
     <xml name="ptxqc">
         <configfile name="qr_yaml">
             PTXQC:
--- a/maxquant.xml	Fri Jul 22 07:10:28 2022 +0000
+++ b/maxquant.xml	Mon Jul 25 17:37:01 2022 +0000
@@ -13,6 +13,7 @@
         <import>macros.xml</import>
     </macros>
     <expand macro="requirements"/>
+    <expand macro="required_files"/>
     <command detect_errors="exit_code"><![CDATA[
     #import re
     maxquant -c mqpar.xml 2>/dev/null  ## MQ writes success of creation to stderr
--- a/maxquant_mqpar.xml	Fri Jul 22 07:10:28 2022 +0000
+++ b/maxquant_mqpar.xml	Mon Jul 25 17:37:01 2022 +0000
@@ -13,6 +13,7 @@
         <import>macros.xml</import>
     </macros>
     <expand macro="requirements"/>
+    <expand macro="required_files"/>
     <command detect_errors="exit_code"><![CDATA[
     ## link galaxy datasets to filenames accepted by maxquant
     #import re