Mercurial > repos > galaxyp > maxquant_mqpar
comparison init.py @ 2:3fc2116ac6d9 draft
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/maxquant commit 74b5aa29e49deaaebe19ce2355a70d4f570f4951"
| author | galaxyp |
|---|---|
| date | Thu, 15 Aug 2019 08:09:38 -0400 |
| parents | 256cc0e17454 |
| children |
comparison
equal
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| 1:26693e21c3c8 | 2:3fc2116ac6d9 |
|---|---|
| 43 | 43 |
| 44 mods = mods_root.findall('modification') | 44 mods = mods_root.findall('modification') |
| 45 standard_mods = [] | 45 standard_mods = [] |
| 46 label_mods = [] | 46 label_mods = [] |
| 47 for m in mods: | 47 for m in mods: |
| 48 if (m.findtext('type') == 'Standard' | 48 if (m.findtext('type') == 'Standard' or m.findtext('type') == 'AaSubstitution'): |
| 49 or m.findtext('type') == 'AaSubstitution'): | |
| 50 standard_mods.append(m.get('title')) | 49 standard_mods.append(m.get('title')) |
| 51 elif m.findtext('type') == 'Label': | 50 elif m.findtext('type') == 'Label': |
| 52 label_mods.append(m.get('title')) | 51 label_mods.append(m.get('title')) |
| 53 | 52 |
| 54 if args.enzymes: | 53 if args.enzymes: |