Mercurial > repos > galaxyp > msgfplus
annotate test-data/201208-378803-msgf_20161026-2mmu-tryptic-many_mods.mzid @ 3:b4ccaf21855d draft
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit 498437250b9fa438abd6865b7e9ba71298599ee7
author | galaxyp |
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date | Thu, 12 Jan 2017 15:25:02 -0500 |
parents | 058a2ab1d462 |
children | 09e0ae6f661b |
rev | line source |
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058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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1 <?xml version="1.0" encoding="UTF-8"?> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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2 <MzIdentML xmlns="http://psidev.info/psi/pi/mzIdentML/1.1" id="MS-GF+" version="1.1.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://psidev.info/psi/pi/mzIdentML/1.1 http://www.psidev.info/files/mzIdentML1.1.0.xsd" creationDate="2016-11-10T20:39:33"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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3 <cvList xmlns="http://psidev.info/psi/pi/mzIdentML/1.1"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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4 <cv fullName="PSI-MS" version="3.30.0" uri="https://raw.githubusercontent.com/HUPO-PSI/psi-ms-CV/master/psi-ms.obo" id="PSI-MS"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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5 <cv fullName="UNIMOD" uri="http://www.unimod.org/obo/unimod.obo" id="UNIMOD"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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6 <cv fullName="UNIT-ONTOLOGY" uri="https://raw.githubusercontent.com/bio-ontology-research-group/unit-ontology/master/unit.obo" id="UO"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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7 </cvList> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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8 <AnalysisSoftwareList xmlns="http://psidev.info/psi/pi/mzIdentML/1.1"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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9 <AnalysisSoftware version="Release (v2016.10.26)" id="ID_software" name="MS-GF+"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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10 <SoftwareName> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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11 <cvParam cvRef="PSI-MS" accession="MS:1002048" name="MS-GF+"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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12 </SoftwareName> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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13 </AnalysisSoftware> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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14 </AnalysisSoftwareList> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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15 <SequenceCollection xmlns="http://psidev.info/psi/pi/mzIdentML/1.1"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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16 <DBSequence length="206" searchDatabase_ref="SearchDB_1" accession="gi|528953238|ref|XP_005208082.1|" id="DBSeq23283"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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17 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi|528953238|ref|XP_005208082.1| PREDICTED: alpha-S1-casein isoform X3 [Bos taurus]"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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18 </DBSequence> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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19 <DBSequence length="206" searchDatabase_ref="SearchDB_1" accession="XXX_gi|528953238|ref|XP_005208082.1|" id="DBSeq79258"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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20 <DBSequence length="811" searchDatabase_ref="SearchDB_1" accession="XXX_gi|528968106|ref|XP_005212568.1|" id="DBSeq84448"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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21 <DBSequence length="811" searchDatabase_ref="SearchDB_1" accession="gi|528968106|ref|XP_005212568.1|" id="DBSeq28473"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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22 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi|528968106|ref|XP_005212568.1| PREDICTED: exocyst complex component 6B isoform X2 [Bos taurus]"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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23 </DBSequence> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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24 <DBSequence length="7610" searchDatabase_ref="SearchDB_1" accession="XXX_gi|528944676|ref|XP_005204734.1|" id="DBSeq65480"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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25 <DBSequence length="5498" searchDatabase_ref="SearchDB_1" accession="XXX_gi|528944678|ref|XP_005204735.1|" id="DBSeq73091"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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26 <DBSequence length="5422" searchDatabase_ref="SearchDB_1" accession="XXX_gi|219804516|ref|NP_001137332.1|" id="DBSeq94489"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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27 <DBSequence length="7610" searchDatabase_ref="SearchDB_1" accession="gi|528944676|ref|XP_005204734.1|" id="DBSeq9505"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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28 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi|528944676|ref|XP_005204734.1| PREDICTED: microtubule-actin cross-linking factor 1 isoform X1 [Bos taurus]"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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29 </DBSequence> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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30 <DBSequence length="5498" searchDatabase_ref="SearchDB_1" accession="gi|528944678|ref|XP_005204735.1|" id="DBSeq17116"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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31 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi|528944678|ref|XP_005204735.1| PREDICTED: microtubule-actin cross-linking factor 1 isoform X2 [Bos taurus]"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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32 </DBSequence> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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33 <DBSequence length="5422" searchDatabase_ref="SearchDB_1" accession="gi|219804516|ref|NP_001137332.1|" id="DBSeq38514"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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34 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi|219804516|ref|NP_001137332.1| microtubule-actin cross-linking factor 1 [Bos taurus]"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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35 </DBSequence> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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36 <DBSequence length="607" searchDatabase_ref="SearchDB_1" accession="gi|30794280|ref|NP_851335.1|" id="DBSeq43937"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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37 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi|30794280|ref|NP_851335.1| serum albumin precursor [Bos taurus]"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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38 </DBSequence> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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39 <DBSequence length="607" searchDatabase_ref="SearchDB_1" accession="XXX_gi|30794280|ref|NP_851335.1|" id="DBSeq99912"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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40 <DBSequence length="1099" searchDatabase_ref="SearchDB_1" accession="XXX_gi|358414198|ref|XP_002700672.2|" id="DBSeq104353"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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41 <DBSequence length="1131" searchDatabase_ref="SearchDB_1" accession="XXX_gi|528966552|ref|XP_005211956.1|" id="DBSeq107227"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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42 <DBSequence length="1099" searchDatabase_ref="SearchDB_1" accession="XXX_gi|528966554|ref|XP_005211957.1|" id="DBSeq108359"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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43 <DBSequence length="1099" searchDatabase_ref="SearchDB_1" accession="XXX_gi|297479727|ref|XP_002690982.1|" id="DBSeq109459"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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44 <DBSequence length="1099" searchDatabase_ref="SearchDB_1" accession="gi|358414198|ref|XP_002700672.2|" id="DBSeq48378"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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45 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi|358414198|ref|XP_002700672.2| PREDICTED: LOW QUALITY PROTEIN: solute carrier family 12 member 1 [Bos taurus]"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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46 </DBSequence> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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47 <DBSequence length="1131" searchDatabase_ref="SearchDB_1" accession="gi|528966552|ref|XP_005211956.1|" id="DBSeq51252"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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48 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi|528966552|ref|XP_005211956.1| PREDICTED: solute carrier family 12 member 1 isoform X2 [Bos taurus]"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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49 </DBSequence> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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50 <DBSequence length="1099" searchDatabase_ref="SearchDB_1" accession="gi|528966554|ref|XP_005211957.1|" id="DBSeq52384"> |
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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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51 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi|528966554|ref|XP_005211957.1| PREDICTED: solute carrier family 12 member 1 isoform X3 [Bos taurus]"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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52 </DBSequence> |
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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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53 <DBSequence length="1099" searchDatabase_ref="SearchDB_1" accession="gi|297479727|ref|XP_002690982.1|" id="DBSeq53484"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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54 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi|297479727|ref|XP_002690982.1| PREDICTED: solute carrier family 12 member 1 isoform X1 [Bos taurus]"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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55 </DBSequence> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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56 <DBSequence length="305" searchDatabase_ref="SearchDB_1" accession="XXX_gi|528995061|ref|XP_005220351.1|" id="DBSeq89236"/> |
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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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57 <DBSequence length="305" searchDatabase_ref="SearchDB_1" accession="XXX_gi|528995063|ref|XP_005220352.1|" id="DBSeq89542"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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58 <DBSequence length="305" searchDatabase_ref="SearchDB_1" accession="XXX_gi|27806505|ref|NP_776558.1|" id="DBSeq100520"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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59 <DBSequence length="690" searchDatabase_ref="SearchDB_1" accession="XXX_gi|329665078|ref|NP_001193236.1|" id="DBSeq101624"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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60 <DBSequence length="305" searchDatabase_ref="SearchDB_1" accession="gi|528995061|ref|XP_005220351.1|" id="DBSeq33261"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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61 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi|528995061|ref|XP_005220351.1| PREDICTED: polyubiquitin-B isoform X1 [Bos taurus]"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
62 </DBSequence> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
63 <DBSequence length="305" searchDatabase_ref="SearchDB_1" accession="gi|528995063|ref|XP_005220352.1|" id="DBSeq33567"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
64 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi|528995063|ref|XP_005220352.1| PREDICTED: polyubiquitin-B isoform X2 [Bos taurus]"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
65 </DBSequence> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
66 <DBSequence length="305" searchDatabase_ref="SearchDB_1" accession="gi|27806505|ref|NP_776558.1|" id="DBSeq44545"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
67 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi|27806505|ref|NP_776558.1| polyubiquitin-B [Bos taurus]"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
68 </DBSequence> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
69 <DBSequence length="690" searchDatabase_ref="SearchDB_1" accession="gi|329665078|ref|NP_001193236.1|" id="DBSeq45649"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
70 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi|329665078|ref|NP_001193236.1| polyubiquitin-C [Bos taurus]"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
71 </DBSequence> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
72 <DBSequence length="588" searchDatabase_ref="SearchDB_1" accession="gi|528908812|ref|XP_609847.5|" id="DBSeq3312"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
73 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi|528908812|ref|XP_609847.5| PREDICTED: zinc finger protein 169 isoform X6 [Bos taurus]"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
74 </DBSequence> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
75 <DBSequence length="588" searchDatabase_ref="SearchDB_1" accession="gi|528959657|ref|XP_002689899.2|" id="DBSeq27068"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
76 <cvParam cvRef="PSI-MS" accession="MS:1001088" name="protein description" value="gi|528959657|ref|XP_002689899.2| PREDICTED: zinc finger protein 169 isoform X1 [Bos taurus]"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
77 </DBSequence> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
78 <Peptide id="Pep_130--17128+16EAESISSSEQKHIQK"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
79 <PeptideSequence>QMEAESISSSEQKHIQK</PeptideSequence> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
80 <Modification location="0" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
81 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
82 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
83 <Modification location="0" monoisotopicMassDelta="-17.026549105"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
84 <cvParam cvRef="UNIMOD" accession="UNIMOD:28" name="Gln->pyro-Glu"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
85 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
86 <Modification location="2" monoisotopicMassDelta="15.99491463"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
87 <cvParam cvRef="UNIMOD" accession="UNIMOD:35" name="Oxidation"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
88 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
89 <Modification location="13" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
90 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
91 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
92 <Modification location="17" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
93 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
94 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
95 </Peptide> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
96 <Peptide id="Pep_130--17IHKQESSSISEAE128+16QK"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
97 <PeptideSequence>QIHKQESSSISEAEMQK</PeptideSequence> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
98 <Modification location="0" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
99 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
100 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
101 <Modification location="0" monoisotopicMassDelta="-17.026549105"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
102 <cvParam cvRef="UNIMOD" accession="UNIMOD:28" name="Gln->pyro-Glu"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
103 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
104 <Modification location="4" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
105 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
106 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
107 <Modification location="15" monoisotopicMassDelta="15.99491463"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
108 <cvParam cvRef="UNIMOD" accession="UNIMOD:35" name="Oxidation"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
109 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
110 <Modification location="17" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
111 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
112 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
113 </Peptide> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
114 <Peptide id="Pep_RFQAF128+16NNKRSTDK128+16K"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
115 <PeptideSequence>RFQAFMNNKRSTDKMK</PeptideSequence> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
116 <Modification location="0" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
117 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
118 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
119 <Modification location="6" monoisotopicMassDelta="15.99491463"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
120 <cvParam cvRef="UNIMOD" accession="UNIMOD:35" name="Oxidation"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
121 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
122 <Modification location="9" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
123 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
124 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
125 <Modification location="14" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
126 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
127 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
128 <Modification location="15" monoisotopicMassDelta="15.99491463"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
129 <cvParam cvRef="UNIMOD" accession="UNIMOD:35" name="Oxidation"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
130 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
131 <Modification location="16" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
132 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
133 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
134 </Peptide> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
135 <Peptide id="Pep_129+16KDTSRKNN128+16FAQFRK"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
136 <PeptideSequence>MKDTSRKNNMFAQFRK</PeptideSequence> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
137 <Modification location="0" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
138 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
139 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
140 <Modification location="1" monoisotopicMassDelta="15.99491463"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
141 <cvParam cvRef="UNIMOD" accession="UNIMOD:35" name="Oxidation"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
142 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
143 <Modification location="2" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
144 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
145 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
146 <Modification location="7" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
147 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
148 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
149 <Modification location="10" monoisotopicMassDelta="15.99491463"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
150 <cvParam cvRef="UNIMOD" accession="UNIMOD:35" name="Oxidation"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
151 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
152 <Modification location="16" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
153 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
154 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
155 </Peptide> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
156 <Peptide id="Pep_RDDLLRQLLK"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
157 <PeptideSequence>RDDLLRQLLK</PeptideSequence> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
158 <Modification location="0" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
159 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
160 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
161 <Modification location="10" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
162 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
163 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
164 </Peptide> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
165 <Peptide id="Pep_LLQRLLDDRK"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
166 <PeptideSequence>LLQRLLDDRK</PeptideSequence> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
167 <Modification location="0" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
168 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
169 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
170 <Modification location="10" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
171 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
172 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
173 </Peptide> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
174 <Peptide id="Pep_NE128+16A128+16CGSNVRQK"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
175 <PeptideSequence>NEMAMCGSNVRQK</PeptideSequence> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
176 <Modification location="0" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
177 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
178 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
179 <Modification location="3" monoisotopicMassDelta="15.99491463"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
180 <cvParam cvRef="UNIMOD" accession="UNIMOD:35" name="Oxidation"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
181 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
182 <Modification location="5" monoisotopicMassDelta="15.99491463"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
183 <cvParam cvRef="UNIMOD" accession="UNIMOD:35" name="Oxidation"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
184 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
185 <Modification location="6" monoisotopicMassDelta="57.021463735"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
186 <cvParam cvRef="UNIMOD" accession="UNIMOD:4" name="Carbamidomethyl"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
187 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
188 <Modification location="13" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
189 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
190 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
191 </Peptide> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
192 <Peptide id="Pep_QRVNSGC128+16A128+16ENK"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
193 <PeptideSequence>QRVNSGCMAMENK</PeptideSequence> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
194 <Modification location="0" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
195 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
196 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
197 <Modification location="7" monoisotopicMassDelta="57.021463735"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
198 <cvParam cvRef="UNIMOD" accession="UNIMOD:4" name="Carbamidomethyl"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
199 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
200 <Modification location="8" monoisotopicMassDelta="15.99491463"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
201 <cvParam cvRef="UNIMOD" accession="UNIMOD:35" name="Oxidation"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
202 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
203 <Modification location="10" monoisotopicMassDelta="15.99491463"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
204 <cvParam cvRef="UNIMOD" accession="UNIMOD:35" name="Oxidation"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
205 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
206 <Modification location="13" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
207 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
208 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
209 </Peptide> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
210 <Peptide id="Pep_130--17ESSSISEAE128+16QK"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
211 <PeptideSequence>QESSSISEAEMQK</PeptideSequence> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
212 <Modification location="0" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
213 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
214 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
215 <Modification location="0" monoisotopicMassDelta="-17.026549105"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
216 <cvParam cvRef="UNIMOD" accession="UNIMOD:28" name="Gln->pyro-Glu"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
217 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
218 <Modification location="11" monoisotopicMassDelta="15.99491463"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
219 <cvParam cvRef="UNIMOD" accession="UNIMOD:35" name="Oxidation"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
220 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
221 <Modification location="13" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
222 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
223 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
224 </Peptide> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
225 <Peptide id="Pep_130--17128+16EAESISSSEQK"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
226 <PeptideSequence>QMEAESISSSEQK</PeptideSequence> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
227 <Modification location="0" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
228 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
229 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
230 <Modification location="0" monoisotopicMassDelta="-17.026549105"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
231 <cvParam cvRef="UNIMOD" accession="UNIMOD:28" name="Gln->pyro-Glu"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
232 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
233 <Modification location="2" monoisotopicMassDelta="15.99491463"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
234 <cvParam cvRef="UNIMOD" accession="UNIMOD:35" name="Oxidation"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
235 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
236 <Modification location="13" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
237 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
238 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
239 </Peptide> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
240 <Peptide id="Pep_LQKVAHDLMEIEGEPAPDRK"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
241 <PeptideSequence>LQKVAHDLMEIEGEPAPDRK</PeptideSequence> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
242 <Modification location="0" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
243 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
244 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
245 <Modification location="3" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
246 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
247 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
248 <Modification location="20" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
249 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
250 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
251 </Peptide> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
252 <Peptide id="Pep_RDPAPEGEIEMLDHAVKQLK"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
253 <PeptideSequence>RDPAPEGEIEMLDHAVKQLK</PeptideSequence> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
254 <Modification location="0" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
255 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
256 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
257 <Modification location="17" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
258 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
259 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
260 <Modification location="20" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
261 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
262 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
263 </Peptide> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
264 <Peptide id="Pep_ECCDKPLLEK"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
265 <PeptideSequence>ECCDKPLLEK</PeptideSequence> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
266 <Modification location="0" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
267 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
268 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
269 <Modification location="2" monoisotopicMassDelta="57.021463735"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
270 <cvParam cvRef="UNIMOD" accession="UNIMOD:4" name="Carbamidomethyl"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
271 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
272 <Modification location="3" monoisotopicMassDelta="57.021463735"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
273 <cvParam cvRef="UNIMOD" accession="UNIMOD:4" name="Carbamidomethyl"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
274 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
275 <Modification location="5" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
276 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
277 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
278 <Modification location="10" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
279 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
280 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
281 </Peptide> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
282 <Peptide id="Pep_ELLPKDCCEK"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
283 <PeptideSequence>ELLPKDCCEK</PeptideSequence> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
284 <Modification location="0" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
285 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
286 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
287 <Modification location="5" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
288 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
289 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
290 <Modification location="7" monoisotopicMassDelta="57.021463735"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
291 <cvParam cvRef="UNIMOD" accession="UNIMOD:4" name="Carbamidomethyl"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
292 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
293 <Modification location="8" monoisotopicMassDelta="57.021463735"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
294 <cvParam cvRef="UNIMOD" accession="UNIMOD:4" name="Carbamidomethyl"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
295 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
296 <Modification location="10" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
297 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
298 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
299 </Peptide> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
300 <Peptide id="Pep_VASLRETYGD128+16ADCCEK"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
301 <PeptideSequence>VASLRETYGDMADCCEK</PeptideSequence> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
302 <Modification location="0" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
303 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
304 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
305 <Modification location="11" monoisotopicMassDelta="15.99491463"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
306 <cvParam cvRef="UNIMOD" accession="UNIMOD:35" name="Oxidation"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
307 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
308 <Modification location="14" monoisotopicMassDelta="57.021463735"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
309 <cvParam cvRef="UNIMOD" accession="UNIMOD:4" name="Carbamidomethyl"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
310 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
311 <Modification location="15" monoisotopicMassDelta="57.021463735"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
312 <cvParam cvRef="UNIMOD" accession="UNIMOD:4" name="Carbamidomethyl"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
313 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
314 <Modification location="17" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
315 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
316 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
317 </Peptide> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
318 <Peptide id="Pep_ECCDA128+16DGYTERLSAVK"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
319 <PeptideSequence>ECCDAMDGYTERLSAVK</PeptideSequence> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
320 <Modification location="0" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
321 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
322 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
323 <Modification location="2" monoisotopicMassDelta="57.021463735"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
324 <cvParam cvRef="UNIMOD" accession="UNIMOD:4" name="Carbamidomethyl"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
325 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
326 <Modification location="3" monoisotopicMassDelta="57.021463735"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
327 <cvParam cvRef="UNIMOD" accession="UNIMOD:4" name="Carbamidomethyl"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
328 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
329 <Modification location="6" monoisotopicMassDelta="15.99491463"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
330 <cvParam cvRef="UNIMOD" accession="UNIMOD:35" name="Oxidation"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
331 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
332 <Modification location="17" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
333 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
334 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
335 </Peptide> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
336 <Peptide id="Pep_LPQGYHPNDVEEEWGK"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
337 <PeptideSequence>LPQGYHPNDVEEEWGK</PeptideSequence> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
338 <Modification location="0" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
339 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
340 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
341 <Modification location="16" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
342 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
343 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
344 </Peptide> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
345 <Peptide id="Pep_GWEEEVDNPHYGQPLK"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
346 <PeptideSequence>GWEEEVDNPHYGQPLK</PeptideSequence> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
347 <Modification location="0" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
348 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
349 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
350 <Modification location="16" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
351 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
352 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
353 </Peptide> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
354 <Peptide id="Pep_ILWAQKKAMGSNMEKVCLK"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
355 <PeptideSequence>ILWAQKKAMGSNMEKVCLK</PeptideSequence> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
356 <Modification location="0" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
357 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
358 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
359 <Modification location="6" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
360 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
361 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
362 <Modification location="7" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
363 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
364 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
365 <Modification location="15" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
366 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
367 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
368 <Modification location="17" monoisotopicMassDelta="57.021463735"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
369 <cvParam cvRef="UNIMOD" accession="UNIMOD:4" name="Carbamidomethyl"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
370 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
371 <Modification location="19" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
372 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
373 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
374 </Peptide> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
375 <Peptide id="Pep_LCVKEMNSGMAKKQAWLIK"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
376 <PeptideSequence>LCVKEMNSGMAKKQAWLIK</PeptideSequence> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
377 <Modification location="0" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
378 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
379 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
380 <Modification location="2" monoisotopicMassDelta="57.021463735"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
381 <cvParam cvRef="UNIMOD" accession="UNIMOD:4" name="Carbamidomethyl"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
382 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
383 <Modification location="4" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
384 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
385 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
386 <Modification location="12" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
387 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
388 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
389 <Modification location="13" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
390 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
391 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
392 <Modification location="19" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
393 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
394 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
395 </Peptide> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
396 <Peptide id="Pep_S128+16ENEDKEETVAK"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
397 <PeptideSequence>SMENEDKEETVAK</PeptideSequence> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
398 <Modification location="0" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
399 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
400 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
401 <Modification location="2" monoisotopicMassDelta="15.99491463"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
402 <cvParam cvRef="UNIMOD" accession="UNIMOD:35" name="Oxidation"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
403 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
404 <Modification location="7" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
405 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
406 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
407 <Modification location="13" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
408 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
409 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
410 </Peptide> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
411 <Peptide id="Pep_AVTEEKDENE128+16SK"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
412 <PeptideSequence>AVTEEKDENEMSK</PeptideSequence> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
413 <Modification location="0" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
414 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
415 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
416 <Modification location="6" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
417 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
418 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
419 <Modification location="11" monoisotopicMassDelta="15.99491463"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
420 <cvParam cvRef="UNIMOD" accession="UNIMOD:35" name="Oxidation"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
421 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
422 <Modification location="13" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
423 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
424 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
425 </Peptide> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
426 <Peptide id="Pep_VFIQMGGRLRLVLHLTSEK"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
427 <PeptideSequence>VFIQMGGRLRLVLHLTSEK</PeptideSequence> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
428 <Modification location="0" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
429 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
430 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
431 <Modification location="19" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
432 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
433 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
434 </Peptide> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
435 <Peptide id="Pep_ESTLHLVLRLRGGMQIFVK"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
436 <PeptideSequence>ESTLHLVLRLRGGMQIFVK</PeptideSequence> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
437 <Modification location="0" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
438 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
439 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
440 <Modification location="19" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
441 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
442 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
443 </Peptide> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
444 <Peptide id="Pep_MAFRDVAVAFTQK"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
445 <PeptideSequence>MAFRDVAVAFTQK</PeptideSequence> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
446 <Modification location="0" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
447 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
448 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
449 <Modification location="13" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
450 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
451 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
452 </Peptide> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
453 <Peptide id="Pep_130--17TVEAYSAAVQSQLQWMK"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
454 <PeptideSequence>QTVEAYSAAVQSQLQWMK</PeptideSequence> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
455 <Modification location="0" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
456 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
457 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
458 <Modification location="0" monoisotopicMassDelta="-17.026549105"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
459 <cvParam cvRef="UNIMOD" accession="UNIMOD:28" name="Gln->pyro-Glu"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
460 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
461 <Modification location="18" monoisotopicMassDelta="144.102063"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
462 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
463 </Modification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
464 </Peptide> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
465 <PeptideEvidence dBSequence_ref="DBSeq23283" peptide_ref="Pep_130--17128+16EAESISSSEQKHIQK" start="74" end="90" pre="K" post="E" isDecoy="false" id="PepEv_23356_130--17128+16EAESISSSEQKHIQK_74"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
466 <PeptideEvidence dBSequence_ref="DBSeq79258" peptide_ref="Pep_130--17IHKQESSSISEAE128+16QK" start="118" end="134" pre="K" post="I" isDecoy="true" id="PepEv_79375_130--17IHKQESSSISEAE128+16QK_118"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
467 <PeptideEvidence dBSequence_ref="DBSeq84448" peptide_ref="Pep_RFQAF128+16NNKRSTDK128+16K" start="27" end="42" pre="K" post="E" isDecoy="true" id="PepEv_84474_RFQAF128+16NNKRSTDK128+16K_27"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
468 <PeptideEvidence dBSequence_ref="DBSeq28473" peptide_ref="Pep_129+16KDTSRKNN128+16FAQFRK" start="771" end="786" pre="K" post="N" isDecoy="false" id="PepEv_29243_129+16KDTSRKNN128+16FAQFRK_771"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
469 <PeptideEvidence dBSequence_ref="DBSeq65480" peptide_ref="Pep_RDDLLRQLLK" start="2171" end="2180" pre="K" post="Q" isDecoy="true" id="PepEv_67650_RDDLLRQLLK_2171"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
470 <PeptideEvidence dBSequence_ref="DBSeq73091" peptide_ref="Pep_RDDLLRQLLK" start="2101" end="2110" pre="K" post="Q" isDecoy="true" id="PepEv_75191_RDDLLRQLLK_2101"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
471 <PeptideEvidence dBSequence_ref="DBSeq94489" peptide_ref="Pep_RDDLLRQLLK" start="2101" end="2110" pre="K" post="Q" isDecoy="true" id="PepEv_96589_RDDLLRQLLK_2101"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
472 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_LLQRLLDDRK" start="5432" end="5441" pre="K" post="A" isDecoy="false" id="PepEv_14936_LLQRLLDDRK_5432"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
473 <PeptideEvidence dBSequence_ref="DBSeq17116" peptide_ref="Pep_LLQRLLDDRK" start="3390" end="3399" pre="K" post="A" isDecoy="false" id="PepEv_20505_LLQRLLDDRK_3390"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
474 <PeptideEvidence dBSequence_ref="DBSeq38514" peptide_ref="Pep_LLQRLLDDRK" start="3314" end="3323" pre="K" post="A" isDecoy="false" id="PepEv_41827_LLQRLLDDRK_3314"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
475 <PeptideEvidence dBSequence_ref="DBSeq65480" peptide_ref="Pep_NE128+16A128+16CGSNVRQK" start="2447" end="2459" pre="K" post="V" isDecoy="true" id="PepEv_67926_NE128+16A128+16CGSNVRQK_2447"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
476 <PeptideEvidence dBSequence_ref="DBSeq73091" peptide_ref="Pep_NE128+16A128+16CGSNVRQK" start="2377" end="2389" pre="K" post="V" isDecoy="true" id="PepEv_75467_NE128+16A128+16CGSNVRQK_2377"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
477 <PeptideEvidence dBSequence_ref="DBSeq94489" peptide_ref="Pep_NE128+16A128+16CGSNVRQK" start="2377" end="2389" pre="K" post="V" isDecoy="true" id="PepEv_96865_NE128+16A128+16CGSNVRQK_2377"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
478 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_QRVNSGC128+16A128+16ENK" start="5153" end="5165" pre="K" post="L" isDecoy="false" id="PepEv_14657_QRVNSGC128+16A128+16ENK_5153"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
479 <PeptideEvidence dBSequence_ref="DBSeq17116" peptide_ref="Pep_QRVNSGC128+16A128+16ENK" start="3111" end="3123" pre="K" post="L" isDecoy="false" id="PepEv_20226_QRVNSGC128+16A128+16ENK_3111"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
480 <PeptideEvidence dBSequence_ref="DBSeq38514" peptide_ref="Pep_QRVNSGC128+16A128+16ENK" start="3035" end="3047" pre="K" post="L" isDecoy="false" id="PepEv_41548_QRVNSGC128+16A128+16ENK_3035"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
481 <PeptideEvidence dBSequence_ref="DBSeq79258" peptide_ref="Pep_130--17ESSSISEAE128+16QK" start="122" end="134" pre="K" post="I" isDecoy="true" id="PepEv_79379_130--17ESSSISEAE128+16QK_122"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
482 <PeptideEvidence dBSequence_ref="DBSeq23283" peptide_ref="Pep_130--17128+16EAESISSSEQK" start="74" end="86" pre="K" post="H" isDecoy="false" id="PepEv_23356_130--17128+16EAESISSSEQK_74"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
483 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_LQKVAHDLMEIEGEPAPDRK" start="4104" end="4123" pre="K" post="H" isDecoy="false" id="PepEv_13608_LQKVAHDLMEIEGEPAPDRK_4104"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
484 <PeptideEvidence dBSequence_ref="DBSeq17116" peptide_ref="Pep_LQKVAHDLMEIEGEPAPDRK" start="2062" end="2081" pre="K" post="H" isDecoy="false" id="PepEv_19177_LQKVAHDLMEIEGEPAPDRK_2062"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
485 <PeptideEvidence dBSequence_ref="DBSeq38514" peptide_ref="Pep_LQKVAHDLMEIEGEPAPDRK" start="1986" end="2005" pre="K" post="H" isDecoy="false" id="PepEv_40499_LQKVAHDLMEIEGEPAPDRK_1986"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
486 <PeptideEvidence dBSequence_ref="DBSeq65480" peptide_ref="Pep_RDPAPEGEIEMLDHAVKQLK" start="3489" end="3508" pre="K" post="E" isDecoy="true" id="PepEv_68968_RDPAPEGEIEMLDHAVKQLK_3489"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
487 <PeptideEvidence dBSequence_ref="DBSeq73091" peptide_ref="Pep_RDPAPEGEIEMLDHAVKQLK" start="3419" end="3438" pre="K" post="E" isDecoy="true" id="PepEv_76509_RDPAPEGEIEMLDHAVKQLK_3419"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
488 <PeptideEvidence dBSequence_ref="DBSeq94489" peptide_ref="Pep_RDPAPEGEIEMLDHAVKQLK" start="3419" end="3438" pre="K" post="E" isDecoy="true" id="PepEv_97907_RDPAPEGEIEMLDHAVKQLK_3419"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
489 <PeptideEvidence dBSequence_ref="DBSeq43937" peptide_ref="Pep_ECCDKPLLEK" start="300" end="309" pre="K" post="S" isDecoy="false" id="PepEv_44236_ECCDKPLLEK_300"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
490 <PeptideEvidence dBSequence_ref="DBSeq99912" peptide_ref="Pep_ELLPKDCCEK" start="300" end="309" pre="K" post="L" isDecoy="true" id="PepEv_100211_ELLPKDCCEK_300"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
491 <PeptideEvidence dBSequence_ref="DBSeq43937" peptide_ref="Pep_VASLRETYGD128+16ADCCEK" start="101" end="117" pre="K" post="Q" isDecoy="false" id="PepEv_44037_VASLRETYGD128+16ADCCEK_101"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
492 <PeptideEvidence dBSequence_ref="DBSeq99912" peptide_ref="Pep_ECCDA128+16DGYTERLSAVK" start="492" end="508" pre="K" post="C" isDecoy="true" id="PepEv_100403_ECCDA128+16DGYTERLSAVK_492"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
493 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_LPQGYHPNDVEEEWGK" start="468" end="483" pre="K" post="L" isDecoy="false" id="PepEv_9972_LPQGYHPNDVEEEWGK_468"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
494 <PeptideEvidence dBSequence_ref="DBSeq17116" peptide_ref="Pep_LPQGYHPNDVEEEWGK" start="468" end="483" pre="K" post="L" isDecoy="false" id="PepEv_17583_LPQGYHPNDVEEEWGK_468"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
495 <PeptideEvidence dBSequence_ref="DBSeq38514" peptide_ref="Pep_LPQGYHPNDVEEEWGK" start="392" end="407" pre="K" post="L" isDecoy="false" id="PepEv_38905_LPQGYHPNDVEEEWGK_392"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
496 <PeptideEvidence dBSequence_ref="DBSeq65480" peptide_ref="Pep_GWEEEVDNPHYGQPLK" start="7129" end="7144" pre="K" post="I" isDecoy="true" id="PepEv_72608_GWEEEVDNPHYGQPLK_7129"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
497 <PeptideEvidence dBSequence_ref="DBSeq73091" peptide_ref="Pep_GWEEEVDNPHYGQPLK" start="5017" end="5032" pre="K" post="I" isDecoy="true" id="PepEv_78107_GWEEEVDNPHYGQPLK_5017"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
498 <PeptideEvidence dBSequence_ref="DBSeq94489" peptide_ref="Pep_GWEEEVDNPHYGQPLK" start="5017" end="5032" pre="K" post="I" isDecoy="true" id="PepEv_99505_GWEEEVDNPHYGQPLK_5017"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
499 <PeptideEvidence dBSequence_ref="DBSeq104353" peptide_ref="Pep_ILWAQKKAMGSNMEKVCLK" start="360" end="378" pre="K" post="R" isDecoy="true" id="PepEv_104712_ILWAQKKAMGSNMEKVCLK_360"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
500 <PeptideEvidence dBSequence_ref="DBSeq107227" peptide_ref="Pep_ILWAQKKAMGSNMEKVCLK" start="360" end="378" pre="K" post="R" isDecoy="true" id="PepEv_107586_ILWAQKKAMGSNMEKVCLK_360"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
501 <PeptideEvidence dBSequence_ref="DBSeq108359" peptide_ref="Pep_ILWAQKKAMGSNMEKVCLK" start="360" end="378" pre="K" post="R" isDecoy="true" id="PepEv_108718_ILWAQKKAMGSNMEKVCLK_360"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
502 <PeptideEvidence dBSequence_ref="DBSeq109459" peptide_ref="Pep_ILWAQKKAMGSNMEKVCLK" start="360" end="378" pre="K" post="R" isDecoy="true" id="PepEv_109818_ILWAQKKAMGSNMEKVCLK_360"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
503 <PeptideEvidence dBSequence_ref="DBSeq48378" peptide_ref="Pep_LCVKEMNSGMAKKQAWLIK" start="723" end="741" pre="K" post="N" isDecoy="false" id="PepEv_49100_LCVKEMNSGMAKKQAWLIK_723"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
504 <PeptideEvidence dBSequence_ref="DBSeq51252" peptide_ref="Pep_LCVKEMNSGMAKKQAWLIK" start="755" end="773" pre="K" post="N" isDecoy="false" id="PepEv_52006_LCVKEMNSGMAKKQAWLIK_755"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
505 <PeptideEvidence dBSequence_ref="DBSeq52384" peptide_ref="Pep_LCVKEMNSGMAKKQAWLIK" start="723" end="741" pre="K" post="N" isDecoy="false" id="PepEv_53106_LCVKEMNSGMAKKQAWLIK_723"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
506 <PeptideEvidence dBSequence_ref="DBSeq53484" peptide_ref="Pep_LCVKEMNSGMAKKQAWLIK" start="723" end="741" pre="K" post="N" isDecoy="false" id="PepEv_54206_LCVKEMNSGMAKKQAWLIK_723"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
507 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_S128+16ENEDKEETVAK" start="1113" end="1125" pre="K" post="M" isDecoy="false" id="PepEv_10617_S128+16ENEDKEETVAK_1113"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
508 <PeptideEvidence dBSequence_ref="DBSeq17116" peptide_ref="Pep_S128+16ENEDKEETVAK" start="1111" end="1123" pre="K" post="M" isDecoy="false" id="PepEv_18226_S128+16ENEDKEETVAK_1111"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
509 <PeptideEvidence dBSequence_ref="DBSeq38514" peptide_ref="Pep_S128+16ENEDKEETVAK" start="1035" end="1047" pre="K" post="M" isDecoy="false" id="PepEv_39548_S128+16ENEDKEETVAK_1035"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
510 <PeptideEvidence dBSequence_ref="DBSeq65480" peptide_ref="Pep_AVTEEKDENE128+16SK" start="6487" end="6499" pre="K" post="L" isDecoy="true" id="PepEv_71966_AVTEEKDENE128+16SK_6487"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
511 <PeptideEvidence dBSequence_ref="DBSeq73091" peptide_ref="Pep_AVTEEKDENE128+16SK" start="4377" end="4389" pre="K" post="L" isDecoy="true" id="PepEv_77467_AVTEEKDENE128+16SK_4377"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
512 <PeptideEvidence dBSequence_ref="DBSeq94489" peptide_ref="Pep_AVTEEKDENE128+16SK" start="4377" end="4389" pre="K" post="L" isDecoy="true" id="PepEv_98865_AVTEEKDENE128+16SK_4377"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
513 <PeptideEvidence dBSequence_ref="DBSeq89236" peptide_ref="Pep_VFIQMGGRLRLVLHLTSEK" start="73" end="91" pre="K" post="Q" isDecoy="true" id="PepEv_89308_VFIQMGGRLRLVLHLTSEK_73"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
514 <PeptideEvidence dBSequence_ref="DBSeq89236" peptide_ref="Pep_VFIQMGGRLRLVLHLTSEK" start="149" end="167" pre="K" post="Q" isDecoy="true" id="PepEv_89384_VFIQMGGRLRLVLHLTSEK_149"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
515 <PeptideEvidence dBSequence_ref="DBSeq89236" peptide_ref="Pep_VFIQMGGRLRLVLHLTSEK" start="225" end="243" pre="K" post="Q" isDecoy="true" id="PepEv_89460_VFIQMGGRLRLVLHLTSEK_225"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
516 <PeptideEvidence dBSequence_ref="DBSeq89542" peptide_ref="Pep_VFIQMGGRLRLVLHLTSEK" start="73" end="91" pre="K" post="Q" isDecoy="true" id="PepEv_89614_VFIQMGGRLRLVLHLTSEK_73"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
517 <PeptideEvidence dBSequence_ref="DBSeq89542" peptide_ref="Pep_VFIQMGGRLRLVLHLTSEK" start="149" end="167" pre="K" post="Q" isDecoy="true" id="PepEv_89690_VFIQMGGRLRLVLHLTSEK_149"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
518 <PeptideEvidence dBSequence_ref="DBSeq89542" peptide_ref="Pep_VFIQMGGRLRLVLHLTSEK" start="225" end="243" pre="K" post="Q" isDecoy="true" id="PepEv_89766_VFIQMGGRLRLVLHLTSEK_225"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
519 <PeptideEvidence dBSequence_ref="DBSeq100520" peptide_ref="Pep_VFIQMGGRLRLVLHLTSEK" start="73" end="91" pre="K" post="Q" isDecoy="true" id="PepEv_100592_VFIQMGGRLRLVLHLTSEK_73"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
520 <PeptideEvidence dBSequence_ref="DBSeq100520" peptide_ref="Pep_VFIQMGGRLRLVLHLTSEK" start="149" end="167" pre="K" post="Q" isDecoy="true" id="PepEv_100668_VFIQMGGRLRLVLHLTSEK_149"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
521 <PeptideEvidence dBSequence_ref="DBSeq100520" peptide_ref="Pep_VFIQMGGRLRLVLHLTSEK" start="225" end="243" pre="K" post="Q" isDecoy="true" id="PepEv_100744_VFIQMGGRLRLVLHLTSEK_225"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
522 <PeptideEvidence dBSequence_ref="DBSeq101624" peptide_ref="Pep_VFIQMGGRLRLVLHLTSEK" start="78" end="96" pre="K" post="Q" isDecoy="true" id="PepEv_101701_VFIQMGGRLRLVLHLTSEK_78"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
523 <PeptideEvidence dBSequence_ref="DBSeq101624" peptide_ref="Pep_VFIQMGGRLRLVLHLTSEK" start="154" end="172" pre="K" post="Q" isDecoy="true" id="PepEv_101777_VFIQMGGRLRLVLHLTSEK_154"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
524 <PeptideEvidence dBSequence_ref="DBSeq101624" peptide_ref="Pep_VFIQMGGRLRLVLHLTSEK" start="230" end="248" pre="K" post="Q" isDecoy="true" id="PepEv_101853_VFIQMGGRLRLVLHLTSEK_230"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
525 <PeptideEvidence dBSequence_ref="DBSeq101624" peptide_ref="Pep_VFIQMGGRLRLVLHLTSEK" start="306" end="324" pre="K" post="Q" isDecoy="true" id="PepEv_101929_VFIQMGGRLRLVLHLTSEK_306"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
526 <PeptideEvidence dBSequence_ref="DBSeq101624" peptide_ref="Pep_VFIQMGGRLRLVLHLTSEK" start="382" end="400" pre="K" post="Q" isDecoy="true" id="PepEv_102005_VFIQMGGRLRLVLHLTSEK_382"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
527 <PeptideEvidence dBSequence_ref="DBSeq101624" peptide_ref="Pep_VFIQMGGRLRLVLHLTSEK" start="458" end="476" pre="K" post="Q" isDecoy="true" id="PepEv_102081_VFIQMGGRLRLVLHLTSEK_458"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
528 <PeptideEvidence dBSequence_ref="DBSeq101624" peptide_ref="Pep_VFIQMGGRLRLVLHLTSEK" start="534" end="552" pre="K" post="Q" isDecoy="true" id="PepEv_102157_VFIQMGGRLRLVLHLTSEK_534"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
529 <PeptideEvidence dBSequence_ref="DBSeq101624" peptide_ref="Pep_VFIQMGGRLRLVLHLTSEK" start="610" end="628" pre="K" post="Q" isDecoy="true" id="PepEv_102233_VFIQMGGRLRLVLHLTSEK_610"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
530 <PeptideEvidence dBSequence_ref="DBSeq33261" peptide_ref="Pep_ESTLHLVLRLRGGMQIFVK" start="64" end="82" pre="K" post="T" isDecoy="false" id="PepEv_33324_ESTLHLVLRLRGGMQIFVK_64"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
531 <PeptideEvidence dBSequence_ref="DBSeq33261" peptide_ref="Pep_ESTLHLVLRLRGGMQIFVK" start="140" end="158" pre="K" post="T" isDecoy="false" id="PepEv_33400_ESTLHLVLRLRGGMQIFVK_140"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
532 <PeptideEvidence dBSequence_ref="DBSeq33261" peptide_ref="Pep_ESTLHLVLRLRGGMQIFVK" start="216" end="234" pre="K" post="T" isDecoy="false" id="PepEv_33476_ESTLHLVLRLRGGMQIFVK_216"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
533 <PeptideEvidence dBSequence_ref="DBSeq33567" peptide_ref="Pep_ESTLHLVLRLRGGMQIFVK" start="64" end="82" pre="K" post="T" isDecoy="false" id="PepEv_33630_ESTLHLVLRLRGGMQIFVK_64"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
534 <PeptideEvidence dBSequence_ref="DBSeq33567" peptide_ref="Pep_ESTLHLVLRLRGGMQIFVK" start="140" end="158" pre="K" post="T" isDecoy="false" id="PepEv_33706_ESTLHLVLRLRGGMQIFVK_140"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
535 <PeptideEvidence dBSequence_ref="DBSeq33567" peptide_ref="Pep_ESTLHLVLRLRGGMQIFVK" start="216" end="234" pre="K" post="T" isDecoy="false" id="PepEv_33782_ESTLHLVLRLRGGMQIFVK_216"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
536 <PeptideEvidence dBSequence_ref="DBSeq44545" peptide_ref="Pep_ESTLHLVLRLRGGMQIFVK" start="64" end="82" pre="K" post="T" isDecoy="false" id="PepEv_44608_ESTLHLVLRLRGGMQIFVK_64"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
537 <PeptideEvidence dBSequence_ref="DBSeq44545" peptide_ref="Pep_ESTLHLVLRLRGGMQIFVK" start="140" end="158" pre="K" post="T" isDecoy="false" id="PepEv_44684_ESTLHLVLRLRGGMQIFVK_140"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
538 <PeptideEvidence dBSequence_ref="DBSeq44545" peptide_ref="Pep_ESTLHLVLRLRGGMQIFVK" start="216" end="234" pre="K" post="T" isDecoy="false" id="PepEv_44760_ESTLHLVLRLRGGMQIFVK_216"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
539 <PeptideEvidence dBSequence_ref="DBSeq45649" peptide_ref="Pep_ESTLHLVLRLRGGMQIFVK" start="64" end="82" pre="K" post="T" isDecoy="false" id="PepEv_45712_ESTLHLVLRLRGGMQIFVK_64"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
540 <PeptideEvidence dBSequence_ref="DBSeq45649" peptide_ref="Pep_ESTLHLVLRLRGGMQIFVK" start="140" end="158" pre="K" post="T" isDecoy="false" id="PepEv_45788_ESTLHLVLRLRGGMQIFVK_140"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
541 <PeptideEvidence dBSequence_ref="DBSeq45649" peptide_ref="Pep_ESTLHLVLRLRGGMQIFVK" start="216" end="234" pre="K" post="T" isDecoy="false" id="PepEv_45864_ESTLHLVLRLRGGMQIFVK_216"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
542 <PeptideEvidence dBSequence_ref="DBSeq45649" peptide_ref="Pep_ESTLHLVLRLRGGMQIFVK" start="292" end="310" pre="K" post="T" isDecoy="false" id="PepEv_45940_ESTLHLVLRLRGGMQIFVK_292"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
543 <PeptideEvidence dBSequence_ref="DBSeq45649" peptide_ref="Pep_ESTLHLVLRLRGGMQIFVK" start="368" end="386" pre="K" post="T" isDecoy="false" id="PepEv_46016_ESTLHLVLRLRGGMQIFVK_368"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
544 <PeptideEvidence dBSequence_ref="DBSeq45649" peptide_ref="Pep_ESTLHLVLRLRGGMQIFVK" start="444" end="462" pre="K" post="T" isDecoy="false" id="PepEv_46092_ESTLHLVLRLRGGMQIFVK_444"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
545 <PeptideEvidence dBSequence_ref="DBSeq45649" peptide_ref="Pep_ESTLHLVLRLRGGMQIFVK" start="520" end="538" pre="K" post="T" isDecoy="false" id="PepEv_46168_ESTLHLVLRLRGGMQIFVK_520"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
546 <PeptideEvidence dBSequence_ref="DBSeq45649" peptide_ref="Pep_ESTLHLVLRLRGGMQIFVK" start="596" end="614" pre="K" post="T" isDecoy="false" id="PepEv_46244_ESTLHLVLRLRGGMQIFVK_596"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
547 <PeptideEvidence dBSequence_ref="DBSeq3312" peptide_ref="Pep_MAFRDVAVAFTQK" start="1" end="13" pre="-" post="E" isDecoy="false" id="PepEv_3312_MAFRDVAVAFTQK_1"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
548 <PeptideEvidence dBSequence_ref="DBSeq27068" peptide_ref="Pep_MAFRDVAVAFTQK" start="1" end="13" pre="-" post="E" isDecoy="false" id="PepEv_27068_MAFRDVAVAFTQK_1"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
549 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_130--17TVEAYSAAVQSQLQWMK" start="831" end="848" pre="K" post="Q" isDecoy="false" id="PepEv_10335_130--17TVEAYSAAVQSQLQWMK_831"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
550 <PeptideEvidence dBSequence_ref="DBSeq17116" peptide_ref="Pep_130--17TVEAYSAAVQSQLQWMK" start="831" end="848" pre="K" post="Q" isDecoy="false" id="PepEv_17946_130--17TVEAYSAAVQSQLQWMK_831"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
551 <PeptideEvidence dBSequence_ref="DBSeq38514" peptide_ref="Pep_130--17TVEAYSAAVQSQLQWMK" start="755" end="772" pre="K" post="Q" isDecoy="false" id="PepEv_39268_130--17TVEAYSAAVQSQLQWMK_755"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
552 </SequenceCollection> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
553 <AnalysisCollection xmlns="http://psidev.info/psi/pi/mzIdentML/1.1"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
554 <SpectrumIdentification spectrumIdentificationProtocol_ref="SearchProtocol_1" spectrumIdentificationList_ref="SI_LIST_1" id="SpecIdent_1"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
555 <InputSpectra spectraData_ref="SID_1"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
556 <SearchDatabaseRef searchDatabase_ref="SearchDB_1"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
557 </SpectrumIdentification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
558 </AnalysisCollection> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
559 <AnalysisProtocolCollection xmlns="http://psidev.info/psi/pi/mzIdentML/1.1"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
560 <SpectrumIdentificationProtocol analysisSoftware_ref="ID_software" id="SearchProtocol_1"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
561 <SearchType> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
562 <cvParam cvRef="PSI-MS" accession="MS:1001083" name="ms-ms search"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
563 </SearchType> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
564 <AdditionalSearchParams> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
565 <cvParam cvRef="PSI-MS" accession="MS:1001211" name="parent mass type mono"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
566 <cvParam cvRef="PSI-MS" accession="MS:1001256" name="fragment mass type mono"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
567 <userParam name="TargetDecoyApproach" value="true"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
568 <userParam name="MinIsotopeError" value="-1"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
569 <userParam name="MaxIsotopeError" value="0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
570 <userParam name="FragmentMethod" value="HCD"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
571 <userParam name="Instrument" value="QExactive"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
572 <userParam name="Protocol" value="iTRAQ"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
573 <userParam name="NumTolerableTermini" value="2"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
574 <userParam name="NumMatchesPerSpec" value="2"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
575 <userParam name="MaxNumModifications" value="2"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
576 <userParam name="MinPepLength" value="10"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
577 <userParam name="MaxPepLength" value="20"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
578 <userParam name="MinCharge" value="2"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
579 <userParam name="MaxCharge" value="6"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
580 <userParam name="ChargeCarrierMass" value="1.00727649"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
581 </AdditionalSearchParams> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
582 <ModificationParams> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
583 <SearchModification fixedMod="true" massDelta="57.021465" residues="C"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
584 <cvParam cvRef="UNIMOD" accession="UNIMOD:4" name="Carbamidomethyl"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
585 </SearchModification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
586 <SearchModification fixedMod="true" massDelta="144.10207" residues="."> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
587 <SpecificityRules> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
588 <cvParam cvRef="PSI-MS" accession="MS:1001189" name="modification specificity N-term"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
589 </SpecificityRules> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
590 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
591 </SearchModification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
592 <SearchModification fixedMod="true" massDelta="144.10207" residues="K"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
593 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
594 </SearchModification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
595 <SearchModification fixedMod="false" massDelta="15.994915" residues="M"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
596 <cvParam cvRef="UNIMOD" accession="UNIMOD:35" name="Oxidation"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
597 </SearchModification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
598 <SearchModification fixedMod="false" massDelta="-17.026548" residues="Q"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
599 <SpecificityRules> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
600 <cvParam cvRef="PSI-MS" accession="MS:1001189" name="modification specificity N-term"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
601 </SpecificityRules> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
602 <cvParam cvRef="UNIMOD" accession="UNIMOD:28" name="Gln->pyro-Glu"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
603 </SearchModification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
604 <SearchModification fixedMod="false" massDelta="-58.005478" residues="G"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
605 <SpecificityRules> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
606 <cvParam cvRef="PSI-MS" accession="MS:1001190" name="modification specificity C-term"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
607 </SpecificityRules> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
608 <cvParam cvRef="UNIMOD" accession="UNIMOD:822" name="Gly-loss+Amide"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
609 </SearchModification> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
610 </ModificationParams> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
611 <Enzymes> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
612 <Enzyme semiSpecific="false" missedCleavages="1000" id="LysC"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
613 <EnzymeName> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
614 <cvParam cvRef="PSI-MS" accession="MS:1001309" name="Lys-C"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
615 </EnzymeName> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
616 </Enzyme> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
617 </Enzymes> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
618 <ParentTolerance> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
619 <cvParam cvRef="PSI-MS" accession="MS:1001412" name="search tolerance plus value" value="0.02" unitAccession="UO:0000221" unitName="dalton" unitCvRef="UO"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
620 <cvParam cvRef="PSI-MS" accession="MS:1001413" name="search tolerance minus value" value="0.02" unitAccession="UO:0000221" unitName="dalton" unitCvRef="UO"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
621 </ParentTolerance> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
622 <Threshold> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
623 <cvParam cvRef="PSI-MS" accession="MS:1001494" name="no threshold"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
624 </Threshold> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
625 </SpectrumIdentificationProtocol> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
626 </AnalysisProtocolCollection> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
627 <DataCollection xmlns="http://psidev.info/psi/pi/mzIdentML/1.1"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
628 <Inputs> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
629 <SearchDatabase numDatabaseSequences="144" location="/private/tmp/tmp7jlHMg/job_working_directory/000/6/working/cow.protein.PRG2012-subset.fasta" id="SearchDB_1"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
630 <FileFormat> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
631 <cvParam cvRef="PSI-MS" accession="MS:1001348" name="FASTA format"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
632 </FileFormat> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
633 <DatabaseName> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
634 <userParam name="cow.protein.PRG2012-subset.fasta"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
635 </DatabaseName> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
636 <cvParam cvRef="PSI-MS" accession="MS:1001197" name="DB composition target+decoy"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
637 <cvParam cvRef="PSI-MS" accession="MS:1001283" name="decoy DB accession regexp" value="^XXX"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
638 <cvParam cvRef="PSI-MS" accession="MS:1001195" name="decoy DB type reverse"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
639 </SearchDatabase> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
640 <SpectraData location="/private/tmp/tmp7jlHMg/job_working_directory/000/6/working/201208-378803.mzML" id="SID_1" name="201208-378803.mzML"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
641 <FileFormat> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
642 <cvParam cvRef="PSI-MS" accession="MS:1000584" name="mzML file"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
643 </FileFormat> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
644 <SpectrumIDFormat> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
645 <cvParam cvRef="PSI-MS" accession="MS:1000770" name="WIFF nativeID format"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
646 </SpectrumIDFormat> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
647 </SpectraData> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
648 </Inputs> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
649 <AnalysisData> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
650 <SpectrumIdentificationList id="SI_LIST_1"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
651 <FragmentationTable> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
652 <Measure id="Measure_MZ"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
653 <cvParam cvRef="PSI-MS" accession="MS:1001225" name="product ion m/z" unitAccession="MS:1000040" unitName="m/z" unitCvRef="PSI-MS"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
654 </Measure> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
655 </FragmentationTable> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
656 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1212 experiment=4" spectraData_ref="SID_1" id="SIR_52"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
657 <SpectrumIdentificationItem chargeState="4" experimentalMassToCharge="598.3059692382812" calculatedMassToCharge="598.56005859375" peptide_ref="Pep_130--17128+16EAESISSSEQKHIQK" rank="1" passThreshold="true" id="SII_52_1"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
658 <PeptideEvidenceRef peptideEvidence_ref="PepEv_23356_130--17128+16EAESISSSEQKHIQK_74"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
659 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-18"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
660 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="68"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
661 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="3.735076E-5"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
662 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="1.5176361"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
663 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
664 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
665 <userParam name="IsotopeError" value="-1"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
666 <userParam name="AssumedDissociationMethod" value="HCD"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
667 <userParam name="ExplainedIonCurrentRatio" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
668 <userParam name="NTermIonCurrentRatio" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
669 <userParam name="CTermIonCurrentRatio" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
670 <userParam name="MS2IonCurrent" value="443.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
671 </SpectrumIdentificationItem> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
672 <SpectrumIdentificationItem chargeState="4" experimentalMassToCharge="598.3059692382812" calculatedMassToCharge="598.56005859375" peptide_ref="Pep_130--17IHKQESSSISEAE128+16QK" rank="2" passThreshold="true" id="SII_52_2"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
673 <PeptideEvidenceRef peptideEvidence_ref="PepEv_79375_130--17IHKQESSSISEAE128+16QK_118"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
674 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-23"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
675 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="68"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
676 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="1.1482805E-4"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
677 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="4.6656933"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
678 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
679 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
680 <userParam name="IsotopeError" value="-1"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
681 <userParam name="AssumedDissociationMethod" value="HCD"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
682 <userParam name="ExplainedIonCurrentRatio" value="0.004514673"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
683 <userParam name="NTermIonCurrentRatio" value="0.004514673"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
684 <userParam name="CTermIonCurrentRatio" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
685 <userParam name="MS2IonCurrent" value="443.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
686 <userParam name="NumMatchedMainIons" value="1"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
687 <userParam name="MeanErrorAll" value="6.2688584"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
688 <userParam name="StdevErrorAll" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
689 <userParam name="MeanErrorTop7" value="6.2688584"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
690 <userParam name="StdevErrorTop7" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
691 <userParam name="MeanRelErrorAll" value="6.2688584"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
692 <userParam name="StdevRelErrorAll" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
693 <userParam name="MeanRelErrorTop7" value="6.2688584"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
694 <userParam name="StdevRelErrorTop7" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
695 </SpectrumIdentificationItem> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
696 </SpectrumIdentificationResult> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
697 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1229 experiment=2" spectraData_ref="SID_1" id="SIR_90"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
698 <SpectrumIdentificationItem chargeState="5" experimentalMassToCharge="522.6893920898438" calculatedMassToCharge="522.8875732421875" peptide_ref="Pep_RFQAF128+16NNKRSTDK128+16K" rank="1" passThreshold="true" id="SII_90_1"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
699 <PeptideEvidenceRef peptideEvidence_ref="PepEv_84474_RFQAF128+16NNKRSTDK128+16K_27"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
700 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-20"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
701 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="69"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
702 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="4.725597E-5"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
703 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="1.9131106"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
704 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="0.5"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
705 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="0.5"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
706 <userParam name="IsotopeError" value="-1"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
707 <userParam name="AssumedDissociationMethod" value="HCD"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
708 <userParam name="ExplainedIonCurrentRatio" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
709 <userParam name="NTermIonCurrentRatio" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
710 <userParam name="CTermIonCurrentRatio" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
711 <userParam name="MS2IonCurrent" value="817.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
712 </SpectrumIdentificationItem> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
713 <SpectrumIdentificationItem chargeState="5" experimentalMassToCharge="522.6893920898438" calculatedMassToCharge="522.8875732421875" peptide_ref="Pep_129+16KDTSRKNN128+16FAQFRK" rank="2" passThreshold="true" id="SII_90_2"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
714 <PeptideEvidenceRef peptideEvidence_ref="PepEv_29243_129+16KDTSRKNN128+16FAQFRK_771"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
715 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-21"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
716 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="69"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
717 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="5.994706E-5"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
718 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="2.4268968"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
719 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="0.5"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
720 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="0.5"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
721 <userParam name="IsotopeError" value="-1"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
722 <userParam name="AssumedDissociationMethod" value="HCD"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
723 <userParam name="ExplainedIonCurrentRatio" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
724 <userParam name="NTermIonCurrentRatio" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
725 <userParam name="CTermIonCurrentRatio" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
726 <userParam name="MS2IonCurrent" value="817.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
727 </SpectrumIdentificationItem> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
728 </SpectrumIdentificationResult> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
729 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1214 experiment=5" spectraData_ref="SID_1" id="SIR_61"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
730 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="519.6590576171875" calculatedMassToCharge="519.994140625" peptide_ref="Pep_RDDLLRQLLK" rank="1" passThreshold="true" id="SII_61_1"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
731 <PeptideEvidenceRef peptideEvidence_ref="PepEv_67650_RDDLLRQLLK_2171"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
732 <PeptideEvidenceRef peptideEvidence_ref="PepEv_75191_RDDLLRQLLK_2101"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
733 <PeptideEvidenceRef peptideEvidence_ref="PepEv_96589_RDDLLRQLLK_2101"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
734 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-12"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
735 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="47"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
736 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="7.9344725E-5"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
737 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="3.1367352"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
738 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
739 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
740 <userParam name="IsotopeError" value="-1"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
741 <userParam name="AssumedDissociationMethod" value="HCD"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
742 <userParam name="ExplainedIonCurrentRatio" value="0.004137931"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
743 <userParam name="NTermIonCurrentRatio" value="0.004137931"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
744 <userParam name="CTermIonCurrentRatio" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
745 <userParam name="MS2IonCurrent" value="725.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
746 <userParam name="NumMatchedMainIons" value="1"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
747 <userParam name="MeanErrorAll" value="17.95661"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
748 <userParam name="StdevErrorAll" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
749 <userParam name="MeanErrorTop7" value="17.95661"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
750 <userParam name="StdevErrorTop7" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
751 <userParam name="MeanRelErrorAll" value="17.95661"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
752 <userParam name="StdevRelErrorAll" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
753 <userParam name="MeanRelErrorTop7" value="17.95661"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
754 <userParam name="StdevRelErrorTop7" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
755 </SpectrumIdentificationItem> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
756 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="519.6590576171875" calculatedMassToCharge="519.994140625" peptide_ref="Pep_LLQRLLDDRK" rank="2" passThreshold="true" id="SII_61_2"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
757 <PeptideEvidenceRef peptideEvidence_ref="PepEv_14936_LLQRLLDDRK_5432"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
758 <PeptideEvidenceRef peptideEvidence_ref="PepEv_20505_LLQRLLDDRK_3390"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
759 <PeptideEvidenceRef peptideEvidence_ref="PepEv_41827_LLQRLLDDRK_3314"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
760 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-23"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
761 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="47"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
762 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="8.972333E-4"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
763 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="35.470325"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
764 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
765 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
766 <userParam name="IsotopeError" value="-1"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
767 <userParam name="AssumedDissociationMethod" value="HCD"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
768 <userParam name="ExplainedIonCurrentRatio" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
769 <userParam name="NTermIonCurrentRatio" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
770 <userParam name="CTermIonCurrentRatio" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
771 <userParam name="MS2IonCurrent" value="725.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
772 </SpectrumIdentificationItem> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
773 </SpectrumIdentificationResult> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
774 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1210 experiment=3" spectraData_ref="SID_1" id="SIR_44"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
775 <SpectrumIdentificationItem chargeState="4" experimentalMassToCharge="461.7162170410156" calculatedMassToCharge="461.9718322753906" peptide_ref="Pep_NE128+16A128+16CGSNVRQK" rank="1" passThreshold="true" id="SII_44_1"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
776 <PeptideEvidenceRef peptideEvidence_ref="PepEv_67926_NE128+16A128+16CGSNVRQK_2447"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
777 <PeptideEvidenceRef peptideEvidence_ref="PepEv_75467_NE128+16A128+16CGSNVRQK_2377"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
778 <PeptideEvidenceRef peptideEvidence_ref="PepEv_96865_NE128+16A128+16CGSNVRQK_2377"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
779 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-17"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
780 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="57"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
781 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="1.6894571E-4"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
782 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="6.763066"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
783 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
784 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
785 <userParam name="IsotopeError" value="-1"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
786 <userParam name="AssumedDissociationMethod" value="HCD"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
787 <userParam name="ExplainedIonCurrentRatio" value="0.0044247787"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
788 <userParam name="NTermIonCurrentRatio" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
789 <userParam name="CTermIonCurrentRatio" value="0.0044247787"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
790 <userParam name="MS2IonCurrent" value="452.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
791 <userParam name="NumMatchedMainIons" value="1"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
792 <userParam name="MeanErrorAll" value="16.15865"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
793 <userParam name="StdevErrorAll" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
794 <userParam name="MeanErrorTop7" value="16.15865"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
795 <userParam name="StdevErrorTop7" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
796 <userParam name="MeanRelErrorAll" value="16.15865"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
797 <userParam name="StdevRelErrorAll" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
798 <userParam name="MeanRelErrorTop7" value="16.15865"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
799 <userParam name="StdevRelErrorTop7" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
800 </SpectrumIdentificationItem> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
801 <SpectrumIdentificationItem chargeState="4" experimentalMassToCharge="461.7162170410156" calculatedMassToCharge="461.9718322753906" peptide_ref="Pep_QRVNSGC128+16A128+16ENK" rank="2" passThreshold="true" id="SII_44_2"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
802 <PeptideEvidenceRef peptideEvidence_ref="PepEv_14657_QRVNSGC128+16A128+16ENK_5153"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
803 <PeptideEvidenceRef peptideEvidence_ref="PepEv_20226_QRVNSGC128+16A128+16ENK_3111"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
804 <PeptideEvidenceRef peptideEvidence_ref="PepEv_41548_QRVNSGC128+16A128+16ENK_3035"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
805 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-30"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
806 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="57"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
807 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="0.0018074971"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
808 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="72.35592"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
809 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
810 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
811 <userParam name="IsotopeError" value="-1"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
812 <userParam name="AssumedDissociationMethod" value="HCD"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
813 <userParam name="ExplainedIonCurrentRatio" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
814 <userParam name="NTermIonCurrentRatio" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
815 <userParam name="CTermIonCurrentRatio" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
816 <userParam name="MS2IonCurrent" value="452.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
817 </SpectrumIdentificationItem> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
818 </SpectrumIdentificationResult> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
819 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1191 experiment=2" spectraData_ref="SID_1" id="SIR_8"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
820 <SpectrumIdentificationItem chargeState="4" experimentalMassToCharge="435.7113037109375" calculatedMassToCharge="435.96044921875" peptide_ref="Pep_130--17ESSSISEAE128+16QK" rank="1" passThreshold="true" id="SII_8_1"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
821 <PeptideEvidenceRef peptideEvidence_ref="PepEv_79379_130--17ESSSISEAE128+16QK_122"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
822 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-28"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
823 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="40"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
824 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="1.7160356E-4"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
825 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="6.869462"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
826 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
827 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
828 <userParam name="IsotopeError" value="-1"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
829 <userParam name="AssumedDissociationMethod" value="HCD"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
830 <userParam name="ExplainedIonCurrentRatio" value="0.044554457"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
831 <userParam name="NTermIonCurrentRatio" value="0.03217822"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
832 <userParam name="CTermIonCurrentRatio" value="0.012376238"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
833 <userParam name="MS2IonCurrent" value="404.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
834 <userParam name="NumMatchedMainIons" value="2"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
835 <userParam name="MeanErrorAll" value="19.003765"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
836 <userParam name="StdevErrorAll" value="0.682242"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
837 <userParam name="MeanErrorTop7" value="19.003765"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
838 <userParam name="StdevErrorTop7" value="0.682242"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
839 <userParam name="MeanRelErrorAll" value="-19.003765"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
840 <userParam name="StdevRelErrorAll" value="0.682242"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
841 <userParam name="MeanRelErrorTop7" value="-19.003765"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
842 <userParam name="StdevRelErrorTop7" value="0.682242"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
843 </SpectrumIdentificationItem> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
844 <SpectrumIdentificationItem chargeState="4" experimentalMassToCharge="435.7113037109375" calculatedMassToCharge="435.96044921875" peptide_ref="Pep_130--17128+16EAESISSSEQK" rank="2" passThreshold="true" id="SII_8_2"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
845 <PeptideEvidenceRef peptideEvidence_ref="PepEv_23356_130--17128+16EAESISSSEQK_74"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
846 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-36"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
847 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="40"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
848 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="6.8353146E-4"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
849 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="27.362448"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
850 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
851 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
852 <userParam name="IsotopeError" value="-1"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
853 <userParam name="AssumedDissociationMethod" value="HCD"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
854 <userParam name="ExplainedIonCurrentRatio" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
855 <userParam name="NTermIonCurrentRatio" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
856 <userParam name="CTermIonCurrentRatio" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
857 <userParam name="MS2IonCurrent" value="404.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
858 </SpectrumIdentificationItem> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
859 </SpectrumIdentificationResult> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
860 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1209 experiment=2" spectraData_ref="SID_1" id="SIR_39"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
861 <SpectrumIdentificationItem chargeState="6" experimentalMassToCharge="452.254638671875" calculatedMassToCharge="452.25213623046875" peptide_ref="Pep_LQKVAHDLMEIEGEPAPDRK" rank="1" passThreshold="true" id="SII_39_1"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
862 <PeptideEvidenceRef peptideEvidence_ref="PepEv_13608_LQKVAHDLMEIEGEPAPDRK_4104"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
863 <PeptideEvidenceRef peptideEvidence_ref="PepEv_19177_LQKVAHDLMEIEGEPAPDRK_2062"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
864 <PeptideEvidenceRef peptideEvidence_ref="PepEv_40499_LQKVAHDLMEIEGEPAPDRK_1986"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
865 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-24"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
866 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="64"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
867 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="1.8168578E-4"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
868 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="7.461472"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
869 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
870 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
871 <userParam name="IsotopeError" value="0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
872 <userParam name="AssumedDissociationMethod" value="HCD"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
873 <userParam name="ExplainedIonCurrentRatio" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
874 <userParam name="NTermIonCurrentRatio" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
875 <userParam name="CTermIonCurrentRatio" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
876 <userParam name="MS2IonCurrent" value="1024.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
877 </SpectrumIdentificationItem> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
878 <SpectrumIdentificationItem chargeState="6" experimentalMassToCharge="452.254638671875" calculatedMassToCharge="452.25213623046875" peptide_ref="Pep_RDPAPEGEIEMLDHAVKQLK" rank="2" passThreshold="true" id="SII_39_2"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
879 <PeptideEvidenceRef peptideEvidence_ref="PepEv_68968_RDPAPEGEIEMLDHAVKQLK_3489"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
880 <PeptideEvidenceRef peptideEvidence_ref="PepEv_76509_RDPAPEGEIEMLDHAVKQLK_3419"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
881 <PeptideEvidenceRef peptideEvidence_ref="PepEv_97907_RDPAPEGEIEMLDHAVKQLK_3419"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
882 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-40"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
883 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="64"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
884 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="0.0029742222"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
885 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="122.14536"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
886 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
887 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
888 <userParam name="IsotopeError" value="0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
889 <userParam name="AssumedDissociationMethod" value="HCD"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
890 <userParam name="ExplainedIonCurrentRatio" value="0.001953125"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
891 <userParam name="NTermIonCurrentRatio" value="0.001953125"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
892 <userParam name="CTermIonCurrentRatio" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
893 <userParam name="MS2IonCurrent" value="1024.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
894 <userParam name="NumMatchedMainIons" value="1"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
895 <userParam name="MeanErrorAll" value="4.5456934"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
896 <userParam name="StdevErrorAll" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
897 <userParam name="MeanErrorTop7" value="4.5456934"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
898 <userParam name="StdevErrorTop7" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
899 <userParam name="MeanRelErrorAll" value="4.5456934"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
900 <userParam name="StdevRelErrorAll" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
901 <userParam name="MeanRelErrorTop7" value="4.5456934"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
902 <userParam name="StdevRelErrorTop7" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
903 </SpectrumIdentificationItem> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
904 </SpectrumIdentificationResult> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
905 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1213 experiment=5" spectraData_ref="SID_1" id="SIR_57"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
906 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="575.3018188476562" calculatedMassToCharge="575.3076171875" peptide_ref="Pep_ECCDKPLLEK" rank="1" passThreshold="true" id="SII_57_1"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
907 <PeptideEvidenceRef peptideEvidence_ref="PepEv_44236_ECCDKPLLEK_300"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
908 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-22"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
909 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="59"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
910 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="2.1942661E-4"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
911 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="8.674592"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
912 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
913 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
914 <userParam name="IsotopeError" value="0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
915 <userParam name="AssumedDissociationMethod" value="HCD"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
916 <userParam name="ExplainedIonCurrentRatio" value="0.0014619883"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
917 <userParam name="NTermIonCurrentRatio" value="0.0014619883"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
918 <userParam name="CTermIonCurrentRatio" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
919 <userParam name="MS2IonCurrent" value="684.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
920 <userParam name="NumMatchedMainIons" value="1"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
921 <userParam name="MeanErrorAll" value="12.832601"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
922 <userParam name="StdevErrorAll" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
923 <userParam name="MeanErrorTop7" value="12.832601"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
924 <userParam name="StdevErrorTop7" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
925 <userParam name="MeanRelErrorAll" value="12.832601"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
926 <userParam name="StdevRelErrorAll" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
927 <userParam name="MeanRelErrorTop7" value="12.832601"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
928 <userParam name="StdevRelErrorTop7" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
929 </SpectrumIdentificationItem> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
930 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="575.3018188476562" calculatedMassToCharge="575.3076171875" peptide_ref="Pep_ELLPKDCCEK" rank="2" passThreshold="true" id="SII_57_2"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
931 <PeptideEvidenceRef peptideEvidence_ref="PepEv_100211_ELLPKDCCEK_300"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
932 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-26"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
933 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="59"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
934 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="4.269645E-4"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
935 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="16.879189"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
936 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
937 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
938 <userParam name="IsotopeError" value="0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
939 <userParam name="AssumedDissociationMethod" value="HCD"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
940 <userParam name="ExplainedIonCurrentRatio" value="0.0058479533"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
941 <userParam name="NTermIonCurrentRatio" value="0.0058479533"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
942 <userParam name="CTermIonCurrentRatio" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
943 <userParam name="MS2IonCurrent" value="684.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
944 <userParam name="NumMatchedMainIons" value="1"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
945 <userParam name="MeanErrorAll" value="6.54115"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
946 <userParam name="StdevErrorAll" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
947 <userParam name="MeanErrorTop7" value="6.54115"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
948 <userParam name="StdevErrorTop7" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
949 <userParam name="MeanRelErrorAll" value="-6.54115"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
950 <userParam name="StdevRelErrorAll" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
951 <userParam name="MeanRelErrorTop7" value="-6.54115"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
952 <userParam name="StdevRelErrorTop7" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
953 </SpectrumIdentificationItem> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
954 </SpectrumIdentificationResult> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
955 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1218 experiment=2" spectraData_ref="SID_1" id="SIR_73"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
956 <SpectrumIdentificationItem chargeState="4" experimentalMassToCharge="577.770751953125" calculatedMassToCharge="578.0166625976562" peptide_ref="Pep_VASLRETYGD128+16ADCCEK" rank="1" passThreshold="true" id="SII_73_1"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
957 <PeptideEvidenceRef peptideEvidence_ref="PepEv_44037_VASLRETYGD128+16ADCCEK_101"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
958 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-24"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
959 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="78"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
960 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="3.0161935E-4"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
961 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="12.255397"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
962 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
963 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
964 <userParam name="IsotopeError" value="-1"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
965 <userParam name="AssumedDissociationMethod" value="HCD"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
966 <userParam name="ExplainedIonCurrentRatio" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
967 <userParam name="NTermIonCurrentRatio" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
968 <userParam name="CTermIonCurrentRatio" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
969 <userParam name="MS2IonCurrent" value="939.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
970 </SpectrumIdentificationItem> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
971 <SpectrumIdentificationItem chargeState="4" experimentalMassToCharge="577.770751953125" calculatedMassToCharge="578.0166625976562" peptide_ref="Pep_ECCDA128+16DGYTERLSAVK" rank="2" passThreshold="true" id="SII_73_2"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
972 <PeptideEvidenceRef peptideEvidence_ref="PepEv_100403_ECCDA128+16DGYTERLSAVK_492"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
973 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-40"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
974 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="78"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
975 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="0.0042000134"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
976 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="170.65494"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
977 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
978 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
979 <userParam name="IsotopeError" value="-1"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
980 <userParam name="AssumedDissociationMethod" value="HCD"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
981 <userParam name="ExplainedIonCurrentRatio" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
982 <userParam name="NTermIonCurrentRatio" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
983 <userParam name="CTermIonCurrentRatio" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
984 <userParam name="MS2IonCurrent" value="939.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
985 </SpectrumIdentificationItem> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
986 </SpectrumIdentificationResult> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
987 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1213 experiment=3" spectraData_ref="SID_1" id="SIR_55"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
988 <SpectrumIdentificationItem chargeState="4" experimentalMassToCharge="547.2749633789062" calculatedMassToCharge="547.2743530273438" peptide_ref="Pep_LPQGYHPNDVEEEWGK" rank="1" passThreshold="true" id="SII_55_1"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
989 <PeptideEvidenceRef peptideEvidence_ref="PepEv_9972_LPQGYHPNDVEEEWGK_468"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
990 <PeptideEvidenceRef peptideEvidence_ref="PepEv_17583_LPQGYHPNDVEEEWGK_468"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
991 <PeptideEvidenceRef peptideEvidence_ref="PepEv_38905_LPQGYHPNDVEEEWGK_392"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
992 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-24"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
993 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="71"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
994 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="3.7047637E-4"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
995 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="14.998364"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
996 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
997 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
998 <userParam name="IsotopeError" value="0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
999 <userParam name="AssumedDissociationMethod" value="HCD"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1000 <userParam name="ExplainedIonCurrentRatio" value="0.0031120332"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1001 <userParam name="NTermIonCurrentRatio" value="0.0031120332"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1002 <userParam name="CTermIonCurrentRatio" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1003 <userParam name="MS2IonCurrent" value="964.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1004 <userParam name="NumMatchedMainIons" value="1"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1005 <userParam name="MeanErrorAll" value="19.94787"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1006 <userParam name="StdevErrorAll" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1007 <userParam name="MeanErrorTop7" value="19.94787"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1008 <userParam name="StdevErrorTop7" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1009 <userParam name="MeanRelErrorAll" value="-19.94787"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1010 <userParam name="StdevRelErrorAll" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1011 <userParam name="MeanRelErrorTop7" value="-19.94787"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1012 <userParam name="StdevRelErrorTop7" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1013 </SpectrumIdentificationItem> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1014 <SpectrumIdentificationItem chargeState="4" experimentalMassToCharge="547.2749633789062" calculatedMassToCharge="547.2743530273438" peptide_ref="Pep_GWEEEVDNPHYGQPLK" rank="2" passThreshold="true" id="SII_55_2"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1015 <PeptideEvidenceRef peptideEvidence_ref="PepEv_72608_GWEEEVDNPHYGQPLK_7129"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1016 <PeptideEvidenceRef peptideEvidence_ref="PepEv_78107_GWEEEVDNPHYGQPLK_5017"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1017 <PeptideEvidenceRef peptideEvidence_ref="PepEv_99505_GWEEEVDNPHYGQPLK_5017"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1018 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-38"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1019 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="71"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1020 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="0.003828229"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1021 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="154.98203"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1022 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1023 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1024 <userParam name="IsotopeError" value="0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1025 <userParam name="AssumedDissociationMethod" value="HCD"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1026 <userParam name="ExplainedIonCurrentRatio" value="0.0031120332"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1027 <userParam name="NTermIonCurrentRatio" value="0.0031120332"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1028 <userParam name="CTermIonCurrentRatio" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1029 <userParam name="MS2IonCurrent" value="964.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1030 <userParam name="NumMatchedMainIons" value="1"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1031 <userParam name="MeanErrorAll" value="13.475464"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1032 <userParam name="StdevErrorAll" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1033 <userParam name="MeanErrorTop7" value="13.475464"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1034 <userParam name="StdevErrorTop7" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1035 <userParam name="MeanRelErrorAll" value="-13.475464"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1036 <userParam name="StdevRelErrorAll" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1037 <userParam name="MeanRelErrorTop7" value="-13.475464"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1038 <userParam name="StdevRelErrorTop7" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1039 </SpectrumIdentificationItem> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1040 </SpectrumIdentificationResult> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1041 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1281 experiment=2" spectraData_ref="SID_1" id="SIR_103"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1042 <SpectrumIdentificationItem chargeState="5" experimentalMassToCharge="591.745361328125" calculatedMassToCharge="591.944091796875" peptide_ref="Pep_ILWAQKKAMGSNMEKVCLK" rank="1" passThreshold="true" id="SII_103_1"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1043 <PeptideEvidenceRef peptideEvidence_ref="PepEv_104712_ILWAQKKAMGSNMEKVCLK_360"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1044 <PeptideEvidenceRef peptideEvidence_ref="PepEv_107586_ILWAQKKAMGSNMEKVCLK_360"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1045 <PeptideEvidenceRef peptideEvidence_ref="PepEv_108718_ILWAQKKAMGSNMEKVCLK_360"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1046 <PeptideEvidenceRef peptideEvidence_ref="PepEv_109818_ILWAQKKAMGSNMEKVCLK_360"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1047 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-35"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1048 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="107"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1049 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="6.732259E-4"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1050 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="27.551098"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1051 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1052 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1053 <userParam name="IsotopeError" value="-1"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1054 <userParam name="AssumedDissociationMethod" value="HCD"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1055 <userParam name="ExplainedIonCurrentRatio" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1056 <userParam name="NTermIonCurrentRatio" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1057 <userParam name="CTermIonCurrentRatio" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1058 <userParam name="MS2IonCurrent" value="571.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1059 </SpectrumIdentificationItem> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1060 <SpectrumIdentificationItem chargeState="5" experimentalMassToCharge="591.745361328125" calculatedMassToCharge="591.944091796875" peptide_ref="Pep_LCVKEMNSGMAKKQAWLIK" rank="2" passThreshold="true" id="SII_103_2"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1061 <PeptideEvidenceRef peptideEvidence_ref="PepEv_49100_LCVKEMNSGMAKKQAWLIK_723"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1062 <PeptideEvidenceRef peptideEvidence_ref="PepEv_52006_LCVKEMNSGMAKKQAWLIK_755"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1063 <PeptideEvidenceRef peptideEvidence_ref="PepEv_53106_LCVKEMNSGMAKKQAWLIK_723"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1064 <PeptideEvidenceRef peptideEvidence_ref="PepEv_54206_LCVKEMNSGMAKKQAWLIK_723"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1065 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-40"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1066 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="107"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1067 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="0.0014232383"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1068 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="58.244606"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1069 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1070 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1071 <userParam name="IsotopeError" value="-1"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1072 <userParam name="AssumedDissociationMethod" value="HCD"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1073 <userParam name="ExplainedIonCurrentRatio" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1074 <userParam name="NTermIonCurrentRatio" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1075 <userParam name="CTermIonCurrentRatio" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1076 <userParam name="MS2IonCurrent" value="571.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1077 </SpectrumIdentificationItem> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1078 </SpectrumIdentificationResult> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1079 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1231 experiment=2" spectraData_ref="SID_1" id="SIR_96"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1080 <SpectrumIdentificationItem chargeState="4" experimentalMassToCharge="490.2488098144531" calculatedMassToCharge="490.2491760253906" peptide_ref="Pep_S128+16ENEDKEETVAK" rank="1" passThreshold="true" id="SII_96_1"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1081 <PeptideEvidenceRef peptideEvidence_ref="PepEv_10617_S128+16ENEDKEETVAK_1113"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1082 <PeptideEvidenceRef peptideEvidence_ref="PepEv_18226_S128+16ENEDKEETVAK_1111"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1083 <PeptideEvidenceRef peptideEvidence_ref="PepEv_39548_S128+16ENEDKEETVAK_1035"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1084 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-26"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1085 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="72"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1086 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="6.884119E-4"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1087 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="27.557816"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1088 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1089 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1090 <userParam name="IsotopeError" value="0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1091 <userParam name="AssumedDissociationMethod" value="HCD"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1092 <userParam name="ExplainedIonCurrentRatio" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1093 <userParam name="NTermIonCurrentRatio" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1094 <userParam name="CTermIonCurrentRatio" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1095 <userParam name="MS2IonCurrent" value="611.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1096 </SpectrumIdentificationItem> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1097 <SpectrumIdentificationItem chargeState="4" experimentalMassToCharge="490.2488098144531" calculatedMassToCharge="490.2491760253906" peptide_ref="Pep_AVTEEKDENE128+16SK" rank="2" passThreshold="true" id="SII_96_2"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1098 <PeptideEvidenceRef peptideEvidence_ref="PepEv_71966_AVTEEKDENE128+16SK_6487"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1099 <PeptideEvidenceRef peptideEvidence_ref="PepEv_77467_AVTEEKDENE128+16SK_4377"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1100 <PeptideEvidenceRef peptideEvidence_ref="PepEv_98865_AVTEEKDENE128+16SK_4377"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1101 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-32"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1102 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="72"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1103 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="0.0018720039"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1104 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="74.93819"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1105 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1106 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1107 <userParam name="IsotopeError" value="0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1108 <userParam name="AssumedDissociationMethod" value="HCD"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1109 <userParam name="ExplainedIonCurrentRatio" value="0.0016366612"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1110 <userParam name="NTermIonCurrentRatio" value="0.0016366612"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1111 <userParam name="CTermIonCurrentRatio" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1112 <userParam name="MS2IonCurrent" value="611.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1113 <userParam name="NumMatchedMainIons" value="1"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1114 <userParam name="MeanErrorAll" value="18.694866"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1115 <userParam name="StdevErrorAll" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1116 <userParam name="MeanErrorTop7" value="18.694866"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1117 <userParam name="StdevErrorTop7" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1118 <userParam name="MeanRelErrorAll" value="-18.694866"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1119 <userParam name="StdevRelErrorAll" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1120 <userParam name="MeanRelErrorTop7" value="-18.694866"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1121 <userParam name="StdevRelErrorTop7" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1122 </SpectrumIdentificationItem> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1123 </SpectrumIdentificationResult> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1124 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1213 experiment=2" spectraData_ref="SID_1" id="SIR_54"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1125 <SpectrumIdentificationItem chargeState="5" experimentalMassToCharge="497.6971435546875" calculatedMassToCharge="497.8994140625" peptide_ref="Pep_VFIQMGGRLRLVLHLTSEK" rank="1" passThreshold="true" id="SII_54_1"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1126 <PeptideEvidenceRef peptideEvidence_ref="PepEv_89308_VFIQMGGRLRLVLHLTSEK_73"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1127 <PeptideEvidenceRef peptideEvidence_ref="PepEv_89384_VFIQMGGRLRLVLHLTSEK_149"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1128 <PeptideEvidenceRef peptideEvidence_ref="PepEv_89460_VFIQMGGRLRLVLHLTSEK_225"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1129 <PeptideEvidenceRef peptideEvidence_ref="PepEv_89614_VFIQMGGRLRLVLHLTSEK_73"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1130 <PeptideEvidenceRef peptideEvidence_ref="PepEv_89690_VFIQMGGRLRLVLHLTSEK_149"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1131 <PeptideEvidenceRef peptideEvidence_ref="PepEv_89766_VFIQMGGRLRLVLHLTSEK_225"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1132 <PeptideEvidenceRef peptideEvidence_ref="PepEv_100592_VFIQMGGRLRLVLHLTSEK_73"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1133 <PeptideEvidenceRef peptideEvidence_ref="PepEv_100668_VFIQMGGRLRLVLHLTSEK_149"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1134 <PeptideEvidenceRef peptideEvidence_ref="PepEv_100744_VFIQMGGRLRLVLHLTSEK_225"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1135 <PeptideEvidenceRef peptideEvidence_ref="PepEv_101701_VFIQMGGRLRLVLHLTSEK_78"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1136 <PeptideEvidenceRef peptideEvidence_ref="PepEv_101777_VFIQMGGRLRLVLHLTSEK_154"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1137 <PeptideEvidenceRef peptideEvidence_ref="PepEv_101853_VFIQMGGRLRLVLHLTSEK_230"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1138 <PeptideEvidenceRef peptideEvidence_ref="PepEv_101929_VFIQMGGRLRLVLHLTSEK_306"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1139 <PeptideEvidenceRef peptideEvidence_ref="PepEv_102005_VFIQMGGRLRLVLHLTSEK_382"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1140 <PeptideEvidenceRef peptideEvidence_ref="PepEv_102081_VFIQMGGRLRLVLHLTSEK_458"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1141 <PeptideEvidenceRef peptideEvidence_ref="PepEv_102157_VFIQMGGRLRLVLHLTSEK_534"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1142 <PeptideEvidenceRef peptideEvidence_ref="PepEv_102233_VFIQMGGRLRLVLHLTSEK_610"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1143 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-35"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1144 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="80"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1145 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="0.0011284485"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1146 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="46.180626"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1147 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1148 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1149 <userParam name="IsotopeError" value="-1"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1150 <userParam name="AssumedDissociationMethod" value="HCD"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1151 <userParam name="ExplainedIonCurrentRatio" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1152 <userParam name="NTermIonCurrentRatio" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1153 <userParam name="CTermIonCurrentRatio" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1154 <userParam name="MS2IonCurrent" value="1027.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1155 </SpectrumIdentificationItem> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1156 <SpectrumIdentificationItem chargeState="5" experimentalMassToCharge="497.6971435546875" calculatedMassToCharge="497.8994140625" peptide_ref="Pep_ESTLHLVLRLRGGMQIFVK" rank="2" passThreshold="true" id="SII_54_2"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1157 <PeptideEvidenceRef peptideEvidence_ref="PepEv_33324_ESTLHLVLRLRGGMQIFVK_64"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1158 <PeptideEvidenceRef peptideEvidence_ref="PepEv_33400_ESTLHLVLRLRGGMQIFVK_140"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1159 <PeptideEvidenceRef peptideEvidence_ref="PepEv_33476_ESTLHLVLRLRGGMQIFVK_216"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1160 <PeptideEvidenceRef peptideEvidence_ref="PepEv_33630_ESTLHLVLRLRGGMQIFVK_64"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1161 <PeptideEvidenceRef peptideEvidence_ref="PepEv_33706_ESTLHLVLRLRGGMQIFVK_140"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1162 <PeptideEvidenceRef peptideEvidence_ref="PepEv_33782_ESTLHLVLRLRGGMQIFVK_216"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1163 <PeptideEvidenceRef peptideEvidence_ref="PepEv_44608_ESTLHLVLRLRGGMQIFVK_64"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1164 <PeptideEvidenceRef peptideEvidence_ref="PepEv_44684_ESTLHLVLRLRGGMQIFVK_140"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1165 <PeptideEvidenceRef peptideEvidence_ref="PepEv_44760_ESTLHLVLRLRGGMQIFVK_216"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1166 <PeptideEvidenceRef peptideEvidence_ref="PepEv_45712_ESTLHLVLRLRGGMQIFVK_64"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1167 <PeptideEvidenceRef peptideEvidence_ref="PepEv_45788_ESTLHLVLRLRGGMQIFVK_140"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1168 <PeptideEvidenceRef peptideEvidence_ref="PepEv_45864_ESTLHLVLRLRGGMQIFVK_216"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1169 <PeptideEvidenceRef peptideEvidence_ref="PepEv_45940_ESTLHLVLRLRGGMQIFVK_292"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1170 <PeptideEvidenceRef peptideEvidence_ref="PepEv_46016_ESTLHLVLRLRGGMQIFVK_368"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1171 <PeptideEvidenceRef peptideEvidence_ref="PepEv_46092_ESTLHLVLRLRGGMQIFVK_444"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1172 <PeptideEvidenceRef peptideEvidence_ref="PepEv_46168_ESTLHLVLRLRGGMQIFVK_520"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1173 <PeptideEvidenceRef peptideEvidence_ref="PepEv_46244_ESTLHLVLRLRGGMQIFVK_596"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1174 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-39"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1175 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="80"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1176 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="0.0021231007"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1177 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="86.88577"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1178 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1179 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1180 <userParam name="IsotopeError" value="-1"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1181 <userParam name="AssumedDissociationMethod" value="HCD"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1182 <userParam name="ExplainedIonCurrentRatio" value="9.7370986E-4"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1183 <userParam name="NTermIonCurrentRatio" value="9.7370986E-4"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1184 <userParam name="CTermIonCurrentRatio" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1185 <userParam name="MS2IonCurrent" value="1027.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1186 <userParam name="NumMatchedMainIons" value="1"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1187 <userParam name="MeanErrorAll" value="1.8923733"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1188 <userParam name="StdevErrorAll" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1189 <userParam name="MeanErrorTop7" value="1.8923733"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1190 <userParam name="StdevErrorTop7" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1191 <userParam name="MeanRelErrorAll" value="-1.8923733"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1192 <userParam name="StdevRelErrorAll" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1193 <userParam name="MeanRelErrorTop7" value="-1.8923733"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1194 <userParam name="StdevRelErrorTop7" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1195 </SpectrumIdentificationItem> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1196 </SpectrumIdentificationResult> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1197 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1283 experiment=2" spectraData_ref="SID_1" id="SIR_104"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1198 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="591.3255615234375" calculatedMassToCharge="591.3304443359375" peptide_ref="Pep_MAFRDVAVAFTQK" rank="1" passThreshold="true" id="SII_104_1"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1199 <PeptideEvidenceRef peptideEvidence_ref="PepEv_3312_MAFRDVAVAFTQK_1"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1200 <PeptideEvidenceRef peptideEvidence_ref="PepEv_27068_MAFRDVAVAFTQK_1"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1201 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-26"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1202 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="85"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1203 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="0.0011559059"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1204 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="46.27207"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1205 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1206 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1207 <userParam name="IsotopeError" value="0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1208 <userParam name="AssumedDissociationMethod" value="HCD"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1209 <userParam name="ExplainedIonCurrentRatio" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1210 <userParam name="NTermIonCurrentRatio" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1211 <userParam name="CTermIonCurrentRatio" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1212 <userParam name="MS2IonCurrent" value="1072.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1213 </SpectrumIdentificationItem> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1214 </SpectrumIdentificationResult> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1215 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1428 experiment=2" spectraData_ref="SID_1" id="SIR_105"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1216 <SpectrumIdentificationItem chargeState="4" experimentalMassToCharge="585.301513671875" calculatedMassToCharge="585.5540161132812" peptide_ref="Pep_130--17TVEAYSAAVQSQLQWMK" rank="1" passThreshold="true" id="SII_105_1"> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1217 <PeptideEvidenceRef peptideEvidence_ref="PepEv_10335_130--17TVEAYSAAVQSQLQWMK_831"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1218 <PeptideEvidenceRef peptideEvidence_ref="PepEv_17946_130--17TVEAYSAAVQSQLQWMK_831"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1219 <PeptideEvidenceRef peptideEvidence_ref="PepEv_39268_130--17TVEAYSAAVQSQLQWMK_755"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1220 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-47"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1221 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="93"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1222 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="0.002895186"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1223 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="118.0599"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1224 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1225 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1226 <userParam name="IsotopeError" value="-1"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1227 <userParam name="AssumedDissociationMethod" value="HCD"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1228 <userParam name="ExplainedIonCurrentRatio" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1229 <userParam name="NTermIonCurrentRatio" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1230 <userParam name="CTermIonCurrentRatio" value="0.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1231 <userParam name="MS2IonCurrent" value="330.0"/> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1232 </SpectrumIdentificationItem> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1233 </SpectrumIdentificationResult> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1234 </SpectrumIdentificationList> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1235 </AnalysisData> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1236 </DataCollection> |
058a2ab1d462
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff
changeset
|
1237 </MzIdentML> |