msgfplus: test-data/201208-378803-msgf_20161026-50ppm-semitryptic-no

annotate test-data/201208-378803-msgf_20161026-50ppm-semitryptic-no_mods.mzid @ 4:58f9cf0de6d4 draft

planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b2712071afd2d74261bc3e3fc555355f5675a0d6

author	galaxyp
date	Wed, 23 Aug 2017 05:47:29 -0400
parents	058a2ab1d462
children

rev	line source
2 058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1 <?xml version="1.0" encoding="UTF-8"?>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2 <MzIdentML xmlns="http://psidev.info/psi/pi/mzIdentML/1.1" id="MS-GF+" version="1.1.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://psidev.info/psi/pi/mzIdentML/1.1 http://www.psidev.info/files/mzIdentML1.1.0.xsd" creationDate="2016-11-10T20:16:49">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	3 <cvList xmlns="http://psidev.info/psi/pi/mzIdentML/1.1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	4 <cv fullName="PSI-MS" version="3.30.0" uri="https://raw.githubusercontent.com/HUPO-PSI/psi-ms-CV/master/psi-ms.obo" id="PSI-MS"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	5 <cv fullName="UNIMOD" uri="http://www.unimod.org/obo/unimod.obo" id="UNIMOD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	6 <cv fullName="UNIT-ONTOLOGY" uri="https://raw.githubusercontent.com/bio-ontology-research-group/unit-ontology/master/unit.obo" id="UO"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	7 </cvList>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	8 <AnalysisSoftwareList xmlns="http://psidev.info/psi/pi/mzIdentML/1.1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	9 <AnalysisSoftware version="Release (v2016.10.26)" id="ID_software" name="MS-GF+">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	10 <SoftwareName>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	11 <cvParam cvRef="PSI-MS" accession="MS:1002048" name="MS-GF+"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	12 </SoftwareName>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	13 </AnalysisSoftware>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	14 </AnalysisSoftwareList>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	15 <SequenceCollection xmlns="http://psidev.info/psi/pi/mzIdentML/1.1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	16 <DBSequence length="815" searchDatabase_ref="SearchDB_1" accession="XXX_gi\|528968104\|ref\|XP_005212567.1\|" id="DBSeq83632"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	17 <DBSequence length="811" searchDatabase_ref="SearchDB_1" accession="XXX_gi\|528968106\|ref\|XP_005212568.1\|" id="DBSeq84448"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	18 <DBSequence length="766" searchDatabase_ref="SearchDB_1" accession="XXX_gi\|528968108\|ref\|XP_005212569.1\|" id="DBSeq85260"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	19 <DBSequence length="626" searchDatabase_ref="SearchDB_1" accession="XXX_gi\|115497338\|ref\|NP_001069884.1\|" id="DBSeq93486"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	20 <DBSequence length="768" searchDatabase_ref="SearchDB_1" accession="gi\|528993971\|ref\|XP_005219929.1\|" id="DBSeq31093">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	21 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi\|528993971\|ref\|XP_005219929.1\| PREDICTED: lactoperoxidase isoform X1 [Bos taurus]"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	22 </DBSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	23 <DBSequence length="712" searchDatabase_ref="SearchDB_1" accession="gi\|528993973\|ref\|XP_005219930.1\|" id="DBSeq31862">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	24 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi\|528993973\|ref\|XP_005219930.1\| PREDICTED: lactoperoxidase isoform X2 [Bos taurus]"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	25 </DBSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	26 <DBSequence length="685" searchDatabase_ref="SearchDB_1" accession="gi\|528993975\|ref\|XP_005219931.1\|" id="DBSeq32575">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	27 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi\|528993975\|ref\|XP_005219931.1\| PREDICTED: lactoperoxidase isoform X3 [Bos taurus]"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	28 </DBSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	29 <DBSequence length="712" searchDatabase_ref="SearchDB_1" accession="gi\|27806851\|ref\|NP_776358.1\|" id="DBSeq47665">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	30 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi\|27806851\|ref\|NP_776358.1\| lactoperoxidase precursor [Bos taurus]"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	31 </DBSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	32 <DBSequence length="260" searchDatabase_ref="SearchDB_1" accession="gi\|30466252\|ref\|NP_848667.1\|" id="DBSeq46845">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	33 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi\|30466252\|ref\|NP_848667.1\| carbonic anhydrase 2 [Bos taurus]"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	34 </DBSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	35 <DBSequence length="1099" searchDatabase_ref="SearchDB_1" accession="XXX_gi\|358414198\|ref\|XP_002700672.2\|" id="DBSeq104353"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	36 <DBSequence length="1131" searchDatabase_ref="SearchDB_1" accession="XXX_gi\|528966552\|ref\|XP_005211956.1\|" id="DBSeq107227"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	37 <DBSequence length="1099" searchDatabase_ref="SearchDB_1" accession="XXX_gi\|528966554\|ref\|XP_005211957.1\|" id="DBSeq108359"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	38 <DBSequence length="1099" searchDatabase_ref="SearchDB_1" accession="XXX_gi\|297479727\|ref\|XP_002690982.1\|" id="DBSeq109459"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	39 <DBSequence length="558" searchDatabase_ref="SearchDB_1" accession="gi\|32880221\|ref\|NP_872593.1\|" id="DBSeq47106">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	40 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi\|32880221\|ref\|NP_872593.1\| glutamate dehydrogenase 1, mitochondrial precursor [Bos taurus]"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	41 </DBSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	42 <DBSequence length="607" searchDatabase_ref="SearchDB_1" accession="gi\|30794280\|ref\|NP_851335.1\|" id="DBSeq43937">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	43 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi\|30794280\|ref\|NP_851335.1\| serum albumin precursor [Bos taurus]"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	44 </DBSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	45 <DBSequence length="7610" searchDatabase_ref="SearchDB_1" accession="XXX_gi\|528944676\|ref\|XP_005204734.1\|" id="DBSeq65480"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	46 <DBSequence length="5498" searchDatabase_ref="SearchDB_1" accession="XXX_gi\|528944678\|ref\|XP_005204735.1\|" id="DBSeq73091"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	47 <DBSequence length="5422" searchDatabase_ref="SearchDB_1" accession="XXX_gi\|219804516\|ref\|NP_001137332.1\|" id="DBSeq94489"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	48 <DBSequence length="607" searchDatabase_ref="SearchDB_1" accession="XXX_gi\|30794280\|ref\|NP_851335.1\|" id="DBSeq99912"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	49 <DBSequence length="1252" searchDatabase_ref="SearchDB_1" accession="XXX_gi\|528921178\|ref\|XP_592304.7\|" id="DBSeq60575"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	50 <DBSequence length="1197" searchDatabase_ref="SearchDB_1" accession="XXX_gi\|528921180\|ref\|XP_005195747.1\|" id="DBSeq61828"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	51 <DBSequence length="1299" searchDatabase_ref="SearchDB_1" accession="XXX_gi\|528995523\|ref\|XP_002695913.2\|" id="DBSeq89848"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	52 <DBSequence length="7610" searchDatabase_ref="SearchDB_1" accession="gi\|528944676\|ref\|XP_005204734.1\|" id="DBSeq9505">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	53 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi\|528944676\|ref\|XP_005204734.1\| PREDICTED: microtubule-actin cross-linking factor 1 isoform X1 [Bos taurus]"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	54 </DBSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	55 <DBSequence length="5498" searchDatabase_ref="SearchDB_1" accession="gi\|528944678\|ref\|XP_005204735.1\|" id="DBSeq17116">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	56 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi\|528944678\|ref\|XP_005204735.1\| PREDICTED: microtubule-actin cross-linking factor 1 isoform X2 [Bos taurus]"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	57 </DBSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	58 <DBSequence length="5422" searchDatabase_ref="SearchDB_1" accession="gi\|219804516\|ref\|NP_001137332.1\|" id="DBSeq38514">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	59 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi\|219804516\|ref\|NP_001137332.1\| microtubule-actin cross-linking factor 1 [Bos taurus]"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	60 </DBSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	61 <DBSequence length="627" searchDatabase_ref="SearchDB_1" accession="XXX_gi\|139948503\|ref\|NP_001077142.1\|" id="DBSeq92858"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	62 <DBSequence length="854" searchDatabase_ref="SearchDB_1" accession="XXX_gi\|358418103\|ref\|XP_600387.4\|" id="DBSeq63026"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	63 <DBSequence length="854" searchDatabase_ref="SearchDB_1" accession="XXX_gi\|528923273\|ref\|XP_005196452.1\|" id="DBSeq63881"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	64 <DBSequence length="854" searchDatabase_ref="SearchDB_1" accession="XXX_gi\|297488451\|ref\|XP_002696970.1\|" id="DBSeq91148"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	65 <DBSequence length="854" searchDatabase_ref="SearchDB_1" accession="XXX_gi\|529000951\|ref\|XP_005222651.1\|" id="DBSeq92003"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	66 <DBSequence length="588" searchDatabase_ref="SearchDB_1" accession="gi\|528928354\|ref\|XP_005193233.1\|" id="DBSeq8761">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	67 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi\|528928354\|ref\|XP_005193233.1\| PREDICTED: fibrous sheath-interacting protein 2-like [Bos taurus]"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	68 </DBSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	69 <DBSequence length="558" searchDatabase_ref="SearchDB_1" accession="XXX_gi\|32880221\|ref\|NP_872593.1\|" id="DBSeq103081"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	70 <DBSequence length="1252" searchDatabase_ref="SearchDB_1" accession="gi\|528921178\|ref\|XP_592304.7\|" id="DBSeq4600">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	71 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi\|528921178\|ref\|XP_592304.7\| PREDICTED: protein flightless-1 homolog isoformX1 [Bos taurus]"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	72 </DBSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	73 <DBSequence length="1197" searchDatabase_ref="SearchDB_1" accession="gi\|528921180\|ref\|XP_005195747.1\|" id="DBSeq5853">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	74 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi\|528921180\|ref\|XP_005195747.1\| PREDICTED: protein flightless-1 homolog isoform X2 [Bos taurus]"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	75 </DBSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	76 <DBSequence length="1299" searchDatabase_ref="SearchDB_1" accession="gi\|528995523\|ref\|XP_002695913.2\|" id="DBSeq33873">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	77 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi\|528995523\|ref\|XP_002695913.2\| PREDICTED: protein flightless-1 homolog [Bos taurus]"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	78 </DBSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	79 <DBSequence length="811" searchDatabase_ref="SearchDB_1" accession="gi\|528968106\|ref\|XP_005212568.1\|" id="DBSeq28473">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	80 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi\|528968106\|ref\|XP_005212568.1\| PREDICTED: exocyst complex component 6B isoform X2 [Bos taurus]"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	81 </DBSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	82 <DBSequence length="815" searchDatabase_ref="SearchDB_1" accession="gi\|528968104\|ref\|XP_005212567.1\|" id="DBSeq27657">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	83 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi\|528968104\|ref\|XP_005212567.1\| PREDICTED: exocyst complex component 6B isoform X1 [Bos taurus]"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	84 </DBSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	85 <DBSequence length="766" searchDatabase_ref="SearchDB_1" accession="gi\|528968108\|ref\|XP_005212569.1\|" id="DBSeq29285">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	86 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi\|528968108\|ref\|XP_005212569.1\| PREDICTED: exocyst complex component 6B isoform X3 [Bos taurus]"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	87 </DBSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	88 <DBSequence length="626" searchDatabase_ref="SearchDB_1" accession="gi\|115497338\|ref\|NP_001069884.1\|" id="DBSeq37511">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	89 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi\|115497338\|ref\|NP_001069884.1\| exocyst complex component 6B [Bos taurus]"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	90 </DBSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	91 <DBSequence length="616" searchDatabase_ref="SearchDB_1" accession="gi\|528908802\|ref\|XP_005199340.1\|" id="DBSeq248">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	92 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi\|528908802\|ref\|XP_005199340.1\| PREDICTED: zinc finger protein 169 isoform X1 [Bos taurus]"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	93 </DBSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	94 <DBSequence length="616" searchDatabase_ref="SearchDB_1" accession="gi\|528908804\|ref\|XP_005199341.1\|" id="DBSeq865">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	95 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi\|528908804\|ref\|XP_005199341.1\| PREDICTED: zinc finger protein 169 isoform X2 [Bos taurus]"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	96 </DBSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	97 <DBSequence length="616" searchDatabase_ref="SearchDB_1" accession="gi\|528908806\|ref\|XP_005199342.1\|" id="DBSeq1482">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	98 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi\|528908806\|ref\|XP_005199342.1\| PREDICTED: zinc finger protein 169 isoform X3 [Bos taurus]"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	99 </DBSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	100 <DBSequence length="615" searchDatabase_ref="SearchDB_1" accession="gi\|528908808\|ref\|XP_005199343.1\|" id="DBSeq2099">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	101 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi\|528908808\|ref\|XP_005199343.1\| PREDICTED: zinc finger protein 169 isoform X4 [Bos taurus]"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	102 </DBSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	103 <DBSequence length="596" searchDatabase_ref="SearchDB_1" accession="gi\|528908810\|ref\|XP_005199344.1\|" id="DBSeq2715">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	104 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi\|528908810\|ref\|XP_005199344.1\| PREDICTED: zinc finger protein 169 isoform X5 [Bos taurus]"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	105 </DBSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	106 <DBSequence length="588" searchDatabase_ref="SearchDB_1" accession="gi\|528908812\|ref\|XP_609847.5\|" id="DBSeq3312">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	107 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi\|528908812\|ref\|XP_609847.5\| PREDICTED: zinc finger protein 169 isoform X6 [Bos taurus]"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	108 </DBSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	109 <DBSequence length="616" searchDatabase_ref="SearchDB_1" accession="gi\|528959647\|ref\|XP_005210511.1\|" id="DBSeq24004">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	110 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi\|528959647\|ref\|XP_005210511.1\| PREDICTED: zinc finger protein 169 isoform X2 [Bos taurus]"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	111 </DBSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	112 <DBSequence length="616" searchDatabase_ref="SearchDB_1" accession="gi\|528959649\|ref\|XP_005210512.1\|" id="DBSeq24621">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	113 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi\|528959649\|ref\|XP_005210512.1\| PREDICTED: zinc finger protein 169 isoform X3 [Bos taurus]"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	114 </DBSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	115 <DBSequence length="616" searchDatabase_ref="SearchDB_1" accession="gi\|528959651\|ref\|XP_005210513.1\|" id="DBSeq25238">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	116 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi\|528959651\|ref\|XP_005210513.1\| PREDICTED: zinc finger protein 169 isoform X4 [Bos taurus]"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	117 </DBSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	118 <DBSequence length="615" searchDatabase_ref="SearchDB_1" accession="gi\|528959653\|ref\|XP_005210514.1\|" id="DBSeq25855">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	119 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi\|528959653\|ref\|XP_005210514.1\| PREDICTED: zinc finger protein 169 isoform X5 [Bos taurus]"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	120 </DBSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	121 <DBSequence length="596" searchDatabase_ref="SearchDB_1" accession="gi\|528959655\|ref\|XP_005210515.1\|" id="DBSeq26471">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	122 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi\|528959655\|ref\|XP_005210515.1\| PREDICTED: zinc finger protein 169 isoform X6 [Bos taurus]"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	123 </DBSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	124 <DBSequence length="588" searchDatabase_ref="SearchDB_1" accession="gi\|528959657\|ref\|XP_002689899.2\|" id="DBSeq27068">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	125 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi\|528959657\|ref\|XP_002689899.2\| PREDICTED: zinc finger protein 169 isoform X1 [Bos taurus]"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	126 </DBSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	127 <DBSequence length="588" searchDatabase_ref="SearchDB_1" accession="XXX_gi\|528928354\|ref\|XP_005193233.1\|" id="DBSeq64736"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	128 <DBSequence length="719" searchDatabase_ref="SearchDB_1" accession="XXX_gi\|528961840\|ref\|XP_005211303.1\|" id="DBSeq105830"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	129 <DBSequence length="676" searchDatabase_ref="SearchDB_1" accession="XXX_gi\|528961845\|ref\|XP_005211304.1\|" id="DBSeq106550"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	130 <DBSequence length="676" searchDatabase_ref="SearchDB_1" accession="XXX_gi\|156523214\|ref\|NP_001096021.1\|" id="DBSeq110897"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	131 <DBSequence length="1099" searchDatabase_ref="SearchDB_1" accession="gi\|358414198\|ref\|XP_002700672.2\|" id="DBSeq48378">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	132 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi\|358414198\|ref\|XP_002700672.2\| PREDICTED: LOW QUALITY PROTEIN: solute carrier family 12 member 1 [Bos taurus]"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	133 </DBSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	134 <DBSequence length="1131" searchDatabase_ref="SearchDB_1" accession="gi\|528966552\|ref\|XP_005211956.1\|" id="DBSeq51252">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	135 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi\|528966552\|ref\|XP_005211956.1\| PREDICTED: solute carrier family 12 member 1 isoform X2 [Bos taurus]"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	136 </DBSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	137 <DBSequence length="1099" searchDatabase_ref="SearchDB_1" accession="gi\|528966554\|ref\|XP_005211957.1\|" id="DBSeq52384">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	138 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi\|528966554\|ref\|XP_005211957.1\| PREDICTED: solute carrier family 12 member 1 isoform X3 [Bos taurus]"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	139 </DBSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	140 <DBSequence length="1099" searchDatabase_ref="SearchDB_1" accession="gi\|297479727\|ref\|XP_002690982.1\|" id="DBSeq53484">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	141 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi\|297479727\|ref\|XP_002690982.1\| PREDICTED: solute carrier family 12 member 1 isoform X1 [Bos taurus]"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	142 </DBSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	143 <DBSequence length="616" searchDatabase_ref="SearchDB_1" accession="XXX_gi\|528908802\|ref\|XP_005199340.1\|" id="DBSeq56223"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	144 <DBSequence length="616" searchDatabase_ref="SearchDB_1" accession="XXX_gi\|528908804\|ref\|XP_005199341.1\|" id="DBSeq56840"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	145 <DBSequence length="616" searchDatabase_ref="SearchDB_1" accession="XXX_gi\|528908806\|ref\|XP_005199342.1\|" id="DBSeq57457"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	146 <DBSequence length="615" searchDatabase_ref="SearchDB_1" accession="XXX_gi\|528908808\|ref\|XP_005199343.1\|" id="DBSeq58074"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	147 <DBSequence length="596" searchDatabase_ref="SearchDB_1" accession="XXX_gi\|528908810\|ref\|XP_005199344.1\|" id="DBSeq58690"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	148 <DBSequence length="588" searchDatabase_ref="SearchDB_1" accession="XXX_gi\|528908812\|ref\|XP_609847.5\|" id="DBSeq59287"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	149 <DBSequence length="616" searchDatabase_ref="SearchDB_1" accession="XXX_gi\|528959647\|ref\|XP_005210511.1\|" id="DBSeq79979"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	150 <DBSequence length="616" searchDatabase_ref="SearchDB_1" accession="XXX_gi\|528959649\|ref\|XP_005210512.1\|" id="DBSeq80596"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	151 <DBSequence length="616" searchDatabase_ref="SearchDB_1" accession="XXX_gi\|528959651\|ref\|XP_005210513.1\|" id="DBSeq81213"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	152 <DBSequence length="615" searchDatabase_ref="SearchDB_1" accession="XXX_gi\|528959653\|ref\|XP_005210514.1\|" id="DBSeq81830"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	153 <DBSequence length="596" searchDatabase_ref="SearchDB_1" accession="XXX_gi\|528959655\|ref\|XP_005210515.1\|" id="DBSeq82446"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	154 <DBSequence length="588" searchDatabase_ref="SearchDB_1" accession="XXX_gi\|528959657\|ref\|XP_002689899.2\|" id="DBSeq83043"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	155 <DBSequence length="128" searchDatabase_ref="SearchDB_1" accession="gi\|528954392\|ref\|XP_005208526.1\|" id="DBSeq23875">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	156 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi\|528954392\|ref\|XP_005208526.1\| PREDICTED: ubiquitin-60S ribosomal protein L40 isoform X1 [Bos taurus]"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	157 </DBSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	158 <DBSequence length="128" searchDatabase_ref="SearchDB_1" accession="gi\|115496708\|ref\|NP_001069831.1\|" id="DBSeq46340">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	159 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi\|115496708\|ref\|NP_001069831.1\| ubiquitin-60S ribosomal protein L40 [Bos taurus]"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	160 </DBSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	161 <DBSequence length="128" searchDatabase_ref="SearchDB_1" accession="XXX_gi\|528954392\|ref\|XP_005208526.1\|" id="DBSeq79850"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	162 <DBSequence length="128" searchDatabase_ref="SearchDB_1" accession="XXX_gi\|115496708\|ref\|NP_001069831.1\|" id="DBSeq102315"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	163 <DBSequence length="375" searchDatabase_ref="SearchDB_1" accession="XXX_gi\|28849955\|ref\|NP_788795.1\|" id="DBSeq94113"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	164 <DBSequence length="376" searchDatabase_ref="SearchDB_1" accession="XXX_gi\|119924469\|ref\|XP_001252524.1\|" id="DBSeq105453"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	165 <DBSequence length="156" searchDatabase_ref="SearchDB_1" accession="gi\|528968221\|ref\|XP_005212615.1\|" id="DBSeq30052">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	166 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi\|528968221\|ref\|XP_005212615.1\| PREDICTED: ubiquitin-40S ribosomal protein S27a isoform X1 [Bos taurus]"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	167 </DBSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	168 <DBSequence length="156" searchDatabase_ref="SearchDB_1" accession="gi\|27807503\|ref\|NP_777203.1\|" id="DBSeq44851">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	169 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi\|27807503\|ref\|NP_777203.1\| ubiquitin-40S ribosomal protein S27a [Bos taurus]"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	170 </DBSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	171 <DBSequence length="854" searchDatabase_ref="SearchDB_1" accession="gi\|358418103\|ref\|XP_600387.4\|" id="DBSeq7051">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	172 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi\|358418103\|ref\|XP_600387.4\| PREDICTED: rab effector MyRIP isoform X2 [Bos taurus]"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	173 </DBSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	174 <DBSequence length="854" searchDatabase_ref="SearchDB_1" accession="gi\|528923273\|ref\|XP_005196452.1\|" id="DBSeq7906">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	175 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi\|528923273\|ref\|XP_005196452.1\| PREDICTED: rab effector MyRIP isoform X1 [Bos taurus]"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	176 </DBSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	177 <DBSequence length="854" searchDatabase_ref="SearchDB_1" accession="gi\|297488451\|ref\|XP_002696970.1\|" id="DBSeq35173">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	178 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi\|297488451\|ref\|XP_002696970.1\| PREDICTED: rab effector MyRIP isoform X1 [Bos taurus]"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	179 </DBSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	180 <DBSequence length="854" searchDatabase_ref="SearchDB_1" accession="gi\|529000951\|ref\|XP_005222651.1\|" id="DBSeq36028">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	181 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi\|529000951\|ref\|XP_005222651.1\| PREDICTED: rab effector MyRIP isoform X2 [Bos taurus]"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	182 </DBSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	183 <DBSequence length="627" searchDatabase_ref="SearchDB_1" accession="gi\|139948503\|ref\|NP_001077142.1\|" id="DBSeq36883">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	184 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi\|139948503\|ref\|NP_001077142.1\| uncharacterized protein LOC512219 [Bos taurus]"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	185 </DBSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	186 <DBSequence length="375" searchDatabase_ref="SearchDB_1" accession="gi\|28849955\|ref\|NP_788795.1\|" id="DBSeq38138">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	187 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi\|28849955\|ref\|NP_788795.1\| pregnancy-associated glycoprotein 12 precursor [Bos taurus]"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	188 </DBSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	189 <DBSequence length="376" searchDatabase_ref="SearchDB_1" accession="gi\|119924469\|ref\|XP_001252524.1\|" id="DBSeq49478">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	190 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi\|119924469\|ref\|XP_001252524.1\| PREDICTED: pregnancy-associated glycoprotein 2-like [Bos taurus]"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	191 </DBSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	192 <DBSequence length="768" searchDatabase_ref="SearchDB_1" accession="XXX_gi\|528993971\|ref\|XP_005219929.1\|" id="DBSeq87068"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	193 <DBSequence length="712" searchDatabase_ref="SearchDB_1" accession="XXX_gi\|528993973\|ref\|XP_005219930.1\|" id="DBSeq87837"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	194 <DBSequence length="685" searchDatabase_ref="SearchDB_1" accession="XXX_gi\|528993975\|ref\|XP_005219931.1\|" id="DBSeq88550"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	195 <DBSequence length="712" searchDatabase_ref="SearchDB_1" accession="XXX_gi\|27806851\|ref\|NP_776358.1\|" id="DBSeq103640"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	196 <DBSequence length="213" searchDatabase_ref="SearchDB_1" accession="XXX_gi\|528953234\|ref\|XP_005208080.1\|" id="DBSeq78837"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	197 <DBSequence length="206" searchDatabase_ref="SearchDB_1" accession="XXX_gi\|528953236\|ref\|XP_005208081.1\|" id="DBSeq79051"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	198 <DBSequence length="206" searchDatabase_ref="SearchDB_1" accession="XXX_gi\|528953238\|ref\|XP_005208082.1\|" id="DBSeq79258"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	199 <DBSequence length="206" searchDatabase_ref="SearchDB_1" accession="XXX_gi\|528953240\|ref\|XP_005208083.1\|" id="DBSeq79465"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	200 <DBSequence length="177" searchDatabase_ref="SearchDB_1" accession="XXX_gi\|528953246\|ref\|XP_005208086.1\|" id="DBSeq79672"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	201 <DBSequence length="214" searchDatabase_ref="SearchDB_1" accession="XXX_gi\|30794348\|ref\|NP_851372.1\|" id="DBSeq100983"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	202 <Peptide id="Pep_ISELFDKLDSMSVDK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	203 <PeptideSequence>ISELFDKLDSMSVDK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	204 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	205 <Peptide id="Pep_PKNDPKLKTQGK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	206 <PeptideSequence>PKNDPKLKTQGK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	207 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	208 <Peptide id="Pep_EPISVSSQQMLK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	209 <PeptideSequence>EPISVSSQQMLK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	210 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	211 <Peptide id="Pep_VWGFKVAGAQDEGK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	212 <PeptideSequence>VWGFKVAGAQDEGK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	213 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	214 <Peptide id="Pep_PTAEFQDR">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	215 <PeptideSequence>PTAEFQDR</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	216 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	217 <Peptide id="Pep_TVMENFVAFVDK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	218 <PeptideSequence>TVMENFVAFVDK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	219 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	220 <Peptide id="Pep_ESRCSRESRCSR">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	221 <PeptideSequence>ESRCSRESRCSR</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	222 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	223 <Peptide id="Pep_ACCEELTAEYEKALR">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	224 <PeptideSequence>ACCEELTAEYEKALR</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	225 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	226 <Peptide id="Pep_EVEDEGFLR">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	227 <PeptideSequence>EVEDEGFLR</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	228 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	229 <Peptide id="Pep_MHQIYVQCAKL">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	230 <PeptideSequence>MHQIYVQCAKL</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	231 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	232 <Peptide id="Pep_KKYMRWMNHKKSR">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	233 <PeptideSequence>KKYMRWMNHKKSR</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	234 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	235 <Peptide id="Pep_LAEAEKEGR">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	236 <PeptideSequence>LAEAEKEGR</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	237 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	238 <Peptide id="Pep_AEMFEHLSEK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	239 <PeptideSequence>AEMFEHLSEK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	240 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	241 <Peptide id="Pep_SFNQEPQYR">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	242 <PeptideSequence>SFNQEPQYR</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	243 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	244 <Peptide id="Pep_SKVNNYFWELSQTR">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	245 <PeptideSequence>SKVNNYFWELSQTR</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	246 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	247 <Peptide id="Pep_PNTEPTHHFI">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	248 <PeptideSequence>PNTEPTHHFI</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	249 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	250 <Peptide id="Pep_EGVAICKAGFR">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	251 <PeptideSequence>EGVAICKAGFR</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	252 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	253 <Peptide id="Pep_QLEDILVLAK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	254 <PeptideSequence>QLEDILVLAK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	255 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	256 <Peptide id="Pep_AAQGALQPSL">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	257 <PeptideSequence>AAQGALQPSL</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	258 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	259 <Peptide id="Pep_VNPVTALTLLEKMK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	260 <PeptideSequence>VNPVTALTLLEKMK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	261 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	262 <Peptide id="Pep_FEIWVELLKYLEEIRGK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	263 <PeptideSequence>FEIWVELLKYLEEIRGK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	264 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	265 <Peptide id="Pep_TIFDTEIESTSPK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	266 <PeptideSequence>TIFDTEIESTSPK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	267 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	268 <Peptide id="Pep_DTNIQICR">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	269 <PeptideSequence>DTNIQICR</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	270 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	271 <Peptide id="Pep_QLEGRLQDLR">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	272 <PeptideSequence>QLEGRLQDLR</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	273 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	274 <Peptide id="Pep_RAFQECER">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	275 <PeptideSequence>RAFQECER</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	276 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	277 <Peptide id="Pep_LECTNLYR">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	278 <PeptideSequence>LECTNLYR</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	279 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	280 <Peptide id="Pep_LMLLSRDDSGSGSK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	281 <PeptideSequence>LMLLSRDDSGSGSK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	282 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	283 <Peptide id="Pep_ATEGTQLFNDYCEQ">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	284 <PeptideSequence>ATEGTQLFNDYCEQ</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	285 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	286 <Peptide id="Pep_IQNGALNCEEKLTLAK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	287 <PeptideSequence>IQNGALNCEEKLTLAK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	288 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	289 <Peptide id="Pep_CVCDECGRGFGFK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	290 <PeptideSequence>CVCDECGRGFGFK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	291 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	292 <Peptide id="Pep_RMMESRQR">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	293 <PeptideSequence>RMMESRQR</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	294 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	295 <Peptide id="Pep_RSDVEQLDQEIK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	296 <PeptideSequence>RSDVEQLDQEIK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	297 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	298 <Peptide id="Pep_WQEYQSRVD">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	299 <PeptideSequence>WQEYQSRVD</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	300 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	301 <Peptide id="Pep_RKFIIHRGKRKAAQ">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	302 <PeptideSequence>RKFIIHRGKRKAAQ</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	303 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	304 <Peptide id="Pep_VKDIVNLTDVNP">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	305 <PeptideSequence>VKDIVNLTDVNP</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	306 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	307 <Peptide id="Pep_KELVDQRYDK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	308 <PeptideSequence>KELVDQRYDK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	309 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	310 <Peptide id="Pep_QNIDRCYPER">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	311 <PeptideSequence>QNIDRCYPER</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	312 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	313 <Peptide id="Pep_QLAQQTEQKGCR">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	314 <PeptideSequence>QLAQQTEQKGCR</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	315 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	316 <Peptide id="Pep_IFELEEH">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	317 <PeptideSequence>IFELEEH</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	318 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	319 <Peptide id="Pep_VFEEMIEPYCLHESCK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	320 <PeptideSequence>VFEEMIEPYCLHESCK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	321 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	322 <Peptide id="Pep_GLRFDWSLR">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	323 <PeptideSequence>GLRFDWSLR</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	324 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	325 <Peptide id="Pep_VLETLGINKRKIVNQLSNSLTR">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	326 <PeptideSequence>VLETLGINKRKIVNQLSNSLTR</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	327 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	328 <Peptide id="Pep_DPDNSIELE">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	329 <PeptideSequence>DPDNSIELE</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	330 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	331 <Peptide id="Pep_LIIQLEQGDEPWR">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	332 <PeptideSequence>LIIQLEQGDEPWR</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	333 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	334 <Peptide id="Pep_DPAPEGEIEMLDHAVK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	335 <PeptideSequence>DPAPEGEIEMLDHAVK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	336 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	337 <Peptide id="Pep_EVMEHR">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	338 <PeptideSequence>EVMEHR</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	339 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	340 <Peptide id="Pep_YNKCVDK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	341 <PeptideSequence>YNKCVDK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	342 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	343 <Peptide id="Pep_GFGRGCER">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	344 <PeptideSequence>GFGRGCER</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	345 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	346 <Peptide id="Pep_QLAQKYNCDK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	347 <PeptideSequence>QLAQKYNCDK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	348 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	349 <Peptide id="Pep_DLGEEHF">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	350 <PeptideSequence>DLGEEHF</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	351 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	352 <Peptide id="Pep_DLPFLSNEYK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	353 <PeptideSequence>DLPFLSNEYK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	354 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	355 <Peptide id="Pep_DAHQKELVDQRYDK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	356 <PeptideSequence>DAHQKELVDQRYDK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	357 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	358 <Peptide id="Pep_QLQEELAEHQ">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	359 <PeptideSequence>QLQEELAEHQ</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	360 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	361 <Peptide id="Pep_DAENTVRGR">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	362 <PeptideSequence>DAENTVRGR</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	363 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	364 <Peptide id="Pep_LNKDEVVTVDEAK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	365 <PeptideSequence>LNKDEVVTVDEAK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	366 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	367 <Peptide id="Pep_LSETEMR">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	368 <PeptideSequence>LSETEMR</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	369 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	370 <Peptide id="Pep_DELVCEDNK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	371 <PeptideSequence>DELVCEDNK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	372 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	373 <Peptide id="Pep_CIMKDCNYKQ">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	374 <PeptideSequence>CIMKDCNYKQ</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	375 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	376 <Peptide id="Pep_ALDARDDACELLDGHCCEKHVK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	377 <PeptideSequence>ALDARDDACELLDGHCCEKHVK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	378 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	379 <Peptide id="Pep_FGYEEQSLGFSQK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	380 <PeptideSequence>FGYEEQSLGFSQK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	381 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	382 <Peptide id="Pep_AQQCVCCVWVK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	383 <PeptideSequence>AQQCVCCVWVK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	384 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	385 <Peptide id="Pep_FFNPDDE">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	386 <PeptideSequence>FFNPDDE</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	387 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	388 <Peptide id="Pep_HAAEEEIY">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	389 <PeptideSequence>HAAEEEIY</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	390 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	391 <Peptide id="Pep_MPPLIPAEVDK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	392 <PeptideSequence>MPPLIPAEVDK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	393 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	394 <Peptide id="Pep_ESRELWNEF">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	395 <PeptideSequence>ESRELWNEF</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	396 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	397 <Peptide id="Pep_YYKVDE">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	398 <PeptideSequence>YYKVDE</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	399 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	400 <Peptide id="Pep_MMSASSYNE">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	401 <PeptideSequence>MMSASSYNE</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	402 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	403 <Peptide id="Pep_LMHDPSR">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	404 <PeptideSequence>LMHDPSR</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	405 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	406 <Peptide id="Pep_YDGLVEQ">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	407 <PeptideSequence>YDGLVEQ</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	408 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	409 <Peptide id="Pep_RCYPER">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	410 <PeptideSequence>RCYPER</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	411 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	412 <Peptide id="Pep_ARGCSEELS">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	413 <PeptideSequence>ARGCSEELS</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	414 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	415 <Peptide id="Pep_AMFEELSSLK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	416 <PeptideSequence>AMFEELSSLK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	417 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	418 <Peptide id="Pep_LIRRQRLRPR">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	419 <PeptideSequence>LIRRQRLRPR</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	420 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	421 <Peptide id="Pep_CDDQNKR">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	422 <PeptideSequence>CDDQNKR</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	423 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	424 <Peptide id="Pep_EACFAVEGP">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	425 <PeptideSequence>EACFAVEGP</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	426 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	427 <Peptide id="Pep_SKEVSNLEFSDR">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	428 <PeptideSequence>SKEVSNLEFSDR</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	429 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	430 <Peptide id="Pep_EKTGNTSSDQ">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	431 <PeptideSequence>EKTGNTSSDQ</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	432 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	433 <Peptide id="Pep_WGLDMERAGGQK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	434 <PeptideSequence>WGLDMERAGGQK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	435 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	436 <Peptide id="Pep_EGQMVEEKYQK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	437 <PeptideSequence>EGQMVEEKYQK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	438 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	439 <Peptide id="Pep_NTPDVMMSDTEK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	440 <PeptideSequence>NTPDVMMSDTEK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	441 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	442 <Peptide id="Pep_KECGAHSEDAVCTK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	443 <PeptideSequence>KECGAHSEDAVCTK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	444 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	445 <Peptide id="Pep_PDIGDPNWISGDSE">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	446 <PeptideSequence>PDIGDPNWISGDSE</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	447 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	448 <Peptide id="Pep_ELNPEEGQMVEEKYQ">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	449 <PeptideSequence>ELNPEEGQMVEEKYQ</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	450 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	451 <Peptide id="Pep_NQDALTFFNSNQVS">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	452 <PeptideSequence>NQDALTFFNSNQVS</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	453 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	454 <Peptide id="Pep_DERDAAAESYHR">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	455 <PeptideSequence>DERDAAAESYHR</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	456 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	457 <Peptide id="Pep_NCNGSAACGLGYDFSR">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	458 <PeptideSequence>NCNGSAACGLGYDFSR</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	459 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	460 <Peptide id="Pep_QSFGLSQEEYGFDGA">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	461 <PeptideSequence>QSFGLSQEEYGFDGA</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	462 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	463 <Peptide id="Pep_THKMYEAD">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	464 <PeptideSequence>THKMYEAD</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	465 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	466 <Peptide id="Pep_AEDEPEWPQ">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	467 <PeptideSequence>AEDEPEWPQ</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	468 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	469 <Peptide id="Pep_TEGPTYETER">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	470 <PeptideSequence>TEGPTYETER</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	471 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	472 <Peptide id="Pep_ASINPNNDSWDYALEE">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	473 <PeptideSequence>ASINPNNDSWDYALEE</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	474 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	475 <Peptide id="Pep_KQEESAEAGAPG">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	476 <PeptideSequence>KQEESAEAGAPG</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	477 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	478 <Peptide id="Pep_PFVCLECGR">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	479 <PeptideSequence>PFVCLECGR</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	480 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	481 <Peptide id="Pep_ENLEQAFE">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	482 <PeptideSequence>ENLEQAFE</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	483 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	484 <Peptide id="Pep_WDFDEES">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	485 <PeptideSequence>WDFDEES</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	486 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	487 <Peptide id="Pep_HYCGKCCL">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	488 <PeptideSequence>HYCGKCCL</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	489 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	490 <Peptide id="Pep_PPGAQGAEGGGSAEG">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	491 <PeptideSequence>PPGAQGAEGGGSAEG</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	492 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	493 <Peptide id="Pep_NQQPSLDQAHES">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	494 <PeptideSequence>NQQPSLDQAHES</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	495 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	496 <Peptide id="Pep_EGDYVSR">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	497 <PeptideSequence>EGDYVSR</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	498 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	499 <Peptide id="Pep_EEDASSCQEQ">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	500 <PeptideSequence>EEDASSCQEQ</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	501 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	502 <Peptide id="Pep_DENYYQ">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	503 <PeptideSequence>DENYYQ</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	504 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	505 <Peptide id="Pep_ESEGKGCSMEAPQ">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	506 <PeptideSequence>ESEGKGCSMEAPQ</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	507 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	508 <Peptide id="Pep_GEVAFCAEKDDAACCK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	509 <PeptideSequence>GEVAFCAEKDDAACCK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	510 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	511 <Peptide id="Pep_MCNFHYQG">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	512 <PeptideSequence>MCNFHYQG</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	513 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	514 <Peptide id="Pep_HGRDWF">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	515 <PeptideSequence>HGRDWF</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	516 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	517 <Peptide id="Pep_EDLVPWIEDCK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	518 <PeptideSequence>EDLVPWIEDCK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	519 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	520 <Peptide id="Pep_MGHDRCR">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	521 <PeptideSequence>MGHDRCR</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	522 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	523 <Peptide id="Pep_EEEKEEEE">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	524 <PeptideSequence>EEEKEEEE</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	525 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	526 <Peptide id="Pep_TGNTSSDQ">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	527 <PeptideSequence>TGNTSSDQ</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	528 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	529 <Peptide id="Pep_YNCDKMIC">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	530 <PeptideSequence>YNCDKMIC</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	531 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	532 <Peptide id="Pep_CGDCKFNVC">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	533 <PeptideSequence>CGDCKFNVC</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	534 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	535 <Peptide id="Pep_PRALAVAVLCTLILL">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	536 <PeptideSequence>PRALAVAVLCTLILL</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	537 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	538 <Peptide id="Pep_CTNFSSCWSDGKM">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	539 <PeptideSequence>CTNFSSCWSDGKM</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	540 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	541 <PeptideEvidence dBSequence_ref="DBSeq83632" peptide_ref="Pep_ISELFDKLDSMSVDK" start="607" end="621" pre="R" post="I" isDecoy="true" id="PepEv_84238_ISELFDKLDSMSVDK_607"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	542 <PeptideEvidence dBSequence_ref="DBSeq84448" peptide_ref="Pep_ISELFDKLDSMSVDK" start="603" end="617" pre="R" post="I" isDecoy="true" id="PepEv_85050_ISELFDKLDSMSVDK_603"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	543 <PeptideEvidence dBSequence_ref="DBSeq85260" peptide_ref="Pep_ISELFDKLDSMSVDK" start="558" end="572" pre="R" post="I" isDecoy="true" id="PepEv_85817_ISELFDKLDSMSVDK_558"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	544 <PeptideEvidence dBSequence_ref="DBSeq93486" peptide_ref="Pep_ISELFDKLDSMSVDK" start="418" end="432" pre="R" post="I" isDecoy="true" id="PepEv_93903_ISELFDKLDSMSVDK_418"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	545 <PeptideEvidence dBSequence_ref="DBSeq31093" peptide_ref="Pep_PKNDPKLKTQGK" start="318" end="329" pre="F" post="C" isDecoy="false" id="PepEv_31410_PKNDPKLKTQGK_318"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	546 <PeptideEvidence dBSequence_ref="DBSeq31862" peptide_ref="Pep_PKNDPKLKTQGK" start="262" end="273" pre="F" post="C" isDecoy="false" id="PepEv_32123_PKNDPKLKTQGK_262"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	547 <PeptideEvidence dBSequence_ref="DBSeq32575" peptide_ref="Pep_PKNDPKLKTQGK" start="235" end="246" pre="F" post="C" isDecoy="false" id="PepEv_32809_PKNDPKLKTQGK_235"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	548 <PeptideEvidence dBSequence_ref="DBSeq47665" peptide_ref="Pep_PKNDPKLKTQGK" start="262" end="273" pre="F" post="C" isDecoy="false" id="PepEv_47926_PKNDPKLKTQGK_262"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	549 <PeptideEvidence dBSequence_ref="DBSeq46845" peptide_ref="Pep_EPISVSSQQMLK" start="213" end="224" pre="K" post="F" isDecoy="false" id="PepEv_47057_EPISVSSQQMLK_213"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	550 <PeptideEvidence dBSequence_ref="DBSeq104353" peptide_ref="Pep_VWGFKVAGAQDEGK" start="920" end="933" pre="K" post="N" isDecoy="true" id="PepEv_105272_VWGFKVAGAQDEGK_920"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	551 <PeptideEvidence dBSequence_ref="DBSeq107227" peptide_ref="Pep_VWGFKVAGAQDEGK" start="952" end="965" pre="K" post="N" isDecoy="true" id="PepEv_108178_VWGFKVAGAQDEGK_952"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	552 <PeptideEvidence dBSequence_ref="DBSeq108359" peptide_ref="Pep_VWGFKVAGAQDEGK" start="920" end="933" pre="K" post="N" isDecoy="true" id="PepEv_109278_VWGFKVAGAQDEGK_920"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	553 <PeptideEvidence dBSequence_ref="DBSeq109459" peptide_ref="Pep_VWGFKVAGAQDEGK" start="920" end="933" pre="K" post="N" isDecoy="true" id="PepEv_110378_VWGFKVAGAQDEGK_920"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	554 <PeptideEvidence dBSequence_ref="DBSeq47106" peptide_ref="Pep_PTAEFQDR" start="489" end="496" pre="V" post="I" isDecoy="false" id="PepEv_47594_PTAEFQDR_489"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	555 <PeptideEvidence dBSequence_ref="DBSeq43937" peptide_ref="Pep_TVMENFVAFVDK" start="569" end="580" pre="K" post="C" isDecoy="false" id="PepEv_44505_TVMENFVAFVDK_569"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	556 <PeptideEvidence dBSequence_ref="DBSeq65480" peptide_ref="Pep_ESRCSRESRCSR" start="7512" end="7523" pre="R" post="E" isDecoy="true" id="PepEv_72991_ESRCSRESRCSR_7512"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	557 <PeptideEvidence dBSequence_ref="DBSeq73091" peptide_ref="Pep_ESRCSRESRCSR" start="5400" end="5411" pre="R" post="E" isDecoy="true" id="PepEv_78490_ESRCSRESRCSR_5400"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	558 <PeptideEvidence dBSequence_ref="DBSeq94489" peptide_ref="Pep_ESRCSRESRCSR" start="5400" end="5411" pre="R" post="E" isDecoy="true" id="PepEv_99888_ESRCSRESRCSR_5400"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	559 <PeptideEvidence dBSequence_ref="DBSeq99912" peptide_ref="Pep_ACCEELTAEYEKALR" start="223" end="237" pre="K" post="L" isDecoy="true" id="PepEv_100134_ACCEELTAEYEKALR_223"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	560 <PeptideEvidence dBSequence_ref="DBSeq65480" peptide_ref="Pep_EVEDEGFLR" start="1995" end="2003" pre="V" post="A" isDecoy="true" id="PepEv_67474_EVEDEGFLR_1995"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	561 <PeptideEvidence dBSequence_ref="DBSeq73091" peptide_ref="Pep_EVEDEGFLR" start="1925" end="1933" pre="V" post="A" isDecoy="true" id="PepEv_75015_EVEDEGFLR_1925"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	562 <PeptideEvidence dBSequence_ref="DBSeq94489" peptide_ref="Pep_EVEDEGFLR" start="1925" end="1933" pre="V" post="A" isDecoy="true" id="PepEv_96413_EVEDEGFLR_1925"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	563 <PeptideEvidence dBSequence_ref="DBSeq60575" peptide_ref="Pep_MHQIYVQCAKL" start="39" end="49" pre="R" post="S" isDecoy="true" id="PepEv_60613_MHQIYVQCAKL_39"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	564 <PeptideEvidence dBSequence_ref="DBSeq61828" peptide_ref="Pep_MHQIYVQCAKL" start="39" end="49" pre="R" post="S" isDecoy="true" id="PepEv_61866_MHQIYVQCAKL_39"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	565 <PeptideEvidence dBSequence_ref="DBSeq89848" peptide_ref="Pep_MHQIYVQCAKL" start="39" end="49" pre="R" post="S" isDecoy="true" id="PepEv_89886_MHQIYVQCAKL_39"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	566 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_KKYMRWMNHKKSR" start="7189" end="7201" pre="R" post="V" isDecoy="false" id="PepEv_16693_KKYMRWMNHKKSR_7189"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	567 <PeptideEvidence dBSequence_ref="DBSeq17116" peptide_ref="Pep_KKYMRWMNHKKSR" start="5143" end="5155" pre="R" post="V" isDecoy="false" id="PepEv_22258_KKYMRWMNHKKSR_5143"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	568 <PeptideEvidence dBSequence_ref="DBSeq38514" peptide_ref="Pep_KKYMRWMNHKKSR" start="5067" end="5079" pre="R" post="V" isDecoy="false" id="PepEv_43580_KKYMRWMNHKKSR_5067"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	569 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_LAEAEKEGR" start="2678" end="2686" pre="T" post="L" isDecoy="false" id="PepEv_12182_LAEAEKEGR_2678"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	570 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_AEMFEHLSEK" start="4266" end="4275" pre="Q" post="L" isDecoy="false" id="PepEv_13770_AEMFEHLSEK_4266"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	571 <PeptideEvidence dBSequence_ref="DBSeq17116" peptide_ref="Pep_AEMFEHLSEK" start="2224" end="2233" pre="Q" post="L" isDecoy="false" id="PepEv_19339_AEMFEHLSEK_2224"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	572 <PeptideEvidence dBSequence_ref="DBSeq38514" peptide_ref="Pep_AEMFEHLSEK" start="2148" end="2157" pre="Q" post="L" isDecoy="false" id="PepEv_40661_AEMFEHLSEK_2148"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	573 <PeptideEvidence dBSequence_ref="DBSeq92858" peptide_ref="Pep_SFNQEPQYR" start="190" end="198" pre="K" post="L" isDecoy="true" id="PepEv_93047_SFNQEPQYR_190"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	574 <PeptideEvidence dBSequence_ref="DBSeq63026" peptide_ref="Pep_SKVNNYFWELSQTR" start="728" end="741" pre="R" post="L" isDecoy="true" id="PepEv_63753_SKVNNYFWELSQTR_728"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	575 <PeptideEvidence dBSequence_ref="DBSeq63881" peptide_ref="Pep_SKVNNYFWELSQTR" start="728" end="741" pre="R" post="L" isDecoy="true" id="PepEv_64608_SKVNNYFWELSQTR_728"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	576 <PeptideEvidence dBSequence_ref="DBSeq91148" peptide_ref="Pep_SKVNNYFWELSQTR" start="728" end="741" pre="R" post="L" isDecoy="true" id="PepEv_91875_SKVNNYFWELSQTR_728"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	577 <PeptideEvidence dBSequence_ref="DBSeq92003" peptide_ref="Pep_SKVNNYFWELSQTR" start="728" end="741" pre="R" post="L" isDecoy="true" id="PepEv_92730_SKVNNYFWELSQTR_728"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	578 <PeptideEvidence dBSequence_ref="DBSeq8761" peptide_ref="Pep_PNTEPTHHFI" start="460" end="469" pre="R" post="H" isDecoy="false" id="PepEv_9220_PNTEPTHHFI_460"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	579 <PeptideEvidence dBSequence_ref="DBSeq103081" peptide_ref="Pep_EGVAICKAGFR" start="227" end="237" pre="S" post="H" isDecoy="true" id="PepEv_103307_EGVAICKAGFR_227"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	580 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_QLEDILVLAK" start="5490" end="5499" pre="K" post="Q" isDecoy="false" id="PepEv_14994_QLEDILVLAK_5490"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	581 <PeptideEvidence dBSequence_ref="DBSeq17116" peptide_ref="Pep_QLEDILVLAK" start="3448" end="3457" pre="K" post="Q" isDecoy="false" id="PepEv_20563_QLEDILVLAK_3448"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	582 <PeptideEvidence dBSequence_ref="DBSeq38514" peptide_ref="Pep_QLEDILVLAK" start="3372" end="3381" pre="K" post="Q" isDecoy="false" id="PepEv_41885_QLEDILVLAK_3372"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	583 <PeptideEvidence dBSequence_ref="DBSeq4600" peptide_ref="Pep_AAQGALQPSL" start="1030" end="1039" pre="K" post="Y" isDecoy="false" id="PepEv_5629_AAQGALQPSL_1030"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	584 <PeptideEvidence dBSequence_ref="DBSeq5853" peptide_ref="Pep_AAQGALQPSL" start="975" end="984" pre="K" post="Y" isDecoy="false" id="PepEv_6827_AAQGALQPSL_975"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	585 <PeptideEvidence dBSequence_ref="DBSeq33873" peptide_ref="Pep_AAQGALQPSL" start="1077" end="1086" pre="K" post="Y" isDecoy="false" id="PepEv_34949_AAQGALQPSL_1077"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	586 <PeptideEvidence dBSequence_ref="DBSeq28473" peptide_ref="Pep_VNPVTALTLLEKMK" start="759" end="772" pre="R" post="D" isDecoy="false" id="PepEv_29231_VNPVTALTLLEKMK_759"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	587 <PeptideEvidence dBSequence_ref="DBSeq65480" peptide_ref="Pep_FEIWVELLKYLEEIRGK" start="7148" end="7164" pre="G" post="E" isDecoy="true" id="PepEv_72627_FEIWVELLKYLEEIRGK_7148"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	588 <PeptideEvidence dBSequence_ref="DBSeq73091" peptide_ref="Pep_FEIWVELLKYLEEIRGK" start="5036" end="5052" pre="G" post="E" isDecoy="true" id="PepEv_78126_FEIWVELLKYLEEIRGK_5036"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	589 <PeptideEvidence dBSequence_ref="DBSeq94489" peptide_ref="Pep_FEIWVELLKYLEEIRGK" start="5036" end="5052" pre="G" post="E" isDecoy="true" id="PepEv_99524_FEIWVELLKYLEEIRGK_5036"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	590 <PeptideEvidence dBSequence_ref="DBSeq27657" peptide_ref="Pep_TIFDTEIESTSPK" start="252" end="264" pre="Y" post="S" isDecoy="false" id="PepEv_27908_TIFDTEIESTSPK_252"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	591 <PeptideEvidence dBSequence_ref="DBSeq28473" peptide_ref="Pep_TIFDTEIESTSPK" start="252" end="264" pre="Y" post="S" isDecoy="false" id="PepEv_28724_TIFDTEIESTSPK_252"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	592 <PeptideEvidence dBSequence_ref="DBSeq29285" peptide_ref="Pep_TIFDTEIESTSPK" start="252" end="264" pre="Y" post="S" isDecoy="false" id="PepEv_29536_TIFDTEIESTSPK_252"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	593 <PeptideEvidence dBSequence_ref="DBSeq37511" peptide_ref="Pep_TIFDTEIESTSPK" start="252" end="264" pre="Y" post="S" isDecoy="false" id="PepEv_37762_TIFDTEIESTSPK_252"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	594 <PeptideEvidence dBSequence_ref="DBSeq60575" peptide_ref="Pep_DTNIQICR" start="194" end="201" pre="S" post="T" isDecoy="true" id="PepEv_60768_DTNIQICR_194"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	595 <PeptideEvidence dBSequence_ref="DBSeq61828" peptide_ref="Pep_DTNIQICR" start="194" end="201" pre="S" post="T" isDecoy="true" id="PepEv_62021_DTNIQICR_194"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	596 <PeptideEvidence dBSequence_ref="DBSeq89848" peptide_ref="Pep_DTNIQICR" start="194" end="201" pre="S" post="T" isDecoy="true" id="PepEv_90041_DTNIQICR_194"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	597 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_QLEGRLQDLR" start="3542" end="3551" pre="E" post="A" isDecoy="false" id="PepEv_13046_QLEGRLQDLR_3542"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	598 <PeptideEvidence dBSequence_ref="DBSeq83632" peptide_ref="Pep_RAFQECER" start="105" end="112" pre="S" post="V" isDecoy="true" id="PepEv_83736_RAFQECER_105"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	599 <PeptideEvidence dBSequence_ref="DBSeq84448" peptide_ref="Pep_RAFQECER" start="101" end="108" pre="S" post="V" isDecoy="true" id="PepEv_84548_RAFQECER_101"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	600 <PeptideEvidence dBSequence_ref="DBSeq85260" peptide_ref="Pep_RAFQECER" start="56" end="63" pre="S" post="V" isDecoy="true" id="PepEv_85315_RAFQECER_56"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	601 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_LECTNLYR" start="597" end="604" pre="R" post="K" isDecoy="false" id="PepEv_10101_LECTNLYR_597"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	602 <PeptideEvidence dBSequence_ref="DBSeq17116" peptide_ref="Pep_LECTNLYR" start="597" end="604" pre="R" post="K" isDecoy="false" id="PepEv_17712_LECTNLYR_597"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	603 <PeptideEvidence dBSequence_ref="DBSeq38514" peptide_ref="Pep_LECTNLYR" start="521" end="528" pre="R" post="K" isDecoy="false" id="PepEv_39034_LECTNLYR_521"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	604 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_LMLLSRDDSGSGSK" start="6550" end="6563" pre="R" post="T" isDecoy="false" id="PepEv_16054_LMLLSRDDSGSGSK_6550"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	605 <PeptideEvidence dBSequence_ref="DBSeq17116" peptide_ref="Pep_LMLLSRDDSGSGSK" start="4508" end="4521" pre="R" post="T" isDecoy="false" id="PepEv_21623_LMLLSRDDSGSGSK_4508"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	606 <PeptideEvidence dBSequence_ref="DBSeq38514" peptide_ref="Pep_LMLLSRDDSGSGSK" start="4432" end="4445" pre="R" post="T" isDecoy="false" id="PepEv_42945_LMLLSRDDSGSGSK_4432"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	607 <PeptideEvidence dBSequence_ref="DBSeq104353" peptide_ref="Pep_ATEGTQLFNDYCEQ" start="1020" end="1033" pre="K" post="N" isDecoy="true" id="PepEv_105372_ATEGTQLFNDYCEQ_1020"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	608 <PeptideEvidence dBSequence_ref="DBSeq107227" peptide_ref="Pep_ATEGTQLFNDYCEQ" start="1052" end="1065" pre="K" post="N" isDecoy="true" id="PepEv_108278_ATEGTQLFNDYCEQ_1052"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	609 <PeptideEvidence dBSequence_ref="DBSeq108359" peptide_ref="Pep_ATEGTQLFNDYCEQ" start="1020" end="1033" pre="K" post="N" isDecoy="true" id="PepEv_109378_ATEGTQLFNDYCEQ_1020"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	610 <PeptideEvidence dBSequence_ref="DBSeq109459" peptide_ref="Pep_ATEGTQLFNDYCEQ" start="1020" end="1033" pre="K" post="N" isDecoy="true" id="PepEv_110478_ATEGTQLFNDYCEQ_1020"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	611 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_IQNGALNCEEKLTLAK" start="512" end="527" pre="K" post="N" isDecoy="false" id="PepEv_10016_IQNGALNCEEKLTLAK_512"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	612 <PeptideEvidence dBSequence_ref="DBSeq17116" peptide_ref="Pep_IQNGALNCEEKLTLAK" start="512" end="527" pre="K" post="N" isDecoy="false" id="PepEv_17627_IQNGALNCEEKLTLAK_512"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	613 <PeptideEvidence dBSequence_ref="DBSeq38514" peptide_ref="Pep_IQNGALNCEEKLTLAK" start="436" end="451" pre="K" post="N" isDecoy="false" id="PepEv_38949_IQNGALNCEEKLTLAK_436"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	614 <PeptideEvidence dBSequence_ref="DBSeq248" peptide_ref="Pep_CVCDECGRGFGFK" start="554" end="566" pre="P" post="S" isDecoy="false" id="PepEv_801_CVCDECGRGFGFK_554"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	615 <PeptideEvidence dBSequence_ref="DBSeq865" peptide_ref="Pep_CVCDECGRGFGFK" start="554" end="566" pre="P" post="S" isDecoy="false" id="PepEv_1418_CVCDECGRGFGFK_554"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	616 <PeptideEvidence dBSequence_ref="DBSeq1482" peptide_ref="Pep_CVCDECGRGFGFK" start="554" end="566" pre="P" post="S" isDecoy="false" id="PepEv_2035_CVCDECGRGFGFK_554"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	617 <PeptideEvidence dBSequence_ref="DBSeq2099" peptide_ref="Pep_CVCDECGRGFGFK" start="553" end="565" pre="P" post="S" isDecoy="false" id="PepEv_2651_CVCDECGRGFGFK_553"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	618 <PeptideEvidence dBSequence_ref="DBSeq2715" peptide_ref="Pep_CVCDECGRGFGFK" start="534" end="546" pre="P" post="S" isDecoy="false" id="PepEv_3248_CVCDECGRGFGFK_534"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	619 <PeptideEvidence dBSequence_ref="DBSeq3312" peptide_ref="Pep_CVCDECGRGFGFK" start="526" end="538" pre="P" post="S" isDecoy="false" id="PepEv_3837_CVCDECGRGFGFK_526"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	620 <PeptideEvidence dBSequence_ref="DBSeq24004" peptide_ref="Pep_CVCDECGRGFGFK" start="554" end="566" pre="P" post="S" isDecoy="false" id="PepEv_24557_CVCDECGRGFGFK_554"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	621 <PeptideEvidence dBSequence_ref="DBSeq24621" peptide_ref="Pep_CVCDECGRGFGFK" start="554" end="566" pre="P" post="S" isDecoy="false" id="PepEv_25174_CVCDECGRGFGFK_554"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	622 <PeptideEvidence dBSequence_ref="DBSeq25238" peptide_ref="Pep_CVCDECGRGFGFK" start="554" end="566" pre="P" post="S" isDecoy="false" id="PepEv_25791_CVCDECGRGFGFK_554"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	623 <PeptideEvidence dBSequence_ref="DBSeq25855" peptide_ref="Pep_CVCDECGRGFGFK" start="553" end="565" pre="P" post="S" isDecoy="false" id="PepEv_26407_CVCDECGRGFGFK_553"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	624 <PeptideEvidence dBSequence_ref="DBSeq26471" peptide_ref="Pep_CVCDECGRGFGFK" start="534" end="546" pre="P" post="S" isDecoy="false" id="PepEv_27004_CVCDECGRGFGFK_534"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	625 <PeptideEvidence dBSequence_ref="DBSeq27068" peptide_ref="Pep_CVCDECGRGFGFK" start="526" end="538" pre="P" post="S" isDecoy="false" id="PepEv_27593_CVCDECGRGFGFK_526"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	626 <PeptideEvidence dBSequence_ref="DBSeq64736" peptide_ref="Pep_RMMESRQR" start="33" end="40" pre="K" post="S" isDecoy="true" id="PepEv_64768_RMMESRQR_33"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	627 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_RSDVEQLDQEIK" start="4778" end="4789" pre="I" post="E" isDecoy="false" id="PepEv_14282_RSDVEQLDQEIK_4778"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	628 <PeptideEvidence dBSequence_ref="DBSeq17116" peptide_ref="Pep_RSDVEQLDQEIK" start="2736" end="2747" pre="I" post="E" isDecoy="false" id="PepEv_19851_RSDVEQLDQEIK_2736"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	629 <PeptideEvidence dBSequence_ref="DBSeq38514" peptide_ref="Pep_RSDVEQLDQEIK" start="2660" end="2671" pre="I" post="E" isDecoy="false" id="PepEv_41173_RSDVEQLDQEIK_2660"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	630 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_WQEYQSRVD" start="392" end="400" pre="R" post="S" isDecoy="false" id="PepEv_9896_WQEYQSRVD_392"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	631 <PeptideEvidence dBSequence_ref="DBSeq17116" peptide_ref="Pep_WQEYQSRVD" start="392" end="400" pre="R" post="S" isDecoy="false" id="PepEv_17507_WQEYQSRVD_392"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	632 <PeptideEvidence dBSequence_ref="DBSeq38514" peptide_ref="Pep_WQEYQSRVD" start="316" end="324" pre="R" post="S" isDecoy="false" id="PepEv_38829_WQEYQSRVD_316"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	633 <PeptideEvidence dBSequence_ref="DBSeq4600" peptide_ref="Pep_RKFIIHRGKRKAAQ" start="1019" end="1032" pre="K" post="G" isDecoy="false" id="PepEv_5618_RKFIIHRGKRKAAQ_1019"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	634 <PeptideEvidence dBSequence_ref="DBSeq5853" peptide_ref="Pep_RKFIIHRGKRKAAQ" start="964" end="977" pre="K" post="G" isDecoy="false" id="PepEv_6816_RKFIIHRGKRKAAQ_964"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	635 <PeptideEvidence dBSequence_ref="DBSeq33873" peptide_ref="Pep_RKFIIHRGKRKAAQ" start="1066" end="1079" pre="K" post="G" isDecoy="false" id="PepEv_34938_RKFIIHRGKRKAAQ_1066"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	636 <PeptideEvidence dBSequence_ref="DBSeq65480" peptide_ref="Pep_VKDIVNLTDVNP" start="5424" end="5435" pre="K" post="N" isDecoy="true" id="PepEv_70903_VKDIVNLTDVNP_5424"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	637 <PeptideEvidence dBSequence_ref="DBSeq65480" peptide_ref="Pep_KELVDQRYDK" start="1968" end="1977" pre="Q" post="V" isDecoy="true" id="PepEv_67447_KELVDQRYDK_1968"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	638 <PeptideEvidence dBSequence_ref="DBSeq73091" peptide_ref="Pep_KELVDQRYDK" start="1898" end="1907" pre="Q" post="V" isDecoy="true" id="PepEv_74988_KELVDQRYDK_1898"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	639 <PeptideEvidence dBSequence_ref="DBSeq94489" peptide_ref="Pep_KELVDQRYDK" start="1898" end="1907" pre="Q" post="V" isDecoy="true" id="PepEv_96386_KELVDQRYDK_1898"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	640 <PeptideEvidence dBSequence_ref="DBSeq105830" peptide_ref="Pep_QNIDRCYPER" start="11" end="20" pre="L" post="Q" isDecoy="true" id="PepEv_105840_QNIDRCYPER_11"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	641 <PeptideEvidence dBSequence_ref="DBSeq106550" peptide_ref="Pep_QNIDRCYPER" start="11" end="20" pre="L" post="Q" isDecoy="true" id="PepEv_106560_QNIDRCYPER_11"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	642 <PeptideEvidence dBSequence_ref="DBSeq110897" peptide_ref="Pep_QNIDRCYPER" start="11" end="20" pre="L" post="Q" isDecoy="true" id="PepEv_110907_QNIDRCYPER_11"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	643 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_QLAQQTEQKGCR" start="1613" end="1624" pre="S" post="A" isDecoy="false" id="PepEv_11117_QLAQQTEQKGCR_1613"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	644 <PeptideEvidence dBSequence_ref="DBSeq65480" peptide_ref="Pep_IFELEEH" start="1395" end="1401" pre="R" post="L" isDecoy="true" id="PepEv_66874_IFELEEH_1395"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	645 <PeptideEvidence dBSequence_ref="DBSeq73091" peptide_ref="Pep_IFELEEH" start="1325" end="1331" pre="R" post="L" isDecoy="true" id="PepEv_74415_IFELEEH_1325"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	646 <PeptideEvidence dBSequence_ref="DBSeq94489" peptide_ref="Pep_IFELEEH" start="1325" end="1331" pre="R" post="L" isDecoy="true" id="PepEv_95813_IFELEEH_1325"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	647 <PeptideEvidence dBSequence_ref="DBSeq48378" peptide_ref="Pep_VFEEMIEPYCLHESCK" start="990" end="1005" pre="K" post="D" isDecoy="false" id="PepEv_49367_VFEEMIEPYCLHESCK_990"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	648 <PeptideEvidence dBSequence_ref="DBSeq51252" peptide_ref="Pep_VFEEMIEPYCLHESCK" start="1022" end="1037" pre="K" post="D" isDecoy="false" id="PepEv_52273_VFEEMIEPYCLHESCK_1022"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	649 <PeptideEvidence dBSequence_ref="DBSeq52384" peptide_ref="Pep_VFEEMIEPYCLHESCK" start="990" end="1005" pre="K" post="D" isDecoy="false" id="PepEv_53373_VFEEMIEPYCLHESCK_990"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	650 <PeptideEvidence dBSequence_ref="DBSeq53484" peptide_ref="Pep_VFEEMIEPYCLHESCK" start="990" end="1005" pre="K" post="D" isDecoy="false" id="PepEv_54473_VFEEMIEPYCLHESCK_990"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	651 <PeptideEvidence dBSequence_ref="DBSeq105830" peptide_ref="Pep_GLRFDWSLR" start="528" end="536" pre="P" post="E" isDecoy="true" id="PepEv_106357_GLRFDWSLR_528"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	652 <PeptideEvidence dBSequence_ref="DBSeq106550" peptide_ref="Pep_GLRFDWSLR" start="528" end="536" pre="P" post="E" isDecoy="true" id="PepEv_107077_GLRFDWSLR_528"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	653 <PeptideEvidence dBSequence_ref="DBSeq110897" peptide_ref="Pep_GLRFDWSLR" start="528" end="536" pre="P" post="E" isDecoy="true" id="PepEv_111424_GLRFDWSLR_528"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	654 <PeptideEvidence dBSequence_ref="DBSeq83632" peptide_ref="Pep_VLETLGINKRKIVNQLSNSLTR" start="259" end="280" pre="Q" post="T" isDecoy="true" id="PepEv_83890_VLETLGINKRKIVNQLSNSLTR_259"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	655 <PeptideEvidence dBSequence_ref="DBSeq84448" peptide_ref="Pep_VLETLGINKRKIVNQLSNSLTR" start="255" end="276" pre="Q" post="T" isDecoy="true" id="PepEv_84702_VLETLGINKRKIVNQLSNSLTR_255"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	656 <PeptideEvidence dBSequence_ref="DBSeq85260" peptide_ref="Pep_VLETLGINKRKIVNQLSNSLTR" start="210" end="231" pre="Q" post="T" isDecoy="true" id="PepEv_85469_VLETLGINKRKIVNQLSNSLTR_210"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	657 <PeptideEvidence dBSequence_ref="DBSeq93486" peptide_ref="Pep_VLETLGINKRKIVNQLSNSLTR" start="70" end="91" pre="Q" post="T" isDecoy="true" id="PepEv_93555_VLETLGINKRKIVNQLSNSLTR_70"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	658 <PeptideEvidence dBSequence_ref="DBSeq65480" peptide_ref="Pep_DPDNSIELE" start="874" end="882" pre="K" post="S" isDecoy="true" id="PepEv_66353_DPDNSIELE_874"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	659 <PeptideEvidence dBSequence_ref="DBSeq73091" peptide_ref="Pep_DPDNSIELE" start="804" end="812" pre="K" post="S" isDecoy="true" id="PepEv_73894_DPDNSIELE_804"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	660 <PeptideEvidence dBSequence_ref="DBSeq94489" peptide_ref="Pep_DPDNSIELE" start="804" end="812" pre="K" post="S" isDecoy="true" id="PepEv_95292_DPDNSIELE_804"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	661 <PeptideEvidence dBSequence_ref="DBSeq248" peptide_ref="Pep_LIIQLEQGDEPWR" start="77" end="89" pre="K" post="E" isDecoy="false" id="PepEv_324_LIIQLEQGDEPWR_77"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	662 <PeptideEvidence dBSequence_ref="DBSeq865" peptide_ref="Pep_LIIQLEQGDEPWR" start="77" end="89" pre="K" post="E" isDecoy="false" id="PepEv_941_LIIQLEQGDEPWR_77"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	663 <PeptideEvidence dBSequence_ref="DBSeq1482" peptide_ref="Pep_LIIQLEQGDEPWR" start="77" end="89" pre="K" post="E" isDecoy="false" id="PepEv_1558_LIIQLEQGDEPWR_77"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	664 <PeptideEvidence dBSequence_ref="DBSeq2099" peptide_ref="Pep_LIIQLEQGDEPWR" start="77" end="89" pre="K" post="E" isDecoy="false" id="PepEv_2175_LIIQLEQGDEPWR_77"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	665 <PeptideEvidence dBSequence_ref="DBSeq2715" peptide_ref="Pep_LIIQLEQGDEPWR" start="57" end="69" pre="K" post="E" isDecoy="false" id="PepEv_2771_LIIQLEQGDEPWR_57"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	666 <PeptideEvidence dBSequence_ref="DBSeq3312" peptide_ref="Pep_LIIQLEQGDEPWR" start="49" end="61" pre="K" post="E" isDecoy="false" id="PepEv_3360_LIIQLEQGDEPWR_49"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	667 <PeptideEvidence dBSequence_ref="DBSeq24004" peptide_ref="Pep_LIIQLEQGDEPWR" start="77" end="89" pre="K" post="E" isDecoy="false" id="PepEv_24080_LIIQLEQGDEPWR_77"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	668 <PeptideEvidence dBSequence_ref="DBSeq24621" peptide_ref="Pep_LIIQLEQGDEPWR" start="77" end="89" pre="K" post="E" isDecoy="false" id="PepEv_24697_LIIQLEQGDEPWR_77"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	669 <PeptideEvidence dBSequence_ref="DBSeq25238" peptide_ref="Pep_LIIQLEQGDEPWR" start="77" end="89" pre="K" post="E" isDecoy="false" id="PepEv_25314_LIIQLEQGDEPWR_77"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	670 <PeptideEvidence dBSequence_ref="DBSeq25855" peptide_ref="Pep_LIIQLEQGDEPWR" start="77" end="89" pre="K" post="E" isDecoy="false" id="PepEv_25931_LIIQLEQGDEPWR_77"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	671 <PeptideEvidence dBSequence_ref="DBSeq26471" peptide_ref="Pep_LIIQLEQGDEPWR" start="57" end="69" pre="K" post="E" isDecoy="false" id="PepEv_26527_LIIQLEQGDEPWR_57"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	672 <PeptideEvidence dBSequence_ref="DBSeq27068" peptide_ref="Pep_LIIQLEQGDEPWR" start="49" end="61" pre="K" post="E" isDecoy="false" id="PepEv_27116_LIIQLEQGDEPWR_49"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	673 <PeptideEvidence dBSequence_ref="DBSeq65480" peptide_ref="Pep_DPAPEGEIEMLDHAVK" start="3490" end="3505" pre="R" post="Q" isDecoy="true" id="PepEv_68969_DPAPEGEIEMLDHAVK_3490"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	674 <PeptideEvidence dBSequence_ref="DBSeq73091" peptide_ref="Pep_DPAPEGEIEMLDHAVK" start="3420" end="3435" pre="R" post="Q" isDecoy="true" id="PepEv_76510_DPAPEGEIEMLDHAVK_3420"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	675 <PeptideEvidence dBSequence_ref="DBSeq94489" peptide_ref="Pep_DPAPEGEIEMLDHAVK" start="3420" end="3435" pre="R" post="Q" isDecoy="true" id="PepEv_97908_DPAPEGEIEMLDHAVK_3420"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	676 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_EVMEHR" start="5763" end="5768" pre="K" post="L" isDecoy="false" id="PepEv_15267_EVMEHR_5763"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	677 <PeptideEvidence dBSequence_ref="DBSeq17116" peptide_ref="Pep_EVMEHR" start="3721" end="3726" pre="K" post="L" isDecoy="false" id="PepEv_20836_EVMEHR_3721"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	678 <PeptideEvidence dBSequence_ref="DBSeq38514" peptide_ref="Pep_EVMEHR" start="3645" end="3650" pre="K" post="L" isDecoy="false" id="PepEv_42158_EVMEHR_3645"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	679 <PeptideEvidence dBSequence_ref="DBSeq99912" peptide_ref="Pep_YNKCVDK" start="266" end="272" pre="Q" post="D" isDecoy="true" id="PepEv_100177_YNKCVDK_266"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	680 <PeptideEvidence dBSequence_ref="DBSeq56223" peptide_ref="Pep_GFGRGCER" start="333" end="340" pre="R" post="C" isDecoy="true" id="PepEv_56555_GFGRGCER_333"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	681 <PeptideEvidence dBSequence_ref="DBSeq56840" peptide_ref="Pep_GFGRGCER" start="333" end="340" pre="R" post="C" isDecoy="true" id="PepEv_57172_GFGRGCER_333"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	682 <PeptideEvidence dBSequence_ref="DBSeq57457" peptide_ref="Pep_GFGRGCER" start="333" end="340" pre="R" post="C" isDecoy="true" id="PepEv_57789_GFGRGCER_333"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	683 <PeptideEvidence dBSequence_ref="DBSeq58074" peptide_ref="Pep_GFGRGCER" start="333" end="340" pre="R" post="C" isDecoy="true" id="PepEv_58406_GFGRGCER_333"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	684 <PeptideEvidence dBSequence_ref="DBSeq58690" peptide_ref="Pep_GFGRGCER" start="333" end="340" pre="R" post="C" isDecoy="true" id="PepEv_59022_GFGRGCER_333"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	685 <PeptideEvidence dBSequence_ref="DBSeq59287" peptide_ref="Pep_GFGRGCER" start="333" end="340" pre="R" post="C" isDecoy="true" id="PepEv_59619_GFGRGCER_333"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	686 <PeptideEvidence dBSequence_ref="DBSeq79979" peptide_ref="Pep_GFGRGCER" start="333" end="340" pre="R" post="C" isDecoy="true" id="PepEv_80311_GFGRGCER_333"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	687 <PeptideEvidence dBSequence_ref="DBSeq80596" peptide_ref="Pep_GFGRGCER" start="333" end="340" pre="R" post="C" isDecoy="true" id="PepEv_80928_GFGRGCER_333"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	688 <PeptideEvidence dBSequence_ref="DBSeq81213" peptide_ref="Pep_GFGRGCER" start="333" end="340" pre="R" post="C" isDecoy="true" id="PepEv_81545_GFGRGCER_333"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	689 <PeptideEvidence dBSequence_ref="DBSeq81830" peptide_ref="Pep_GFGRGCER" start="333" end="340" pre="R" post="C" isDecoy="true" id="PepEv_82162_GFGRGCER_333"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	690 <PeptideEvidence dBSequence_ref="DBSeq82446" peptide_ref="Pep_GFGRGCER" start="333" end="340" pre="R" post="C" isDecoy="true" id="PepEv_82778_GFGRGCER_333"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	691 <PeptideEvidence dBSequence_ref="DBSeq83043" peptide_ref="Pep_GFGRGCER" start="333" end="340" pre="R" post="C" isDecoy="true" id="PepEv_83375_GFGRGCER_333"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	692 <PeptideEvidence dBSequence_ref="DBSeq23875" peptide_ref="Pep_QLAQKYNCDK" start="84" end="93" pre="R" post="M" isDecoy="false" id="PepEv_23958_QLAQKYNCDK_84"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	693 <PeptideEvidence dBSequence_ref="DBSeq46340" peptide_ref="Pep_QLAQKYNCDK" start="84" end="93" pre="R" post="M" isDecoy="false" id="PepEv_46423_QLAQKYNCDK_84"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	694 <PeptideEvidence dBSequence_ref="DBSeq43937" peptide_ref="Pep_DLGEEHF" start="37" end="43" pre="K" post="K" isDecoy="false" id="PepEv_43973_DLGEEHF_37"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	695 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_DLPFLSNEYK" start="3221" end="3230" pre="K" post="E" isDecoy="false" id="PepEv_12725_DLPFLSNEYK_3221"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	696 <PeptideEvidence dBSequence_ref="DBSeq65480" peptide_ref="Pep_DAHQKELVDQRYDK" start="1964" end="1977" pre="H" post="V" isDecoy="true" id="PepEv_67443_DAHQKELVDQRYDK_1964"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	697 <PeptideEvidence dBSequence_ref="DBSeq73091" peptide_ref="Pep_DAHQKELVDQRYDK" start="1894" end="1907" pre="H" post="V" isDecoy="true" id="PepEv_74984_DAHQKELVDQRYDK_1894"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	698 <PeptideEvidence dBSequence_ref="DBSeq94489" peptide_ref="Pep_DAHQKELVDQRYDK" start="1894" end="1907" pre="H" post="V" isDecoy="true" id="PepEv_96382_DAHQKELVDQRYDK_1894"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	699 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_QLQEELAEHQ" start="4089" end="4098" pre="K" post="V" isDecoy="false" id="PepEv_13593_QLQEELAEHQ_4089"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	700 <PeptideEvidence dBSequence_ref="DBSeq17116" peptide_ref="Pep_QLQEELAEHQ" start="2047" end="2056" pre="K" post="V" isDecoy="false" id="PepEv_19162_QLQEELAEHQ_2047"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	701 <PeptideEvidence dBSequence_ref="DBSeq38514" peptide_ref="Pep_QLQEELAEHQ" start="1971" end="1980" pre="K" post="V" isDecoy="false" id="PepEv_40484_QLQEELAEHQ_1971"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	702 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_DAENTVRGR" start="2533" end="2541" pre="R" post="L" isDecoy="false" id="PepEv_12037_DAENTVRGR_2533"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	703 <PeptideEvidence dBSequence_ref="DBSeq65480" peptide_ref="Pep_LNKDEVVTVDEAK" start="5375" end="5387" pre="L" post="E" isDecoy="true" id="PepEv_70854_LNKDEVVTVDEAK_5375"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	704 <PeptideEvidence dBSequence_ref="DBSeq8761" peptide_ref="Pep_LSETEMR" start="453" end="459" pre="Q" post="P" isDecoy="false" id="PepEv_9213_LSETEMR_453"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	705 <PeptideEvidence dBSequence_ref="DBSeq65480" peptide_ref="Pep_DELVCEDNK" start="6637" end="6645" pre="N" post="C" isDecoy="true" id="PepEv_72116_DELVCEDNK_6637"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	706 <PeptideEvidence dBSequence_ref="DBSeq73091" peptide_ref="Pep_DELVCEDNK" start="4527" end="4535" pre="N" post="C" isDecoy="true" id="PepEv_77617_DELVCEDNK_4527"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	707 <PeptideEvidence dBSequence_ref="DBSeq94489" peptide_ref="Pep_DELVCEDNK" start="4527" end="4535" pre="N" post="C" isDecoy="true" id="PepEv_99015_DELVCEDNK_4527"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	708 <PeptideEvidence dBSequence_ref="DBSeq79850" peptide_ref="Pep_CIMKDCNYKQ" start="33" end="42" pre="R" post="A" isDecoy="true" id="PepEv_79882_CIMKDCNYKQ_33"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	709 <PeptideEvidence dBSequence_ref="DBSeq102315" peptide_ref="Pep_CIMKDCNYKQ" start="33" end="42" pre="R" post="A" isDecoy="true" id="PepEv_102347_CIMKDCNYKQ_33"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	710 <PeptideEvidence dBSequence_ref="DBSeq99912" peptide_ref="Pep_ALDARDDACELLDGHCCEKHVK" start="324" end="345" pre="K" post="T" isDecoy="true" id="PepEv_100235_ALDARDDACELLDGHCCEKHVK_324"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	711 <PeptideEvidence dBSequence_ref="DBSeq94113" peptide_ref="Pep_FGYEEQSLGFSQK" start="212" end="224" pre="D" post="L" isDecoy="true" id="PepEv_94324_FGYEEQSLGFSQK_212"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	712 <PeptideEvidence dBSequence_ref="DBSeq105453" peptide_ref="Pep_FGYEEQSLGFSQK" start="213" end="225" pre="D" post="L" isDecoy="true" id="PepEv_105665_FGYEEQSLGFSQK_213"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	713 <PeptideEvidence dBSequence_ref="DBSeq63026" peptide_ref="Pep_AQQCVCCVWVK" start="745" end="755" pre="R" post="E" isDecoy="true" id="PepEv_63770_AQQCVCCVWVK_745"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	714 <PeptideEvidence dBSequence_ref="DBSeq63881" peptide_ref="Pep_AQQCVCCVWVK" start="745" end="755" pre="R" post="E" isDecoy="true" id="PepEv_64625_AQQCVCCVWVK_745"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	715 <PeptideEvidence dBSequence_ref="DBSeq91148" peptide_ref="Pep_AQQCVCCVWVK" start="745" end="755" pre="R" post="E" isDecoy="true" id="PepEv_91892_AQQCVCCVWVK_745"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	716 <PeptideEvidence dBSequence_ref="DBSeq92003" peptide_ref="Pep_AQQCVCCVWVK" start="745" end="755" pre="R" post="E" isDecoy="true" id="PepEv_92747_AQQCVCCVWVK_745"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	717 <PeptideEvidence dBSequence_ref="DBSeq103081" peptide_ref="Pep_FFNPDDE" start="492" end="498" pre="K" post="R" isDecoy="true" id="PepEv_103572_FFNPDDE_492"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	718 <PeptideEvidence dBSequence_ref="DBSeq27657" peptide_ref="Pep_HAAEEEIY" start="604" end="611" pre="R" post="T" isDecoy="false" id="PepEv_28260_HAAEEEIY_604"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	719 <PeptideEvidence dBSequence_ref="DBSeq28473" peptide_ref="Pep_HAAEEEIY" start="604" end="611" pre="R" post="T" isDecoy="false" id="PepEv_29076_HAAEEEIY_604"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	720 <PeptideEvidence dBSequence_ref="DBSeq29285" peptide_ref="Pep_HAAEEEIY" start="604" end="611" pre="R" post="T" isDecoy="false" id="PepEv_29888_HAAEEEIY_604"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	721 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_MPPLIPAEVDK" start="6068" end="6078" pre="R" post="I" isDecoy="false" id="PepEv_15572_MPPLIPAEVDK_6068"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	722 <PeptideEvidence dBSequence_ref="DBSeq17116" peptide_ref="Pep_MPPLIPAEVDK" start="4026" end="4036" pre="R" post="I" isDecoy="false" id="PepEv_21141_MPPLIPAEVDK_4026"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	723 <PeptideEvidence dBSequence_ref="DBSeq38514" peptide_ref="Pep_MPPLIPAEVDK" start="3950" end="3960" pre="R" post="I" isDecoy="false" id="PepEv_42463_MPPLIPAEVDK_3950"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	724 <PeptideEvidence dBSequence_ref="DBSeq65480" peptide_ref="Pep_ESRELWNEF" start="3666" end="3674" pre="K" post="E" isDecoy="true" id="PepEv_69145_ESRELWNEF_3666"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	725 <PeptideEvidence dBSequence_ref="DBSeq73091" peptide_ref="Pep_ESRELWNEF" start="3596" end="3604" pre="K" post="E" isDecoy="true" id="PepEv_76686_ESRELWNEF_3596"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	726 <PeptideEvidence dBSequence_ref="DBSeq94489" peptide_ref="Pep_ESRELWNEF" start="3596" end="3604" pre="K" post="E" isDecoy="true" id="PepEv_98084_ESRELWNEF_3596"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	727 <PeptideEvidence dBSequence_ref="DBSeq30052" peptide_ref="Pep_YYKVDE" start="105" end="110" pre="K" post="N" isDecoy="false" id="PepEv_30156_YYKVDE_105"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	728 <PeptideEvidence dBSequence_ref="DBSeq44851" peptide_ref="Pep_YYKVDE" start="105" end="110" pre="K" post="N" isDecoy="false" id="PepEv_44955_YYKVDE_105"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	729 <PeptideEvidence dBSequence_ref="DBSeq8761" peptide_ref="Pep_MMSASSYNE" start="472" end="480" pre="R" post="D" isDecoy="false" id="PepEv_9232_MMSASSYNE_472"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	730 <PeptideEvidence dBSequence_ref="DBSeq65480" peptide_ref="Pep_LMHDPSR" start="6666" end="6672" pre="K" post="P" isDecoy="true" id="PepEv_72145_LMHDPSR_6666"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	731 <PeptideEvidence dBSequence_ref="DBSeq73091" peptide_ref="Pep_LMHDPSR" start="4556" end="4562" pre="K" post="P" isDecoy="true" id="PepEv_77646_LMHDPSR_4556"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	732 <PeptideEvidence dBSequence_ref="DBSeq94489" peptide_ref="Pep_LMHDPSR" start="4556" end="4562" pre="K" post="P" isDecoy="true" id="PepEv_99044_LMHDPSR_4556"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	733 <PeptideEvidence dBSequence_ref="DBSeq65480" peptide_ref="Pep_YDGLVEQ" start="6253" end="6259" pre="R" post="I" isDecoy="true" id="PepEv_71732_YDGLVEQ_6253"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	734 <PeptideEvidence dBSequence_ref="DBSeq73091" peptide_ref="Pep_YDGLVEQ" start="4143" end="4149" pre="R" post="I" isDecoy="true" id="PepEv_77233_YDGLVEQ_4143"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	735 <PeptideEvidence dBSequence_ref="DBSeq94489" peptide_ref="Pep_YDGLVEQ" start="4143" end="4149" pre="R" post="I" isDecoy="true" id="PepEv_98631_YDGLVEQ_4143"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	736 <PeptideEvidence dBSequence_ref="DBSeq105830" peptide_ref="Pep_RCYPER" start="15" end="20" pre="D" post="Q" isDecoy="true" id="PepEv_105844_RCYPER_15"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	737 <PeptideEvidence dBSequence_ref="DBSeq106550" peptide_ref="Pep_RCYPER" start="15" end="20" pre="D" post="Q" isDecoy="true" id="PepEv_106564_RCYPER_15"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	738 <PeptideEvidence dBSequence_ref="DBSeq110897" peptide_ref="Pep_RCYPER" start="15" end="20" pre="D" post="Q" isDecoy="true" id="PepEv_110911_RCYPER_15"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	739 <PeptideEvidence dBSequence_ref="DBSeq7051" peptide_ref="Pep_ARGCSEELS" start="525" end="533" pre="R" post="K" isDecoy="false" id="PepEv_7575_ARGCSEELS_525"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	740 <PeptideEvidence dBSequence_ref="DBSeq7906" peptide_ref="Pep_ARGCSEELS" start="525" end="533" pre="R" post="K" isDecoy="false" id="PepEv_8430_ARGCSEELS_525"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	741 <PeptideEvidence dBSequence_ref="DBSeq35173" peptide_ref="Pep_ARGCSEELS" start="525" end="533" pre="R" post="K" isDecoy="false" id="PepEv_35697_ARGCSEELS_525"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	742 <PeptideEvidence dBSequence_ref="DBSeq36028" peptide_ref="Pep_ARGCSEELS" start="525" end="533" pre="R" post="K" isDecoy="false" id="PepEv_36552_ARGCSEELS_525"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	743 <PeptideEvidence dBSequence_ref="DBSeq60575" peptide_ref="Pep_AMFEELSSLK" start="945" end="954" pre="A" post="G" isDecoy="true" id="PepEv_61519_AMFEELSSLK_945"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	744 <PeptideEvidence dBSequence_ref="DBSeq61828" peptide_ref="Pep_AMFEELSSLK" start="944" end="953" pre="A" post="G" isDecoy="true" id="PepEv_62771_AMFEELSSLK_944"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	745 <PeptideEvidence dBSequence_ref="DBSeq89848" peptide_ref="Pep_AMFEELSSLK" start="945" end="954" pre="A" post="G" isDecoy="true" id="PepEv_90792_AMFEELSSLK_945"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	746 <PeptideEvidence dBSequence_ref="DBSeq36883" peptide_ref="Pep_LIRRQRLRPR" start="13" end="22" pre="K" post="E" isDecoy="false" id="PepEv_36895_LIRRQRLRPR_13"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	747 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_CDDQNKR" start="2931" end="2937" pre="E" post="S" isDecoy="false" id="PepEv_12435_CDDQNKR_2931"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	748 <PeptideEvidence dBSequence_ref="DBSeq43937" peptide_ref="Pep_EACFAVEGP" start="588" end="596" pre="K" post="K" isDecoy="false" id="PepEv_44524_EACFAVEGP_588"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	749 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_SKEVSNLEFSDR" start="3254" end="3265" pre="G" post="K" isDecoy="false" id="PepEv_12758_SKEVSNLEFSDR_3254"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	750 <PeptideEvidence dBSequence_ref="DBSeq63026" peptide_ref="Pep_EKTGNTSSDQ" start="20" end="29" pre="R" post="L" isDecoy="true" id="PepEv_63045_EKTGNTSSDQ_20"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	751 <PeptideEvidence dBSequence_ref="DBSeq63881" peptide_ref="Pep_EKTGNTSSDQ" start="20" end="29" pre="R" post="L" isDecoy="true" id="PepEv_63900_EKTGNTSSDQ_20"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	752 <PeptideEvidence dBSequence_ref="DBSeq91148" peptide_ref="Pep_EKTGNTSSDQ" start="20" end="29" pre="R" post="L" isDecoy="true" id="PepEv_91167_EKTGNTSSDQ_20"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	753 <PeptideEvidence dBSequence_ref="DBSeq92003" peptide_ref="Pep_EKTGNTSSDQ" start="20" end="29" pre="R" post="L" isDecoy="true" id="PepEv_92022_EKTGNTSSDQ_20"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	754 <PeptideEvidence dBSequence_ref="DBSeq105830" peptide_ref="Pep_WGLDMERAGGQK" start="408" end="419" pre="K" post="T" isDecoy="true" id="PepEv_106237_WGLDMERAGGQK_408"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	755 <PeptideEvidence dBSequence_ref="DBSeq106550" peptide_ref="Pep_WGLDMERAGGQK" start="408" end="419" pre="K" post="T" isDecoy="true" id="PepEv_106957_WGLDMERAGGQK_408"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	756 <PeptideEvidence dBSequence_ref="DBSeq110897" peptide_ref="Pep_WGLDMERAGGQK" start="408" end="419" pre="K" post="T" isDecoy="true" id="PepEv_111304_WGLDMERAGGQK_408"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	757 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_EGQMVEEKYQK" start="6006" end="6016" pre="E" post="A" isDecoy="false" id="PepEv_15510_EGQMVEEKYQK_6006"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	758 <PeptideEvidence dBSequence_ref="DBSeq17116" peptide_ref="Pep_EGQMVEEKYQK" start="3964" end="3974" pre="E" post="A" isDecoy="false" id="PepEv_21079_EGQMVEEKYQK_3964"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	759 <PeptideEvidence dBSequence_ref="DBSeq38514" peptide_ref="Pep_EGQMVEEKYQK" start="3888" end="3898" pre="E" post="A" isDecoy="false" id="PepEv_42401_EGQMVEEKYQK_3888"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	760 <PeptideEvidence dBSequence_ref="DBSeq104353" peptide_ref="Pep_NTPDVMMSDTEK" start="801" end="812" pre="D" post="L" isDecoy="true" id="PepEv_105153_NTPDVMMSDTEK_801"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	761 <PeptideEvidence dBSequence_ref="DBSeq107227" peptide_ref="Pep_NTPDVMMSDTEK" start="801" end="812" pre="D" post="L" isDecoy="true" id="PepEv_108027_NTPDVMMSDTEK_801"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	762 <PeptideEvidence dBSequence_ref="DBSeq108359" peptide_ref="Pep_NTPDVMMSDTEK" start="801" end="812" pre="D" post="L" isDecoy="true" id="PepEv_109159_NTPDVMMSDTEK_801"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	763 <PeptideEvidence dBSequence_ref="DBSeq109459" peptide_ref="Pep_NTPDVMMSDTEK" start="801" end="812" pre="D" post="L" isDecoy="true" id="PepEv_110259_NTPDVMMSDTEK_801"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	764 <PeptideEvidence dBSequence_ref="DBSeq99912" peptide_ref="Pep_KECGAHSEDAVCTK" start="520" end="533" pre="S" post="A" isDecoy="true" id="PepEv_100431_KECGAHSEDAVCTK_520"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	765 <PeptideEvidence dBSequence_ref="DBSeq103081" peptide_ref="Pep_PDIGDPNWISGDSE" start="214" end="227" pre="K" post="G" isDecoy="true" id="PepEv_103294_PDIGDPNWISGDSE_214"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	766 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_ELNPEEGQMVEEKYQ" start="6001" end="6015" pre="K" post="K" isDecoy="false" id="PepEv_15505_ELNPEEGQMVEEKYQ_6001"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	767 <PeptideEvidence dBSequence_ref="DBSeq17116" peptide_ref="Pep_ELNPEEGQMVEEKYQ" start="3959" end="3973" pre="K" post="K" isDecoy="false" id="PepEv_21074_ELNPEEGQMVEEKYQ_3959"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	768 <PeptideEvidence dBSequence_ref="DBSeq38514" peptide_ref="Pep_ELNPEEGQMVEEKYQ" start="3883" end="3897" pre="K" post="K" isDecoy="false" id="PepEv_42396_ELNPEEGQMVEEKYQ_3883"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	769 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_NQDALTFFNSNQVS" start="3135" end="3148" pre="R" post="E" isDecoy="false" id="PepEv_12639_NQDALTFFNSNQVS_3135"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	770 <PeptideEvidence dBSequence_ref="DBSeq103081" peptide_ref="Pep_DERDAAAESYHR" start="497" end="508" pre="D" post="R" isDecoy="true" id="PepEv_103577_DERDAAAESYHR_497"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	771 <PeptideEvidence dBSequence_ref="DBSeq48378" peptide_ref="Pep_NCNGSAACGLGYDFSR" start="454" end="469" pre="M" post="C" isDecoy="false" id="PepEv_48831_NCNGSAACGLGYDFSR_454"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	772 <PeptideEvidence dBSequence_ref="DBSeq51252" peptide_ref="Pep_NCNGSAACGLGYDFSR" start="486" end="501" pre="M" post="C" isDecoy="false" id="PepEv_51737_NCNGSAACGLGYDFSR_486"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	773 <PeptideEvidence dBSequence_ref="DBSeq52384" peptide_ref="Pep_NCNGSAACGLGYDFSR" start="454" end="469" pre="M" post="C" isDecoy="false" id="PepEv_52837_NCNGSAACGLGYDFSR_454"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	774 <PeptideEvidence dBSequence_ref="DBSeq53484" peptide_ref="Pep_NCNGSAACGLGYDFSR" start="454" end="469" pre="M" post="C" isDecoy="false" id="PepEv_53937_NCNGSAACGLGYDFSR_454"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	775 <PeptideEvidence dBSequence_ref="DBSeq38138" peptide_ref="Pep_QSFGLSQEEYGFDGA" start="153" end="167" pre="K" post="P" isDecoy="false" id="PepEv_38290_QSFGLSQEEYGFDGA_153"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	776 <PeptideEvidence dBSequence_ref="DBSeq49478" peptide_ref="Pep_QSFGLSQEEYGFDGA" start="153" end="167" pre="K" post="P" isDecoy="false" id="PepEv_49630_QSFGLSQEEYGFDGA_153"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	777 <PeptideEvidence dBSequence_ref="DBSeq60575" peptide_ref="Pep_THKMYEAD" start="106" end="113" pre="R" post="D" isDecoy="true" id="PepEv_60680_THKMYEAD_106"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	778 <PeptideEvidence dBSequence_ref="DBSeq61828" peptide_ref="Pep_THKMYEAD" start="106" end="113" pre="R" post="D" isDecoy="true" id="PepEv_61933_THKMYEAD_106"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	779 <PeptideEvidence dBSequence_ref="DBSeq89848" peptide_ref="Pep_THKMYEAD" start="106" end="113" pre="R" post="D" isDecoy="true" id="PepEv_89953_THKMYEAD_106"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	780 <PeptideEvidence dBSequence_ref="DBSeq7051" peptide_ref="Pep_AEDEPEWPQ" start="256" end="264" pre="R" post="P" isDecoy="false" id="PepEv_7306_AEDEPEWPQ_256"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	781 <PeptideEvidence dBSequence_ref="DBSeq7906" peptide_ref="Pep_AEDEPEWPQ" start="256" end="264" pre="R" post="P" isDecoy="false" id="PepEv_8161_AEDEPEWPQ_256"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	782 <PeptideEvidence dBSequence_ref="DBSeq35173" peptide_ref="Pep_AEDEPEWPQ" start="256" end="264" pre="R" post="P" isDecoy="false" id="PepEv_35428_AEDEPEWPQ_256"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	783 <PeptideEvidence dBSequence_ref="DBSeq36028" peptide_ref="Pep_AEDEPEWPQ" start="256" end="264" pre="R" post="P" isDecoy="false" id="PepEv_36283_AEDEPEWPQ_256"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	784 <PeptideEvidence dBSequence_ref="DBSeq65480" peptide_ref="Pep_TEGPTYETER" start="5338" end="5347" pre="G" post="T" isDecoy="true" id="PepEv_70817_TEGPTYETER_5338"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	785 <PeptideEvidence dBSequence_ref="DBSeq65480" peptide_ref="Pep_ASINPNNDSWDYALEE" start="6818" end="6833" pre="K" post="E" isDecoy="true" id="PepEv_72297_ASINPNNDSWDYALEE_6818"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	786 <PeptideEvidence dBSequence_ref="DBSeq73091" peptide_ref="Pep_ASINPNNDSWDYALEE" start="4706" end="4721" pre="K" post="E" isDecoy="true" id="PepEv_77796_ASINPNNDSWDYALEE_4706"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	787 <PeptideEvidence dBSequence_ref="DBSeq94489" peptide_ref="Pep_ASINPNNDSWDYALEE" start="4706" end="4721" pre="K" post="E" isDecoy="true" id="PepEv_99194_ASINPNNDSWDYALEE_4706"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	788 <PeptideEvidence dBSequence_ref="DBSeq4600" peptide_ref="Pep_KQEESAEAGAPG" start="443" end="454" pre="R" post="G" isDecoy="false" id="PepEv_5042_KQEESAEAGAPG_443"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	789 <PeptideEvidence dBSequence_ref="DBSeq5853" peptide_ref="Pep_KQEESAEAGAPG" start="388" end="399" pre="R" post="G" isDecoy="false" id="PepEv_6240_KQEESAEAGAPG_388"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	790 <PeptideEvidence dBSequence_ref="DBSeq33873" peptide_ref="Pep_KQEESAEAGAPG" start="490" end="501" pre="R" post="G" isDecoy="false" id="PepEv_34362_KQEESAEAGAPG_490"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	791 <PeptideEvidence dBSequence_ref="DBSeq248" peptide_ref="Pep_PFVCLECGR" start="385" end="393" pre="R" post="G" isDecoy="false" id="PepEv_632_PFVCLECGR_385"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	792 <PeptideEvidence dBSequence_ref="DBSeq865" peptide_ref="Pep_PFVCLECGR" start="385" end="393" pre="R" post="G" isDecoy="false" id="PepEv_1249_PFVCLECGR_385"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	793 <PeptideEvidence dBSequence_ref="DBSeq1482" peptide_ref="Pep_PFVCLECGR" start="385" end="393" pre="R" post="G" isDecoy="false" id="PepEv_1866_PFVCLECGR_385"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	794 <PeptideEvidence dBSequence_ref="DBSeq2099" peptide_ref="Pep_PFVCLECGR" start="384" end="392" pre="R" post="G" isDecoy="false" id="PepEv_2482_PFVCLECGR_384"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	795 <PeptideEvidence dBSequence_ref="DBSeq2715" peptide_ref="Pep_PFVCLECGR" start="365" end="373" pre="R" post="G" isDecoy="false" id="PepEv_3079_PFVCLECGR_365"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	796 <PeptideEvidence dBSequence_ref="DBSeq3312" peptide_ref="Pep_PFVCLECGR" start="357" end="365" pre="R" post="G" isDecoy="false" id="PepEv_3668_PFVCLECGR_357"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	797 <PeptideEvidence dBSequence_ref="DBSeq24004" peptide_ref="Pep_PFVCLECGR" start="385" end="393" pre="R" post="G" isDecoy="false" id="PepEv_24388_PFVCLECGR_385"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	798 <PeptideEvidence dBSequence_ref="DBSeq24621" peptide_ref="Pep_PFVCLECGR" start="385" end="393" pre="R" post="G" isDecoy="false" id="PepEv_25005_PFVCLECGR_385"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	799 <PeptideEvidence dBSequence_ref="DBSeq25238" peptide_ref="Pep_PFVCLECGR" start="385" end="393" pre="R" post="G" isDecoy="false" id="PepEv_25622_PFVCLECGR_385"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	800 <PeptideEvidence dBSequence_ref="DBSeq25855" peptide_ref="Pep_PFVCLECGR" start="384" end="392" pre="R" post="G" isDecoy="false" id="PepEv_26238_PFVCLECGR_384"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	801 <PeptideEvidence dBSequence_ref="DBSeq26471" peptide_ref="Pep_PFVCLECGR" start="365" end="373" pre="R" post="G" isDecoy="false" id="PepEv_26835_PFVCLECGR_365"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	802 <PeptideEvidence dBSequence_ref="DBSeq27068" peptide_ref="Pep_PFVCLECGR" start="357" end="365" pre="R" post="G" isDecoy="false" id="PepEv_27424_PFVCLECGR_357"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	803 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_ENLEQAFE" start="329" end="336" pre="R" post="V" isDecoy="false" id="PepEv_9833_ENLEQAFE_329"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	804 <PeptideEvidence dBSequence_ref="DBSeq17116" peptide_ref="Pep_ENLEQAFE" start="329" end="336" pre="R" post="V" isDecoy="false" id="PepEv_17444_ENLEQAFE_329"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	805 <PeptideEvidence dBSequence_ref="DBSeq38514" peptide_ref="Pep_ENLEQAFE" start="253" end="260" pre="R" post="V" isDecoy="false" id="PepEv_38766_ENLEQAFE_253"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	806 <PeptideEvidence dBSequence_ref="DBSeq63026" peptide_ref="Pep_WDFDEES" start="454" end="460" pre="R" post="D" isDecoy="true" id="PepEv_63479_WDFDEES_454"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	807 <PeptideEvidence dBSequence_ref="DBSeq63881" peptide_ref="Pep_WDFDEES" start="454" end="460" pre="R" post="D" isDecoy="true" id="PepEv_64334_WDFDEES_454"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	808 <PeptideEvidence dBSequence_ref="DBSeq91148" peptide_ref="Pep_WDFDEES" start="454" end="460" pre="R" post="D" isDecoy="true" id="PepEv_91601_WDFDEES_454"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	809 <PeptideEvidence dBSequence_ref="DBSeq92003" peptide_ref="Pep_WDFDEES" start="454" end="460" pre="R" post="D" isDecoy="true" id="PepEv_92456_WDFDEES_454"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	810 <PeptideEvidence dBSequence_ref="DBSeq30052" peptide_ref="Pep_HYCGKCCL" start="139" end="146" pre="R" post="T" isDecoy="false" id="PepEv_30190_HYCGKCCL_139"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	811 <PeptideEvidence dBSequence_ref="DBSeq44851" peptide_ref="Pep_HYCGKCCL" start="139" end="146" pre="R" post="T" isDecoy="false" id="PepEv_44989_HYCGKCCL_139"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	812 <PeptideEvidence dBSequence_ref="DBSeq105830" peptide_ref="Pep_PPGAQGAEGGGSAEG" start="372" end="386" pre="K" post="G" isDecoy="true" id="PepEv_106201_PPGAQGAEGGGSAEG_372"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	813 <PeptideEvidence dBSequence_ref="DBSeq106550" peptide_ref="Pep_PPGAQGAEGGGSAEG" start="372" end="386" pre="K" post="G" isDecoy="true" id="PepEv_106921_PPGAQGAEGGGSAEG_372"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	814 <PeptideEvidence dBSequence_ref="DBSeq110897" peptide_ref="Pep_PPGAQGAEGGGSAEG" start="372" end="386" pre="K" post="G" isDecoy="true" id="PepEv_111268_PPGAQGAEGGGSAEG_372"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	815 <PeptideEvidence dBSequence_ref="DBSeq65480" peptide_ref="Pep_NQQPSLDQAHES" start="3992" end="4003" pre="R" post="I" isDecoy="true" id="PepEv_69471_NQQPSLDQAHES_3992"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	816 <PeptideEvidence dBSequence_ref="DBSeq83632" peptide_ref="Pep_EGDYVSR" start="772" end="778" pre="E" post="L" isDecoy="true" id="PepEv_84403_EGDYVSR_772"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	817 <PeptideEvidence dBSequence_ref="DBSeq84448" peptide_ref="Pep_EGDYVSR" start="768" end="774" pre="E" post="L" isDecoy="true" id="PepEv_85215_EGDYVSR_768"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	818 <PeptideEvidence dBSequence_ref="DBSeq85260" peptide_ref="Pep_EGDYVSR" start="723" end="729" pre="E" post="L" isDecoy="true" id="PepEv_85982_EGDYVSR_723"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	819 <PeptideEvidence dBSequence_ref="DBSeq93486" peptide_ref="Pep_EGDYVSR" start="583" end="589" pre="E" post="L" isDecoy="true" id="PepEv_94068_EGDYVSR_583"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	820 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_EEDASSCQEQ" start="4362" end="4371" pre="R" post="L" isDecoy="false" id="PepEv_13866_EEDASSCQEQ_4362"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	821 <PeptideEvidence dBSequence_ref="DBSeq17116" peptide_ref="Pep_EEDASSCQEQ" start="2320" end="2329" pre="R" post="L" isDecoy="false" id="PepEv_19435_EEDASSCQEQ_2320"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	822 <PeptideEvidence dBSequence_ref="DBSeq38514" peptide_ref="Pep_EEDASSCQEQ" start="2244" end="2253" pre="R" post="L" isDecoy="false" id="PepEv_40757_EEDASSCQEQ_2244"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	823 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_DENYYQ" start="572" end="577" pre="R" post="L" isDecoy="false" id="PepEv_10076_DENYYQ_572"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	824 <PeptideEvidence dBSequence_ref="DBSeq17116" peptide_ref="Pep_DENYYQ" start="572" end="577" pre="R" post="L" isDecoy="false" id="PepEv_17687_DENYYQ_572"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	825 <PeptideEvidence dBSequence_ref="DBSeq38514" peptide_ref="Pep_DENYYQ" start="496" end="501" pre="R" post="L" isDecoy="false" id="PepEv_39009_DENYYQ_496"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	826 <PeptideEvidence dBSequence_ref="DBSeq65480" peptide_ref="Pep_ESEGKGCSMEAPQ" start="4717" end="4729" pre="K" post="S" isDecoy="true" id="PepEv_70196_ESEGKGCSMEAPQ_4717"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	827 <PeptideEvidence dBSequence_ref="DBSeq99912" peptide_ref="Pep_GEVAFCAEKDDAACCK" start="13" end="28" pre="P" post="D" isDecoy="true" id="PepEv_99924_GEVAFCAEKDDAACCK_13"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	828 <PeptideEvidence dBSequence_ref="DBSeq27657" peptide_ref="Pep_MCNFHYQG" start="67" end="74" pre="K" post="F" isDecoy="false" id="PepEv_27723_MCNFHYQG_67"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	829 <PeptideEvidence dBSequence_ref="DBSeq28473" peptide_ref="Pep_MCNFHYQG" start="67" end="74" pre="K" post="F" isDecoy="false" id="PepEv_28539_MCNFHYQG_67"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	830 <PeptideEvidence dBSequence_ref="DBSeq29285" peptide_ref="Pep_MCNFHYQG" start="67" end="74" pre="K" post="F" isDecoy="false" id="PepEv_29351_MCNFHYQG_67"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	831 <PeptideEvidence dBSequence_ref="DBSeq37511" peptide_ref="Pep_MCNFHYQG" start="67" end="74" pre="K" post="F" isDecoy="false" id="PepEv_37577_MCNFHYQG_67"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	832 <PeptideEvidence dBSequence_ref="DBSeq105830" peptide_ref="Pep_HGRDWF" start="206" end="211" pre="R" post="Y" isDecoy="true" id="PepEv_106035_HGRDWF_206"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	833 <PeptideEvidence dBSequence_ref="DBSeq106550" peptide_ref="Pep_HGRDWF" start="206" end="211" pre="R" post="Y" isDecoy="true" id="PepEv_106755_HGRDWF_206"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	834 <PeptideEvidence dBSequence_ref="DBSeq110897" peptide_ref="Pep_HGRDWF" start="206" end="211" pre="R" post="Y" isDecoy="true" id="PepEv_111102_HGRDWF_206"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	835 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_EDLVPWIEDCK" start="4961" end="4971" pre="V" post="A" isDecoy="false" id="PepEv_14465_EDLVPWIEDCK_4961"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	836 <PeptideEvidence dBSequence_ref="DBSeq17116" peptide_ref="Pep_EDLVPWIEDCK" start="2919" end="2929" pre="V" post="A" isDecoy="false" id="PepEv_20034_EDLVPWIEDCK_2919"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	837 <PeptideEvidence dBSequence_ref="DBSeq38514" peptide_ref="Pep_EDLVPWIEDCK" start="2843" end="2853" pre="V" post="A" isDecoy="false" id="PepEv_41356_EDLVPWIEDCK_2843"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	838 <PeptideEvidence dBSequence_ref="DBSeq87068" peptide_ref="Pep_MGHDRCR" start="150" end="156" pre="P" post="Q" isDecoy="true" id="PepEv_87217_MGHDRCR_150"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	839 <PeptideEvidence dBSequence_ref="DBSeq87837" peptide_ref="Pep_MGHDRCR" start="150" end="156" pre="P" post="Q" isDecoy="true" id="PepEv_87986_MGHDRCR_150"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	840 <PeptideEvidence dBSequence_ref="DBSeq88550" peptide_ref="Pep_MGHDRCR" start="150" end="156" pre="P" post="Q" isDecoy="true" id="PepEv_88699_MGHDRCR_150"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	841 <PeptideEvidence dBSequence_ref="DBSeq103640" peptide_ref="Pep_MGHDRCR" start="150" end="156" pre="P" post="Q" isDecoy="true" id="PepEv_103789_MGHDRCR_150"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	842 <PeptideEvidence dBSequence_ref="DBSeq60575" peptide_ref="Pep_EEEKEEEE" start="315" end="322" pre="K" post="Y" isDecoy="true" id="PepEv_60889_EEEKEEEE_315"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	843 <PeptideEvidence dBSequence_ref="DBSeq61828" peptide_ref="Pep_EEEKEEEE" start="315" end="322" pre="K" post="Y" isDecoy="true" id="PepEv_62142_EEEKEEEE_315"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	844 <PeptideEvidence dBSequence_ref="DBSeq89848" peptide_ref="Pep_EEEKEEEE" start="315" end="322" pre="K" post="Y" isDecoy="true" id="PepEv_90162_EEEKEEEE_315"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	845 <PeptideEvidence dBSequence_ref="DBSeq63026" peptide_ref="Pep_TGNTSSDQ" start="22" end="29" pre="K" post="L" isDecoy="true" id="PepEv_63047_TGNTSSDQ_22"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	846 <PeptideEvidence dBSequence_ref="DBSeq63881" peptide_ref="Pep_TGNTSSDQ" start="22" end="29" pre="K" post="L" isDecoy="true" id="PepEv_63902_TGNTSSDQ_22"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	847 <PeptideEvidence dBSequence_ref="DBSeq91148" peptide_ref="Pep_TGNTSSDQ" start="22" end="29" pre="K" post="L" isDecoy="true" id="PepEv_91169_TGNTSSDQ_22"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	848 <PeptideEvidence dBSequence_ref="DBSeq92003" peptide_ref="Pep_TGNTSSDQ" start="22" end="29" pre="K" post="L" isDecoy="true" id="PepEv_92024_TGNTSSDQ_22"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	849 <PeptideEvidence dBSequence_ref="DBSeq23875" peptide_ref="Pep_YNCDKMIC" start="89" end="96" pre="K" post="R" isDecoy="false" id="PepEv_23963_YNCDKMIC_89"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	850 <PeptideEvidence dBSequence_ref="DBSeq46340" peptide_ref="Pep_YNCDKMIC" start="89" end="96" pre="K" post="R" isDecoy="false" id="PepEv_46428_YNCDKMIC_89"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	851 <PeptideEvidence dBSequence_ref="DBSeq7051" peptide_ref="Pep_CGDCKFNVC" start="81" end="89" pre="R" post="K" isDecoy="false" id="PepEv_7131_CGDCKFNVC_81"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	852 <PeptideEvidence dBSequence_ref="DBSeq7906" peptide_ref="Pep_CGDCKFNVC" start="81" end="89" pre="R" post="K" isDecoy="false" id="PepEv_7986_CGDCKFNVC_81"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	853 <PeptideEvidence dBSequence_ref="DBSeq35173" peptide_ref="Pep_CGDCKFNVC" start="81" end="89" pre="R" post="K" isDecoy="false" id="PepEv_35253_CGDCKFNVC_81"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	854 <PeptideEvidence dBSequence_ref="DBSeq36028" peptide_ref="Pep_CGDCKFNVC" start="81" end="89" pre="R" post="K" isDecoy="false" id="PepEv_36108_CGDCKFNVC_81"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	855 <PeptideEvidence dBSequence_ref="DBSeq78837" peptide_ref="Pep_PRALAVAVLCTLILL" start="197" end="211" pre="K" post="K" isDecoy="true" id="PepEv_79033_PRALAVAVLCTLILL_197"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	856 <PeptideEvidence dBSequence_ref="DBSeq79051" peptide_ref="Pep_PRALAVAVLCTLILL" start="190" end="204" pre="K" post="K" isDecoy="true" id="PepEv_79240_PRALAVAVLCTLILL_190"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	857 <PeptideEvidence dBSequence_ref="DBSeq79258" peptide_ref="Pep_PRALAVAVLCTLILL" start="190" end="204" pre="K" post="K" isDecoy="true" id="PepEv_79447_PRALAVAVLCTLILL_190"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	858 <PeptideEvidence dBSequence_ref="DBSeq79465" peptide_ref="Pep_PRALAVAVLCTLILL" start="190" end="204" pre="K" post="K" isDecoy="true" id="PepEv_79654_PRALAVAVLCTLILL_190"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	859 <PeptideEvidence dBSequence_ref="DBSeq79672" peptide_ref="Pep_PRALAVAVLCTLILL" start="161" end="175" pre="K" post="K" isDecoy="true" id="PepEv_79832_PRALAVAVLCTLILL_161"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	860 <PeptideEvidence dBSequence_ref="DBSeq100983" peptide_ref="Pep_PRALAVAVLCTLILL" start="198" end="212" pre="K" post="K" isDecoy="true" id="PepEv_101180_PRALAVAVLCTLILL_198"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	861 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_CTNFSSCWSDGKM" start="292" end="304" pre="K" post="F" isDecoy="false" id="PepEv_9796_CTNFSSCWSDGKM_292"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	862 <PeptideEvidence dBSequence_ref="DBSeq17116" peptide_ref="Pep_CTNFSSCWSDGKM" start="292" end="304" pre="K" post="F" isDecoy="false" id="PepEv_17407_CTNFSSCWSDGKM_292"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	863 <PeptideEvidence dBSequence_ref="DBSeq38514" peptide_ref="Pep_CTNFSSCWSDGKM" start="216" end="228" pre="K" post="F" isDecoy="false" id="PepEv_38729_CTNFSSCWSDGKM_216"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	864 </SequenceCollection>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	865 <AnalysisCollection xmlns="http://psidev.info/psi/pi/mzIdentML/1.1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	866 <SpectrumIdentification spectrumIdentificationProtocol_ref="SearchProtocol_1" spectrumIdentificationList_ref="SI_LIST_1" id="SpecIdent_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	867 <InputSpectra spectraData_ref="SID_1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	868 <SearchDatabaseRef searchDatabase_ref="SearchDB_1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	869 </SpectrumIdentification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	870 </AnalysisCollection>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	871 <AnalysisProtocolCollection xmlns="http://psidev.info/psi/pi/mzIdentML/1.1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	872 <SpectrumIdentificationProtocol analysisSoftware_ref="ID_software" id="SearchProtocol_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	873 <SearchType>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	874 <cvParam cvRef="PSI-MS" accession="MS:1001083" name="ms-ms search"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	875 </SearchType>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	876 <AdditionalSearchParams>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	877 <cvParam cvRef="PSI-MS" accession="MS:1001211" name="parent mass type mono"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	878 <cvParam cvRef="PSI-MS" accession="MS:1001256" name="fragment mass type mono"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	879 <userParam name="TargetDecoyApproach" value="true"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	880 <userParam name="MinIsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	881 <userParam name="MaxIsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	882 <userParam name="FragmentMethod" value="As written in the spectrum or CID if no info"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	883 <userParam name="Instrument" value="LowRes"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	884 <userParam name="Protocol" value="Standard"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	885 <userParam name="NumTolerableTermini" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	886 <userParam name="NumMatchesPerSpec" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	887 <userParam name="MaxNumModifications" value="2"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	888 <userParam name="MinPepLength" value="6"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	889 <userParam name="MaxPepLength" value="40"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	890 <userParam name="MinCharge" value="2"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	891 <userParam name="MaxCharge" value="3"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	892 <userParam name="ChargeCarrierMass" value="1.00727649"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	893 </AdditionalSearchParams>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	894 <ModificationParams/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	895 <Enzymes>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	896 <Enzyme semiSpecific="true" missedCleavages="1000" id="Tryp">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	897 <EnzymeName>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	898 <cvParam cvRef="PSI-MS" accession="MS:1001251" name="Trypsin"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	899 </EnzymeName>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	900 </Enzyme>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	901 </Enzymes>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	902 <ParentTolerance>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	903 <cvParam cvRef="PSI-MS" accession="MS:1001412" name="search tolerance plus value" value="50.0" unitAccession="UO:0000169" unitName="parts per million" unitCvRef="UO"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	904 <cvParam cvRef="PSI-MS" accession="MS:1001413" name="search tolerance minus value" value="50.0" unitAccession="UO:0000169" unitName="parts per million" unitCvRef="UO"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	905 </ParentTolerance>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	906 <Threshold>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	907 <cvParam cvRef="PSI-MS" accession="MS:1001494" name="no threshold"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	908 </Threshold>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	909 </SpectrumIdentificationProtocol>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	910 </AnalysisProtocolCollection>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	911 <DataCollection xmlns="http://psidev.info/psi/pi/mzIdentML/1.1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	912 <Inputs>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	913 <SearchDatabase numDatabaseSequences="144" location="/private/tmp/tmp2Ljjxo/job_working_directory/000/3/working/cow.protein.PRG2012-subset.fasta" id="SearchDB_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	914 <FileFormat>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	915 <cvParam cvRef="PSI-MS" accession="MS:1001348" name="FASTA format"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	916 </FileFormat>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	917 <DatabaseName>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	918 <userParam name="cow.protein.PRG2012-subset.fasta"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	919 </DatabaseName>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	920 <cvParam cvRef="PSI-MS" accession="MS:1001197" name="DB composition target+decoy"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	921 <cvParam cvRef="PSI-MS" accession="MS:1001283" name="decoy DB accession regexp" value="^XXX"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	922 <cvParam cvRef="PSI-MS" accession="MS:1001195" name="decoy DB type reverse"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	923 </SearchDatabase>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	924 <SpectraData location="/private/tmp/tmp2Ljjxo/job_working_directory/000/3/working/201208-378803.mzML" id="SID_1" name="201208-378803.mzML">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	925 <FileFormat>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	926 <cvParam cvRef="PSI-MS" accession="MS:1000584" name="mzML file"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	927 </FileFormat>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	928 <SpectrumIDFormat>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	929 <cvParam cvRef="PSI-MS" accession="MS:1000770" name="WIFF nativeID format"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	930 </SpectrumIDFormat>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	931 </SpectraData>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	932 </Inputs>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	933 <AnalysisData>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	934 <SpectrumIdentificationList id="SI_LIST_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	935 <FragmentationTable>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	936 <Measure id="Measure_MZ">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	937 <cvParam cvRef="PSI-MS" accession="MS:1001225" name="product ion m/z" unitAccession="MS:1000040" unitName="m/z" unitCvRef="PSI-MS"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	938 </Measure>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	939 </FragmentationTable>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	940 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1224 experiment=2" spectraData_ref="SID_1" id="SIR_86">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	941 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="576.2933349609375" calculatedMassToCharge="576.2904663085938" peptide_ref="Pep_ISELFDKLDSMSVDK" rank="1" passThreshold="true" id="SII_86_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	942 <PeptideEvidenceRef peptideEvidence_ref="PepEv_84238_ISELFDKLDSMSVDK_607"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	943 <PeptideEvidenceRef peptideEvidence_ref="PepEv_85050_ISELFDKLDSMSVDK_603"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	944 <PeptideEvidenceRef peptideEvidence_ref="PepEv_85817_ISELFDKLDSMSVDK_558"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	945 <PeptideEvidenceRef peptideEvidence_ref="PepEv_93903_ISELFDKLDSMSVDK_418"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	946 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	947 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="57"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	948 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="9.778316E-8"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	949 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="0.003944279"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	950 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="0.5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	951 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="0.5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	952 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	953 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	954 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	955 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	956 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1209 experiment=2" spectraData_ref="SID_1" id="SIR_39">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	957 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="452.254638671875" calculatedMassToCharge="451.93316650390625" peptide_ref="Pep_PKNDPKLKTQGK" rank="1" passThreshold="true" id="SII_39_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	958 <PeptideEvidenceRef peptideEvidence_ref="PepEv_31410_PKNDPKLKTQGK_318"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	959 <PeptideEvidenceRef peptideEvidence_ref="PepEv_32123_PKNDPKLKTQGK_262"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	960 <PeptideEvidenceRef peptideEvidence_ref="PepEv_32809_PKNDPKLKTQGK_235"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	961 <PeptideEvidenceRef peptideEvidence_ref="PepEv_47926_PKNDPKLKTQGK_262"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	962 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="7"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	963 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="54"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	964 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="8.911494E-7"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	965 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="0.0355328"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	966 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="0.5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	967 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="0.5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	968 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	969 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	970 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	971 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	972 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1215 experiment=4" spectraData_ref="SID_1" id="SIR_64">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	973 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="674.3531494140625" calculatedMassToCharge="673.8528442382812" peptide_ref="Pep_EPISVSSQQMLK" rank="1" passThreshold="true" id="SII_64_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	974 <PeptideEvidenceRef peptideEvidence_ref="PepEv_47057_EPISVSSQQMLK_213"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	975 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	976 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="62"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	977 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="1.9064777E-6"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	978 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="0.076016985"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	979 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="0.5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	980 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="0.5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	981 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	982 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	983 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	984 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	985 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1211 experiment=5" spectraData_ref="SID_1" id="SIR_49">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	986 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="498.2347412109375" calculatedMassToCharge="497.9245300292969" peptide_ref="Pep_VWGFKVAGAQDEGK" rank="1" passThreshold="true" id="SII_49_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	987 <PeptideEvidenceRef peptideEvidence_ref="PepEv_105272_VWGFKVAGAQDEGK_920"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	988 <PeptideEvidenceRef peptideEvidence_ref="PepEv_108178_VWGFKVAGAQDEGK_952"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	989 <PeptideEvidenceRef peptideEvidence_ref="PepEv_109278_VWGFKVAGAQDEGK_920"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	990 <PeptideEvidenceRef peptideEvidence_ref="PepEv_110378_VWGFKVAGAQDEGK_920"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	991 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	992 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="49"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	993 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="2.5485353E-6"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	994 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="0.10241799"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	995 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="0.5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	996 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="0.5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	997 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	998 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	999 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1000 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1001 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1219 experiment=4" spectraData_ref="SID_1" id="SIR_79">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1002 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="482.21160888671875" calculatedMassToCharge="482.2301330566406" peptide_ref="Pep_PTAEFQDR" rank="1" passThreshold="true" id="SII_79_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1003 <PeptideEvidenceRef peptideEvidence_ref="PepEv_47594_PTAEFQDR_489"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1004 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1005 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="45"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1006 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="2.6478965E-6"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1007 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="0.10364397"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1008 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="0.5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1009 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="0.5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1010 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1011 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1012 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1013 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1014 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1207 experiment=3" spectraData_ref="SID_1" id="SIR_36">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1015 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="467.236083984375" calculatedMassToCharge="467.2357482910156" peptide_ref="Pep_TVMENFVAFVDK" rank="1" passThreshold="true" id="SII_36_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1016 <PeptideEvidenceRef peptideEvidence_ref="PepEv_44505_TVMENFVAFVDK_569"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1017 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-6"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1018 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="57"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1019 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="3.189995E-6"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1020 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="0.12719467"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1021 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="0.5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1022 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="0.5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1023 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1024 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1025 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1026 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1027 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1239 experiment=2" spectraData_ref="SID_1" id="SIR_102">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1028 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="486.2041320800781" calculatedMassToCharge="485.8894958496094" peptide_ref="Pep_ESRCSRESRCSR" rank="1" passThreshold="true" id="SII_102_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1029 <PeptideEvidenceRef peptideEvidence_ref="PepEv_72991_ESRCSRESRCSR_7512"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1030 <PeptideEvidenceRef peptideEvidence_ref="PepEv_78490_ESRCSRESRCSR_5400"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1031 <PeptideEvidenceRef peptideEvidence_ref="PepEv_99888_ESRCSRESRCSR_5400"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1032 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-11"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1033 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="56"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1034 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="5.136259E-6"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1035 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="0.20479806"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1036 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="0.75"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1037 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="0.75"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1038 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1039 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1040 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1041 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1042 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1212 experiment=3" spectraData_ref="SID_1" id="SIR_51">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1043 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="577.2473754882812" calculatedMassToCharge="576.9359130859375" peptide_ref="Pep_ACCEELTAEYEKALR" rank="1" passThreshold="true" id="SII_51_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1044 <PeptideEvidenceRef peptideEvidence_ref="PepEv_100134_ACCEELTAEYEKALR_223"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1045 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="3"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1046 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="101"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1047 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="5.329578E-6"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1048 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="0.21497919"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1049 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1050 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1051 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1052 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1053 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1054 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1055 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1210 experiment=4" spectraData_ref="SID_1" id="SIR_45">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1056 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="547.7760620117188" calculatedMassToCharge="547.2616577148438" peptide_ref="Pep_EVEDEGFLR" rank="1" passThreshold="true" id="SII_45_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1057 <PeptideEvidenceRef peptideEvidence_ref="PepEv_67474_EVEDEGFLR_1995"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1058 <PeptideEvidenceRef peptideEvidence_ref="PepEv_75015_EVEDEGFLR_1925"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1059 <PeptideEvidenceRef peptideEvidence_ref="PepEv_96413_EVEDEGFLR_1925"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1060 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-7"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1061 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="41"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1062 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="7.260432E-6"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1063 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="0.28565443"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1064 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1065 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1066 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1067 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1068 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1069 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1070 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1235 experiment=2" spectraData_ref="SID_1" id="SIR_98">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1071 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="667.8607788085938" calculatedMassToCharge="667.3414306640625" peptide_ref="Pep_MHQIYVQCAKL" rank="1" passThreshold="true" id="SII_98_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1072 <PeptideEvidenceRef peptideEvidence_ref="PepEv_60613_MHQIYVQCAKL_39"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1073 <PeptideEvidenceRef peptideEvidence_ref="PepEv_61866_MHQIYVQCAKL_39"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1074 <PeptideEvidenceRef peptideEvidence_ref="PepEv_89886_MHQIYVQCAKL_39"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1075 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-11"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1076 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="67"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1077 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="7.413187E-6"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1078 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="0.29435542"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1079 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1080 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1081 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1082 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1083 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1084 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1085 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1212 experiment=4" spectraData_ref="SID_1" id="SIR_52">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1086 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="598.3059692382812" calculatedMassToCharge="598.323974609375" peptide_ref="Pep_KKYMRWMNHKKSR" rank="1" passThreshold="true" id="SII_52_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1087 <PeptideEvidenceRef peptideEvidence_ref="PepEv_16693_KKYMRWMNHKKSR_7189"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1088 <PeptideEvidenceRef peptideEvidence_ref="PepEv_22258_KKYMRWMNHKKSR_5143"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1089 <PeptideEvidenceRef peptideEvidence_ref="PepEv_43580_KKYMRWMNHKKSR_5067"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1090 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-8"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1091 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="65"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1092 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="8.5034735E-6"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1093 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="0.34040257"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1094 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1095 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1096 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1097 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1098 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1099 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1100 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1217 experiment=2" spectraData_ref="SID_1" id="SIR_69">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1101 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="501.7442626953125" calculatedMassToCharge="501.76434326171875" peptide_ref="Pep_LAEAEKEGR" rank="1" passThreshold="true" id="SII_69_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1102 <PeptideEvidenceRef peptideEvidence_ref="PepEv_12182_LAEAEKEGR_2678"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1103 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="15"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1104 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="81"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1105 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="8.546935E-6"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1106 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="0.3362706"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1107 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1108 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1109 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1110 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1111 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1112 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1113 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1223 experiment=2" spectraData_ref="SID_1" id="SIR_84">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1114 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="610.7609252929688" calculatedMassToCharge="610.784423828125" peptide_ref="Pep_AEMFEHLSEK" rank="1" passThreshold="true" id="SII_84_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1115 <PeptideEvidenceRef peptideEvidence_ref="PepEv_13770_AEMFEHLSEK_4266"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1116 <PeptideEvidenceRef peptideEvidence_ref="PepEv_19339_AEMFEHLSEK_2224"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1117 <PeptideEvidenceRef peptideEvidence_ref="PepEv_40661_AEMFEHLSEK_2148"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1118 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="3"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1119 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="96"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1120 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="8.9886025E-6"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1121 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="0.35534644"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1122 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1123 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1124 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1125 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1126 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1127 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1128 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1428 experiment=2" spectraData_ref="SID_1" id="SIR_105">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1129 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="585.301513671875" calculatedMassToCharge="584.772705078125" peptide_ref="Pep_SFNQEPQYR" rank="1" passThreshold="true" id="SII_105_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1130 <PeptideEvidenceRef peptideEvidence_ref="PepEv_93047_SFNQEPQYR_190"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1131 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-15"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1132 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="77"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1133 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="9.87155E-6"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1134 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="0.38838625"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1135 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1136 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1137 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1138 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1139 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1140 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1141 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1283 experiment=2" spectraData_ref="SID_1" id="SIR_104">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1142 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="591.3255615234375" calculatedMassToCharge="591.2969360351562" peptide_ref="Pep_SKVNNYFWELSQTR" rank="1" passThreshold="true" id="SII_104_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1143 <PeptideEvidenceRef peptideEvidence_ref="PepEv_63753_SKVNNYFWELSQTR_728"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1144 <PeptideEvidenceRef peptideEvidence_ref="PepEv_64608_SKVNNYFWELSQTR_728"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1145 <PeptideEvidenceRef peptideEvidence_ref="PepEv_91875_SKVNNYFWELSQTR_728"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1146 <PeptideEvidenceRef peptideEvidence_ref="PepEv_92730_SKVNNYFWELSQTR_728"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1147 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1148 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="87"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1149 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="9.987389E-6"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1150 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="0.4013632"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1151 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1152 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1153 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1154 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1155 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1156 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1157 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1210 experiment=2" spectraData_ref="SID_1" id="SIR_43">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1158 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="597.2890625" calculatedMassToCharge="596.7909545898438" peptide_ref="Pep_PNTEPTHHFI" rank="1" passThreshold="true" id="SII_43_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1159 <PeptideEvidenceRef peptideEvidence_ref="PepEv_9220_PNTEPTHHFI_460"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1160 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1161 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="93"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1162 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="1.0661531E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1163 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="0.42148226"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1164 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1165 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1166 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1167 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1168 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1169 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1170 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1216 experiment=5" spectraData_ref="SID_1" id="SIR_68">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1171 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="575.8047485351562" calculatedMassToCharge="575.8055419921875" peptide_ref="Pep_EGVAICKAGFR" rank="1" passThreshold="true" id="SII_68_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1172 <PeptideEvidenceRef peptideEvidence_ref="PepEv_103307_EGVAICKAGFR_227"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1173 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="8"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1174 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="72"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1175 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="1.1603542E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1176 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="0.46074182"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1177 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1178 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1179 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1180 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1181 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1182 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1183 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1217 experiment=4" spectraData_ref="SID_1" id="SIR_71">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1184 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="571.8231811523438" calculatedMassToCharge="571.3450317382812" peptide_ref="Pep_QLEDILVLAK" rank="1" passThreshold="true" id="SII_71_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1185 <PeptideEvidenceRef peptideEvidence_ref="PepEv_14994_QLEDILVLAK_5490"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1186 <PeptideEvidenceRef peptideEvidence_ref="PepEv_20563_QLEDILVLAK_3448"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1187 <PeptideEvidenceRef peptideEvidence_ref="PepEv_41885_QLEDILVLAK_3372"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1188 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1189 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="59"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1190 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="1.18926155E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1191 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="0.47015077"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1192 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1193 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1194 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1195 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1196 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1197 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1198 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1223 experiment=3" spectraData_ref="SID_1" id="SIR_85">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1199 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="478.24365234375" calculatedMassToCharge="478.26397705078125" peptide_ref="Pep_AAQGALQPSL" rank="1" passThreshold="true" id="SII_85_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1200 <PeptideEvidenceRef peptideEvidence_ref="PepEv_5629_AAQGALQPSL_1030"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1201 <PeptideEvidenceRef peptideEvidence_ref="PepEv_6827_AAQGALQPSL_975"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1202 <PeptideEvidenceRef peptideEvidence_ref="PepEv_34949_AAQGALQPSL_1077"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1203 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-16"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1204 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="56"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1205 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="1.2600591E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1206 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="0.49813917"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1207 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1208 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1209 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1210 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1211 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1212 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1213 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1214 experiment=5" spectraData_ref="SID_1" id="SIR_61">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1214 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="519.6590576171875" calculatedMassToCharge="519.640869140625" peptide_ref="Pep_VNPVTALTLLEKMK" rank="1" passThreshold="true" id="SII_61_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1215 <PeptideEvidenceRef peptideEvidence_ref="PepEv_29231_VNPVTALTLLEKMK_759"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1216 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1217 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="56"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1218 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="1.9413415E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1219 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="0.780167"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1220 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1221 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1222 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1223 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1224 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1225 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1226 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1204 experiment=3" spectraData_ref="SID_1" id="SIR_32">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1227 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="722.7725830078125" calculatedMassToCharge="722.4049682617188" peptide_ref="Pep_FEIWVELLKYLEEIRGK" rank="1" passThreshold="true" id="SII_32_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1228 <PeptideEvidenceRef peptideEvidence_ref="PepEv_72627_FEIWVELLKYLEEIRGK_7148"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1229 <PeptideEvidenceRef peptideEvidence_ref="PepEv_78126_FEIWVELLKYLEEIRGK_5036"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1230 <PeptideEvidenceRef peptideEvidence_ref="PepEv_99524_FEIWVELLKYLEEIRGK_5036"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1231 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-16"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1232 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="82"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1233 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="2.0022577E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1234 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="0.8135574"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1235 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1236 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1237 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1238 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1239 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1240 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1241 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1231 experiment=2" spectraData_ref="SID_1" id="SIR_96">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1242 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="490.2488098144531" calculatedMassToCharge="489.9119567871094" peptide_ref="Pep_TIFDTEIESTSPK" rank="1" passThreshold="true" id="SII_96_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1243 <PeptideEvidenceRef peptideEvidence_ref="PepEv_27908_TIFDTEIESTSPK_252"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1244 <PeptideEvidenceRef peptideEvidence_ref="PepEv_28724_TIFDTEIESTSPK_252"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1245 <PeptideEvidenceRef peptideEvidence_ref="PepEv_29536_TIFDTEIESTSPK_252"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1246 <PeptideEvidenceRef peptideEvidence_ref="PepEv_37762_TIFDTEIESTSPK_252"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1247 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-18"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1248 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="65"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1249 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="2.1515163E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1250 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="0.8612735"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1251 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1252 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1253 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1254 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1255 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1256 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1257 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1236 experiment=2" spectraData_ref="SID_1" id="SIR_99">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1258 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="482.2271423339844" calculatedMassToCharge="481.73980712890625" peptide_ref="Pep_DTNIQICR" rank="1" passThreshold="true" id="SII_99_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1259 <PeptideEvidenceRef peptideEvidence_ref="PepEv_60768_DTNIQICR_194"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1260 <PeptideEvidenceRef peptideEvidence_ref="PepEv_62021_DTNIQICR_194"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1261 <PeptideEvidenceRef peptideEvidence_ref="PepEv_90041_DTNIQICR_194"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1262 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-6"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1263 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="67"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1264 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="2.2036973E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1265 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="0.86257124"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1266 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1267 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1268 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1269 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1270 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1271 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1272 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1220 experiment=2" spectraData_ref="SID_1" id="SIR_80">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1273 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="410.2142639160156" calculatedMassToCharge="409.8983459472656" peptide_ref="Pep_QLEGRLQDLR" rank="1" passThreshold="true" id="SII_80_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1274 <PeptideEvidenceRef peptideEvidence_ref="PepEv_13046_QLEGRLQDLR_3542"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1275 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-8"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1276 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="51"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1277 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="2.3277607E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1278 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="0.9202336"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1279 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1280 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1281 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1282 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1283 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1284 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1285 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1203 experiment=3" spectraData_ref="SID_1" id="SIR_30">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1286 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="520.2384033203125" calculatedMassToCharge="519.742919921875" peptide_ref="Pep_RAFQECER" rank="1" passThreshold="true" id="SII_30_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1287 <PeptideEvidenceRef peptideEvidence_ref="PepEv_83736_RAFQECER_105"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1288 <PeptideEvidenceRef peptideEvidence_ref="PepEv_84548_RAFQECER_101"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1289 <PeptideEvidenceRef peptideEvidence_ref="PepEv_85315_RAFQECER_56"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1290 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1291 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="55"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1292 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="2.5448287E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1293 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="0.99609685"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1294 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1295 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1296 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1297 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1298 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1299 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1300 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1181 experiment=2" spectraData_ref="SID_1" id="SIR_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1301 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="506.7447204589844" calculatedMassToCharge="506.2500305175781" peptide_ref="Pep_LECTNLYR" rank="1" passThreshold="true" id="SII_1_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1302 <PeptideEvidenceRef peptideEvidence_ref="PepEv_10101_LECTNLYR_597"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1303 <PeptideEvidenceRef peptideEvidence_ref="PepEv_17712_LECTNLYR_597"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1304 <PeptideEvidenceRef peptideEvidence_ref="PepEv_39034_LECTNLYR_521"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1305 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-17"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1306 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="35"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1307 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="2.9523253E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1308 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="1.1555992"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1309 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1310 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1311 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1312 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1313 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1314 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1315 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1202 experiment=2" spectraData_ref="SID_1" id="SIR_27">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1316 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="489.23614501953125" calculatedMassToCharge="489.2486877441406" peptide_ref="Pep_LMLLSRDDSGSGSK" rank="1" passThreshold="true" id="SII_27_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1317 <PeptideEvidenceRef peptideEvidence_ref="PepEv_16054_LMLLSRDDSGSGSK_6550"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1318 <PeptideEvidenceRef peptideEvidence_ref="PepEv_21623_LMLLSRDDSGSGSK_4508"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1319 <PeptideEvidenceRef peptideEvidence_ref="PepEv_42945_LMLLSRDDSGSGSK_4432"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1320 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-17"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1321 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="75"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1322 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="3.1620126E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1323 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="1.270718"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1324 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1325 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1326 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1327 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1328 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1329 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1330 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1207 experiment=2" spectraData_ref="SID_1" id="SIR_35">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1331 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="540.2457885742188" calculatedMassToCharge="540.2278442382812" peptide_ref="Pep_ATEGTQLFNDYCEQ" rank="1" passThreshold="true" id="SII_35_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1332 <PeptideEvidenceRef peptideEvidence_ref="PepEv_105372_ATEGTQLFNDYCEQ_1020"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1333 <PeptideEvidenceRef peptideEvidence_ref="PepEv_108278_ATEGTQLFNDYCEQ_1052"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1334 <PeptideEvidenceRef peptideEvidence_ref="PepEv_109378_ATEGTQLFNDYCEQ_1020"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1335 <PeptideEvidenceRef peptideEvidence_ref="PepEv_110478_ATEGTQLFNDYCEQ_1020"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1336 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-15"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1337 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="77"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1338 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="3.191305E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1339 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="1.2824897"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1340 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1341 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1342 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1343 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1344 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1345 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1346 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1222 experiment=2" spectraData_ref="SID_1" id="SIR_83">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1347 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="582.2852172851562" calculatedMassToCharge="582.3135986328125" peptide_ref="Pep_IQNGALNCEEKLTLAK" rank="1" passThreshold="true" id="SII_83_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1348 <PeptideEvidenceRef peptideEvidence_ref="PepEv_10016_IQNGALNCEEKLTLAK_512"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1349 <PeptideEvidenceRef peptideEvidence_ref="PepEv_17627_IQNGALNCEEKLTLAK_512"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1350 <PeptideEvidenceRef peptideEvidence_ref="PepEv_38949_IQNGALNCEEKLTLAK_436"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1351 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-17"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1352 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="94"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1353 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="3.4877667E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1354 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="1.4119875"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1355 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1356 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1357 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1358 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1359 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1360 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1361 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1229 experiment=3" spectraData_ref="SID_1" id="SIR_91">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1362 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="710.8026733398438" calculatedMassToCharge="710.7939453125" peptide_ref="Pep_CVCDECGRGFGFK" rank="1" passThreshold="true" id="SII_91_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1363 <PeptideEvidenceRef peptideEvidence_ref="PepEv_801_CVCDECGRGFGFK_554"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1364 <PeptideEvidenceRef peptideEvidence_ref="PepEv_1418_CVCDECGRGFGFK_554"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1365 <PeptideEvidenceRef peptideEvidence_ref="PepEv_2035_CVCDECGRGFGFK_554"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1366 <PeptideEvidenceRef peptideEvidence_ref="PepEv_2651_CVCDECGRGFGFK_553"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1367 <PeptideEvidenceRef peptideEvidence_ref="PepEv_3248_CVCDECGRGFGFK_534"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1368 <PeptideEvidenceRef peptideEvidence_ref="PepEv_3837_CVCDECGRGFGFK_526"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1369 <PeptideEvidenceRef peptideEvidence_ref="PepEv_24557_CVCDECGRGFGFK_554"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1370 <PeptideEvidenceRef peptideEvidence_ref="PepEv_25174_CVCDECGRGFGFK_554"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1371 <PeptideEvidenceRef peptideEvidence_ref="PepEv_25791_CVCDECGRGFGFK_554"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1372 <PeptideEvidenceRef peptideEvidence_ref="PepEv_26407_CVCDECGRGFGFK_553"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1373 <PeptideEvidenceRef peptideEvidence_ref="PepEv_27004_CVCDECGRGFGFK_534"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1374 <PeptideEvidenceRef peptideEvidence_ref="PepEv_27593_CVCDECGRGFGFK_526"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1375 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-24"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1376 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="53"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1377 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="3.7364465E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1378 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="1.495737"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1379 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1380 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1381 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1382 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1383 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1384 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1385 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1213 experiment=3" spectraData_ref="SID_1" id="SIR_55">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1386 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="547.2749633789062" calculatedMassToCharge="547.2713012695312" peptide_ref="Pep_RMMESRQR" rank="1" passThreshold="true" id="SII_55_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1387 <PeptideEvidenceRef peptideEvidence_ref="PepEv_64768_RMMESRQR_33"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1388 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-14"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1389 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="42"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1390 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="3.915081E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1391 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="1.532441"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1392 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1393 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1394 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1395 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1396 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1397 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1398 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1219 experiment=2" spectraData_ref="SID_1" id="SIR_77">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1399 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="487.2433166503906" calculatedMassToCharge="487.2510681152344" peptide_ref="Pep_RSDVEQLDQEIK" rank="1" passThreshold="true" id="SII_77_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1400 <PeptideEvidenceRef peptideEvidence_ref="PepEv_14282_RSDVEQLDQEIK_4778"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1401 <PeptideEvidenceRef peptideEvidence_ref="PepEv_19851_RSDVEQLDQEIK_2736"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1402 <PeptideEvidenceRef peptideEvidence_ref="PepEv_41173_RSDVEQLDQEIK_2660"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1403 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-10"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1404 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="80"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1405 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="4.2131483E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1406 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="1.6799086"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1407 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1408 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1409 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1410 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1411 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1412 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1413 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1228 experiment=3" spectraData_ref="SID_1" id="SIR_89">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1414 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="606.2748413085938" calculatedMassToCharge="605.7780151367188" peptide_ref="Pep_WQEYQSRVD" rank="1" passThreshold="true" id="SII_89_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1415 <PeptideEvidenceRef peptideEvidence_ref="PepEv_9896_WQEYQSRVD_392"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1416 <PeptideEvidenceRef peptideEvidence_ref="PepEv_17507_WQEYQSRVD_392"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1417 <PeptideEvidenceRef peptideEvidence_ref="PepEv_38829_WQEYQSRVD_316"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1418 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-21"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1419 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="36"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1420 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="4.2569478E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1421 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="1.6748536"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1422 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1423 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1424 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1425 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1426 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1427 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1428 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1209 experiment=3" spectraData_ref="SID_1" id="SIR_40">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1429 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="570.7028198242188" calculatedMassToCharge="570.3568115234375" peptide_ref="Pep_RKFIIHRGKRKAAQ" rank="1" passThreshold="true" id="SII_40_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1430 <PeptideEvidenceRef peptideEvidence_ref="PepEv_5618_RKFIIHRGKRKAAQ_1019"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1431 <PeptideEvidenceRef peptideEvidence_ref="PepEv_6816_RKFIIHRGKRKAAQ_964"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1432 <PeptideEvidenceRef peptideEvidence_ref="PepEv_34938_RKFIIHRGKRKAAQ_1066"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1433 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-13"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1434 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="89"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1435 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="4.495753E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1436 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="1.8067082"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1437 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1438 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1439 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1440 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1441 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1442 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1443 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1192 experiment=2" spectraData_ref="SID_1" id="SIR_10">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1444 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="443.2386779785156" calculatedMassToCharge="442.91363525390625" peptide_ref="Pep_VKDIVNLTDVNP" rank="1" passThreshold="true" id="SII_10_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1445 <PeptideEvidenceRef peptideEvidence_ref="PepEv_70903_VKDIVNLTDVNP_5424"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1446 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-11"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1447 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="56"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1448 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="4.838571E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1449 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="1.9292834"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1450 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1451 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1452 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1453 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1454 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1455 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1456 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1218 experiment=4" spectraData_ref="SID_1" id="SIR_75">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1457 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="647.8163452148438" calculatedMassToCharge="647.343505859375" peptide_ref="Pep_KELVDQRYDK" rank="1" passThreshold="true" id="SII_75_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1458 <PeptideEvidenceRef peptideEvidence_ref="PepEv_67447_KELVDQRYDK_1968"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1459 <PeptideEvidenceRef peptideEvidence_ref="PepEv_74988_KELVDQRYDK_1898"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1460 <PeptideEvidenceRef peptideEvidence_ref="PepEv_96386_KELVDQRYDK_1898"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1461 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-21"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1462 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="49"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1463 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="4.8764297E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1464 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="1.9277989"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1465 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1466 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1467 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1468 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1469 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1470 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="647.8163452148438" calculatedMassToCharge="647.3038940429688" peptide_ref="Pep_QNIDRCYPER" rank="2" passThreshold="true" id="SII_75_2">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1471 <PeptideEvidenceRef peptideEvidence_ref="PepEv_105840_QNIDRCYPER_11"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1472 <PeptideEvidenceRef peptideEvidence_ref="PepEv_106560_QNIDRCYPER_11"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1473 <PeptideEvidenceRef peptideEvidence_ref="PepEv_110907_QNIDRCYPER_11"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1474 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-21"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1475 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="49"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1476 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="4.8764297E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1477 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="1.9277989"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1478 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1479 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1480 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1481 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1482 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1483 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1484 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1216 experiment=2" spectraData_ref="SID_1" id="SIR_65">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1485 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="464.21527099609375" calculatedMassToCharge="463.9016418457031" peptide_ref="Pep_QLAQQTEQKGCR" rank="1" passThreshold="true" id="SII_65_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1486 <PeptideEvidenceRef peptideEvidence_ref="PepEv_11117_QLAQQTEQKGCR_1613"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1487 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-17"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1488 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="61"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1489 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="4.9378592E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1490 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="1.9688725"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1491 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1492 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1493 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1494 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1495 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1496 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1497 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1193 experiment=2" spectraData_ref="SID_1" id="SIR_12">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1498 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="458.7034606933594" calculatedMassToCharge="458.7241516113281" peptide_ref="Pep_IFELEEH" rank="1" passThreshold="true" id="SII_12_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1499 <PeptideEvidenceRef peptideEvidence_ref="PepEv_66874_IFELEEH_1395"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1500 <PeptideEvidenceRef peptideEvidence_ref="PepEv_74415_IFELEEH_1325"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1501 <PeptideEvidenceRef peptideEvidence_ref="PepEv_95813_IFELEEH_1325"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1502 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="15"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1503 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="103"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1504 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="5.257032E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1505 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="2.046142"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1506 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1507 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1508 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1509 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1510 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1511 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1512 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1212 experiment=2" spectraData_ref="SID_1" id="SIR_50">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1513 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="653.3101806640625" calculatedMassToCharge="652.9561767578125" peptide_ref="Pep_VFEEMIEPYCLHESCK" rank="1" passThreshold="true" id="SII_50_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1514 <PeptideEvidenceRef peptideEvidence_ref="PepEv_49367_VFEEMIEPYCLHESCK_990"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1515 <PeptideEvidenceRef peptideEvidence_ref="PepEv_52273_VFEEMIEPYCLHESCK_1022"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1516 <PeptideEvidenceRef peptideEvidence_ref="PepEv_53373_VFEEMIEPYCLHESCK_990"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1517 <PeptideEvidenceRef peptideEvidence_ref="PepEv_54473_VFEEMIEPYCLHESCK_990"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1518 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-14"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1519 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="87"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1520 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="5.4227086E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1521 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="2.1953294"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1522 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1523 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1524 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1525 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1526 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1527 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1528 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1213 experiment=5" spectraData_ref="SID_1" id="SIR_57">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1529 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="575.3018188476562" calculatedMassToCharge="575.3118286132812" peptide_ref="Pep_GLRFDWSLR" rank="1" passThreshold="true" id="SII_57_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1530 <PeptideEvidenceRef peptideEvidence_ref="PepEv_106357_GLRFDWSLR_528"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1531 <PeptideEvidenceRef peptideEvidence_ref="PepEv_107077_GLRFDWSLR_528"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1532 <PeptideEvidenceRef peptideEvidence_ref="PepEv_111424_GLRFDWSLR_528"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1533 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-21"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1534 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="45"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1535 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="5.5088716E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1536 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="2.1674106"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1537 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1538 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1539 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1540 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1541 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1542 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1543 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1229 experiment=4" spectraData_ref="SID_1" id="SIR_92">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1544 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="832.8515625" calculatedMassToCharge="832.825439453125" peptide_ref="Pep_VLETLGINKRKIVNQLSNSLTR" rank="1" passThreshold="true" id="SII_92_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1545 <PeptideEvidenceRef peptideEvidence_ref="PepEv_83890_VLETLGINKRKIVNQLSNSLTR_259"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1546 <PeptideEvidenceRef peptideEvidence_ref="PepEv_84702_VLETLGINKRKIVNQLSNSLTR_255"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1547 <PeptideEvidenceRef peptideEvidence_ref="PepEv_85469_VLETLGINKRKIVNQLSNSLTR_210"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1548 <PeptideEvidenceRef peptideEvidence_ref="PepEv_93555_VLETLGINKRKIVNQLSNSLTR_70"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1549 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-25"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1550 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="107"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1551 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="5.553615E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1552 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="2.2965865"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1553 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1554 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1555 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1556 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1557 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1558 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1559 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1234 experiment=2" spectraData_ref="SID_1" id="SIR_97">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1560 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="516.2442626953125" calculatedMassToCharge="516.2300415039062" peptide_ref="Pep_DPDNSIELE" rank="1" passThreshold="true" id="SII_97_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1561 <PeptideEvidenceRef peptideEvidence_ref="PepEv_66353_DPDNSIELE_874"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1562 <PeptideEvidenceRef peptideEvidence_ref="PepEv_73894_DPDNSIELE_804"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1563 <PeptideEvidenceRef peptideEvidence_ref="PepEv_95292_DPDNSIELE_804"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1564 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1565 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="67"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1566 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="5.5706063E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1567 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="2.1916993"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1568 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1569 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1570 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1571 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1572 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1573 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1574 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1580 experiment=2" spectraData_ref="SID_1" id="SIR_106">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1575 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="533.2622680664062" calculatedMassToCharge="532.9508666992188" peptide_ref="Pep_LIIQLEQGDEPWR" rank="1" passThreshold="true" id="SII_106_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1576 <PeptideEvidenceRef peptideEvidence_ref="PepEv_324_LIIQLEQGDEPWR_77"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1577 <PeptideEvidenceRef peptideEvidence_ref="PepEv_941_LIIQLEQGDEPWR_77"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1578 <PeptideEvidenceRef peptideEvidence_ref="PepEv_1558_LIIQLEQGDEPWR_77"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1579 <PeptideEvidenceRef peptideEvidence_ref="PepEv_2175_LIIQLEQGDEPWR_77"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1580 <PeptideEvidenceRef peptideEvidence_ref="PepEv_2771_LIIQLEQGDEPWR_57"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1581 <PeptideEvidenceRef peptideEvidence_ref="PepEv_3360_LIIQLEQGDEPWR_49"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1582 <PeptideEvidenceRef peptideEvidence_ref="PepEv_24080_LIIQLEQGDEPWR_77"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1583 <PeptideEvidenceRef peptideEvidence_ref="PepEv_24697_LIIQLEQGDEPWR_77"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1584 <PeptideEvidenceRef peptideEvidence_ref="PepEv_25314_LIIQLEQGDEPWR_77"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1585 <PeptideEvidenceRef peptideEvidence_ref="PepEv_25931_LIIQLEQGDEPWR_77"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1586 <PeptideEvidenceRef peptideEvidence_ref="PepEv_26527_LIIQLEQGDEPWR_57"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1587 <PeptideEvidenceRef peptideEvidence_ref="PepEv_27116_LIIQLEQGDEPWR_49"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1588 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-31"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1589 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="38"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1590 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="5.964108E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1591 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="2.387492"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1592 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1593 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1594 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1595 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1596 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1597 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1598 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1212 experiment=5" spectraData_ref="SID_1" id="SIR_53">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1599 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="584.6378784179688" calculatedMassToCharge="584.2821044921875" peptide_ref="Pep_DPAPEGEIEMLDHAVK" rank="1" passThreshold="true" id="SII_53_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1600 <PeptideEvidenceRef peptideEvidence_ref="PepEv_68969_DPAPEGEIEMLDHAVK_3490"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1601 <PeptideEvidenceRef peptideEvidence_ref="PepEv_76510_DPAPEGEIEMLDHAVK_3420"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1602 <PeptideEvidenceRef peptideEvidence_ref="PepEv_97908_DPAPEGEIEMLDHAVK_3420"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1603 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-14"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1604 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="53"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1605 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="6.189589E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1606 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="2.505793"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1607 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1608 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1609 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1610 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1611 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1612 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1613 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1191 experiment=3" spectraData_ref="SID_1" id="SIR_9">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1614 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="400.6839294433594" calculatedMassToCharge="400.6896057128906" peptide_ref="Pep_EVMEHR" rank="1" passThreshold="true" id="SII_9_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1615 <PeptideEvidenceRef peptideEvidence_ref="PepEv_15267_EVMEHR_5763"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1616 <PeptideEvidenceRef peptideEvidence_ref="PepEv_20836_EVMEHR_3721"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1617 <PeptideEvidenceRef peptideEvidence_ref="PepEv_42158_EVMEHR_3645"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1618 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-14"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1619 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="27"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1620 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="6.842939E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1621 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="2.6465752"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1622 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1623 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1624 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1625 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1626 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1627 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1628 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1191 experiment=2" spectraData_ref="SID_1" id="SIR_8">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1629 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="435.7113037109375" calculatedMassToCharge="435.212890625" peptide_ref="Pep_YNKCVDK" rank="1" passThreshold="true" id="SII_8_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1630 <PeptideEvidenceRef peptideEvidence_ref="PepEv_100177_YNKCVDK_266"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1631 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-9"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1632 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="59"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1633 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="7.040255E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1634 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="2.7402081"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1635 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1636 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1637 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1638 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1639 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1640 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1641 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1187 experiment=2" spectraData_ref="SID_1" id="SIR_4">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1642 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="441.6909484863281" calculatedMassToCharge="441.2059326171875" peptide_ref="Pep_GFGRGCER" rank="1" passThreshold="true" id="SII_4_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1643 <PeptideEvidenceRef peptideEvidence_ref="PepEv_56555_GFGRGCER_333"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1644 <PeptideEvidenceRef peptideEvidence_ref="PepEv_57172_GFGRGCER_333"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1645 <PeptideEvidenceRef peptideEvidence_ref="PepEv_57789_GFGRGCER_333"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1646 <PeptideEvidenceRef peptideEvidence_ref="PepEv_58406_GFGRGCER_333"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1647 <PeptideEvidenceRef peptideEvidence_ref="PepEv_59022_GFGRGCER_333"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1648 <PeptideEvidenceRef peptideEvidence_ref="PepEv_59619_GFGRGCER_333"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1649 <PeptideEvidenceRef peptideEvidence_ref="PepEv_80311_GFGRGCER_333"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1650 <PeptideEvidenceRef peptideEvidence_ref="PepEv_80928_GFGRGCER_333"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1651 <PeptideEvidenceRef peptideEvidence_ref="PepEv_81545_GFGRGCER_333"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1652 <PeptideEvidenceRef peptideEvidence_ref="PepEv_82162_GFGRGCER_333"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1653 <PeptideEvidenceRef peptideEvidence_ref="PepEv_82778_GFGRGCER_333"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1654 <PeptideEvidenceRef peptideEvidence_ref="PepEv_83375_GFGRGCER_333"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1655 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-17"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1656 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="76"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1657 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="7.454565E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1658 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="2.9178658"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1659 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1660 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1661 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1662 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1663 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1664 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1665 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1209 experiment=5" spectraData_ref="SID_1" id="SIR_42">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1666 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="404.19219970703125" calculatedMassToCharge="404.2010192871094" peptide_ref="Pep_QLAQKYNCDK" rank="1" passThreshold="true" id="SII_42_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1667 <PeptideEvidenceRef peptideEvidence_ref="PepEv_23958_QLAQKYNCDK_84"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1668 <PeptideEvidenceRef peptideEvidence_ref="PepEv_46423_QLAQKYNCDK_84"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1669 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-14"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1670 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="51"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1671 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="7.684107E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1672 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="3.037758"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1673 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1674 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1675 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1676 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1677 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1678 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1679 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1202 experiment=3" spectraData_ref="SID_1" id="SIR_28">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1680 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="423.6785888671875" calculatedMassToCharge="423.6850280761719" peptide_ref="Pep_DLGEEHF" rank="1" passThreshold="true" id="SII_28_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1681 <PeptideEvidenceRef peptideEvidence_ref="PepEv_43973_DLGEEHF_37"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1682 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-12"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1683 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="36"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1684 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="7.7868164E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1685 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="3.0307846"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1686 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1687 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1688 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1689 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1690 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1691 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1692 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1215 experiment=3" spectraData_ref="SID_1" id="SIR_63">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1693 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="613.7810668945312" calculatedMassToCharge="613.30859375" peptide_ref="Pep_DLPFLSNEYK" rank="1" passThreshold="true" id="SII_63_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1694 <PeptideEvidenceRef peptideEvidence_ref="PepEv_12725_DLPFLSNEYK_3221"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1695 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-26"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1696 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="53"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1697 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="8.023354E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1698 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="3.1718724"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1699 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1700 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1701 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1702 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1703 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1704 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1705 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1627 experiment=2" spectraData_ref="SID_1" id="SIR_108">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1706 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="582.2650756835938" calculatedMassToCharge="582.2919921875" peptide_ref="Pep_DAHQKELVDQRYDK" rank="1" passThreshold="true" id="SII_108_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1707 <PeptideEvidenceRef peptideEvidence_ref="PepEv_67443_DAHQKELVDQRYDK_1964"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1708 <PeptideEvidenceRef peptideEvidence_ref="PepEv_74984_DAHQKELVDQRYDK_1894"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1709 <PeptideEvidenceRef peptideEvidence_ref="PepEv_96382_DAHQKELVDQRYDK_1894"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1710 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-44"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1711 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="44"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1712 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="8.592158E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1713 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="3.4529305"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1714 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1715 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1716 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1717 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1718 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1719 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1720 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1198 experiment=3" spectraData_ref="SID_1" id="SIR_18">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1721 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="613.275634765625" calculatedMassToCharge="612.79638671875" peptide_ref="Pep_QLQEELAEHQ" rank="1" passThreshold="true" id="SII_18_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1722 <PeptideEvidenceRef peptideEvidence_ref="PepEv_13593_QLQEELAEHQ_4089"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1723 <PeptideEvidenceRef peptideEvidence_ref="PepEv_19162_QLQEELAEHQ_2047"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1724 <PeptideEvidenceRef peptideEvidence_ref="PepEv_40484_QLQEELAEHQ_1971"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1725 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-29"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1726 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="47"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1727 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="8.59888E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1728 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="3.3993952"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1729 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1730 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1731 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1732 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1733 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1734 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1735 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1219 experiment=3" spectraData_ref="SID_1" id="SIR_78">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1736 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="509.2569580078125" calculatedMassToCharge="509.2572326660156" peptide_ref="Pep_DAENTVRGR" rank="1" passThreshold="true" id="SII_78_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1737 <PeptideEvidenceRef peptideEvidence_ref="PepEv_12037_DAENTVRGR_2533"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1738 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-23"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1739 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="42"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1740 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="8.931347E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1741 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="3.5139492"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1742 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1743 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1744 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1745 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1746 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1747 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1748 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1583 experiment=2" spectraData_ref="SID_1" id="SIR_107">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1749 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="487.24053955078125" calculatedMassToCharge="487.25946044921875" peptide_ref="Pep_LNKDEVVTVDEAK" rank="1" passThreshold="true" id="SII_107_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1750 <PeptideEvidenceRef peptideEvidence_ref="PepEv_70854_LNKDEVVTVDEAK_5375"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1751 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-27"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1752 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="45"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1753 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="9.3443494E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1754 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="3.7406363"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1755 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1756 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1757 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1758 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1759 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1760 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1761 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1192 experiment=3" spectraData_ref="SID_1" id="SIR_11">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1762 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="433.1874694824219" calculatedMassToCharge="433.20782470703125" peptide_ref="Pep_LSETEMR" rank="1" passThreshold="true" id="SII_11_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1763 <PeptideEvidenceRef peptideEvidence_ref="PepEv_9213_LSETEMR_453"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1764 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-20"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1765 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="34"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1766 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="9.6144715E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1767 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="3.7421446"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1768 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1769 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1770 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1771 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1772 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1773 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1774 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1217 experiment=3" spectraData_ref="SID_1" id="SIR_70">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1775 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="533.2589111328125" calculatedMassToCharge="532.7318725585938" peptide_ref="Pep_DELVCEDNK" rank="1" passThreshold="true" id="SII_70_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1776 <PeptideEvidenceRef peptideEvidence_ref="PepEv_72116_DELVCEDNK_6637"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1777 <PeptideEvidenceRef peptideEvidence_ref="PepEv_77617_DELVCEDNK_4527"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1778 <PeptideEvidenceRef peptideEvidence_ref="PepEv_99015_DELVCEDNK_4527"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1779 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-19"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1780 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="100"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1781 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="9.8740595E-5"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1782 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="3.88485"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1783 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1784 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1785 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1786 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1787 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1788 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1789 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1204 experiment=2" spectraData_ref="SID_1" id="SIR_31">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1790 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="623.2515258789062" calculatedMassToCharge="623.27490234375" peptide_ref="Pep_CIMKDCNYKQ" rank="1" passThreshold="true" id="SII_31_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1791 <PeptideEvidenceRef peptideEvidence_ref="PepEv_79882_CIMKDCNYKQ_33"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1792 <PeptideEvidenceRef peptideEvidence_ref="PepEv_102347_CIMKDCNYKQ_33"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1793 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-16"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1794 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="100"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1795 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="1.0204326E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1796 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="4.034076"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1797 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1798 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1799 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1800 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1801 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1802 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1803 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1230 experiment=2" spectraData_ref="SID_1" id="SIR_94">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1804 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="814.3682250976562" calculatedMassToCharge="814.3717041015625" peptide_ref="Pep_ALDARDDACELLDGHCCEKHVK" rank="1" passThreshold="true" id="SII_94_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1805 <PeptideEvidenceRef peptideEvidence_ref="PepEv_100235_ALDARDDACELLDGHCCEKHVK_324"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1806 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-29"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1807 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="136"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1808 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="1.03722596E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1809 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="4.289241"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1810 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1811 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1812 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1813 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1814 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1815 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1816 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1211 experiment=3" spectraData_ref="SID_1" id="SIR_47">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1817 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="507.2287902832031" calculatedMassToCharge="507.24029541015625" peptide_ref="Pep_FGYEEQSLGFSQK" rank="1" passThreshold="true" id="SII_47_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1818 <PeptideEvidenceRef peptideEvidence_ref="PepEv_94324_FGYEEQSLGFSQK_212"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1819 <PeptideEvidenceRef peptideEvidence_ref="PepEv_105665_FGYEEQSLGFSQK_213"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1820 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-23"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1821 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="65"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1822 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="1.0949449E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1823 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="4.383174"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1824 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1825 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1826 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1827 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1828 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1829 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1830 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1229 experiment=5" spectraData_ref="SID_1" id="SIR_93">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1831 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="633.7722778320312" calculatedMassToCharge="633.793212890625" peptide_ref="Pep_AQQCVCCVWVK" rank="1" passThreshold="true" id="SII_93_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1832 <PeptideEvidenceRef peptideEvidence_ref="PepEv_63770_AQQCVCCVWVK_745"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1833 <PeptideEvidenceRef peptideEvidence_ref="PepEv_64625_AQQCVCCVWVK_745"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1834 <PeptideEvidenceRef peptideEvidence_ref="PepEv_91892_AQQCVCCVWVK_745"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1835 <PeptideEvidenceRef peptideEvidence_ref="PepEv_92747_AQQCVCCVWVK_745"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1836 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-27"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1837 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="79"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1838 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="1.1053563E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1839 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="4.389038"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1840 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1841 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1842 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1843 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1844 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1845 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1846 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1211 experiment=2" spectraData_ref="SID_1" id="SIR_46">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1847 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="442.1819763183594" calculatedMassToCharge="442.1770324707031" peptide_ref="Pep_FFNPDDE" rank="1" passThreshold="true" id="SII_46_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1848 <PeptideEvidenceRef peptideEvidence_ref="PepEv_103572_FFNPDDE_492"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1849 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-13"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1850 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="63"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1851 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="1.1065043E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1852 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="4.306736"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1853 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1854 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1855 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1856 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1857 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1858 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1859 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1209 experiment=4" spectraData_ref="SID_1" id="SIR_41">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1860 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="481.1990051269531" calculatedMassToCharge="481.2167053222656" peptide_ref="Pep_HAAEEEIY" rank="1" passThreshold="true" id="SII_41_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1861 <PeptideEvidenceRef peptideEvidence_ref="PepEv_28260_HAAEEEIY_604"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1862 <PeptideEvidenceRef peptideEvidence_ref="PepEv_29076_HAAEEEIY_604"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1863 <PeptideEvidenceRef peptideEvidence_ref="PepEv_29888_HAAEEEIY_604"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1864 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-31"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1865 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="46"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1866 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="1.1874728E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1867 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="4.648006"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1868 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1869 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1870 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1871 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1872 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1873 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1874 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1215 experiment=2" spectraData_ref="SID_1" id="SIR_62">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1875 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="605.810546875" calculatedMassToCharge="605.3310546875" peptide_ref="Pep_MPPLIPAEVDK" rank="1" passThreshold="true" id="SII_62_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1876 <PeptideEvidenceRef peptideEvidence_ref="PepEv_15572_MPPLIPAEVDK_6068"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1877 <PeptideEvidenceRef peptideEvidence_ref="PepEv_21141_MPPLIPAEVDK_4026"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1878 <PeptideEvidenceRef peptideEvidence_ref="PepEv_42463_MPPLIPAEVDK_3950"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1879 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-26"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1880 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="45"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1881 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="1.2084616E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1882 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="4.7984385"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1883 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1884 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1885 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1886 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1887 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1888 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="605.810546875" calculatedMassToCharge="605.7979125976562" peptide_ref="Pep_QLAQKYNCDK" rank="2" passThreshold="true" id="SII_62_2">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1889 <PeptideEvidenceRef peptideEvidence_ref="PepEv_23958_QLAQKYNCDK_84"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1890 <PeptideEvidenceRef peptideEvidence_ref="PepEv_46423_QLAQKYNCDK_84"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1891 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-26"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1892 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="45"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1893 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="1.2084616E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1894 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="4.7774115"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1895 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1896 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1897 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1898 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1899 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1900 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="605.810546875" calculatedMassToCharge="605.2803955078125" peptide_ref="Pep_ESRELWNEF" rank="3" passThreshold="true" id="SII_62_3">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1901 <PeptideEvidenceRef peptideEvidence_ref="PepEv_69145_ESRELWNEF_3666"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1902 <PeptideEvidenceRef peptideEvidence_ref="PepEv_76686_ESRELWNEF_3596"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1903 <PeptideEvidenceRef peptideEvidence_ref="PepEv_98084_ESRELWNEF_3596"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1904 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-26"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1905 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="45"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1906 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="1.2084616E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1907 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="4.7545714"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1908 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1909 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1910 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1911 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1912 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1913 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1914 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1196 experiment=2" spectraData_ref="SID_1" id="SIR_15">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1915 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="409.1874694824219" calculatedMassToCharge="408.69232177734375" peptide_ref="Pep_YYKVDE" rank="1" passThreshold="true" id="SII_15_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1916 <PeptideEvidenceRef peptideEvidence_ref="PepEv_30156_YYKVDE_105"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1917 <PeptideEvidenceRef peptideEvidence_ref="PepEv_44955_YYKVDE_105"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1918 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-16"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1919 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="43"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1920 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="1.217629E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1921 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="4.709302"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1922 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1923 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1924 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1925 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1926 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1927 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1928 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1214 experiment=2" spectraData_ref="SID_1" id="SIR_58">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1929 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="510.2083740234375" calculatedMassToCharge="510.1940612792969" peptide_ref="Pep_MMSASSYNE" rank="1" passThreshold="true" id="SII_58_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1930 <PeptideEvidenceRef peptideEvidence_ref="PepEv_9232_MMSASSYNE_472"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1931 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-20"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1932 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="67"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1933 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="1.2431844E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1934 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="4.891185"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1935 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1936 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1937 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1938 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1939 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1940 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1941 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1188 experiment=3" spectraData_ref="SID_1" id="SIR_6">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1942 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="428.7035217285156" calculatedMassToCharge="428.210693359375" peptide_ref="Pep_LMHDPSR" rank="1" passThreshold="true" id="SII_6_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1943 <PeptideEvidenceRef peptideEvidence_ref="PepEv_72145_LMHDPSR_6666"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1944 <PeptideEvidenceRef peptideEvidence_ref="PepEv_77646_LMHDPSR_4556"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1945 <PeptideEvidenceRef peptideEvidence_ref="PepEv_99044_LMHDPSR_4556"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1946 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-16"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1947 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="93"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1948 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="1.4716851E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1949 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="5.7280927"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1950 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1951 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1952 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1953 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1954 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1955 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1956 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1221 experiment=2" spectraData_ref="SID_1" id="SIR_81">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1957 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="412.68389892578125" calculatedMassToCharge="412.1952209472656" peptide_ref="Pep_YDGLVEQ" rank="1" passThreshold="true" id="SII_81_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1958 <PeptideEvidenceRef peptideEvidence_ref="PepEv_71732_YDGLVEQ_6253"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1959 <PeptideEvidenceRef peptideEvidence_ref="PepEv_77233_YDGLVEQ_4143"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1960 <PeptideEvidenceRef peptideEvidence_ref="PepEv_98631_YDGLVEQ_4143"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1961 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-24"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1962 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="47"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1963 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="1.4825392E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1964 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="5.770339"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1965 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1966 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1967 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1968 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1969 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1970 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="412.68389892578125" calculatedMassToCharge="412.1976013183594" peptide_ref="Pep_RCYPER" rank="2" passThreshold="true" id="SII_81_2">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1971 <PeptideEvidenceRef peptideEvidence_ref="PepEv_105844_RCYPER_15"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1972 <PeptideEvidenceRef peptideEvidence_ref="PepEv_106564_RCYPER_15"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1973 <PeptideEvidenceRef peptideEvidence_ref="PepEv_110911_RCYPER_15"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1974 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-24"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1975 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="47"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1976 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="1.4825392E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1977 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="5.7338686"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1978 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1979 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1980 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1981 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1982 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1983 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1984 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1217 experiment=5" spectraData_ref="SID_1" id="SIR_72">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1985 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="476.6978454589844" calculatedMassToCharge="476.213623046875" peptide_ref="Pep_ARGCSEELS" rank="1" passThreshold="true" id="SII_72_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1986 <PeptideEvidenceRef peptideEvidence_ref="PepEv_7575_ARGCSEELS_525"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1987 <PeptideEvidenceRef peptideEvidence_ref="PepEv_8430_ARGCSEELS_525"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1988 <PeptideEvidenceRef peptideEvidence_ref="PepEv_35697_ARGCSEELS_525"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1989 <PeptideEvidenceRef peptideEvidence_ref="PepEv_36552_ARGCSEELS_525"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1990 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-25"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1991 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="35"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1992 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="1.4944564E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1993 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="5.8797894"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1994 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1995 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1996 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1997 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1998 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	1999 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2000 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1218 experiment=2" spectraData_ref="SID_1" id="SIR_73">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2001 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="577.770751953125" calculatedMassToCharge="577.791748046875" peptide_ref="Pep_AMFEELSSLK" rank="1" passThreshold="true" id="SII_73_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2002 <PeptideEvidenceRef peptideEvidence_ref="PepEv_61519_AMFEELSSLK_945"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2003 <PeptideEvidenceRef peptideEvidence_ref="PepEv_62771_AMFEELSSLK_944"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2004 <PeptideEvidenceRef peptideEvidence_ref="PepEv_90792_AMFEELSSLK_945"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2005 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-22"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2006 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="45"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2007 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="1.570459E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2008 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="6.2084956"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2009 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2010 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2011 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2012 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2013 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2014 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2015 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1238 experiment=2" spectraData_ref="SID_1" id="SIR_101">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2016 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="455.6540832519531" calculatedMassToCharge="455.3005065917969" peptide_ref="Pep_LIRRQRLRPR" rank="1" passThreshold="true" id="SII_101_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2017 <PeptideEvidenceRef peptideEvidence_ref="PepEv_36895_LIRRQRLRPR_13"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2018 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-35"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2019 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="25"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2020 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="1.6960995E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2021 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="6.70519"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2022 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2023 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2024 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2025 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2026 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2027 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2028 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1201 experiment=2" spectraData_ref="SID_1" id="SIR_24">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2029 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="440.1820373535156" calculatedMassToCharge="439.69287109375" peptide_ref="Pep_CDDQNKR" rank="1" passThreshold="true" id="SII_24_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2030 <PeptideEvidenceRef peptideEvidence_ref="PepEv_12435_CDDQNKR_2931"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2031 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-21"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2032 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="44"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2033 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="1.7229663E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2034 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="6.706129"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2035 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2036 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2037 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2038 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2039 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2040 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2041 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1210 experiment=3" spectraData_ref="SID_1" id="SIR_44">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2042 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="461.7162170410156" calculatedMassToCharge="461.7023620605469" peptide_ref="Pep_EACFAVEGP" rank="1" passThreshold="true" id="SII_44_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2043 <PeptideEvidenceRef peptideEvidence_ref="PepEv_44524_EACFAVEGP_588"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2044 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-18"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2045 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="59"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2046 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="1.7894078E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2047 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="7.040246"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2048 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2049 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2050 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2051 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2052 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2053 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2054 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1218 experiment=3" spectraData_ref="SID_1" id="SIR_74">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2055 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="471.2165222167969" calculatedMassToCharge="470.9001770019531" peptide_ref="Pep_SKEVSNLEFSDR" rank="1" passThreshold="true" id="SII_74_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2056 <PeptideEvidenceRef peptideEvidence_ref="PepEv_12758_SKEVSNLEFSDR_3254"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2057 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-27"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2058 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="57"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2059 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="1.8095516E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2060 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="7.215225"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2061 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2062 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2063 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2064 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2065 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2066 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2067 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1203 experiment=2" spectraData_ref="SID_1" id="SIR_29">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2068 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="533.7421264648438" calculatedMassToCharge="533.7360229492188" peptide_ref="Pep_EKTGNTSSDQ" rank="1" passThreshold="true" id="SII_29_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2069 <PeptideEvidenceRef peptideEvidence_ref="PepEv_63045_EKTGNTSSDQ_20"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2070 <PeptideEvidenceRef peptideEvidence_ref="PepEv_63900_EKTGNTSSDQ_20"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2071 <PeptideEvidenceRef peptideEvidence_ref="PepEv_91167_EKTGNTSSDQ_20"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2072 <PeptideEvidenceRef peptideEvidence_ref="PepEv_92022_EKTGNTSSDQ_20"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2073 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-24"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2074 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="87"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2075 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="1.9512225E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2076 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="7.7137675"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2077 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2078 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2079 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2080 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2081 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2082 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2083 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1200 experiment=3" spectraData_ref="SID_1" id="SIR_22">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2084 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="450.2027587890625" calculatedMassToCharge="449.8872985839844" peptide_ref="Pep_WGLDMERAGGQK" rank="1" passThreshold="true" id="SII_22_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2085 <PeptideEvidenceRef peptideEvidence_ref="PepEv_106237_WGLDMERAGGQK_408"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2086 <PeptideEvidenceRef peptideEvidence_ref="PepEv_106957_WGLDMERAGGQK_408"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2087 <PeptideEvidenceRef peptideEvidence_ref="PepEv_111304_WGLDMERAGGQK_408"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2088 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-22"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2089 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="55"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2090 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="2.0906812E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2091 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="8.336173"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2092 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2093 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2094 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2095 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2096 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2097 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2098 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1221 experiment=3" spectraData_ref="SID_1" id="SIR_82">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2099 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="684.796142578125" calculatedMassToCharge="684.8268432617188" peptide_ref="Pep_EGQMVEEKYQK" rank="1" passThreshold="true" id="SII_82_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2100 <PeptideEvidenceRef peptideEvidence_ref="PepEv_15510_EGQMVEEKYQK_6006"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2101 <PeptideEvidenceRef peptideEvidence_ref="PepEv_21079_EGQMVEEKYQK_3964"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2102 <PeptideEvidenceRef peptideEvidence_ref="PepEv_42401_EGQMVEEKYQK_3888"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2103 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-34"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2104 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="85"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2105 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="2.1989181E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2106 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="8.731244"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2107 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2108 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2109 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2110 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2111 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2112 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="684.796142578125" calculatedMassToCharge="684.2944946289062" peptide_ref="Pep_NTPDVMMSDTEK" rank="2" passThreshold="true" id="SII_82_2">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2113 <PeptideEvidenceRef peptideEvidence_ref="PepEv_105153_NTPDVMMSDTEK_801"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2114 <PeptideEvidenceRef peptideEvidence_ref="PepEv_108027_NTPDVMMSDTEK_801"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2115 <PeptideEvidenceRef peptideEvidence_ref="PepEv_109159_NTPDVMMSDTEK_801"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2116 <PeptideEvidenceRef peptideEvidence_ref="PepEv_110259_NTPDVMMSDTEK_801"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2117 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-34"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2118 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="85"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2119 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="2.1989181E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2120 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="8.767746"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2121 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2122 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2123 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2124 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2125 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2126 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2127 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1214 experiment=3" spectraData_ref="SID_1" id="SIR_59">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2128 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="493.2047424316406" calculatedMassToCharge="493.2185363769531" peptide_ref="Pep_KECGAHSEDAVCTK" rank="1" passThreshold="true" id="SII_59_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2129 <PeptideEvidenceRef peptideEvidence_ref="PepEv_100431_KECGAHSEDAVCTK_520"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2130 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-35"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2131 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="82"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2132 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="2.555741E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2133 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="10.270757"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2134 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2135 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2136 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2137 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2138 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2139 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2140 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1216 experiment=3" spectraData_ref="SID_1" id="SIR_66">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2141 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="501.203125" calculatedMassToCharge="501.2195739746094" peptide_ref="Pep_PDIGDPNWISGDSE" rank="1" passThreshold="true" id="SII_66_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2142 <PeptideEvidenceRef peptideEvidence_ref="PepEv_103294_PDIGDPNWISGDSE_214"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2143 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-26"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2144 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="54"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2145 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="3.082045E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2146 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="12.385815"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2147 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2148 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2149 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2150 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2151 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2152 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2153 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1199 experiment=2" spectraData_ref="SID_1" id="SIR_19">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2154 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="608.2568969726562" calculatedMassToCharge="608.2769775390625" peptide_ref="Pep_ELNPEEGQMVEEKYQ" rank="1" passThreshold="true" id="SII_19_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2155 <PeptideEvidenceRef peptideEvidence_ref="PepEv_15505_ELNPEEGQMVEEKYQ_6001"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2156 <PeptideEvidenceRef peptideEvidence_ref="PepEv_21074_ELNPEEGQMVEEKYQ_3959"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2157 <PeptideEvidenceRef peptideEvidence_ref="PepEv_42396_ELNPEEGQMVEEKYQ_3883"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2158 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-38"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2159 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="76"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2160 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="3.0840118E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2161 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="12.439979"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2162 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2163 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2164 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2165 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2166 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2167 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2168 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1201 experiment=4" spectraData_ref="SID_1" id="SIR_26">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2169 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="792.8330078125" calculatedMassToCharge="792.8681030273438" peptide_ref="Pep_NQDALTFFNSNQVS" rank="1" passThreshold="true" id="SII_26_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2170 <PeptideEvidenceRef peptideEvidence_ref="PepEv_12639_NQDALTFFNSNQVS_3135"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2171 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-57"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2172 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="70"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2173 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="3.212409E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2174 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="12.909707"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2175 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2176 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2177 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2178 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2179 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2180 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2181 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1197 experiment=2" spectraData_ref="SID_1" id="SIR_16">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2182 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="474.2104797363281" calculatedMassToCharge="473.8797912597656" peptide_ref="Pep_DERDAAAESYHR" rank="1" passThreshold="true" id="SII_16_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2183 <PeptideEvidenceRef peptideEvidence_ref="PepEv_103577_DERDAAAESYHR_497"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2184 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-34"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2185 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="58"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2186 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="3.288899E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2187 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="13.113828"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2188 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2189 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2190 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2191 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2192 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2193 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2194 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1214 experiment=4" spectraData_ref="SID_1" id="SIR_60">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2195 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="545.8875732421875" calculatedMassToCharge="545.56103515625" peptide_ref="Pep_NCNGSAACGLGYDFSR" rank="1" passThreshold="true" id="SII_60_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2196 <PeptideEvidenceRef peptideEvidence_ref="PepEv_48831_NCNGSAACGLGYDFSR_454"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2197 <PeptideEvidenceRef peptideEvidence_ref="PepEv_51737_NCNGSAACGLGYDFSR_486"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2198 <PeptideEvidenceRef peptideEvidence_ref="PepEv_52837_NCNGSAACGLGYDFSR_454"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2199 <PeptideEvidenceRef peptideEvidence_ref="PepEv_53937_NCNGSAACGLGYDFSR_454"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2200 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-12"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2201 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="120"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2202 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="3.4639085E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2203 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="14.023288"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2204 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2205 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2206 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2207 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2208 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2209 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="545.8875732421875" calculatedMassToCharge="545.5704956054688" peptide_ref="Pep_QSFGLSQEEYGFDGA" rank="2" passThreshold="true" id="SII_60_2">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2210 <PeptideEvidenceRef peptideEvidence_ref="PepEv_38290_QSFGLSQEEYGFDGA_153"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2211 <PeptideEvidenceRef peptideEvidence_ref="PepEv_49630_QSFGLSQEEYGFDGA_153"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2212 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-12"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2213 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="120"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2214 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="3.4639085E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2215 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="13.972368"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2216 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2217 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2218 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2219 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2220 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2221 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2222 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1213 experiment=2" spectraData_ref="SID_1" id="SIR_54">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2223 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="497.6971435546875" calculatedMassToCharge="497.7185363769531" peptide_ref="Pep_THKMYEAD" rank="1" passThreshold="true" id="SII_54_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2224 <PeptideEvidenceRef peptideEvidence_ref="PepEv_60680_THKMYEAD_106"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2225 <PeptideEvidenceRef peptideEvidence_ref="PepEv_61933_THKMYEAD_106"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2226 <PeptideEvidenceRef peptideEvidence_ref="PepEv_89953_THKMYEAD_106"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2227 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-28"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2228 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="49"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2229 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="3.6034102E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2230 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="14.104468"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2231 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2232 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2233 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2234 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2235 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2236 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2237 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1225 experiment=2" spectraData_ref="SID_1" id="SIR_87">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2238 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="550.7279052734375" calculatedMassToCharge="550.730224609375" peptide_ref="Pep_AEDEPEWPQ" rank="1" passThreshold="true" id="SII_87_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2239 <PeptideEvidenceRef peptideEvidence_ref="PepEv_7306_AEDEPEWPQ_256"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2240 <PeptideEvidenceRef peptideEvidence_ref="PepEv_8161_AEDEPEWPQ_256"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2241 <PeptideEvidenceRef peptideEvidence_ref="PepEv_35428_AEDEPEWPQ_256"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2242 <PeptideEvidenceRef peptideEvidence_ref="PepEv_36283_AEDEPEWPQ_256"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2243 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-39"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2244 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="46"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2245 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="3.8618056E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2246 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="15.193888"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2247 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2248 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2249 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2250 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2251 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2252 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2253 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1281 experiment=2" spectraData_ref="SID_1" id="SIR_103">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2254 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="591.745361328125" calculatedMassToCharge="591.767333984375" peptide_ref="Pep_TEGPTYETER" rank="1" passThreshold="true" id="SII_103_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2255 <PeptideEvidenceRef peptideEvidence_ref="PepEv_70817_TEGPTYETER_5338"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2256 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-40"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2257 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="54"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2258 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="4.2281268E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2259 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="16.715054"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2260 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2261 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2262 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2263 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2264 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2265 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2266 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1230 experiment=3" spectraData_ref="SID_1" id="SIR_95">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2267 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="613.2512817382812" calculatedMassToCharge="613.267333984375" peptide_ref="Pep_ASINPNNDSWDYALEE" rank="1" passThreshold="true" id="SII_95_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2268 <PeptideEvidenceRef peptideEvidence_ref="PepEv_72297_ASINPNNDSWDYALEE_6818"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2269 <PeptideEvidenceRef peptideEvidence_ref="PepEv_77796_ASINPNNDSWDYALEE_4706"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2270 <PeptideEvidenceRef peptideEvidence_ref="PepEv_99194_ASINPNNDSWDYALEE_4706"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2271 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-34"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2272 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="66"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2273 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="4.8350522E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2274 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="19.574224"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2275 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2276 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2277 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2278 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2279 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2280 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2281 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1218 experiment=5" spectraData_ref="SID_1" id="SIR_76">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2282 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="587.7717895507812" calculatedMassToCharge="587.2727661132812" peptide_ref="Pep_KQEESAEAGAPG" rank="1" passThreshold="true" id="SII_76_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2283 <PeptideEvidenceRef peptideEvidence_ref="PepEv_5042_KQEESAEAGAPG_443"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2284 <PeptideEvidenceRef peptideEvidence_ref="PepEv_6240_KQEESAEAGAPG_388"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2285 <PeptideEvidenceRef peptideEvidence_ref="PepEv_34362_KQEESAEAGAPG_490"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2286 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-31"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2287 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="52"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2288 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="4.938522E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2289 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="19.69137"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2290 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2291 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2292 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2293 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2294 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2295 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2296 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1201 experiment=3" spectraData_ref="SID_1" id="SIR_25">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2297 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="512.2169799804688" calculatedMassToCharge="512.2411499023438" peptide_ref="Pep_PFVCLECGR" rank="1" passThreshold="true" id="SII_25_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2298 <PeptideEvidenceRef peptideEvidence_ref="PepEv_632_PFVCLECGR_385"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2299 <PeptideEvidenceRef peptideEvidence_ref="PepEv_1249_PFVCLECGR_385"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2300 <PeptideEvidenceRef peptideEvidence_ref="PepEv_1866_PFVCLECGR_385"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2301 <PeptideEvidenceRef peptideEvidence_ref="PepEv_2482_PFVCLECGR_384"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2302 <PeptideEvidenceRef peptideEvidence_ref="PepEv_3079_PFVCLECGR_365"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2303 <PeptideEvidenceRef peptideEvidence_ref="PepEv_3668_PFVCLECGR_357"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2304 <PeptideEvidenceRef peptideEvidence_ref="PepEv_24388_PFVCLECGR_385"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2305 <PeptideEvidenceRef peptideEvidence_ref="PepEv_25005_PFVCLECGR_385"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2306 <PeptideEvidenceRef peptideEvidence_ref="PepEv_25622_PFVCLECGR_385"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2307 <PeptideEvidenceRef peptideEvidence_ref="PepEv_26238_PFVCLECGR_384"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2308 <PeptideEvidenceRef peptideEvidence_ref="PepEv_26835_PFVCLECGR_365"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2309 <PeptideEvidenceRef peptideEvidence_ref="PepEv_27424_PFVCLECGR_357"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2310 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-26"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2311 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="44"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2312 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="5.290015E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2313 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="20.813036"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2314 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2315 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2316 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2317 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2318 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2319 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2320 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1208 experiment=3" spectraData_ref="SID_1" id="SIR_38">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2321 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="490.20404052734375" calculatedMassToCharge="490.22198486328125" peptide_ref="Pep_ENLEQAFE" rank="1" passThreshold="true" id="SII_38_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2322 <PeptideEvidenceRef peptideEvidence_ref="PepEv_9833_ENLEQAFE_329"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2323 <PeptideEvidenceRef peptideEvidence_ref="PepEv_17444_ENLEQAFE_329"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2324 <PeptideEvidenceRef peptideEvidence_ref="PepEv_38766_ENLEQAFE_253"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2325 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-34"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2326 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="76"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2327 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="5.55107E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2328 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="21.727999"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2329 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2330 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2331 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2332 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2333 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2334 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2335 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1204 experiment=4" spectraData_ref="SID_1" id="SIR_33">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2336 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="464.1875305175781" calculatedMassToCharge="464.1719665527344" peptide_ref="Pep_WDFDEES" rank="1" passThreshold="true" id="SII_33_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2337 <PeptideEvidenceRef peptideEvidence_ref="PepEv_63479_WDFDEES_454"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2338 <PeptideEvidenceRef peptideEvidence_ref="PepEv_64334_WDFDEES_454"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2339 <PeptideEvidenceRef peptideEvidence_ref="PepEv_91601_WDFDEES_454"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2340 <PeptideEvidenceRef peptideEvidence_ref="PepEv_92456_WDFDEES_454"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2341 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-44"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2342 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="32"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2343 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="6.305883E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2344 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="24.543758"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2345 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2346 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2347 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2348 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2349 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2350 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="464.1875305175781" calculatedMassToCharge="463.68768310546875" peptide_ref="Pep_HYCGKCCL" rank="2" passThreshold="true" id="SII_33_2">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2351 <PeptideEvidenceRef peptideEvidence_ref="PepEv_30190_HYCGKCCL_139"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2352 <PeptideEvidenceRef peptideEvidence_ref="PepEv_44989_HYCGKCCL_139"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2353 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-44"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2354 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="32"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2355 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="6.305883E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2356 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="24.682487"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2357 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2358 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2359 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2360 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2361 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2362 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2363 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1208 experiment=2" spectraData_ref="SID_1" id="SIR_37">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2364 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="621.2553100585938" calculatedMassToCharge="621.2733154296875" peptide_ref="Pep_PPGAQGAEGGGSAEG" rank="1" passThreshold="true" id="SII_37_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2365 <PeptideEvidenceRef peptideEvidence_ref="PepEv_106201_PPGAQGAEGGGSAEG_372"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2366 <PeptideEvidenceRef peptideEvidence_ref="PepEv_106921_PPGAQGAEGGGSAEG_372"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2367 <PeptideEvidenceRef peptideEvidence_ref="PepEv_111268_PPGAQGAEGGGSAEG_372"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2368 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-40"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2369 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="77"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2370 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="6.3325354E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2371 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="25.543549"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2372 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2373 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2374 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2375 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2376 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2377 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2378 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1194 experiment=2" spectraData_ref="SID_1" id="SIR_14">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2379 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="452.1972351074219" calculatedMassToCharge="451.87249755859375" peptide_ref="Pep_NQQPSLDQAHES" rank="1" passThreshold="true" id="SII_14_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2380 <PeptideEvidenceRef peptideEvidence_ref="PepEv_69471_NQQPSLDQAHES_3992"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2381 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-42"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2382 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="59"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2383 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="7.1842485E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2384 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="28.645754"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2385 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2386 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2387 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2388 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2389 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2390 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2391 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1213 experiment=4" spectraData_ref="SID_1" id="SIR_56">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2392 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="413.6736755371094" calculatedMassToCharge="413.19049072265625" peptide_ref="Pep_EGDYVSR" rank="1" passThreshold="true" id="SII_56_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2393 <PeptideEvidenceRef peptideEvidence_ref="PepEv_84403_EGDYVSR_772"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2394 <PeptideEvidenceRef peptideEvidence_ref="PepEv_85215_EGDYVSR_768"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2395 <PeptideEvidenceRef peptideEvidence_ref="PepEv_85982_EGDYVSR_723"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2396 <PeptideEvidenceRef peptideEvidence_ref="PepEv_94068_EGDYVSR_583"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2397 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-33"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2398 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="43"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2399 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="8.442974E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2400 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="32.861744"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2401 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2402 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2403 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2404 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2405 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2406 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2407 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1200 experiment=2" spectraData_ref="SID_1" id="SIR_21">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2408 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="563.2123413085938" calculatedMassToCharge="563.2036743164062" peptide_ref="Pep_EEDASSCQEQ" rank="1" passThreshold="true" id="SII_21_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2409 <PeptideEvidenceRef peptideEvidence_ref="PepEv_13866_EEDASSCQEQ_4362"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2410 <PeptideEvidenceRef peptideEvidence_ref="PepEv_19435_EEDASSCQEQ_2320"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2411 <PeptideEvidenceRef peptideEvidence_ref="PepEv_40757_EEDASSCQEQ_2244"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2412 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-44"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2413 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="79"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2414 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="9.1590727E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2415 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="36.20856"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2416 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2417 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2418 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2419 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2420 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2421 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2422 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1183 experiment=2" spectraData_ref="SID_1" id="SIR_2">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2423 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="416.1649169921875" calculatedMassToCharge="416.161376953125" peptide_ref="Pep_DENYYQ" rank="1" passThreshold="true" id="SII_2_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2424 <PeptideEvidenceRef peptideEvidence_ref="PepEv_10076_DENYYQ_572"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2425 <PeptideEvidenceRef peptideEvidence_ref="PepEv_17687_DENYYQ_572"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2426 <PeptideEvidenceRef peptideEvidence_ref="PepEv_39009_DENYYQ_496"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2427 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-39"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2428 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="52"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2429 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="9.4161194E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2430 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="36.417786"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2431 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2432 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2433 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2434 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2435 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2436 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2437 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1211 experiment=4" spectraData_ref="SID_1" id="SIR_48">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2438 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="677.2626342773438" calculatedMassToCharge="676.7764892578125" peptide_ref="Pep_ESEGKGCSMEAPQ" rank="1" passThreshold="true" id="SII_48_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2439 <PeptideEvidenceRef peptideEvidence_ref="PepEv_70196_ESEGKGCSMEAPQ_4717"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2440 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-50"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2441 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="37"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2442 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="9.469715E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2443 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="37.908215"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2444 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2445 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2446 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2447 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2448 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2449 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2450 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1200 experiment=4" spectraData_ref="SID_1" id="SIR_23">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2451 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="554.2100219726562" calculatedMassToCharge="553.8985595703125" peptide_ref="Pep_GEVAFCAEKDDAACCK" rank="1" passThreshold="true" id="SII_23_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2452 <PeptideEvidenceRef peptideEvidence_ref="PepEv_99924_GEVAFCAEKDDAACCK_13"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2453 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-46"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2454 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="41"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2455 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="0.0010682538"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2456 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="43.247185"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2457 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2458 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2459 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2460 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2461 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2462 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2463 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1228 experiment=2" spectraData_ref="SID_1" id="SIR_88">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2464 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="500.6953125" calculatedMassToCharge="500.1941833496094" peptide_ref="Pep_MCNFHYQG" rank="1" passThreshold="true" id="SII_88_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2465 <PeptideEvidenceRef peptideEvidence_ref="PepEv_27723_MCNFHYQG_67"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2466 <PeptideEvidenceRef peptideEvidence_ref="PepEv_28539_MCNFHYQG_67"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2467 <PeptideEvidenceRef peptideEvidence_ref="PepEv_29351_MCNFHYQG_67"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2468 <PeptideEvidenceRef peptideEvidence_ref="PepEv_37577_MCNFHYQG_67"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2469 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-36"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2470 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="54"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2471 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="0.0011096081"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2472 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="43.43228"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2473 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2474 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2475 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2476 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2477 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2478 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2479 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1189 experiment=2" spectraData_ref="SID_1" id="SIR_7">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2480 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="409.6888122558594" calculatedMassToCharge="409.19061279296875" peptide_ref="Pep_HGRDWF" rank="1" passThreshold="true" id="SII_7_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2481 <PeptideEvidenceRef peptideEvidence_ref="PepEv_106035_HGRDWF_206"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2482 <PeptideEvidenceRef peptideEvidence_ref="PepEv_106755_HGRDWF_206"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2483 <PeptideEvidenceRef peptideEvidence_ref="PepEv_111102_HGRDWF_206"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2484 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-35"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2485 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="75"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2486 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="0.0011373081"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2487 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="43.986526"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2488 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2489 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2490 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2491 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2492 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2493 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2494 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1236 experiment=3" spectraData_ref="SID_1" id="SIR_100">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2495 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="673.7861938476562" calculatedMassToCharge="673.8184814453125" peptide_ref="Pep_EDLVPWIEDCK" rank="1" passThreshold="true" id="SII_100_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2496 <PeptideEvidenceRef peptideEvidence_ref="PepEv_14465_EDLVPWIEDCK_4961"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2497 <PeptideEvidenceRef peptideEvidence_ref="PepEv_20034_EDLVPWIEDCK_2919"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2498 <PeptideEvidenceRef peptideEvidence_ref="PepEv_41356_EDLVPWIEDCK_2843"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2499 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-52"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2500 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="56"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2501 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="0.0015187213"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2502 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="60.30387"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2503 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2504 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2505 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2506 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2507 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2508 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2509 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1198 experiment=2" spectraData_ref="SID_1" id="SIR_17">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2510 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="437.6932678222656" calculatedMassToCharge="437.692138671875" peptide_ref="Pep_MGHDRCR" rank="1" passThreshold="true" id="SII_17_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2511 <PeptideEvidenceRef peptideEvidence_ref="PepEv_87217_MGHDRCR_150"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2512 <PeptideEvidenceRef peptideEvidence_ref="PepEv_87986_MGHDRCR_150"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2513 <PeptideEvidenceRef peptideEvidence_ref="PepEv_88699_MGHDRCR_150"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2514 <PeptideEvidenceRef peptideEvidence_ref="PepEv_103789_MGHDRCR_150"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2515 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-41"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2516 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="55"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2517 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="0.0016426279"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2518 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="63.934364"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2519 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2520 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2521 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2522 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2523 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2524 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2525 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1186 experiment=2" spectraData_ref="SID_1" id="SIR_3">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2526 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="526.192138671875" calculatedMassToCharge="525.7091064453125" peptide_ref="Pep_EEEKEEEE" rank="1" passThreshold="true" id="SII_3_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2527 <PeptideEvidenceRef peptideEvidence_ref="PepEv_60889_EEEKEEEE_315"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2528 <PeptideEvidenceRef peptideEvidence_ref="PepEv_62142_EEEKEEEE_315"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2529 <PeptideEvidenceRef peptideEvidence_ref="PepEv_90162_EEEKEEEE_315"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2530 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-66"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2531 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="48"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2532 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="0.001955566"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2533 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="76.54477"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2534 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2535 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2536 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2537 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2538 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2539 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2540 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1216 experiment=4" spectraData_ref="SID_1" id="SIR_67">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2541 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="405.6540222167969" calculatedMassToCharge="405.1672058105469" peptide_ref="Pep_TGNTSSDQ" rank="1" passThreshold="true" id="SII_67_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2542 <PeptideEvidenceRef peptideEvidence_ref="PepEv_63047_TGNTSSDQ_22"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2543 <PeptideEvidenceRef peptideEvidence_ref="PepEv_63902_TGNTSSDQ_22"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2544 <PeptideEvidenceRef peptideEvidence_ref="PepEv_91169_TGNTSSDQ_22"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2545 <PeptideEvidenceRef peptideEvidence_ref="PepEv_92024_TGNTSSDQ_22"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2546 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-44"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2547 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="24"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2548 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="0.0019735042"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2549 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="77.246895"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2550 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2551 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2552 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2553 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2554 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2555 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2556 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1199 experiment=3" spectraData_ref="SID_1" id="SIR_20">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2557 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="495.1852722167969" calculatedMassToCharge="495.1980895996094" peptide_ref="Pep_YNCDKMIC" rank="1" passThreshold="true" id="SII_20_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2558 <PeptideEvidenceRef peptideEvidence_ref="PepEv_23963_YNCDKMIC_89"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2559 <PeptideEvidenceRef peptideEvidence_ref="PepEv_46428_YNCDKMIC_89"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2560 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-41"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2561 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="40"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2562 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="0.0025026577"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2563 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="97.95903"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2564 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2565 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2566 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2567 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2568 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2569 <SpectrumIdentificationItem chargeState="2" experimentalMassToCharge="495.1852722167969" calculatedMassToCharge="494.6878967285156" peptide_ref="Pep_CGDCKFNVC" rank="2" passThreshold="true" id="SII_20_2">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2570 <PeptideEvidenceRef peptideEvidence_ref="PepEv_7131_CGDCKFNVC_81"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2571 <PeptideEvidenceRef peptideEvidence_ref="PepEv_7986_CGDCKFNVC_81"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2572 <PeptideEvidenceRef peptideEvidence_ref="PepEv_35253_CGDCKFNVC_81"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2573 <PeptideEvidenceRef peptideEvidence_ref="PepEv_36108_CGDCKFNVC_81"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2574 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-41"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2575 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="40"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2576 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="0.0025026577"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2577 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="98.46456"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2578 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2579 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2580 <userParam name="IsotopeError" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2581 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2582 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2583 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2584 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1229 experiment=2" spectraData_ref="SID_1" id="SIR_90">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2585 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="522.6893920898438" calculatedMassToCharge="522.6652221679688" peptide_ref="Pep_PRALAVAVLCTLILL" rank="1" passThreshold="true" id="SII_90_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2586 <PeptideEvidenceRef peptideEvidence_ref="PepEv_79033_PRALAVAVLCTLILL_197"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2587 <PeptideEvidenceRef peptideEvidence_ref="PepEv_79240_PRALAVAVLCTLILL_190"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2588 <PeptideEvidenceRef peptideEvidence_ref="PepEv_79447_PRALAVAVLCTLILL_190"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2589 <PeptideEvidenceRef peptideEvidence_ref="PepEv_79654_PRALAVAVLCTLILL_190"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2590 <PeptideEvidenceRef peptideEvidence_ref="PepEv_79832_PRALAVAVLCTLILL_161"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2591 <PeptideEvidenceRef peptideEvidence_ref="PepEv_101180_PRALAVAVLCTLILL_198"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2592 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-53"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2593 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="65"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2594 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="0.0051770797"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2595 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="208.82787"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2596 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2597 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2598 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2599 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2600 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2601 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2602 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1188 experiment=2" spectraData_ref="SID_1" id="SIR_5">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2603 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="489.1662292480469" calculatedMassToCharge="489.1896667480469" peptide_ref="Pep_CTNFSSCWSDGKM" rank="1" passThreshold="true" id="SII_5_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2604 <PeptideEvidenceRef peptideEvidence_ref="PepEv_9796_CTNFSSCWSDGKM_292"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2605 <PeptideEvidenceRef peptideEvidence_ref="PepEv_17407_CTNFSSCWSDGKM_292"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2606 <PeptideEvidenceRef peptideEvidence_ref="PepEv_38729_CTNFSSCWSDGKM_216"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2607 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-61"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2608 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="64"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2609 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="0.0058590886"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2610 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="234.54517"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2611 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2612 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2613 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2614 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2615 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2616 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2617 </SpectrumIdentificationList>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2618 </AnalysisData>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2619 </DataCollection>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6 galaxyp parents: diff changeset	2620 </MzIdentML>

Mercurial > repos > galaxyp > msgfplus

annotate test-data/201208-378803-msgf_20161026-50ppm-semitryptic-no_mods.mzid @ 4:58f9cf0de6d4 draft