Mercurial > repos > galaxyp > mqppep_preproc

annotate test-data/test_input_for_anova.tabular @ 0:8dfd5d2b5903 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 3a7b3609d6e514c9e8f980ecb684960c6b2252fe
author galaxyp
date Mon, 11 Jul 2022 19:22:54 +0000
parents
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
8dfd5d2b5903 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 3a7b3609d6e514c9e8f980ecb684960c6b2252fe
galaxyp
parents:
diff changeset
1 Phosphopeptide Sequence10 Sequence7 Gene_Name Phosphoresidue UniProt_ID Description Function Phosphoresidue(PSP=PhosphoSitePlus.org) Putative Upstream Kinases(PSP=PhosphoSitePlus.org)/Phosphatases/Binding Domains Intensity.shL.1A Intensity.shL.1B Intensity.shL.1C Intensity.shR.2A Intensity.shR.2B Intensity.shR.2C
8dfd5d2b5903 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 3a7b3609d6e514c9e8f980ecb684960c6b2252fe
galaxyp
parents:
diff changeset
2 AAAAPDSRVpSEEENLK MAAAAPDSRVpSEEENLKKTPK AAPDSRVsEEENLKK RRP15 pS11 Q9Y3B9 RRP15_HUMAN RRP15-like protein OS=Homo sapiens OX=9606 GN=RRP15 PE=1 SV=2 N/A CK2alpha | BARD1 Q99728 38150000 39445000 56305000 55338000 7010600 70203000
8dfd5d2b5903 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 3a7b3609d6e514c9e8f980ecb684960c6b2252fe
galaxyp
parents:
diff changeset
3 AAAITDMADLEELSRLpSPLPPGpSPGSAAR MADLEELSRLpSPLPPGSPGSA; LSRLSPLPPGpSPGSAARGRAE LEELSRLsPLPPGSP | LSPLPPGsPGSAARG AEBP2; AEBP2 pS18, pS24; pS18, pS24 Q6ZN18; Q6ZN18-2 AEBP2_HUMAN Zinc finger protein AEBP2 OS=Homo sapiens OX=9606 GN=AEBP2 PE=1 SV=2; AEBP2_HUMAN Isoform 2 of Zinc finger protein AEBP2 OS=Homo sapiens OX=9606 GN=AEBP2 N/A N/A 5416400 7101800 385280000 208060000 41426000 352400000
8dfd5d2b5903 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 3a7b3609d6e514c9e8f980ecb684960c6b2252fe
galaxyp
parents:
diff changeset
4 ADALQAGASQFETpSAAK LQAGASQFETpSAAKLKRKYWW GASQFETsAAKLKRK VAMP2; VAMP3 pS80; pS63 P63027; Q15836 VAMP2_HUMAN_Vesicle-associated membrane protein 2 OS=Homo sapiens OX=9606 GN=VAMP2 PE=1 SV=3; VAMP3_HUMAN_Vesicle-associated membrane protein 3 OS=Homo sapiens OX=9606 GN=VAMP3 PE=1 SV=3 N/A PKD3 | PKCiota 44627000 41445000 69094000 42521000 5738000 61819000
8dfd5d2b5903 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 3a7b3609d6e514c9e8f980ecb684960c6b2252fe
galaxyp
parents:
diff changeset
5 DQKLpSELDDR DKVLERDQKLpSELDDRADALQ LERDQKLsELDDRAD VAMP1; VAMP1; VAMP1; VAMP2; VAMP3 pS63; pS63; pS63; pS61; pS44 P23763; P23763-2; P23763-3; P63027; Q15836 VAMP1_HUMAN_Vesicle-associated membrane protein 1 OS=Homo sapiens OX=9606 GN=VAMP1 PE=1 SV=1; VAMP1_HUMAN_Isoform 3 of Vesicle-associated membrane protein 1 OS=Homo sapiens OX=9606 GN=VAMP1; VAMP1_HUMAN_Isoform 2 of Vesicle-associated membrane protein 1 OS=Homo sapiens OX=9606 GN=VAMP1; VAMP2_HUMAN_Vesicle-associated membrane protein 2 OS=Homo sapiens OX=9606 GN=VAMP2 PE=1 SV=3; VAMP3_HUMAN_Vesicle-associated membrane protein 3 OS=Homo sapiens OX=9606 GN=VAMP3 PE=1 SV=3 N/A CK2alpha | PKAbeta | PKAgamma | PKCiota | PDHK1 75542000 44814000 32924000 35016000 11023000 4669900
8dfd5d2b5903 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 3a7b3609d6e514c9e8f980ecb684960c6b2252fe
galaxyp
parents:
diff changeset
6 EFVpSSDESSSGENK SESFKSKEFVpSSDESSSGENK FKSKEFVsSDESSSG SSRP1 pS667 Q08945 SSRP1_HUMAN FACT complex subunit SSRP1 OS=Homo sapiens OX=9606 GN=SSRP1 PE=1 SV=1 N/A CK2alpha | CK2a2 | CDK7 | GSK3 12562000 16302000 23000000 7857800 0 18830000
8dfd5d2b5903 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 3a7b3609d6e514c9e8f980ecb684960c6b2252fe
galaxyp
parents:
diff changeset
7 EGMNPSYDEYADpSDEDQHDAYLER MNPSYDEYADpSDEDQHDAYLE SYDEYADsDEDQHDA SSRP1 pS444 Q08945 SSRP1_HUMAN FACT complex subunit SSRP1 OS=Homo sapiens OX=9606 GN=SSRP1 PE=1 SV=1 N/A CK2alpha | CK2a2 | CDK7 | CK1alpha | GRK-2 | PDHK1 0 0 0 0 0 0
8dfd5d2b5903 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 3a7b3609d6e514c9e8f980ecb684960c6b2252fe
galaxyp
parents:
diff changeset
8 IGNEEpSDLEEACILPHpSPINVDK DDEEKIGNEEpSDLEEACILPH; DLEEACILPHpSPINVDKRPIA EKIGNEEsDLEEACI | EACILPHsPINVDKR HERC2 pS1577, pS1588 O95714 HERC2_HUMAN E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens OX=9606 GN=HERC2 PE=1 SV=2 N/A CK2alpha | GRK-2 | DOC_WW_Pin1_4 | NEK6 167764000 121218000 155736000 140640000 83642000 128468000
8dfd5d2b5903 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 3a7b3609d6e514c9e8f980ecb684960c6b2252fe
galaxyp
parents:
diff changeset
9 IRAEEEDLAAVPFLApSDNEEEEDEK EDLAAVPFLApSDNEEEEDEKG AAVPFLAsDNEEEED HERC2 pS2928 O95714 HERC2_HUMAN E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens OX=9606 GN=HERC2 PE=1 SV=2 N/A CK2alpha 22562000 18225000 9119700 11689000 0 0
8dfd5d2b5903 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 3a7b3609d6e514c9e8f980ecb684960c6b2252fe
galaxyp
parents:
diff changeset
10 KGLLApTpSGNDGTIR VWCNKKGLLApTSGNDGTIRVW; WCNKKGLLATpSGNDGTIRVWN NKKGLLAtSGNDGTI | KKGLLATsGNDGTIR HERC1 pT3445, pS3446 Q15751 HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens OX=9606 GN=HERC1 PE=1 SV=2 N/A N/A 7843600 0 241700000 0 0 10042600
8dfd5d2b5903 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 3a7b3609d6e514c9e8f980ecb684960c6b2252fe
galaxyp
parents:
diff changeset
11 KpSSLVTSK PTPQDLPQRKpSSLVTSKLAGG; PTPQDLPQRKpSSLVTSKLAG QDLPQRKsSLVTSKL ENSA; ENSA; ENSA; ENSA; ENSA; ENSA; ENSA; ENSA pS108; pS108; pS124; pS131; pS104; pS104; pS120; pS124 O43768; O43768-2; O43768-3; O43768-4; O43768-5; O43768-6; O43768-7; O43768-9 ENSA_HUMAN Alpha-endosulfine OS=Homo sapiens OX=9606 GN=ENSA PE=1 SV=1; ENSA_HUMAN Isoform 2 of Alpha-endosulfine OS=Homo sapiens OX=9606 GN=ENSA; ENSA_HUMAN Isoform 3 of Alpha-endosulfine OS=Homo sapiens OX=9606 GN=ENSA; ENSA_HUMAN Isoform 4 of Alpha-endosulfine OS=Homo sapiens OX=9606 GN=ENSA; ENSA_HUMAN Isoform 5 of Alpha-endosulfine OS=Homo sapiens OX=9606 GN=ENSA; ENSA_HUMAN Isoform 6 of Alpha-endosulfine OS=Homo sapiens OX=9606 GN=ENSA; ENSA_HUMAN Isoform 7 of Alpha-endosulfine OS=Homo sapiens OX=9606 GN=ENSA; ENSA_HUMAN Isoform 9 of Alpha-endosulfine OS=Homo sapiens OX=9606 GN=ENSA N/A N/A 0 0 18629000 0 0 0
8dfd5d2b5903 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 3a7b3609d6e514c9e8f980ecb684960c6b2252fe
galaxyp
parents:
diff changeset
12 KSpSLVTSK TPQDLPQRKSpSLVTSKLAGGQ; TPQDLPQRKSpSLVTSKLAG DLPQRKSsLVTSKLA ENSA; ENSA; ENSA; ENSA; ENSA; ENSA; ENSA; ENSA pS109; pS109; pS125; pS132; pS105; pS105; pS121; pS125 O43768; O43768-2; O43768-3; O43768-4; O43768-5; O43768-6; O43768-7; O43768-9 ENSA_HUMAN Alpha-endosulfine OS=Homo sapiens OX=9606 GN=ENSA PE=1 SV=1; ENSA_HUMAN Isoform 2 of Alpha-endosulfine OS=Homo sapiens OX=9606 GN=ENSA; ENSA_HUMAN Isoform 3 of Alpha-endosulfine OS=Homo sapiens OX=9606 GN=ENSA; ENSA_HUMAN Isoform 4 of Alpha-endosulfine OS=Homo sapiens OX=9606 GN=ENSA; ENSA_HUMAN Isoform 5 of Alpha-endosulfine OS=Homo sapiens OX=9606 GN=ENSA; ENSA_HUMAN Isoform 6 of Alpha-endosulfine OS=Homo sapiens OX=9606 GN=ENSA; ENSA_HUMAN Isoform 7 of Alpha-endosulfine OS=Homo sapiens OX=9606 GN=ENSA; ENSA_HUMAN Isoform 9 of Alpha-endosulfine OS=Homo sapiens OX=9606 GN=ENSA molecular association, regulation; protein conformation; SNCA(DISRUPTS) MDC1 FHA | GSK3 | PLK1 PBD 7090300 8341200 9691500 10030000 1675200 9952100
8dfd5d2b5903 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 3a7b3609d6e514c9e8f980ecb684960c6b2252fe
galaxyp
parents:
diff changeset
13 LpSPNPWQEK MLAVDIEDRLpSPNPWQEKREI VDIEDRLsPNPWQEK HERC2 pS3462 O95714 HERC2_HUMAN E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens OX=9606 GN=HERC2 PE=1 SV=2 N/A DOC_WW_Pin1_4 0 11706000 12495000 0 7273000 8877800
8dfd5d2b5903 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 3a7b3609d6e514c9e8f980ecb684960c6b2252fe
galaxyp
parents:
diff changeset
14 NLLEDDpSDEEEDFFLR SERRNLLEDDpSDEEEDFFLRG RNLLEDDsDEEEDFF VAMP4 pS30 O75379 VAMP4_HUMAN_Vesicle-associated membrane protein 4 OS=Homo sapiens OX=9606 GN=VAMP4 PE=1 SV=2 N/A CK2alpha | GRK-2 | BARD1 Q99728 | Csnk2a1 1592100000 973800000 1011600000 1450300000 631970000 878760000
8dfd5d2b5903 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 3a7b3609d6e514c9e8f980ecb684960c6b2252fe
galaxyp
parents:
diff changeset
15 pSQKQEEENPAEETGEEK MpSQKQEEENPAE ______MsQKQEEEN ENSA; ENSA; ENSA; ENSA; ENSA; ENSA pS2; pS2; pS2; pS2; pS2; pS2 O43768; O43768-2; O43768-3; O43768-4; O43768-8; O43768-9 ENSA_HUMAN Alpha-endosulfine OS=Homo sapiens OX=9606 GN=ENSA PE=1 SV=1; ENSA_HUMAN Isoform 2 of Alpha-endosulfine OS=Homo sapiens OX=9606 GN=ENSA; ENSA_HUMAN Isoform 3 of Alpha-endosulfine OS=Homo sapiens OX=9606 GN=ENSA; ENSA_HUMAN Isoform 4 of Alpha-endosulfine OS=Homo sapiens OX=9606 GN=ENSA; ENSA_HUMAN Isoform 8 of Alpha-endosulfine OS=Homo sapiens OX=9606 GN=ENSA; ENSA_HUMAN Isoform 9 of Alpha-endosulfine OS=Homo sapiens OX=9606 GN=ENSA N/A N/A 0 0 8765300 0 2355900 14706000
8dfd5d2b5903 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 3a7b3609d6e514c9e8f980ecb684960c6b2252fe
galaxyp
parents:
diff changeset
16 pTYVDPFTpYEDPNQAVR EEKHLNQGVRpTYVDPFTYEDP; GVRTYVDPFTpYEDPNQAVREF HLNQGVRtYVDPFTY | TYVDPFTyEDPNQAV EPHA4; EPHA4 pT595, pY602; pT544, pY551 P54764; P54764-2 EPHA4_HUMAN Ephrin type-A receptor 4 OS=Homo sapiens OX=9606 GN=EPHA4 PE=1 SV=1; EPHA4_HUMAN Isoform 2 of Ephrin type-A receptor 4 OS=Homo sapiens OX=9606 GN=EPHA4 N/A EPHA4 | EphA1 | EphA2 | EphA3 | EphA5 | EphA7 | EphA6 | Abl | EphA8 | Fgr | Yes | BLK | HCK | EphB6 | EphB3 725460 0 1651300 655850 646420 0
8dfd5d2b5903 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 3a7b3609d6e514c9e8f980ecb684960c6b2252fe
galaxyp
parents:
diff changeset
17 QLSEpSFK SKSSSRQLSEpSFKSKEFVSSD SSRQLSEsFKSKEFV SSRP1 pS659 Q08945 SSRP1_HUMAN FACT complex subunit SSRP1 OS=Homo sapiens OX=9606 GN=SSRP1 PE=1 SV=1 N/A CK2a2 | CDK7 | PKCalpha | PKCbeta | DNAPK | NEK6 68201000 87774000 138300000 95357000 19966000 149110000
8dfd5d2b5903 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 3a7b3609d6e514c9e8f980ecb684960c6b2252fe
galaxyp
parents:
diff changeset
18 RGpSLEMSSDGEPLSR SSATSGGRRGpSLEMSSDGEPL TSGGRRGsLEMSSDG AEBP2; AEBP2 pS206; pS206 Q6ZN18; Q6ZN18-2 AEBP2_HUMAN Zinc finger protein AEBP2 OS=Homo sapiens OX=9606 GN=AEBP2 PE=1 SV=2; AEBP2_HUMAN Isoform 2 of Zinc finger protein AEBP2 OS=Homo sapiens OX=9606 GN=AEBP2 N/A GSK3 19262000 11103000 19454000 0 1816900 22028000
8dfd5d2b5903 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 3a7b3609d6e514c9e8f980ecb684960c6b2252fe
galaxyp
parents:
diff changeset
19 SDGpSLEDGDDVHR IEDGGARSDGpSLEDGDDVHRA GGARSDGsLEDGDDV SERINC1 pS364 Q9NRX5 SERC1_HUMAN Serine incorporator 1 OS=Homo sapiens OX=9606 GN=SERINC1 PE=1 SV=1 N/A PLK1 | PDHK1 31407000 17665000 20892000 23194000 5132400 54893000
8dfd5d2b5903 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 3a7b3609d6e514c9e8f980ecb684960c6b2252fe
galaxyp
parents:
diff changeset
20 SEpSLTAESR EGGGLMTRSEpSLTAESRLVHT GLMTRSEsLTAESRL HERC1 pS1491 Q15751 HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens OX=9606 GN=HERC1 PE=1 SV=2 N/A GRK-2 11766000 13176000 20540000 16963000 4364700 21308000
8dfd5d2b5903 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 3a7b3609d6e514c9e8f980ecb684960c6b2252fe
galaxyp
parents:
diff changeset
21 STGPTAATGpSNRR MSTGPTAATGpSNRRLQQTQNQ GPTAATGsNRRLQQT VAMP3 pS11 Q15836 VAMP3_HUMAN_Vesicle-associated membrane protein 3 OS=Homo sapiens OX=9606 GN=VAMP3 PE=1 SV=3 N/A PKCalpha | PKCbeta | PKCzeta 3057100 4718800 12052000 5047700 1070900 8333500
8dfd5d2b5903 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 3a7b3609d6e514c9e8f980ecb684960c6b2252fe
galaxyp
parents:
diff changeset
22 TEDLEATpSEHFK RNKTEDLEATpSEHFKTTSQKV TEDLEATsEHFKTTS VAMP8 pS55 Q9BV40 VAMP8_HUMAN_Vesicle-associated membrane protein 8 OS=Homo sapiens OX=9606 GN=VAMP8 PE=1 SV=1 activity, inhibited; abolish function in SNARE complex during mast cell secretion, reduces in vitro ensemble vesicle fusion N/A 20400000 9738500 7862300 0 0 76518000
8dfd5d2b5903 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 3a7b3609d6e514c9e8f980ecb684960c6b2252fe
galaxyp
parents:
diff changeset
23 TFWpSPELK SSMNSIKTFWpSPELKKERVLR NSIKTFWsPELKKER ERC2 pS187 O15083 ERC2_HUMAN ERC protein 2 OS=Homo sapiens OX=9606 GN=ERC2 PE=1 SV=3 N/A IKKalpha | IKKbeta | HIPK2 | DOC_WW_Pin1_4 29764000 20957000 24855000 30752000 8304800 23771000
8dfd5d2b5903 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/mqppep commit 3a7b3609d6e514c9e8f980ecb684960c6b2252fe
galaxyp
parents:
diff changeset
24 YFDpSGDYNMAK CADEMQKYFDpSGDYNMAKAKM; RLQKGQKYFDpSGDYNMAKAKM; MKSVEQKYFDpSGDYNMAKAKM EMQKYFDsGDYNMAK | KGQKYFDsGDYNMAK | VEQKYFDsGDYNMAK ENSA; ENSA; ENSA; ENSA; ENSA; ENSA; ENSA; ENSA pS67; pS67; pS83; pS90; pS63; pS63; pS79; pS83 O43768; O43768-2; O43768-3; O43768-4; O43768-5; O43768-6; O43768-7; O43768-9 ENSA_HUMAN Alpha-endosulfine OS=Homo sapiens OX=9606 GN=ENSA PE=1 SV=1; ENSA_HUMAN Isoform 2 of Alpha-endosulfine OS=Homo sapiens OX=9606 GN=ENSA; ENSA_HUMAN Isoform 3 of Alpha-endosulfine OS=Homo sapiens OX=9606 GN=ENSA; ENSA_HUMAN Isoform 4 of Alpha-endosulfine OS=Homo sapiens OX=9606 GN=ENSA; ENSA_HUMAN Isoform 5 of Alpha-endosulfine OS=Homo sapiens OX=9606 GN=ENSA; ENSA_HUMAN Isoform 6 of Alpha-endosulfine OS=Homo sapiens OX=9606 GN=ENSA; ENSA_HUMAN Isoform 7 of Alpha-endosulfine OS=Homo sapiens OX=9606 GN=ENSA; ENSA_HUMAN Isoform 9 of Alpha-endosulfine OS=Homo sapiens OX=9606 GN=ENSA molecular association, regulation; cell cycle regulation; PPP2CA(INDUCES) GRK-2 323250000 127970000 0 67123000 12790000 71378000