view test-data/tax_filt.tab @ 6:06f6826d380c draft default tip

planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/metaquantome commit ec66b5b0627e7cf15b6e67e90d82ba8e0743b761
author galaxyp
date Mon, 18 Mar 2024 12:34:10 +0000
parents ac3511167a71
children
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id	taxon_name	rank	NS_mean	WS_mean	X737NS	X737WS	X852NS	X852WS	X867NS	X867WS	X737NS_n_peptide	X737WS_n_peptide	X852NS_n_peptide	X852WS_n_peptide	X867NS_n_peptide	X867WS_n_peptide	X737NS_n_samp_children	X737WS_n_samp_children	X852NS_n_samp_children	X852WS_n_samp_children	X867NS_n_samp_children	X867WS_n_samp_children
712	Pasteurellaceae	family	26.45508515455985	24.240760984631766	24.965005542520593	22.218244926365948	0.0	17.341365183225566	27.1723016809798	25.697827115441516	12.0	12.0	0.0	1.0	12.0	12.0	1.0	1.0	0.0	0.0	1.0	1.0
724	Haemophilus	genus	26.043545589333238	24.308669239875652	23.49238493402781	21.57274687722112	0.0	0.0	26.91490217583963	25.19610989120677	5.0	5.0	0.0	0.0	5.0	5.0	1.0	1.0	0.0	0.0	1.0	1.0
729	Haemophilus parainfluenzae	species	23.516051135977808	21.837453207025035	22.113077280032016	20.132830444840515	0.0	0.0	24.21369255243491	22.597204359627263	4.0	4.0	0.0	0.0	4.0	4.0	0.0	0.0	0.0	0.0	0.0	0.0
1224	Proteobacteria	phylum	26.506407720117732	26.405669726384243	25.647561843048845	25.684049762573892	25.572526514273356	26.02079872568725	27.451384780869606	27.10853680624065	18.0	18.0	3.0	4.0	17.0	17.0	2.0	2.0	2.0	2.0	2.0	2.0
1239	Firmicutes	phylum	28.512385596646148	30.091433318476454	28.16821189186139	29.85860894014845	28.689295147943678	29.902989443795985	28.625794429436656	30.43794314029389	247.0	362.0	325.0	366.0	317.0	354.0	3.0	2.0	3.0	3.0	3.0	2.0
1301	Streptococcus	genus	26.867617254051414	28.85011386863358	26.46624241376839	28.05891048314316	26.560458646377878	29.13539355848514	27.388297546047863	29.117339967272912	67.0	124.0	96.0	127.0	111.0	124.0	2.0	3.0	3.0	3.0	2.0	3.0
1302	Streptococcus gordonii	species	24.686370636745576	27.653507330007766	23.762400434698712	26.151624056996113	24.539475551766014	27.515752990669643	25.336906564014722	28.450914623490767	24.0	43.0	29.0	44.0	44.0	45.0	0.0	0.0	0.0	0.0	0.0	0.0
28216	Betaproteobacteria	class	23.29428542923752	24.791799066973446	22.374889513201293	21.402137416070087	24.544202571791207	23.84100698984557	19.8675358581728	26.047141520330538	2.0	2.0	2.0	2.0	1.0	1.0	2.0	2.0	2.0	2.0	1.0	1.0
29465	Veillonella	genus	27.14677305830786	28.768830375331426	27.034861383116564	28.980840680293607	27.47904567128595	27.71387087737904	26.85278433596802	29.212848758443123	134.0	167.0	149.0	156.0	126.0	156.0	3.0	2.0	3.0	2.0	2.0	3.0
29466	Veillonella parvula	species	18.832221452467913	23.646622731934286	18.99584905472981	22.846993959159153	18.647632848343047	21.527044665274683	0.0	24.781099201499504	3.0	4.0	2.0	4.0	0.0	4.0	0.0	0.0	0.0	0.0	0.0	0.0
39778	Veillonella dispar	species	20.06805764601431	21.234364824902784	18.873358040924337	21.41636590750601	18.430484676034965	0.0	21.232667529959397	21.02604333055197	4.0	4.0	1.0	0.0	4.0	4.0	0.0	0.0	0.0	0.0	0.0	0.0
40674	Mammalia	class	18.71423436046836	17.946348342079197	17.822232855425355	17.738850060395933	18.41771660331577	18.769965187049696	19.43400368663769	16.48885357307721	1.0	1.0	2.0	2.0	2.0	1.0	0.0	0.0	1.0	1.0	1.0	1.0
46124	Granulicatella adiacens	species	25.44795951209062	24.095117178766355	22.413021529130273	23.066852858599482	26.121087214932714	23.994120320785946	25.808003124552783	24.75258507306872	12.0	25.0	31.0	31.0	33.0	29.0	0.0	0.0	0.0	0.0	0.0	0.0
186826	Lactobacillales	order	27.515198585571607	29.11785831796523	26.715706855135487	28.32187712752904	27.586822118206747	29.36333727974101	27.974157758353318	29.426524865028252	92.0	171.0	151.0	183.0	167.0	176.0	2.0	3.0	3.0	3.0	2.0	3.0