Mercurial > repos > galaxyp > maxquant_mqpar

annotate test-data/txt/modificationSpecificPeptides.txt @ 4:9cb7dcc07dae draft default tip

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"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/maxquant commit 5e4f8567c0145de8c6f9344fe4ee4c3bf2a81e59"
author galaxyp
date Fri, 19 Feb 2021 21:25:06 +0000
parents 2d67fb758956
children
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2d67fb758956 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/maxquant commit da342a782ccc391b87fb4fead956b7b3cbd21258"
galaxyp
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1 Sequence Modifications Mass Mass Fractional Part Protein Groups Proteins Unique (Groups) Unique (Proteins) Acetyl (Protein N-term) Oxidation (M) Missed cleavages Retention time Calibrated retention time Charges PEP MS/MS scan number Raw file Score Delta score Reverse Potential contaminant Intensity id Protein group IDs Peptide ID Evidence IDs MS/MS IDs Best MS/MS Oxidation (M) site IDs MS/MS Count
2d67fb758956 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/maxquant commit da342a782ccc391b87fb4fead956b7b3cbd21258"
galaxyp
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2 AEFVEVTK Unmodified 921.48075 0.48074791 0 CON__P02769;bsa yes no 0 0 0 0.52947 0.52947 2 0.010981 85 BSA_min_21 3.3922 3.3922 + 43020 0 0 0 0 0 0 0
2d67fb758956 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/maxquant commit da342a782ccc391b87fb4fead956b7b3cbd21258"
galaxyp
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3 DDPHACYSTVFDK Unmodified 1553.6457 0.64565776 0 CON__P02769;bsa yes no 0 0 0 0.47149 0.47149 2 0.0081868 82 BSA_min_21 0 0 + 32419 1 0 1 1 1 1 1
2d67fb758956 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/maxquant commit da342a782ccc391b87fb4fead956b7b3cbd21258"
galaxyp
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4 ECCHGDLLECADDR Unmodified 1748.6553 0.65525294 0 CON__P02769;bsa yes no 0 0 0 0.46522 0.46522 2;3 0.011617 60 BSA_min_22 4.06 4.06 + 485350 2 0 2 2;3 2;3;4 2 3
2d67fb758956 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/maxquant commit da342a782ccc391b87fb4fead956b7b3cbd21258"
galaxyp
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5 FNETTEK Unmodified 867.39741 0.39741221 8 CON__REFSEQ:XP_585019 yes yes 0 0 0 0.54676 0.54676 1 0.0062991 57 BSA_min_21 0 0 + 40514 3 8 3 4 5 5 0
2d67fb758956 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/maxquant commit da342a782ccc391b87fb4fead956b7b3cbd21258"
galaxyp
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6 GCTTTNSPSTPCQNCSR Unmodified 1926.7618 0.76184328 7 CON__Q6IFU6 yes yes 0 0 0 0.26375 0.26375 2 0.016056 45 BSA_min_21 0 0 + 0 4 7 4 5 6 6 1
2d67fb758956 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/maxquant commit da342a782ccc391b87fb4fead956b7b3cbd21258"
galaxyp
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7 GETGPAGPSGAPGPAGSR Unmodified 1521.7172 0.71718322 4 CON__P04258 yes yes 0 0 0 0.091825 0.091825 3 0.014811 16 BSA_min_21 0 0 + 0 5 4 5 6 7 7 1
2d67fb758956 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/maxquant commit da342a782ccc391b87fb4fead956b7b3cbd21258"
galaxyp
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8 LGQYTSPVAK Unmodified 1062.571 0.5709599 1 CON__P01030;CON__ENSEMBL:ENSBTAP00000007350 yes no 0 0 0 0.057288 0.057288 2 0.0086806 10 BSA_min_21 9.2141 9.2141 + 0 6 1 6 7 8 8 1
2d67fb758956 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/maxquant commit da342a782ccc391b87fb4fead956b7b3cbd21258"
galaxyp
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9 TSDANINWNNLK Unmodified 1388.6684 0.66844211 6 CON__Q29443;CON__Q0IIK2 yes no 0 0 0 0.41393 0.41393 2;3 0.0052683 98 BSA_min_21 2.8669 2.8669 + 137580 7 6 7 8;9 9;10;11 10 3
2d67fb758956 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/maxquant commit da342a782ccc391b87fb4fead956b7b3cbd21258"
galaxyp
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10 VLDQYIFELSR Unmodified 1381.7242 0.72416608 2 CON__Q3MHN5;CON__ENSEMBL:ENSBTAP00000018229 yes no 0 0 0 0.50384 0.50384 2 0.01812 48 BSA_min_22 0 0 + 89423 8 2 8 10 12 12 0
2d67fb758956 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/maxquant commit da342a782ccc391b87fb4fead956b7b3cbd21258"
galaxyp
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11 VLYDAEISQIHQSVTDTNVILSMDNSR Unmodified 3047.487 0.48697886 5 CON__P35908v2;CON__P35908 yes no 0 0 0 0.35628 0.35628 6 0.0020659 73 BSA_min_21 0 0 + 26948 9 5 9 11 13 13 0
2d67fb758956 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/maxquant commit da342a782ccc391b87fb4fead956b7b3cbd21258"
galaxyp
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12 YCGVPGEYWLGNDR Unmodified 1684.7304 0.73039044 3 CON__P02676 yes yes 0 0 0 0.51128 0.51128 2;3 0.011617 80 BSA_min_21 0 0 + 114330 10 3 10 12;13 14;15 14 2
2d67fb758956 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/maxquant commit da342a782ccc391b87fb4fead956b7b3cbd21258"
galaxyp
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13 YICDNQDTISSK Unmodified 1442.6348 0.63475872 0 CON__P02769;bsa yes no 0 0 0 0.25827 0.25827 2 4.413E-09 44 BSA_min_21 24.343 7.7115 + 0 11 0 11 14 16 16 1