Mercurial > repos > galaxyp > maxquant_mqpar

comparison test-data/txt/proteinGroups.txt @ 3:2d67fb758956 draft

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"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/maxquant commit da342a782ccc391b87fb4fead956b7b3cbd21258"
author galaxyp
date Sat, 11 Apr 2020 11:50:09 -0400
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2:3fc2116ac6d9 3:2d67fb758956
1 Protein IDs Majority protein IDs Peptide counts (all) Peptide counts (razor+unique) Peptide counts (unique) Fasta headers Number of proteins Peptides Razor + unique peptides Unique peptides Sequence coverage [%] Unique + razor sequence coverage [%] Unique sequence coverage [%] Mol. weight [kDa] Sequence length Sequence lengths Q-value Score Intensity MS/MS count Only identified by site Reverse Potential contaminant id Peptide IDs Peptide is razor Mod. peptide IDs Evidence IDs MS/MS IDs Best MS/MS Oxidation (M) site IDs Oxidation (M) site positions
2 CON__P02769;bsa CON__P02769;bsa 4;4 4;4 4;4 ;bsa sp|P02769|ALBU_BOVIN Serum albumin OS=Bos taurus OX=9913 GN=ALB PE=1 SV=4 2 4 4 4 7.7 7.7 7.7 69.293 607 607;607 0 30.336 560790 5 + 0 0;1;2;11 True;True;True;True 0;1;2;11 0;1;2;3;14 0;1;2;3;4;16 0;1;2;16
3 CON__P01030;CON__ENSEMBL:ENSBTAP00000007350 CON__P01030;CON__ENSEMBL:ENSBTAP00000007350 1;1 1;1 1;1 ; 2 1 1 1 0.6 0.6 0.6 192.79 1741 1741;1742 0 6.0615 0 1 + 1 6 True 6 7 8 8
4 CON__Q3MHN5;CON__ENSEMBL:ENSBTAP00000018229 CON__Q3MHN5;CON__ENSEMBL:ENSBTAP00000018229 1;1 1;1 1;1 ; 2 1 1 1 2.3 2.3 2.3 53.341 474 474;475 0 5.7418 89423 0 + 2 8 True 8 10 12 12
5 CON__P02676 CON__P02676 1 1 1 1 1 1 1 2.8 2.8 2.8 56.44 495 495 0 5.9349 114330 2 + 3 10 True 10 12;13 14;15 14
6 CON__P04258 CON__P04258 1 1 1 1 1 1 1 1.2 1.2 1.2 138.44 1466 1466 0 5.8294 0 1 + 4 5 True 5 6 7 7
7 CON__P35908v2;CON__P35908 CON__P35908v2;CON__P35908 1;1 1;1 1;1 ; 2 1 1 1 4.2 4.2 4.2 65.432 639 639;645 0 6.6849 26948 0 + 5 9 True 9 11 13 13
8 CON__Q29443;CON__Q0IIK2 CON__Q29443;CON__Q0IIK2 1;1 1;1 1;1 ; 2 1 1 1 1.8 1.8 1.8 75.829 685 685;704 0 6.2783 137580 3 + 6 7 True 7 8;9 9;10;11 9
9 CON__Q6IFU6 CON__Q6IFU6 1 1 1 1 1 1 1 3.5 3.5 3.5 55.651 491 491 0 5.7944 0 1 + 7 4 True 4 5 6 6
10 CON__REFSEQ:XP_585019 CON__REFSEQ:XP_585019 1 1 1 1 1 1 1 1.2 1.2 1.2 69.561 604 604 0 6.2007 40514 0 + 8 3 True 3 4 5 5