annotate test-data/201208-378803-msgf_20161026-2mmu-tryptic-many_mods.mzid @ 9:a26f5807eb85 draft default tip

planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit 75603eb19ef066d891fd906d7dd4b06f5498ca68
author galaxyp
date Mon, 04 Dec 2017 08:57:35 -0500
parents 09e0ae6f661b
children
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1 <?xml version="1.0" encoding="UTF-8"?>
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2 <MzIdentML xmlns="http://psidev.info/psi/pi/mzIdentML/1.1" id="MS-GF+" version="1.1.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://psidev.info/psi/pi/mzIdentML/1.1 http://www.psidev.info/files/mzIdentML1.1.0.xsd" creationDate="2017-10-29T18:22:31">
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3 <cvList xmlns="http://psidev.info/psi/pi/mzIdentML/1.1">
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5 <cv fullName="UNIMOD" uri="http://www.unimod.org/obo/unimod.obo" id="UNIMOD"/>
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7 </cvList>
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9 <AnalysisSoftware version="Release (v2017.07.21)" id="ID_software" name="MS-GF+">
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10 <SoftwareName>
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12 </SoftwareName>
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13 </AnalysisSoftware>
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14 </AnalysisSoftwareList>
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
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132 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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133 </Modification>
8
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
134 <Modification location="7" monoisotopicMassDelta="57.021463735">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
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135 <cvParam cvRef="UNIMOD" accession="UNIMOD:4" name="Carbamidomethyl"/>
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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136 </Modification>
8
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
137 <Modification location="7" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
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138 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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139 </Modification>
8
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
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140 <Modification location="11" monoisotopicMassDelta="144.102063">
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
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141 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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142 </Modification>
8
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
143 <Modification location="15" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
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144 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
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145 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
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146 <Modification location="16" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
147 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
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148 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
149 <Modification location="20" monoisotopicMassDelta="144.102063">
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
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150 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
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151 </Modification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
152 </Peptide>
8
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
153 <Peptide id="Pep_EIAEAVS+343LPGK">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
154 <PeptideSequence>EIAEAVSLPGK</PeptideSequence>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
155 <Modification location="0" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
156 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
157 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
158 <Modification location="7" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
159 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
160 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
161 <Modification location="11" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
162 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
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163 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
164 </Peptide>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
165 <Peptide id="Pep_[-17QPFPKKFPFS+343EFVPK">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
166 <PeptideSequence>QPFPKKFPFSEFVPK</PeptideSequence>
2
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
167 <Modification location="0" monoisotopicMassDelta="144.102063">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
168 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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169 </Modification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
170 <Modification location="0" monoisotopicMassDelta="-17.026549105">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
171 <cvParam cvRef="UNIMOD" accession="UNIMOD:28" name="Gln-&gt;pyro-Glu"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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172 </Modification>
8
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
173 <Modification location="5" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
174 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
175 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
176 <Modification location="6" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
177 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
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178 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
179 <Modification location="10" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
180 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
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181 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
182 <Modification location="15" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
183 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
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184 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
185 </Peptide>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
186 <Peptide id="Pep_ES+343MKRALEYLRNRRK">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
187 <PeptideSequence>ESMKRALEYLRNRRK</PeptideSequence>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
188 <Modification location="0" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
189 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
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190 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
191 <Modification location="2" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
192 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
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193 </Modification>
2
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
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194 <Modification location="4" monoisotopicMassDelta="144.102063">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
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195 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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196 </Modification>
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
197 <Modification location="15" monoisotopicMassDelta="144.102063">
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
198 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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199 </Modification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
200 </Peptide>
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
201 <Peptide id="Pep_AM+16GSNMEKVC+343LK">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
202 <PeptideSequence>AMGSNMEKVCLK</PeptideSequence>
2
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
203 <Modification location="0" monoisotopicMassDelta="144.102063">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
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204 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
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205 </Modification>
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
206 <Modification location="2" monoisotopicMassDelta="15.99491463">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
207 <cvParam cvRef="UNIMOD" accession="UNIMOD:35" name="Oxidation"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
208 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
209 <Modification location="8" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
210 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
211 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
212 <Modification location="10" monoisotopicMassDelta="57.021463735">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
213 <cvParam cvRef="UNIMOD" accession="UNIMOD:4" name="Carbamidomethyl"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
214 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
215 <Modification location="10" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
216 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
217 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
218 <Modification location="12" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
219 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
220 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
221 </Peptide>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
222 <Peptide id="Pep_LCVKEM+16NS+343GMAK">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
223 <PeptideSequence>LCVKEMNSGMAK</PeptideSequence>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
224 <Modification location="0" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
225 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
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226 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
227 <Modification location="2" monoisotopicMassDelta="57.021463735">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
228 <cvParam cvRef="UNIMOD" accession="UNIMOD:4" name="Carbamidomethyl"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
229 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
230 <Modification location="4" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
231 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
232 </Modification>
2
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
233 <Modification location="6" monoisotopicMassDelta="15.99491463">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
234 <cvParam cvRef="UNIMOD" accession="UNIMOD:35" name="Oxidation"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
235 </Modification>
8
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
236 <Modification location="8" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
237 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
238 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
239 <Modification location="12" monoisotopicMassDelta="144.102063">
2
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
240 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
241 </Modification>
8
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
242 </Peptide>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
243 <Peptide id="Pep_KLSHNS+343M+16LPK">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
244 <PeptideSequence>KLSHNSMLPK</PeptideSequence>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
245 <Modification location="0" monoisotopicMassDelta="144.102063">
2
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
246 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
247 </Modification>
8
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
248 <Modification location="1" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
249 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
250 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
251 <Modification location="6" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
252 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
253 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
254 <Modification location="7" monoisotopicMassDelta="15.99491463">
2
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
255 <cvParam cvRef="UNIMOD" accession="UNIMOD:35" name="Oxidation"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
256 </Modification>
8
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
257 <Modification location="10" monoisotopicMassDelta="144.102063">
2
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
258 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
259 </Modification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
260 </Peptide>
8
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
261 <Peptide id="Pep_PLM+16S+343NHSLKK">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
262 <PeptideSequence>PLMSNHSLKK</PeptideSequence>
2
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
263 <Modification location="0" monoisotopicMassDelta="144.102063">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
264 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
265 </Modification>
8
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
266 <Modification location="3" monoisotopicMassDelta="15.99491463">
2
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
267 <cvParam cvRef="UNIMOD" accession="UNIMOD:35" name="Oxidation"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
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268 </Modification>
8
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
269 <Modification location="4" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
270 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
271 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
272 <Modification location="9" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
273 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
274 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
275 <Modification location="10" monoisotopicMassDelta="144.102063">
2
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
276 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
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277 </Modification>
8
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
278 </Peptide>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
279 <Peptide id="Pep_RLYNWS+343ILSK">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
280 <PeptideSequence>RLYNWSILSK</PeptideSequence>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
281 <Modification location="0" monoisotopicMassDelta="144.102063">
2
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
282 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
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283 </Modification>
8
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
284 <Modification location="6" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
285 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
286 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
287 <Modification location="10" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
288 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
2
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
289 </Modification>
8
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
290 </Peptide>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
291 <Peptide id="Pep_RLYNWSILS+343K">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
292 <PeptideSequence>RLYNWSILSK</PeptideSequence>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
293 <Modification location="0" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
294 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
295 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
296 <Modification location="9" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
297 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
298 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
299 <Modification location="10" monoisotopicMassDelta="144.102063">
2
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
300 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
301 </Modification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
302 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
303 <Peptide id="Pep_RDDLLRQLLK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
304 <PeptideSequence>RDDLLRQLLK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
305 <Modification location="0" monoisotopicMassDelta="144.102063">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
306 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
307 </Modification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
308 <Modification location="10" monoisotopicMassDelta="144.102063">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
309 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
310 </Modification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
311 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
312 <Peptide id="Pep_LLQRLLDDRK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
313 <PeptideSequence>LLQRLLDDRK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
314 <Modification location="0" monoisotopicMassDelta="144.102063">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
315 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
316 </Modification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
317 <Modification location="10" monoisotopicMassDelta="144.102063">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
318 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
319 </Modification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
320 </Peptide>
8
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
321 <Peptide id="Pep_NLNEWANNM+16EDIS+343KKVEPK">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
322 <PeptideSequence>NLNEWANNMEDISKKVEPK</PeptideSequence>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
323 <Modification location="0" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
324 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
325 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
326 <Modification location="9" monoisotopicMassDelta="15.99491463">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
327 <cvParam cvRef="UNIMOD" accession="UNIMOD:35" name="Oxidation"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
328 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
329 <Modification location="13" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
330 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
331 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
332 <Modification location="14" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
333 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
334 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
335 <Modification location="15" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
336 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
337 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
338 <Modification location="19" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
339 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
340 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
341 </Peptide>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
342 <Peptide id="Pep_PEVKKS+343IDEM+16NNAWENLNK">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
343 <PeptideSequence>PEVKKSIDEMNNAWENLNK</PeptideSequence>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
344 <Modification location="0" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
345 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
346 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
347 <Modification location="4" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
348 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
349 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
350 <Modification location="5" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
351 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
352 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
353 <Modification location="6" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
354 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
355 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
356 <Modification location="10" monoisotopicMassDelta="15.99491463">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
357 <cvParam cvRef="UNIMOD" accession="UNIMOD:35" name="Oxidation"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
358 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
359 <Modification location="19" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
360 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
361 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
362 </Peptide>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
363 <Peptide id="Pep_LVS+343DANEQYK">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
364 <PeptideSequence>LVSDANEQYK</PeptideSequence>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
365 <Modification location="0" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
366 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
367 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
368 <Modification location="3" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
369 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
370 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
371 <Modification location="10" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
372 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
373 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
374 </Peptide>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
375 <Peptide id="Pep_YQENADS+343VLK">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
376 <PeptideSequence>YQENADSVLK</PeptideSequence>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
377 <Modification location="0" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
378 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
379 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
380 <Modification location="7" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
381 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
382 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
383 <Modification location="10" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
384 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
385 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
386 </Peptide>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
387 <Peptide id="Pep_[-17QM+16EAESISSSEQKHIQK">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
388 <PeptideSequence>QMEAESISSSEQKHIQK</PeptideSequence>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
389 <Modification location="0" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
390 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
391 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
392 <Modification location="0" monoisotopicMassDelta="-17.026549105">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
393 <cvParam cvRef="UNIMOD" accession="UNIMOD:28" name="Gln-&gt;pyro-Glu"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
394 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
395 <Modification location="2" monoisotopicMassDelta="15.99491463">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
396 <cvParam cvRef="UNIMOD" accession="UNIMOD:35" name="Oxidation"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
397 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
398 <Modification location="13" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
399 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
400 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
401 <Modification location="17" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
402 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
403 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
404 </Peptide>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
405 <Peptide id="Pep_[-17QQAHIGEKMS+343HLRELQPVK">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
406 <PeptideSequence>QQAHIGEKMSHLRELQPVK</PeptideSequence>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
407 <Modification location="0" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
408 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
409 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
410 <Modification location="0" monoisotopicMassDelta="-17.026549105">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
411 <cvParam cvRef="UNIMOD" accession="UNIMOD:28" name="Gln-&gt;pyro-Glu"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
412 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
413 <Modification location="8" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
414 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
415 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
416 <Modification location="10" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
417 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
418 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
419 <Modification location="19" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
420 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
421 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
422 </Peptide>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
423 <Peptide id="Pep_EDHELC+343LQRTFVNK">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
424 <PeptideSequence>EDHELCLQRTFVNK</PeptideSequence>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
425 <Modification location="0" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
426 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
427 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
428 <Modification location="6" monoisotopicMassDelta="57.021463735">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
429 <cvParam cvRef="UNIMOD" accession="UNIMOD:4" name="Carbamidomethyl"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
430 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
431 <Modification location="6" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
432 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
433 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
434 <Modification location="14" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
435 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
436 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
437 </Peptide>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
438 <Peptide id="Pep_[-17QEKNMAINPS+343K">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
439 <PeptideSequence>QEKNMAINPSK</PeptideSequence>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
440 <Modification location="0" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
441 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
442 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
443 <Modification location="0" monoisotopicMassDelta="-17.026549105">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
444 <cvParam cvRef="UNIMOD" accession="UNIMOD:28" name="Gln-&gt;pyro-Glu"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
445 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
446 <Modification location="3" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
447 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
448 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
449 <Modification location="10" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
450 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
451 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
452 <Modification location="11" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
453 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
454 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
455 </Peptide>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
456 <Peptide id="Pep_S+343FPQNPVELK">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
457 <PeptideSequence>SFPQNPVELK</PeptideSequence>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
458 <Modification location="0" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
459 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
460 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
461 <Modification location="1" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
462 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
463 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
464 <Modification location="10" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
465 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
466 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
467 </Peptide>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
468 <Peptide id="Pep_TRGPAALS+343EEK">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
469 <PeptideSequence>TRGPAALSEEK</PeptideSequence>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
470 <Modification location="0" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
471 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
472 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
473 <Modification location="8" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
474 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
475 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
476 <Modification location="11" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
477 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
478 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
479 </Peptide>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
480 <Peptide id="Pep_PFMIPFCNDGQIC+343YEECQTK">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
481 <PeptideSequence>PFMIPFCNDGQICYEECQTK</PeptideSequence>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
482 <Modification location="0" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
483 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
484 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
485 <Modification location="7" monoisotopicMassDelta="57.021463735">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
486 <cvParam cvRef="UNIMOD" accession="UNIMOD:4" name="Carbamidomethyl"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
487 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
488 <Modification location="13" monoisotopicMassDelta="57.021463735">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
489 <cvParam cvRef="UNIMOD" accession="UNIMOD:4" name="Carbamidomethyl"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
490 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
491 <Modification location="13" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
492 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
493 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
494 <Modification location="17" monoisotopicMassDelta="57.021463735">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
495 <cvParam cvRef="UNIMOD" accession="UNIMOD:4" name="Carbamidomethyl"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
496 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
497 <Modification location="20" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
498 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
499 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
500 </Peptide>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
501 <Peptide id="Pep_PFMIPFC+343NDGQICYEECQTK">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
502 <PeptideSequence>PFMIPFCNDGQICYEECQTK</PeptideSequence>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
503 <Modification location="0" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
504 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
505 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
506 <Modification location="7" monoisotopicMassDelta="57.021463735">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
507 <cvParam cvRef="UNIMOD" accession="UNIMOD:4" name="Carbamidomethyl"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
508 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
509 <Modification location="7" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
510 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
511 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
512 <Modification location="13" monoisotopicMassDelta="57.021463735">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
513 <cvParam cvRef="UNIMOD" accession="UNIMOD:4" name="Carbamidomethyl"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
514 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
515 <Modification location="17" monoisotopicMassDelta="57.021463735">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
516 <cvParam cvRef="UNIMOD" accession="UNIMOD:4" name="Carbamidomethyl"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
517 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
518 <Modification location="20" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
519 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
520 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
521 </Peptide>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
522 <Peptide id="Pep_LHQEVC+343LC+343LQK">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
523 <PeptideSequence>LHQEVCLCLQK</PeptideSequence>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
524 <Modification location="0" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
525 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
526 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
527 <Modification location="6" monoisotopicMassDelta="57.021463735">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
528 <cvParam cvRef="UNIMOD" accession="UNIMOD:4" name="Carbamidomethyl"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
529 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
530 <Modification location="6" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
531 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
532 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
533 <Modification location="8" monoisotopicMassDelta="57.021463735">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
534 <cvParam cvRef="UNIMOD" accession="UNIMOD:4" name="Carbamidomethyl"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
535 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
536 <Modification location="8" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
537 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
538 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
539 <Modification location="11" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
540 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
541 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
542 </Peptide>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
543 <Peptide id="Pep_QLC+343LC+343VEQHLK">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
544 <PeptideSequence>QLCLCVEQHLK</PeptideSequence>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
545 <Modification location="0" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
546 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
547 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
548 <Modification location="3" monoisotopicMassDelta="57.021463735">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
549 <cvParam cvRef="UNIMOD" accession="UNIMOD:4" name="Carbamidomethyl"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
550 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
551 <Modification location="3" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
552 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
553 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
554 <Modification location="5" monoisotopicMassDelta="57.021463735">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
555 <cvParam cvRef="UNIMOD" accession="UNIMOD:4" name="Carbamidomethyl"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
556 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
557 <Modification location="5" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
558 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
559 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
560 <Modification location="11" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
561 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
562 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
563 </Peptide>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
564 <Peptide id="Pep_NEM+16AM+16CGSNVRQK">
2
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
565 <PeptideSequence>NEMAMCGSNVRQK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
566 <Modification location="0" monoisotopicMassDelta="144.102063">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
567 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
568 </Modification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
569 <Modification location="3" monoisotopicMassDelta="15.99491463">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
570 <cvParam cvRef="UNIMOD" accession="UNIMOD:35" name="Oxidation"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
571 </Modification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
572 <Modification location="5" monoisotopicMassDelta="15.99491463">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
573 <cvParam cvRef="UNIMOD" accession="UNIMOD:35" name="Oxidation"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
574 </Modification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
575 <Modification location="6" monoisotopicMassDelta="57.021463735">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
576 <cvParam cvRef="UNIMOD" accession="UNIMOD:4" name="Carbamidomethyl"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
577 </Modification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
578 <Modification location="13" monoisotopicMassDelta="144.102063">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
579 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
580 </Modification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
581 </Peptide>
8
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
582 <Peptide id="Pep_QRVNSGCM+16AM+16ENK">
2
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
583 <PeptideSequence>QRVNSGCMAMENK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
584 <Modification location="0" monoisotopicMassDelta="144.102063">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
585 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
586 </Modification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
587 <Modification location="7" monoisotopicMassDelta="57.021463735">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
588 <cvParam cvRef="UNIMOD" accession="UNIMOD:4" name="Carbamidomethyl"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
589 </Modification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
590 <Modification location="8" monoisotopicMassDelta="15.99491463">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
591 <cvParam cvRef="UNIMOD" accession="UNIMOD:35" name="Oxidation"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
592 </Modification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
593 <Modification location="10" monoisotopicMassDelta="15.99491463">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
594 <cvParam cvRef="UNIMOD" accession="UNIMOD:35" name="Oxidation"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
595 </Modification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
596 <Modification location="13" monoisotopicMassDelta="144.102063">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
597 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
598 </Modification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
599 </Peptide>
8
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
600 <Peptide id="Pep_GRTRTAIRNGQVWEES+343LK">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
601 <PeptideSequence>GRTRTAIRNGQVWEESLK</PeptideSequence>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
602 <Modification location="0" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
603 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
604 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
605 <Modification location="16" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
606 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
607 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
608 <Modification location="18" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
609 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
610 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
611 </Peptide>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
612 <Peptide id="Pep_LPQGYHPNDVEEEWGK">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
613 <PeptideSequence>LPQGYHPNDVEEEWGK</PeptideSequence>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
614 <Modification location="0" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
615 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
616 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
617 <Modification location="16" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
618 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
619 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
620 </Peptide>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
621 <Peptide id="Pep_RFQAFM+16NNKRSTDKM+16K">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
622 <PeptideSequence>RFQAFMNNKRSTDKMK</PeptideSequence>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
623 <Modification location="0" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
624 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
625 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
626 <Modification location="6" monoisotopicMassDelta="15.99491463">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
627 <cvParam cvRef="UNIMOD" accession="UNIMOD:35" name="Oxidation"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
628 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
629 <Modification location="9" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
630 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
631 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
632 <Modification location="14" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
633 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
634 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
635 <Modification location="15" monoisotopicMassDelta="15.99491463">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
636 <cvParam cvRef="UNIMOD" accession="UNIMOD:35" name="Oxidation"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
637 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
638 <Modification location="16" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
639 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
640 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
641 </Peptide>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
642 <Peptide id="Pep_M+16KDTSRKNNM+16FAQFRK">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
643 <PeptideSequence>MKDTSRKNNMFAQFRK</PeptideSequence>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
644 <Modification location="0" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
645 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
646 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
647 <Modification location="1" monoisotopicMassDelta="15.99491463">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
648 <cvParam cvRef="UNIMOD" accession="UNIMOD:35" name="Oxidation"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
649 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
650 <Modification location="2" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
651 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
652 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
653 <Modification location="7" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
654 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
655 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
656 <Modification location="10" monoisotopicMassDelta="15.99491463">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
657 <cvParam cvRef="UNIMOD" accession="UNIMOD:35" name="Oxidation"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
658 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
659 <Modification location="16" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
660 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
661 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
662 </Peptide>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
663 <Peptide id="Pep_FLGRIGGNGEES+343ENDK">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
664 <PeptideSequence>FLGRIGGNGEESENDK</PeptideSequence>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
665 <Modification location="0" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
666 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
667 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
668 <Modification location="12" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
669 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
670 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
671 <Modification location="16" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
672 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
673 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
674 </Peptide>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
675 <Peptide id="Pep_DNES+343EEGNGGIRGLFK">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
676 <PeptideSequence>DNESEEGNGGIRGLFK</PeptideSequence>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
677 <Modification location="0" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
678 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
679 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
680 <Modification location="4" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
681 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
682 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
683 <Modification location="16" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
684 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
685 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
686 </Peptide>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
687 <Peptide id="Pep_RCNVARPHLRAYC+343K">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
688 <PeptideSequence>RCNVARPHLRAYCK</PeptideSequence>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
689 <Modification location="0" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
690 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
691 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
692 <Modification location="2" monoisotopicMassDelta="57.021463735">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
693 <cvParam cvRef="UNIMOD" accession="UNIMOD:4" name="Carbamidomethyl"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
694 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
695 <Modification location="13" monoisotopicMassDelta="57.021463735">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
696 <cvParam cvRef="UNIMOD" accession="UNIMOD:4" name="Carbamidomethyl"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
697 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
698 <Modification location="13" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
699 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
700 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
701 <Modification location="14" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
702 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
703 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
704 </Peptide>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
705 <Peptide id="Pep_C+343YARLHPRAVNCRK">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
706 <PeptideSequence>CYARLHPRAVNCRK</PeptideSequence>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
707 <Modification location="0" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
708 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
709 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
710 <Modification location="1" monoisotopicMassDelta="57.021463735">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
711 <cvParam cvRef="UNIMOD" accession="UNIMOD:4" name="Carbamidomethyl"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
712 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
713 <Modification location="1" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
714 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
715 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
716 <Modification location="12" monoisotopicMassDelta="57.021463735">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
717 <cvParam cvRef="UNIMOD" accession="UNIMOD:4" name="Carbamidomethyl"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
718 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
719 <Modification location="14" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
720 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
721 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
722 </Peptide>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
723 <Peptide id="Pep_M+16S+343HLRELQPVKYK">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
724 <PeptideSequence>MSHLRELQPVKYK</PeptideSequence>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
725 <Modification location="0" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
726 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
727 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
728 <Modification location="1" monoisotopicMassDelta="15.99491463">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
729 <cvParam cvRef="UNIMOD" accession="UNIMOD:35" name="Oxidation"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
730 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
731 <Modification location="2" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
732 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
733 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
734 <Modification location="11" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
735 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
736 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
737 <Modification location="13" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
738 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
739 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
740 </Peptide>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
741 <Peptide id="Pep_ERMTEIKPLLC+343AGK">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
742 <PeptideSequence>ERMTEIKPLLCAGK</PeptideSequence>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
743 <Modification location="0" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
744 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
745 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
746 <Modification location="7" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
747 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
748 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
749 <Modification location="11" monoisotopicMassDelta="57.021463735">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
750 <cvParam cvRef="UNIMOD" accession="UNIMOD:4" name="Carbamidomethyl"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
751 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
752 <Modification location="11" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
753 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
754 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
755 <Modification location="14" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
756 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
757 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
758 </Peptide>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
759 <Peptide id="Pep_[-17QLCLC+343VEQHLK">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
760 <PeptideSequence>QLCLCVEQHLK</PeptideSequence>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
761 <Modification location="0" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
762 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
763 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
764 <Modification location="0" monoisotopicMassDelta="-17.026549105">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
765 <cvParam cvRef="UNIMOD" accession="UNIMOD:28" name="Gln-&gt;pyro-Glu"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
766 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
767 <Modification location="3" monoisotopicMassDelta="57.021463735">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
768 <cvParam cvRef="UNIMOD" accession="UNIMOD:4" name="Carbamidomethyl"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
769 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
770 <Modification location="5" monoisotopicMassDelta="57.021463735">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
771 <cvParam cvRef="UNIMOD" accession="UNIMOD:4" name="Carbamidomethyl"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
772 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
773 <Modification location="5" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
774 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
775 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
776 <Modification location="11" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
777 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
778 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
779 </Peptide>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
780 <Peptide id="Pep_[-17QLC+343LCVEQHLK">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
781 <PeptideSequence>QLCLCVEQHLK</PeptideSequence>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
782 <Modification location="0" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
783 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
784 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
785 <Modification location="0" monoisotopicMassDelta="-17.026549105">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
786 <cvParam cvRef="UNIMOD" accession="UNIMOD:28" name="Gln-&gt;pyro-Glu"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
787 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
788 <Modification location="3" monoisotopicMassDelta="57.021463735">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
789 <cvParam cvRef="UNIMOD" accession="UNIMOD:4" name="Carbamidomethyl"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
790 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
791 <Modification location="3" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
792 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
793 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
794 <Modification location="5" monoisotopicMassDelta="57.021463735">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
795 <cvParam cvRef="UNIMOD" accession="UNIMOD:4" name="Carbamidomethyl"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
796 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
797 <Modification location="11" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
798 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
799 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
800 </Peptide>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
801 <Peptide id="Pep_ECCDKPLLEK">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
802 <PeptideSequence>ECCDKPLLEK</PeptideSequence>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
803 <Modification location="0" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
804 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
805 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
806 <Modification location="2" monoisotopicMassDelta="57.021463735">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
807 <cvParam cvRef="UNIMOD" accession="UNIMOD:4" name="Carbamidomethyl"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
808 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
809 <Modification location="3" monoisotopicMassDelta="57.021463735">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
810 <cvParam cvRef="UNIMOD" accession="UNIMOD:4" name="Carbamidomethyl"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
811 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
812 <Modification location="5" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
813 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
814 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
815 <Modification location="10" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
816 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
817 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
818 </Peptide>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
819 <Peptide id="Pep_LKETSSFRMRHLQS+343LHK">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
820 <PeptideSequence>LKETSSFRMRHLQSLHK</PeptideSequence>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
821 <Modification location="0" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
822 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
823 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
824 <Modification location="2" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
825 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
826 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
827 <Modification location="14" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
828 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
829 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
830 <Modification location="17" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
831 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
832 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
833 </Peptide>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
834 <Peptide id="Pep_[-17QESSSISEAEM+16QK">
2
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
835 <PeptideSequence>QESSSISEAEMQK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
836 <Modification location="0" monoisotopicMassDelta="144.102063">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
837 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
838 </Modification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
839 <Modification location="0" monoisotopicMassDelta="-17.026549105">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
840 <cvParam cvRef="UNIMOD" accession="UNIMOD:28" name="Gln-&gt;pyro-Glu"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
841 </Modification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
842 <Modification location="11" monoisotopicMassDelta="15.99491463">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
843 <cvParam cvRef="UNIMOD" accession="UNIMOD:35" name="Oxidation"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
844 </Modification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
845 <Modification location="13" monoisotopicMassDelta="144.102063">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
846 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
847 </Modification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
848 </Peptide>
8
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
849 <Peptide id="Pep_[-17QM+16EAESISSSEQK">
2
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
850 <PeptideSequence>QMEAESISSSEQK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
851 <Modification location="0" monoisotopicMassDelta="144.102063">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
852 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
853 </Modification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
854 <Modification location="0" monoisotopicMassDelta="-17.026549105">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
855 <cvParam cvRef="UNIMOD" accession="UNIMOD:28" name="Gln-&gt;pyro-Glu"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
856 </Modification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
857 <Modification location="2" monoisotopicMassDelta="15.99491463">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
858 <cvParam cvRef="UNIMOD" accession="UNIMOD:35" name="Oxidation"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
859 </Modification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
860 <Modification location="13" monoisotopicMassDelta="144.102063">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
861 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
862 </Modification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
863 </Peptide>
8
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
864 <Peptide id="Pep_QEPERNEC+343FLS+343HK">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
865 <PeptideSequence>QEPERNECFLSHK</PeptideSequence>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
866 <Modification location="0" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
867 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
868 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
869 <Modification location="8" monoisotopicMassDelta="57.021463735">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
870 <cvParam cvRef="UNIMOD" accession="UNIMOD:4" name="Carbamidomethyl"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
871 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
872 <Modification location="8" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
873 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
874 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
875 <Modification location="11" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
876 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
877 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
878 <Modification location="13" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
879 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
880 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
881 </Peptide>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
882 <Peptide id="Pep_HS+343LFC+343ENREPEQK">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
883 <PeptideSequence>HSLFCENREPEQK</PeptideSequence>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
884 <Modification location="0" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
885 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
886 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
887 <Modification location="2" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
888 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
889 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
890 <Modification location="5" monoisotopicMassDelta="57.021463735">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
891 <cvParam cvRef="UNIMOD" accession="UNIMOD:4" name="Carbamidomethyl"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
892 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
893 <Modification location="5" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
894 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
895 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
896 <Modification location="13" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
897 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
898 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
899 </Peptide>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
900 <Peptide id="Pep_LDS+343MS+343VDKIEERLK">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
901 <PeptideSequence>LDSMSVDKIEERLK</PeptideSequence>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
902 <Modification location="0" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
903 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
904 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
905 <Modification location="3" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
906 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
907 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
908 <Modification location="5" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
909 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
910 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
911 <Modification location="8" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
912 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
913 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
914 <Modification location="14" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
915 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
916 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
917 </Peptide>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
918 <Peptide id="Pep_LREEIKDVS+343MS+343DLK">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
919 <PeptideSequence>LREEIKDVSMSDLK</PeptideSequence>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
920 <Modification location="0" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
921 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
922 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
923 <Modification location="6" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
924 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
925 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
926 <Modification location="9" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
927 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
928 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
929 <Modification location="11" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
930 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
931 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
932 <Modification location="14" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
933 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
934 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
935 </Peptide>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
936 <Peptide id="Pep_VASLRETYGDM+16ADCCEK">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
937 <PeptideSequence>VASLRETYGDMADCCEK</PeptideSequence>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
938 <Modification location="0" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
939 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
940 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
941 <Modification location="11" monoisotopicMassDelta="15.99491463">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
942 <cvParam cvRef="UNIMOD" accession="UNIMOD:35" name="Oxidation"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
943 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
944 <Modification location="14" monoisotopicMassDelta="57.021463735">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
945 <cvParam cvRef="UNIMOD" accession="UNIMOD:4" name="Carbamidomethyl"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
946 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
947 <Modification location="15" monoisotopicMassDelta="57.021463735">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
948 <cvParam cvRef="UNIMOD" accession="UNIMOD:4" name="Carbamidomethyl"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
949 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
950 <Modification location="17" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
951 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
952 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
953 </Peptide>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
954 <Peptide id="Pep_ECCDAM+16DGYTERLSAVK">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
955 <PeptideSequence>ECCDAMDGYTERLSAVK</PeptideSequence>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
956 <Modification location="0" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
957 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
958 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
959 <Modification location="2" monoisotopicMassDelta="57.021463735">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
960 <cvParam cvRef="UNIMOD" accession="UNIMOD:4" name="Carbamidomethyl"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
961 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
962 <Modification location="3" monoisotopicMassDelta="57.021463735">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
963 <cvParam cvRef="UNIMOD" accession="UNIMOD:4" name="Carbamidomethyl"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
964 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
965 <Modification location="6" monoisotopicMassDelta="15.99491463">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
966 <cvParam cvRef="UNIMOD" accession="UNIMOD:35" name="Oxidation"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
967 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
968 <Modification location="17" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
969 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
970 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
971 </Peptide>
2
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
972 <Peptide id="Pep_LQKVAHDLMEIEGEPAPDRK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
973 <PeptideSequence>LQKVAHDLMEIEGEPAPDRK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
974 <Modification location="0" monoisotopicMassDelta="144.102063">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
975 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
976 </Modification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
977 <Modification location="3" monoisotopicMassDelta="144.102063">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
978 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
979 </Modification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
980 <Modification location="20" monoisotopicMassDelta="144.102063">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
981 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
982 </Modification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
983 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
984 <Peptide id="Pep_RDPAPEGEIEMLDHAVKQLK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
985 <PeptideSequence>RDPAPEGEIEMLDHAVKQLK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
986 <Modification location="0" monoisotopicMassDelta="144.102063">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
987 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
988 </Modification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
989 <Modification location="17" monoisotopicMassDelta="144.102063">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
990 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
991 </Modification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
992 <Modification location="20" monoisotopicMassDelta="144.102063">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
993 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
994 </Modification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
995 </Peptide>
8
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
996 <Peptide id="Pep_RFQAFMNNKRS+343TDKM+16K">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
997 <PeptideSequence>RFQAFMNNKRSTDKMK</PeptideSequence>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
998 <Modification location="0" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
999 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1000 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1001 <Modification location="9" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1002 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1003 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1004 <Modification location="11" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1005 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1006 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1007 <Modification location="14" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1008 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1009 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1010 <Modification location="15" monoisotopicMassDelta="15.99491463">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1011 <cvParam cvRef="UNIMOD" accession="UNIMOD:35" name="Oxidation"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1012 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1013 <Modification location="16" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1014 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1015 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1016 </Peptide>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1017 <Peptide id="Pep_SM+16ENEDKEETVAK">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1018 <PeptideSequence>SMENEDKEETVAK</PeptideSequence>
2
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1019 <Modification location="0" monoisotopicMassDelta="144.102063">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1020 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1021 </Modification>
8
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1022 <Modification location="2" monoisotopicMassDelta="15.99491463">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1023 <cvParam cvRef="UNIMOD" accession="UNIMOD:35" name="Oxidation"/>
2
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1024 </Modification>
8
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1025 <Modification location="7" monoisotopicMassDelta="144.102063">
2
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1026 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1027 </Modification>
8
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1028 <Modification location="13" monoisotopicMassDelta="144.102063">
2
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1029 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1030 </Modification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1031 </Peptide>
8
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1032 <Peptide id="Pep_SRGVLSAVSS+343KS+343QILQEK">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1033 <PeptideSequence>SRGVLSAVSSKSQILQEK</PeptideSequence>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1034 <Modification location="0" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1035 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1036 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1037 <Modification location="10" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1038 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1039 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1040 <Modification location="11" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1041 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1042 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1043 <Modification location="12" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1044 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1045 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1046 <Modification location="18" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1047 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1048 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1049 </Peptide>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1050 <Peptide id="Pep_SRGVLS+343AVSS+343KSQILQEK">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1051 <PeptideSequence>SRGVLSAVSSKSQILQEK</PeptideSequence>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1052 <Modification location="0" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1053 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1054 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1055 <Modification location="6" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1056 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1057 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1058 <Modification location="10" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1059 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1060 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1061 <Modification location="11" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1062 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1063 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1064 <Modification location="18" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1065 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1066 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1067 </Peptide>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1068 <Peptide id="Pep_SRGVLS+343AVS+343SKSQILQEK">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1069 <PeptideSequence>SRGVLSAVSSKSQILQEK</PeptideSequence>
2
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1070 <Modification location="0" monoisotopicMassDelta="144.102063">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1071 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1072 </Modification>
8
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1073 <Modification location="6" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1074 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1075 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1076 <Modification location="9" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1077 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1078 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1079 <Modification location="11" monoisotopicMassDelta="144.102063">
2
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1080 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1081 </Modification>
8
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1082 <Modification location="18" monoisotopicMassDelta="144.102063">
2
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1083 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1084 </Modification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1085 </Peptide>
8
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1086 <Peptide id="Pep_SRGVLSAVS+343SKS+343QILQEK">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1087 <PeptideSequence>SRGVLSAVSSKSQILQEK</PeptideSequence>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1088 <Modification location="0" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1089 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1090 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1091 <Modification location="9" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1092 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1093 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1094 <Modification location="11" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1095 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1096 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1097 <Modification location="12" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1098 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1099 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1100 <Modification location="18" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1101 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1102 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1103 </Peptide>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1104 <Peptide id="Pep_SRGVLS+343AVSSKS+343QILQEK">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1105 <PeptideSequence>SRGVLSAVSSKSQILQEK</PeptideSequence>
2
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1106 <Modification location="0" monoisotopicMassDelta="144.102063">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1107 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1108 </Modification>
8
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1109 <Modification location="6" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1110 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
2
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1111 </Modification>
8
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1112 <Modification location="11" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1113 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
2
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1114 </Modification>
8
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1115 <Modification location="12" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1116 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
2
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1117 </Modification>
8
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1118 <Modification location="18" monoisotopicMassDelta="144.102063">
2
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1119 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1120 </Modification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1121 </Peptide>
8
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1122 <Peptide id="Pep_SRGVLSAVS+343S+343KSQILQEK">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1123 <PeptideSequence>SRGVLSAVSSKSQILQEK</PeptideSequence>
2
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1124 <Modification location="0" monoisotopicMassDelta="144.102063">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1125 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1126 </Modification>
8
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1127 <Modification location="9" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1128 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1129 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1130 <Modification location="10" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1131 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1132 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1133 <Modification location="11" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1134 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1135 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1136 <Modification location="18" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1137 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
2
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1138 </Modification>
8
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1139 </Peptide>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1140 <Peptide id="Pep_KS+343IDEM+16NNAWENLNK">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1141 <PeptideSequence>KSIDEMNNAWENLNK</PeptideSequence>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1142 <Modification location="0" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1143 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1144 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1145 <Modification location="1" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1146 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1147 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1148 <Modification location="2" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1149 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
2
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1150 </Modification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1151 <Modification location="6" monoisotopicMassDelta="15.99491463">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1152 <cvParam cvRef="UNIMOD" accession="UNIMOD:35" name="Oxidation"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1153 </Modification>
8
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1154 <Modification location="15" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1155 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1156 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1157 </Peptide>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1158 <Peptide id="Pep_NLNEWANNM+16EDIS+343KK">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1159 <PeptideSequence>NLNEWANNMEDISKK</PeptideSequence>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1160 <Modification location="0" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1161 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1162 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1163 <Modification location="9" monoisotopicMassDelta="15.99491463">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1164 <cvParam cvRef="UNIMOD" accession="UNIMOD:35" name="Oxidation"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1165 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1166 <Modification location="13" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1167 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1168 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1169 <Modification location="14" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1170 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1171 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1172 <Modification location="15" monoisotopicMassDelta="144.102063">
2
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1173 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1174 </Modification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1175 </Peptide>
8
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1176 <Peptide id="Pep_VKES+343LDQLLEQYQTS+343K">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1177 <PeptideSequence>VKESLDQLLEQYQTSK</PeptideSequence>
2
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1178 <Modification location="0" monoisotopicMassDelta="144.102063">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1179 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1180 </Modification>
8
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1181 <Modification location="2" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1182 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1183 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1184 <Modification location="4" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1185 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1186 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1187 <Modification location="15" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1188 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1189 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1190 <Modification location="16" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1191 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1192 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1193 </Peptide>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1194 <Peptide id="Pep_S+343TQYQELLQDLS+343EKVK">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1195 <PeptideSequence>STQYQELLQDLSEKVK</PeptideSequence>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1196 <Modification location="0" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1197 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1198 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1199 <Modification location="1" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1200 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1201 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1202 <Modification location="12" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1203 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1204 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1205 <Modification location="14" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1206 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1207 </Modification>
2
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1208 <Modification location="16" monoisotopicMassDelta="144.102063">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1209 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1210 </Modification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1211 </Peptide>
8
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1212 <Peptide id="Pep_MAFRDVAVAFTQK">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1213 <PeptideSequence>MAFRDVAVAFTQK</PeptideSequence>
2
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1214 <Modification location="0" monoisotopicMassDelta="144.102063">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1215 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1216 </Modification>
8
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1217 <Modification location="13" monoisotopicMassDelta="144.102063">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1218 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1219 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1220 </Peptide>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1221 <Peptide id="Pep_ES+343TLHLVLRLRGGC+343">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1222 <PeptideSequence>ESTLHLVLRLRGGC</PeptideSequence>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1223 <Modification location="0" monoisotopicMassDelta="144.102063">
2
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1224 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1225 </Modification>
8
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1226 <Modification location="2" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1227 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1228 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1229 <Modification location="14" monoisotopicMassDelta="57.021463735">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1230 <cvParam cvRef="UNIMOD" accession="UNIMOD:4" name="Carbamidomethyl"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1231 </Modification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1232 <Modification location="14" monoisotopicMassDelta="343.03178476">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1233 <cvParam cvRef="UNIMOD" accession="UNIMOD:849" name="cGMP"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1234 </Modification>
2
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1235 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1236 <Peptide id="Pep_ILWAQKKAMGSNMEKVCLK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1237 <PeptideSequence>ILWAQKKAMGSNMEKVCLK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1238 <Modification location="0" monoisotopicMassDelta="144.102063">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1239 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1240 </Modification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1241 <Modification location="6" monoisotopicMassDelta="144.102063">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1242 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1243 </Modification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1244 <Modification location="7" monoisotopicMassDelta="144.102063">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1245 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1246 </Modification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1247 <Modification location="15" monoisotopicMassDelta="144.102063">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1248 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1249 </Modification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1250 <Modification location="17" monoisotopicMassDelta="57.021463735">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1251 <cvParam cvRef="UNIMOD" accession="UNIMOD:4" name="Carbamidomethyl"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1252 </Modification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1253 <Modification location="19" monoisotopicMassDelta="144.102063">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1254 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1255 </Modification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1256 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1257 <Peptide id="Pep_LCVKEMNSGMAKKQAWLIK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1258 <PeptideSequence>LCVKEMNSGMAKKQAWLIK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1259 <Modification location="0" monoisotopicMassDelta="144.102063">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1260 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1261 </Modification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1262 <Modification location="2" monoisotopicMassDelta="57.021463735">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1263 <cvParam cvRef="UNIMOD" accession="UNIMOD:4" name="Carbamidomethyl"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1264 </Modification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1265 <Modification location="4" monoisotopicMassDelta="144.102063">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1266 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1267 </Modification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1268 <Modification location="12" monoisotopicMassDelta="144.102063">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1269 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1270 </Modification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1271 <Modification location="13" monoisotopicMassDelta="144.102063">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1272 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1273 </Modification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1274 <Modification location="19" monoisotopicMassDelta="144.102063">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1275 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1276 </Modification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1277 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1278 <Peptide id="Pep_VFIQMGGRLRLVLHLTSEK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1279 <PeptideSequence>VFIQMGGRLRLVLHLTSEK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1280 <Modification location="0" monoisotopicMassDelta="144.102063">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1281 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1282 </Modification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1283 <Modification location="19" monoisotopicMassDelta="144.102063">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1284 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1285 </Modification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1286 </Peptide>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1287 <Peptide id="Pep_ESTLHLVLRLRGGMQIFVK">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1288 <PeptideSequence>ESTLHLVLRLRGGMQIFVK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1289 <Modification location="0" monoisotopicMassDelta="144.102063">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1290 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1291 </Modification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1292 <Modification location="19" monoisotopicMassDelta="144.102063">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1293 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1294 </Modification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1295 </Peptide>
8
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1296 <Peptide id="Pep_[-17QTVEAYSAAVQSQLQWMK">
2
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1297 <PeptideSequence>QTVEAYSAAVQSQLQWMK</PeptideSequence>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1298 <Modification location="0" monoisotopicMassDelta="144.102063">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1299 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1300 </Modification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1301 <Modification location="0" monoisotopicMassDelta="-17.026549105">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1302 <cvParam cvRef="UNIMOD" accession="UNIMOD:28" name="Gln-&gt;pyro-Glu"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1303 </Modification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1304 <Modification location="18" monoisotopicMassDelta="144.102063">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1305 <cvParam cvRef="UNIMOD" accession="UNIMOD:214" name="iTRAQ4plex"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1306 </Modification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1307 </Peptide>
8
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1308 <PeptideEvidence dBSequence_ref="DBSeq43937" peptide_ref="Pep_PDPNTLC+343DEFKADEKKFWGK" start="141" end="160" pre="K" post="Y" isDecoy="false" id="PepEv_44077_PDPNTLC+343DEFKADEKKFWGK_141"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1309 <PeptideEvidence dBSequence_ref="DBSeq65480" peptide_ref="Pep_EIAEAVS+343LPGK" start="5889" end="5899" pre="K" post="N" isDecoy="true" id="PepEv_71368_EIAEAVS+343LPGK_5889"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1310 <PeptideEvidence dBSequence_ref="DBSeq27657" peptide_ref="Pep_[-17QPFPKKFPFS+343EFVPK" start="482" end="496" pre="K" post="V" isDecoy="false" id="PepEv_28138_[-17QPFPKKFPFS+343EFVPK_482"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1311 <PeptideEvidence dBSequence_ref="DBSeq28473" peptide_ref="Pep_[-17QPFPKKFPFS+343EFVPK" start="482" end="496" pre="K" post="V" isDecoy="false" id="PepEv_28954_[-17QPFPKKFPFS+343EFVPK_482"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1312 <PeptideEvidence dBSequence_ref="DBSeq29285" peptide_ref="Pep_[-17QPFPKKFPFS+343EFVPK" start="482" end="496" pre="K" post="V" isDecoy="false" id="PepEv_29766_[-17QPFPKKFPFS+343EFVPK_482"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1313 <PeptideEvidence dBSequence_ref="DBSeq37511" peptide_ref="Pep_[-17QPFPKKFPFS+343EFVPK" start="482" end="496" pre="K" post="V" isDecoy="false" id="PepEv_37992_[-17QPFPKKFPFS+343EFVPK_482"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1314 <PeptideEvidence dBSequence_ref="DBSeq63026" peptide_ref="Pep_ES+343MKRALEYLRNRRK" start="264" end="278" pre="K" post="E" isDecoy="true" id="PepEv_63289_ES+343MKRALEYLRNRRK_264"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1315 <PeptideEvidence dBSequence_ref="DBSeq63881" peptide_ref="Pep_ES+343MKRALEYLRNRRK" start="264" end="278" pre="K" post="E" isDecoy="true" id="PepEv_64144_ES+343MKRALEYLRNRRK_264"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1316 <PeptideEvidence dBSequence_ref="DBSeq91148" peptide_ref="Pep_ES+343MKRALEYLRNRRK" start="264" end="278" pre="K" post="E" isDecoy="true" id="PepEv_91411_ES+343MKRALEYLRNRRK_264"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1317 <PeptideEvidence dBSequence_ref="DBSeq92003" peptide_ref="Pep_ES+343MKRALEYLRNRRK" start="264" end="278" pre="K" post="E" isDecoy="true" id="PepEv_92266_ES+343MKRALEYLRNRRK_264"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1318 <PeptideEvidence dBSequence_ref="DBSeq104353" peptide_ref="Pep_AM+16GSNMEKVC+343LK" start="367" end="378" pre="K" post="R" isDecoy="true" id="PepEv_104719_AM+16GSNMEKVC+343LK_367"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1319 <PeptideEvidence dBSequence_ref="DBSeq107227" peptide_ref="Pep_AM+16GSNMEKVC+343LK" start="367" end="378" pre="K" post="R" isDecoy="true" id="PepEv_107593_AM+16GSNMEKVC+343LK_367"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1320 <PeptideEvidence dBSequence_ref="DBSeq108359" peptide_ref="Pep_AM+16GSNMEKVC+343LK" start="367" end="378" pre="K" post="R" isDecoy="true" id="PepEv_108725_AM+16GSNMEKVC+343LK_367"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1321 <PeptideEvidence dBSequence_ref="DBSeq109459" peptide_ref="Pep_AM+16GSNMEKVC+343LK" start="367" end="378" pre="K" post="R" isDecoy="true" id="PepEv_109825_AM+16GSNMEKVC+343LK_367"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1322 <PeptideEvidence dBSequence_ref="DBSeq48378" peptide_ref="Pep_LCVKEM+16NS+343GMAK" start="723" end="734" pre="K" post="K" isDecoy="false" id="PepEv_49100_LCVKEM+16NS+343GMAK_723"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1323 <PeptideEvidence dBSequence_ref="DBSeq51252" peptide_ref="Pep_LCVKEM+16NS+343GMAK" start="755" end="766" pre="K" post="K" isDecoy="false" id="PepEv_52006_LCVKEM+16NS+343GMAK_755"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1324 <PeptideEvidence dBSequence_ref="DBSeq52384" peptide_ref="Pep_LCVKEM+16NS+343GMAK" start="723" end="734" pre="K" post="K" isDecoy="false" id="PepEv_53106_LCVKEM+16NS+343GMAK_723"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1325 <PeptideEvidence dBSequence_ref="DBSeq53484" peptide_ref="Pep_LCVKEM+16NS+343GMAK" start="723" end="734" pre="K" post="K" isDecoy="false" id="PepEv_54206_LCVKEM+16NS+343GMAK_723"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1326 <PeptideEvidence dBSequence_ref="DBSeq64736" peptide_ref="Pep_KLSHNS+343M+16LPK" start="196" end="205" pre="K" post="P" isDecoy="true" id="PepEv_64931_KLSHNS+343M+16LPK_196"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1327 <PeptideEvidence dBSequence_ref="DBSeq8761" peptide_ref="Pep_PLM+16S+343NHSLKK" start="385" end="394" pre="K" post="F" isDecoy="false" id="PepEv_9145_PLM+16S+343NHSLKK_385"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1328 <PeptideEvidence dBSequence_ref="DBSeq65480" peptide_ref="Pep_RLYNWS+343ILSK" start="6569" end="6578" pre="K" post="T" isDecoy="true" id="PepEv_72048_RLYNWS+343ILSK_6569"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1329 <PeptideEvidence dBSequence_ref="DBSeq73091" peptide_ref="Pep_RLYNWS+343ILSK" start="4459" end="4468" pre="K" post="T" isDecoy="true" id="PepEv_77549_RLYNWS+343ILSK_4459"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1330 <PeptideEvidence dBSequence_ref="DBSeq94489" peptide_ref="Pep_RLYNWS+343ILSK" start="4459" end="4468" pre="K" post="T" isDecoy="true" id="PepEv_98947_RLYNWS+343ILSK_4459"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1331 <PeptideEvidence dBSequence_ref="DBSeq65480" peptide_ref="Pep_RLYNWSILS+343K" start="6569" end="6578" pre="K" post="T" isDecoy="true" id="PepEv_72048_RLYNWSILS+343K_6569"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1332 <PeptideEvidence dBSequence_ref="DBSeq73091" peptide_ref="Pep_RLYNWSILS+343K" start="4459" end="4468" pre="K" post="T" isDecoy="true" id="PepEv_77549_RLYNWSILS+343K_4459"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1333 <PeptideEvidence dBSequence_ref="DBSeq94489" peptide_ref="Pep_RLYNWSILS+343K" start="4459" end="4468" pre="K" post="T" isDecoy="true" id="PepEv_98947_RLYNWSILS+343K_4459"/>
2
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1334 <PeptideEvidence dBSequence_ref="DBSeq65480" peptide_ref="Pep_RDDLLRQLLK" start="2171" end="2180" pre="K" post="Q" isDecoy="true" id="PepEv_67650_RDDLLRQLLK_2171"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1335 <PeptideEvidence dBSequence_ref="DBSeq73091" peptide_ref="Pep_RDDLLRQLLK" start="2101" end="2110" pre="K" post="Q" isDecoy="true" id="PepEv_75191_RDDLLRQLLK_2101"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1336 <PeptideEvidence dBSequence_ref="DBSeq94489" peptide_ref="Pep_RDDLLRQLLK" start="2101" end="2110" pre="K" post="Q" isDecoy="true" id="PepEv_96589_RDDLLRQLLK_2101"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1337 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_LLQRLLDDRK" start="5432" end="5441" pre="K" post="A" isDecoy="false" id="PepEv_14936_LLQRLLDDRK_5432"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1338 <PeptideEvidence dBSequence_ref="DBSeq17116" peptide_ref="Pep_LLQRLLDDRK" start="3390" end="3399" pre="K" post="A" isDecoy="false" id="PepEv_20505_LLQRLLDDRK_3390"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1339 <PeptideEvidence dBSequence_ref="DBSeq38514" peptide_ref="Pep_LLQRLLDDRK" start="3314" end="3323" pre="K" post="A" isDecoy="false" id="PepEv_41827_LLQRLLDDRK_3314"/>
8
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1340 <PeptideEvidence dBSequence_ref="DBSeq65480" peptide_ref="Pep_NLNEWANNM+16EDIS+343KKVEPK" start="1361" end="1379" pre="K" post="E" isDecoy="true" id="PepEv_66840_NLNEWANNM+16EDIS+343KKVEPK_1361"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1341 <PeptideEvidence dBSequence_ref="DBSeq73091" peptide_ref="Pep_NLNEWANNM+16EDIS+343KKVEPK" start="1291" end="1309" pre="K" post="E" isDecoy="true" id="PepEv_74381_NLNEWANNM+16EDIS+343KKVEPK_1291"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1342 <PeptideEvidence dBSequence_ref="DBSeq94489" peptide_ref="Pep_NLNEWANNM+16EDIS+343KKVEPK" start="1291" end="1309" pre="K" post="E" isDecoy="true" id="PepEv_95779_NLNEWANNM+16EDIS+343KKVEPK_1291"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1343 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_PEVKKS+343IDEM+16NNAWENLNK" start="6233" end="6251" pre="K" post="T" isDecoy="false" id="PepEv_15737_PEVKKS+343IDEM+16NNAWENLNK_6233"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1344 <PeptideEvidence dBSequence_ref="DBSeq17116" peptide_ref="Pep_PEVKKS+343IDEM+16NNAWENLNK" start="4191" end="4209" pre="K" post="T" isDecoy="false" id="PepEv_21306_PEVKKS+343IDEM+16NNAWENLNK_4191"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1345 <PeptideEvidence dBSequence_ref="DBSeq38514" peptide_ref="Pep_PEVKKS+343IDEM+16NNAWENLNK" start="4115" end="4133" pre="K" post="T" isDecoy="false" id="PepEv_42628_PEVKKS+343IDEM+16NNAWENLNK_4115"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1346 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_LVS+343DANEQYK" start="5796" end="5805" pre="K" post="L" isDecoy="false" id="PepEv_15300_LVS+343DANEQYK_5796"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1347 <PeptideEvidence dBSequence_ref="DBSeq17116" peptide_ref="Pep_LVS+343DANEQYK" start="3754" end="3763" pre="K" post="L" isDecoy="false" id="PepEv_20869_LVS+343DANEQYK_3754"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1348 <PeptideEvidence dBSequence_ref="DBSeq38514" peptide_ref="Pep_LVS+343DANEQYK" start="3678" end="3687" pre="K" post="L" isDecoy="false" id="PepEv_42191_LVS+343DANEQYK_3678"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1349 <PeptideEvidence dBSequence_ref="DBSeq65480" peptide_ref="Pep_YQENADS+343VLK" start="1807" end="1816" pre="K" post="D" isDecoy="true" id="PepEv_67286_YQENADS+343VLK_1807"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1350 <PeptideEvidence dBSequence_ref="DBSeq73091" peptide_ref="Pep_YQENADS+343VLK" start="1737" end="1746" pre="K" post="D" isDecoy="true" id="PepEv_74827_YQENADS+343VLK_1737"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1351 <PeptideEvidence dBSequence_ref="DBSeq94489" peptide_ref="Pep_YQENADS+343VLK" start="1737" end="1746" pre="K" post="D" isDecoy="true" id="PepEv_96225_YQENADS+343VLK_1737"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1352 <PeptideEvidence dBSequence_ref="DBSeq23283" peptide_ref="Pep_[-17QM+16EAESISSSEQKHIQK" start="74" end="90" pre="K" post="E" isDecoy="false" id="PepEv_23356_[-17QM+16EAESISSSEQKHIQK_74"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1353 <PeptideEvidence dBSequence_ref="DBSeq79465" peptide_ref="Pep_[-17QQAHIGEKMS+343HLRELQPVK" start="69" end="87" pre="K" post="Y" isDecoy="true" id="PepEv_79533_[-17QQAHIGEKMS+343HLRELQPVK_69"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1354 <PeptideEvidence dBSequence_ref="DBSeq65480" peptide_ref="Pep_EDHELC+343LQRTFVNK" start="4187" end="4200" pre="K" post="T" isDecoy="true" id="PepEv_69666_EDHELC+343LQRTFVNK_4187"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1355 <PeptideEvidence dBSequence_ref="DBSeq46622" peptide_ref="Pep_[-17QEKNMAINPS+343K" start="37" end="47" pre="K" post="E" isDecoy="false" id="PepEv_46658_[-17QEKNMAINPS+343K_37"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1356 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_S+343FPQNPVELK" start="417" end="426" pre="K" post="A" isDecoy="false" id="PepEv_9921_S+343FPQNPVELK_417"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1357 <PeptideEvidence dBSequence_ref="DBSeq17116" peptide_ref="Pep_S+343FPQNPVELK" start="417" end="426" pre="K" post="A" isDecoy="false" id="PepEv_17532_S+343FPQNPVELK_417"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1358 <PeptideEvidence dBSequence_ref="DBSeq38514" peptide_ref="Pep_S+343FPQNPVELK" start="341" end="350" pre="K" post="A" isDecoy="false" id="PepEv_38854_S+343FPQNPVELK_341"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1359 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_TRGPAALS+343EEK" start="3067" end="3077" pre="K" post="L" isDecoy="false" id="PepEv_12571_TRGPAALS+343EEK_3067"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1360 <PeptideEvidence dBSequence_ref="DBSeq87068" peptide_ref="Pep_PFMIPFCNDGQIC+343YEECQTK" start="451" end="470" pre="K" post="S" isDecoy="true" id="PepEv_87518_PFMIPFCNDGQIC+343YEECQTK_451"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1361 <PeptideEvidence dBSequence_ref="DBSeq87837" peptide_ref="Pep_PFMIPFCNDGQIC+343YEECQTK" start="451" end="470" pre="K" post="S" isDecoy="true" id="PepEv_88287_PFMIPFCNDGQIC+343YEECQTK_451"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1362 <PeptideEvidence dBSequence_ref="DBSeq88550" peptide_ref="Pep_PFMIPFCNDGQIC+343YEECQTK" start="451" end="470" pre="K" post="S" isDecoy="true" id="PepEv_89000_PFMIPFCNDGQIC+343YEECQTK_451"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1363 <PeptideEvidence dBSequence_ref="DBSeq103640" peptide_ref="Pep_PFMIPFCNDGQIC+343YEECQTK" start="451" end="470" pre="K" post="S" isDecoy="true" id="PepEv_104090_PFMIPFCNDGQIC+343YEECQTK_451"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1364 <PeptideEvidence dBSequence_ref="DBSeq87068" peptide_ref="Pep_PFMIPFC+343NDGQICYEECQTK" start="451" end="470" pre="K" post="S" isDecoy="true" id="PepEv_87518_PFMIPFC+343NDGQICYEECQTK_451"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1365 <PeptideEvidence dBSequence_ref="DBSeq87837" peptide_ref="Pep_PFMIPFC+343NDGQICYEECQTK" start="451" end="470" pre="K" post="S" isDecoy="true" id="PepEv_88287_PFMIPFC+343NDGQICYEECQTK_451"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1366 <PeptideEvidence dBSequence_ref="DBSeq88550" peptide_ref="Pep_PFMIPFC+343NDGQICYEECQTK" start="451" end="470" pre="K" post="S" isDecoy="true" id="PepEv_89000_PFMIPFC+343NDGQICYEECQTK_451"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1367 <PeptideEvidence dBSequence_ref="DBSeq103640" peptide_ref="Pep_PFMIPFC+343NDGQICYEECQTK" start="451" end="470" pre="K" post="S" isDecoy="true" id="PepEv_104090_PFMIPFC+343NDGQICYEECQTK_451"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1368 <PeptideEvidence dBSequence_ref="DBSeq65480" peptide_ref="Pep_LHQEVC+343LC+343LQK" start="6753" end="6763" pre="K" post="M" isDecoy="true" id="PepEv_72232_LHQEVC+343LC+343LQK_6753"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1369 <PeptideEvidence dBSequence_ref="DBSeq73091" peptide_ref="Pep_LHQEVC+343LC+343LQK" start="4641" end="4651" pre="K" post="M" isDecoy="true" id="PepEv_77731_LHQEVC+343LC+343LQK_4641"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1370 <PeptideEvidence dBSequence_ref="DBSeq94489" peptide_ref="Pep_LHQEVC+343LC+343LQK" start="4641" end="4651" pre="K" post="M" isDecoy="true" id="PepEv_99129_LHQEVC+343LC+343LQK_4641"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1371 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_QLC+343LC+343VEQHLK" start="849" end="859" pre="K" post="E" isDecoy="false" id="PepEv_10353_QLC+343LC+343VEQHLK_849"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1372 <PeptideEvidence dBSequence_ref="DBSeq17116" peptide_ref="Pep_QLC+343LC+343VEQHLK" start="849" end="859" pre="K" post="E" isDecoy="false" id="PepEv_17964_QLC+343LC+343VEQHLK_849"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1373 <PeptideEvidence dBSequence_ref="DBSeq38514" peptide_ref="Pep_QLC+343LC+343VEQHLK" start="773" end="783" pre="K" post="E" isDecoy="false" id="PepEv_39286_QLC+343LC+343VEQHLK_773"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1374 <PeptideEvidence dBSequence_ref="DBSeq65480" peptide_ref="Pep_NEM+16AM+16CGSNVRQK" start="2447" end="2459" pre="K" post="V" isDecoy="true" id="PepEv_67926_NEM+16AM+16CGSNVRQK_2447"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1375 <PeptideEvidence dBSequence_ref="DBSeq73091" peptide_ref="Pep_NEM+16AM+16CGSNVRQK" start="2377" end="2389" pre="K" post="V" isDecoy="true" id="PepEv_75467_NEM+16AM+16CGSNVRQK_2377"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1376 <PeptideEvidence dBSequence_ref="DBSeq94489" peptide_ref="Pep_NEM+16AM+16CGSNVRQK" start="2377" end="2389" pre="K" post="V" isDecoy="true" id="PepEv_96865_NEM+16AM+16CGSNVRQK_2377"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1377 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_QRVNSGCM+16AM+16ENK" start="5153" end="5165" pre="K" post="L" isDecoy="false" id="PepEv_14657_QRVNSGCM+16AM+16ENK_5153"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1378 <PeptideEvidence dBSequence_ref="DBSeq17116" peptide_ref="Pep_QRVNSGCM+16AM+16ENK" start="3111" end="3123" pre="K" post="L" isDecoy="false" id="PepEv_20226_QRVNSGCM+16AM+16ENK_3111"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1379 <PeptideEvidence dBSequence_ref="DBSeq38514" peptide_ref="Pep_QRVNSGCM+16AM+16ENK" start="3035" end="3047" pre="K" post="L" isDecoy="false" id="PepEv_41548_QRVNSGCM+16AM+16ENK_3035"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1380 <PeptideEvidence dBSequence_ref="DBSeq31093" peptide_ref="Pep_GRTRTAIRNGQVWEES+343LK" start="135" end="152" pre="K" post="R" isDecoy="false" id="PepEv_31227_GRTRTAIRNGQVWEES+343LK_135"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1381 <PeptideEvidence dBSequence_ref="DBSeq31862" peptide_ref="Pep_GRTRTAIRNGQVWEES+343LK" start="79" end="96" pre="K" post="R" isDecoy="false" id="PepEv_31940_GRTRTAIRNGQVWEES+343LK_79"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1382 <PeptideEvidence dBSequence_ref="DBSeq47665" peptide_ref="Pep_GRTRTAIRNGQVWEES+343LK" start="79" end="96" pre="K" post="R" isDecoy="false" id="PepEv_47743_GRTRTAIRNGQVWEES+343LK_79"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1383 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_LPQGYHPNDVEEEWGK" start="468" end="483" pre="K" post="L" isDecoy="false" id="PepEv_9972_LPQGYHPNDVEEEWGK_468"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1384 <PeptideEvidence dBSequence_ref="DBSeq17116" peptide_ref="Pep_LPQGYHPNDVEEEWGK" start="468" end="483" pre="K" post="L" isDecoy="false" id="PepEv_17583_LPQGYHPNDVEEEWGK_468"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1385 <PeptideEvidence dBSequence_ref="DBSeq38514" peptide_ref="Pep_LPQGYHPNDVEEEWGK" start="392" end="407" pre="K" post="L" isDecoy="false" id="PepEv_38905_LPQGYHPNDVEEEWGK_392"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1386 <PeptideEvidence dBSequence_ref="DBSeq84448" peptide_ref="Pep_RFQAFM+16NNKRSTDKM+16K" start="27" end="42" pre="K" post="E" isDecoy="true" id="PepEv_84474_RFQAFM+16NNKRSTDKM+16K_27"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1387 <PeptideEvidence dBSequence_ref="DBSeq28473" peptide_ref="Pep_M+16KDTSRKNNM+16FAQFRK" start="771" end="786" pre="K" post="N" isDecoy="false" id="PepEv_29243_M+16KDTSRKNNM+16FAQFRK_771"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1388 <PeptideEvidence dBSequence_ref="DBSeq104353" peptide_ref="Pep_FLGRIGGNGEES+343ENDK" start="239" end="254" pre="K" post="I" isDecoy="true" id="PepEv_104591_FLGRIGGNGEES+343ENDK_239"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1389 <PeptideEvidence dBSequence_ref="DBSeq107227" peptide_ref="Pep_FLGRIGGNGEES+343ENDK" start="239" end="254" pre="K" post="I" isDecoy="true" id="PepEv_107465_FLGRIGGNGEES+343ENDK_239"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1390 <PeptideEvidence dBSequence_ref="DBSeq108359" peptide_ref="Pep_FLGRIGGNGEES+343ENDK" start="239" end="254" pre="K" post="I" isDecoy="true" id="PepEv_108597_FLGRIGGNGEES+343ENDK_239"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1391 <PeptideEvidence dBSequence_ref="DBSeq109459" peptide_ref="Pep_FLGRIGGNGEES+343ENDK" start="239" end="254" pre="K" post="I" isDecoy="true" id="PepEv_109697_FLGRIGGNGEES+343ENDK_239"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1392 <PeptideEvidence dBSequence_ref="DBSeq48378" peptide_ref="Pep_DNES+343EEGNGGIRGLFK" start="847" end="862" pre="K" post="K" isDecoy="false" id="PepEv_49224_DNES+343EEGNGGIRGLFK_847"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1393 <PeptideEvidence dBSequence_ref="DBSeq51252" peptide_ref="Pep_DNES+343EEGNGGIRGLFK" start="879" end="894" pre="K" post="K" isDecoy="false" id="PepEv_52130_DNES+343EEGNGGIRGLFK_879"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1394 <PeptideEvidence dBSequence_ref="DBSeq52384" peptide_ref="Pep_DNES+343EEGNGGIRGLFK" start="847" end="862" pre="K" post="K" isDecoy="false" id="PepEv_53230_DNES+343EEGNGGIRGLFK_847"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1395 <PeptideEvidence dBSequence_ref="DBSeq53484" peptide_ref="Pep_DNES+343EEGNGGIRGLFK" start="847" end="862" pre="K" post="K" isDecoy="false" id="PepEv_54330_DNES+343EEGNGGIRGLFK_847"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1396 <PeptideEvidence dBSequence_ref="DBSeq79850" peptide_ref="Pep_RCNVARPHLRAYC+343K" start="18" end="31" pre="K" post="R" isDecoy="true" id="PepEv_79867_RCNVARPHLRAYC+343K_18"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1397 <PeptideEvidence dBSequence_ref="DBSeq102315" peptide_ref="Pep_RCNVARPHLRAYC+343K" start="18" end="31" pre="K" post="R" isDecoy="true" id="PepEv_102332_RCNVARPHLRAYC+343K_18"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1398 <PeptideEvidence dBSequence_ref="DBSeq23875" peptide_ref="Pep_C+343YARLHPRAVNCRK" start="99" end="112" pre="K" post="K" isDecoy="false" id="PepEv_23973_C+343YARLHPRAVNCRK_99"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1399 <PeptideEvidence dBSequence_ref="DBSeq46340" peptide_ref="Pep_C+343YARLHPRAVNCRK" start="99" end="112" pre="K" post="K" isDecoy="false" id="PepEv_46438_C+343YARLHPRAVNCRK_99"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1400 <PeptideEvidence dBSequence_ref="DBSeq79465" peptide_ref="Pep_M+16S+343HLRELQPVKYK" start="77" end="89" pre="K" post="K" isDecoy="true" id="PepEv_79541_M+16S+343HLRELQPVKYK_77"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1401 <PeptideEvidence dBSequence_ref="DBSeq99912" peptide_ref="Pep_ERMTEIKPLLC+343AGK" start="398" end="411" pre="K" post="D" isDecoy="true" id="PepEv_100309_ERMTEIKPLLC+343AGK_398"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1402 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_[-17QLCLC+343VEQHLK" start="849" end="859" pre="K" post="E" isDecoy="false" id="PepEv_10353_[-17QLCLC+343VEQHLK_849"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1403 <PeptideEvidence dBSequence_ref="DBSeq17116" peptide_ref="Pep_[-17QLCLC+343VEQHLK" start="849" end="859" pre="K" post="E" isDecoy="false" id="PepEv_17964_[-17QLCLC+343VEQHLK_849"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1404 <PeptideEvidence dBSequence_ref="DBSeq38514" peptide_ref="Pep_[-17QLCLC+343VEQHLK" start="773" end="783" pre="K" post="E" isDecoy="false" id="PepEv_39286_[-17QLCLC+343VEQHLK_773"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1405 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_[-17QLC+343LCVEQHLK" start="849" end="859" pre="K" post="E" isDecoy="false" id="PepEv_10353_[-17QLC+343LCVEQHLK_849"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1406 <PeptideEvidence dBSequence_ref="DBSeq17116" peptide_ref="Pep_[-17QLC+343LCVEQHLK" start="849" end="859" pre="K" post="E" isDecoy="false" id="PepEv_17964_[-17QLC+343LCVEQHLK_849"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1407 <PeptideEvidence dBSequence_ref="DBSeq38514" peptide_ref="Pep_[-17QLC+343LCVEQHLK" start="773" end="783" pre="K" post="E" isDecoy="false" id="PepEv_39286_[-17QLC+343LCVEQHLK_773"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1408 <PeptideEvidence dBSequence_ref="DBSeq43937" peptide_ref="Pep_ECCDKPLLEK" start="300" end="309" pre="K" post="S" isDecoy="false" id="PepEv_44236_ECCDKPLLEK_300"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1409 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_LKETSSFRMRHLQS+343LHK" start="744" end="760" pre="K" post="F" isDecoy="false" id="PepEv_10248_LKETSSFRMRHLQS+343LHK_744"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1410 <PeptideEvidence dBSequence_ref="DBSeq17116" peptide_ref="Pep_LKETSSFRMRHLQS+343LHK" start="744" end="760" pre="K" post="F" isDecoy="false" id="PepEv_17859_LKETSSFRMRHLQS+343LHK_744"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1411 <PeptideEvidence dBSequence_ref="DBSeq38514" peptide_ref="Pep_LKETSSFRMRHLQS+343LHK" start="668" end="684" pre="K" post="F" isDecoy="false" id="PepEv_39181_LKETSSFRMRHLQS+343LHK_668"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1412 <PeptideEvidence dBSequence_ref="DBSeq79258" peptide_ref="Pep_[-17QESSSISEAEM+16QK" start="122" end="134" pre="K" post="I" isDecoy="true" id="PepEv_79379_[-17QESSSISEAEM+16QK_122"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1413 <PeptideEvidence dBSequence_ref="DBSeq23283" peptide_ref="Pep_[-17QM+16EAESISSSEQK" start="74" end="86" pre="K" post="H" isDecoy="false" id="PepEv_23356_[-17QM+16EAESISSSEQK_74"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1414 <PeptideEvidence dBSequence_ref="DBSeq43937" peptide_ref="Pep_QEPERNEC+343FLS+343HK" start="118" end="130" pre="K" post="D" isDecoy="false" id="PepEv_44054_QEPERNEC+343FLS+343HK_118"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1415 <PeptideEvidence dBSequence_ref="DBSeq99912" peptide_ref="Pep_HS+343LFC+343ENREPEQK" start="479" end="491" pre="K" post="E" isDecoy="true" id="PepEv_100390_HS+343LFC+343ENREPEQK_479"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1416 <PeptideEvidence dBSequence_ref="DBSeq83632" peptide_ref="Pep_LDS+343MS+343VDKIEERLK" start="614" end="627" pre="K" post="P" isDecoy="true" id="PepEv_84245_LDS+343MS+343VDKIEERLK_614"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1417 <PeptideEvidence dBSequence_ref="DBSeq84448" peptide_ref="Pep_LDS+343MS+343VDKIEERLK" start="610" end="623" pre="K" post="P" isDecoy="true" id="PepEv_85057_LDS+343MS+343VDKIEERLK_610"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1418 <PeptideEvidence dBSequence_ref="DBSeq85260" peptide_ref="Pep_LDS+343MS+343VDKIEERLK" start="565" end="578" pre="K" post="P" isDecoy="true" id="PepEv_85824_LDS+343MS+343VDKIEERLK_565"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1419 <PeptideEvidence dBSequence_ref="DBSeq93486" peptide_ref="Pep_LDS+343MS+343VDKIEERLK" start="425" end="438" pre="K" post="P" isDecoy="true" id="PepEv_93910_LDS+343MS+343VDKIEERLK_425"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1420 <PeptideEvidence dBSequence_ref="DBSeq27657" peptide_ref="Pep_LREEIKDVS+343MS+343DLK" start="190" end="203" pre="K" post="D" isDecoy="false" id="PepEv_27846_LREEIKDVS+343MS+343DLK_190"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1421 <PeptideEvidence dBSequence_ref="DBSeq28473" peptide_ref="Pep_LREEIKDVS+343MS+343DLK" start="190" end="203" pre="K" post="D" isDecoy="false" id="PepEv_28662_LREEIKDVS+343MS+343DLK_190"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1422 <PeptideEvidence dBSequence_ref="DBSeq29285" peptide_ref="Pep_LREEIKDVS+343MS+343DLK" start="190" end="203" pre="K" post="D" isDecoy="false" id="PepEv_29474_LREEIKDVS+343MS+343DLK_190"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1423 <PeptideEvidence dBSequence_ref="DBSeq37511" peptide_ref="Pep_LREEIKDVS+343MS+343DLK" start="190" end="203" pre="K" post="D" isDecoy="false" id="PepEv_37700_LREEIKDVS+343MS+343DLK_190"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1424 <PeptideEvidence dBSequence_ref="DBSeq43937" peptide_ref="Pep_VASLRETYGDM+16ADCCEK" start="101" end="117" pre="K" post="Q" isDecoy="false" id="PepEv_44037_VASLRETYGDM+16ADCCEK_101"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1425 <PeptideEvidence dBSequence_ref="DBSeq99912" peptide_ref="Pep_ECCDAM+16DGYTERLSAVK" start="492" end="508" pre="K" post="C" isDecoy="true" id="PepEv_100403_ECCDAM+16DGYTERLSAVK_492"/>
2
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1426 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_LQKVAHDLMEIEGEPAPDRK" start="4104" end="4123" pre="K" post="H" isDecoy="false" id="PepEv_13608_LQKVAHDLMEIEGEPAPDRK_4104"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1427 <PeptideEvidence dBSequence_ref="DBSeq17116" peptide_ref="Pep_LQKVAHDLMEIEGEPAPDRK" start="2062" end="2081" pre="K" post="H" isDecoy="false" id="PepEv_19177_LQKVAHDLMEIEGEPAPDRK_2062"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1428 <PeptideEvidence dBSequence_ref="DBSeq38514" peptide_ref="Pep_LQKVAHDLMEIEGEPAPDRK" start="1986" end="2005" pre="K" post="H" isDecoy="false" id="PepEv_40499_LQKVAHDLMEIEGEPAPDRK_1986"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1429 <PeptideEvidence dBSequence_ref="DBSeq65480" peptide_ref="Pep_RDPAPEGEIEMLDHAVKQLK" start="3489" end="3508" pre="K" post="E" isDecoy="true" id="PepEv_68968_RDPAPEGEIEMLDHAVKQLK_3489"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1430 <PeptideEvidence dBSequence_ref="DBSeq73091" peptide_ref="Pep_RDPAPEGEIEMLDHAVKQLK" start="3419" end="3438" pre="K" post="E" isDecoy="true" id="PepEv_76509_RDPAPEGEIEMLDHAVKQLK_3419"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1431 <PeptideEvidence dBSequence_ref="DBSeq94489" peptide_ref="Pep_RDPAPEGEIEMLDHAVKQLK" start="3419" end="3438" pre="K" post="E" isDecoy="true" id="PepEv_97907_RDPAPEGEIEMLDHAVKQLK_3419"/>
8
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1432 <PeptideEvidence dBSequence_ref="DBSeq84448" peptide_ref="Pep_RFQAFMNNKRS+343TDKM+16K" start="27" end="42" pre="K" post="E" isDecoy="true" id="PepEv_84474_RFQAFMNNKRS+343TDKM+16K_27"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1433 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_SM+16ENEDKEETVAK" start="1113" end="1125" pre="K" post="M" isDecoy="false" id="PepEv_10617_SM+16ENEDKEETVAK_1113"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1434 <PeptideEvidence dBSequence_ref="DBSeq17116" peptide_ref="Pep_SM+16ENEDKEETVAK" start="1111" end="1123" pre="K" post="M" isDecoy="false" id="PepEv_18226_SM+16ENEDKEETVAK_1111"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1435 <PeptideEvidence dBSequence_ref="DBSeq38514" peptide_ref="Pep_SM+16ENEDKEETVAK" start="1035" end="1047" pre="K" post="M" isDecoy="false" id="PepEv_39548_SM+16ENEDKEETVAK_1035"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1436 <PeptideEvidence dBSequence_ref="DBSeq65480" peptide_ref="Pep_SRGVLSAVSS+343KS+343QILQEK" start="6681" end="6698" pre="K" post="E" isDecoy="true" id="PepEv_72160_SRGVLSAVSS+343KS+343QILQEK_6681"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1437 <PeptideEvidence dBSequence_ref="DBSeq73091" peptide_ref="Pep_SRGVLSAVSS+343KS+343QILQEK" start="4571" end="4588" pre="K" post="E" isDecoy="true" id="PepEv_77661_SRGVLSAVSS+343KS+343QILQEK_4571"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1438 <PeptideEvidence dBSequence_ref="DBSeq94489" peptide_ref="Pep_SRGVLSAVSS+343KS+343QILQEK" start="4571" end="4588" pre="K" post="E" isDecoy="true" id="PepEv_99059_SRGVLSAVSS+343KS+343QILQEK_4571"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1439 <PeptideEvidence dBSequence_ref="DBSeq65480" peptide_ref="Pep_SRGVLS+343AVSS+343KSQILQEK" start="6681" end="6698" pre="K" post="E" isDecoy="true" id="PepEv_72160_SRGVLS+343AVSS+343KSQILQEK_6681"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1440 <PeptideEvidence dBSequence_ref="DBSeq73091" peptide_ref="Pep_SRGVLS+343AVSS+343KSQILQEK" start="4571" end="4588" pre="K" post="E" isDecoy="true" id="PepEv_77661_SRGVLS+343AVSS+343KSQILQEK_4571"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1441 <PeptideEvidence dBSequence_ref="DBSeq94489" peptide_ref="Pep_SRGVLS+343AVSS+343KSQILQEK" start="4571" end="4588" pre="K" post="E" isDecoy="true" id="PepEv_99059_SRGVLS+343AVSS+343KSQILQEK_4571"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1442 <PeptideEvidence dBSequence_ref="DBSeq65480" peptide_ref="Pep_SRGVLS+343AVS+343SKSQILQEK" start="6681" end="6698" pre="K" post="E" isDecoy="true" id="PepEv_72160_SRGVLS+343AVS+343SKSQILQEK_6681"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1443 <PeptideEvidence dBSequence_ref="DBSeq73091" peptide_ref="Pep_SRGVLS+343AVS+343SKSQILQEK" start="4571" end="4588" pre="K" post="E" isDecoy="true" id="PepEv_77661_SRGVLS+343AVS+343SKSQILQEK_4571"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1444 <PeptideEvidence dBSequence_ref="DBSeq94489" peptide_ref="Pep_SRGVLS+343AVS+343SKSQILQEK" start="4571" end="4588" pre="K" post="E" isDecoy="true" id="PepEv_99059_SRGVLS+343AVS+343SKSQILQEK_4571"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1445 <PeptideEvidence dBSequence_ref="DBSeq65480" peptide_ref="Pep_SRGVLSAVS+343SKS+343QILQEK" start="6681" end="6698" pre="K" post="E" isDecoy="true" id="PepEv_72160_SRGVLSAVS+343SKS+343QILQEK_6681"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1446 <PeptideEvidence dBSequence_ref="DBSeq73091" peptide_ref="Pep_SRGVLSAVS+343SKS+343QILQEK" start="4571" end="4588" pre="K" post="E" isDecoy="true" id="PepEv_77661_SRGVLSAVS+343SKS+343QILQEK_4571"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1447 <PeptideEvidence dBSequence_ref="DBSeq94489" peptide_ref="Pep_SRGVLSAVS+343SKS+343QILQEK" start="4571" end="4588" pre="K" post="E" isDecoy="true" id="PepEv_99059_SRGVLSAVS+343SKS+343QILQEK_4571"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1448 <PeptideEvidence dBSequence_ref="DBSeq65480" peptide_ref="Pep_SRGVLS+343AVSSKS+343QILQEK" start="6681" end="6698" pre="K" post="E" isDecoy="true" id="PepEv_72160_SRGVLS+343AVSSKS+343QILQEK_6681"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1449 <PeptideEvidence dBSequence_ref="DBSeq73091" peptide_ref="Pep_SRGVLS+343AVSSKS+343QILQEK" start="4571" end="4588" pre="K" post="E" isDecoy="true" id="PepEv_77661_SRGVLS+343AVSSKS+343QILQEK_4571"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1450 <PeptideEvidence dBSequence_ref="DBSeq94489" peptide_ref="Pep_SRGVLS+343AVSSKS+343QILQEK" start="4571" end="4588" pre="K" post="E" isDecoy="true" id="PepEv_99059_SRGVLS+343AVSSKS+343QILQEK_4571"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1451 <PeptideEvidence dBSequence_ref="DBSeq65480" peptide_ref="Pep_SRGVLSAVS+343S+343KSQILQEK" start="6681" end="6698" pre="K" post="E" isDecoy="true" id="PepEv_72160_SRGVLSAVS+343S+343KSQILQEK_6681"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1452 <PeptideEvidence dBSequence_ref="DBSeq73091" peptide_ref="Pep_SRGVLSAVS+343S+343KSQILQEK" start="4571" end="4588" pre="K" post="E" isDecoy="true" id="PepEv_77661_SRGVLSAVS+343S+343KSQILQEK_4571"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1453 <PeptideEvidence dBSequence_ref="DBSeq94489" peptide_ref="Pep_SRGVLSAVS+343S+343KSQILQEK" start="4571" end="4588" pre="K" post="E" isDecoy="true" id="PepEv_99059_SRGVLSAVS+343S+343KSQILQEK_4571"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1454 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_KS+343IDEM+16NNAWENLNK" start="6237" end="6251" pre="K" post="T" isDecoy="false" id="PepEv_15741_KS+343IDEM+16NNAWENLNK_6237"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1455 <PeptideEvidence dBSequence_ref="DBSeq17116" peptide_ref="Pep_KS+343IDEM+16NNAWENLNK" start="4195" end="4209" pre="K" post="T" isDecoy="false" id="PepEv_21310_KS+343IDEM+16NNAWENLNK_4195"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1456 <PeptideEvidence dBSequence_ref="DBSeq38514" peptide_ref="Pep_KS+343IDEM+16NNAWENLNK" start="4119" end="4133" pre="K" post="T" isDecoy="false" id="PepEv_42632_KS+343IDEM+16NNAWENLNK_4119"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1457 <PeptideEvidence dBSequence_ref="DBSeq65480" peptide_ref="Pep_NLNEWANNM+16EDIS+343KK" start="1361" end="1375" pre="K" post="V" isDecoy="true" id="PepEv_66840_NLNEWANNM+16EDIS+343KK_1361"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1458 <PeptideEvidence dBSequence_ref="DBSeq73091" peptide_ref="Pep_NLNEWANNM+16EDIS+343KK" start="1291" end="1305" pre="K" post="V" isDecoy="true" id="PepEv_74381_NLNEWANNM+16EDIS+343KK_1291"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1459 <PeptideEvidence dBSequence_ref="DBSeq94489" peptide_ref="Pep_NLNEWANNM+16EDIS+343KK" start="1291" end="1305" pre="K" post="V" isDecoy="true" id="PepEv_95779_NLNEWANNM+16EDIS+343KK_1291"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1460 <PeptideEvidence dBSequence_ref="DBSeq65480" peptide_ref="Pep_VKES+343LDQLLEQYQTS+343K" start="2864" end="2879" pre="K" post="V" isDecoy="true" id="PepEv_68343_VKES+343LDQLLEQYQTS+343K_2864"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1461 <PeptideEvidence dBSequence_ref="DBSeq73091" peptide_ref="Pep_VKES+343LDQLLEQYQTS+343K" start="2794" end="2809" pre="K" post="V" isDecoy="true" id="PepEv_75884_VKES+343LDQLLEQYQTS+343K_2794"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1462 <PeptideEvidence dBSequence_ref="DBSeq94489" peptide_ref="Pep_VKES+343LDQLLEQYQTS+343K" start="2794" end="2809" pre="K" post="V" isDecoy="true" id="PepEv_97282_VKES+343LDQLLEQYQTS+343K_2794"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1463 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_S+343TQYQELLQDLS+343EKVK" start="4733" end="4748" pre="K" post="A" isDecoy="false" id="PepEv_14237_S+343TQYQELLQDLS+343EKVK_4733"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1464 <PeptideEvidence dBSequence_ref="DBSeq17116" peptide_ref="Pep_S+343TQYQELLQDLS+343EKVK" start="2691" end="2706" pre="K" post="A" isDecoy="false" id="PepEv_19806_S+343TQYQELLQDLS+343EKVK_2691"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1465 <PeptideEvidence dBSequence_ref="DBSeq38514" peptide_ref="Pep_S+343TQYQELLQDLS+343EKVK" start="2615" end="2630" pre="K" post="A" isDecoy="false" id="PepEv_41128_S+343TQYQELLQDLS+343EKVK_2615"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1466 <PeptideEvidence dBSequence_ref="DBSeq3312" peptide_ref="Pep_MAFRDVAVAFTQK" start="1" end="13" pre="-" post="E" isDecoy="false" id="PepEv_3312_MAFRDVAVAFTQK_1"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1467 <PeptideEvidence dBSequence_ref="DBSeq27068" peptide_ref="Pep_MAFRDVAVAFTQK" start="1" end="13" pre="-" post="E" isDecoy="false" id="PepEv_27068_MAFRDVAVAFTQK_1"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1468 <PeptideEvidence dBSequence_ref="DBSeq3901" peptide_ref="Pep_ES+343TLHLVLRLRGGC+343" start="64" end="77" pre="K" post="-" isDecoy="false" id="PepEv_3964_ES+343TLHLVLRLRGGC+343_64"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1469 <PeptideEvidence dBSequence_ref="DBSeq30388" peptide_ref="Pep_ES+343TLHLVLRLRGGC+343" start="64" end="77" pre="K" post="-" isDecoy="false" id="PepEv_30451_ES+343TLHLVLRLRGGC+343_64"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1470 <PeptideEvidence dBSequence_ref="DBSeq33261" peptide_ref="Pep_ES+343TLHLVLRLRGGC+343" start="292" end="305" pre="K" post="-" isDecoy="false" id="PepEv_33552_ES+343TLHLVLRLRGGC+343_292"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1471 <PeptideEvidence dBSequence_ref="DBSeq33567" peptide_ref="Pep_ES+343TLHLVLRLRGGC+343" start="292" end="305" pre="K" post="-" isDecoy="false" id="PepEv_33858_ES+343TLHLVLRLRGGC+343_292"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1472 <PeptideEvidence dBSequence_ref="DBSeq44545" peptide_ref="Pep_ES+343TLHLVLRLRGGC+343" start="292" end="305" pre="K" post="-" isDecoy="false" id="PepEv_44836_ES+343TLHLVLRLRGGC+343_292"/>
2
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1473 <PeptideEvidence dBSequence_ref="DBSeq104353" peptide_ref="Pep_ILWAQKKAMGSNMEKVCLK" start="360" end="378" pre="K" post="R" isDecoy="true" id="PepEv_104712_ILWAQKKAMGSNMEKVCLK_360"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1474 <PeptideEvidence dBSequence_ref="DBSeq107227" peptide_ref="Pep_ILWAQKKAMGSNMEKVCLK" start="360" end="378" pre="K" post="R" isDecoy="true" id="PepEv_107586_ILWAQKKAMGSNMEKVCLK_360"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1475 <PeptideEvidence dBSequence_ref="DBSeq108359" peptide_ref="Pep_ILWAQKKAMGSNMEKVCLK" start="360" end="378" pre="K" post="R" isDecoy="true" id="PepEv_108718_ILWAQKKAMGSNMEKVCLK_360"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1476 <PeptideEvidence dBSequence_ref="DBSeq109459" peptide_ref="Pep_ILWAQKKAMGSNMEKVCLK" start="360" end="378" pre="K" post="R" isDecoy="true" id="PepEv_109818_ILWAQKKAMGSNMEKVCLK_360"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1477 <PeptideEvidence dBSequence_ref="DBSeq48378" peptide_ref="Pep_LCVKEMNSGMAKKQAWLIK" start="723" end="741" pre="K" post="N" isDecoy="false" id="PepEv_49100_LCVKEMNSGMAKKQAWLIK_723"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1478 <PeptideEvidence dBSequence_ref="DBSeq51252" peptide_ref="Pep_LCVKEMNSGMAKKQAWLIK" start="755" end="773" pre="K" post="N" isDecoy="false" id="PepEv_52006_LCVKEMNSGMAKKQAWLIK_755"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1479 <PeptideEvidence dBSequence_ref="DBSeq52384" peptide_ref="Pep_LCVKEMNSGMAKKQAWLIK" start="723" end="741" pre="K" post="N" isDecoy="false" id="PepEv_53106_LCVKEMNSGMAKKQAWLIK_723"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1480 <PeptideEvidence dBSequence_ref="DBSeq53484" peptide_ref="Pep_LCVKEMNSGMAKKQAWLIK" start="723" end="741" pre="K" post="N" isDecoy="false" id="PepEv_54206_LCVKEMNSGMAKKQAWLIK_723"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1481 <PeptideEvidence dBSequence_ref="DBSeq89236" peptide_ref="Pep_VFIQMGGRLRLVLHLTSEK" start="73" end="91" pre="K" post="Q" isDecoy="true" id="PepEv_89308_VFIQMGGRLRLVLHLTSEK_73"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1482 <PeptideEvidence dBSequence_ref="DBSeq89236" peptide_ref="Pep_VFIQMGGRLRLVLHLTSEK" start="149" end="167" pre="K" post="Q" isDecoy="true" id="PepEv_89384_VFIQMGGRLRLVLHLTSEK_149"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1483 <PeptideEvidence dBSequence_ref="DBSeq89236" peptide_ref="Pep_VFIQMGGRLRLVLHLTSEK" start="225" end="243" pre="K" post="Q" isDecoy="true" id="PepEv_89460_VFIQMGGRLRLVLHLTSEK_225"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1484 <PeptideEvidence dBSequence_ref="DBSeq89542" peptide_ref="Pep_VFIQMGGRLRLVLHLTSEK" start="73" end="91" pre="K" post="Q" isDecoy="true" id="PepEv_89614_VFIQMGGRLRLVLHLTSEK_73"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1485 <PeptideEvidence dBSequence_ref="DBSeq89542" peptide_ref="Pep_VFIQMGGRLRLVLHLTSEK" start="149" end="167" pre="K" post="Q" isDecoy="true" id="PepEv_89690_VFIQMGGRLRLVLHLTSEK_149"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1486 <PeptideEvidence dBSequence_ref="DBSeq89542" peptide_ref="Pep_VFIQMGGRLRLVLHLTSEK" start="225" end="243" pre="K" post="Q" isDecoy="true" id="PepEv_89766_VFIQMGGRLRLVLHLTSEK_225"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1487 <PeptideEvidence dBSequence_ref="DBSeq100520" peptide_ref="Pep_VFIQMGGRLRLVLHLTSEK" start="73" end="91" pre="K" post="Q" isDecoy="true" id="PepEv_100592_VFIQMGGRLRLVLHLTSEK_73"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1488 <PeptideEvidence dBSequence_ref="DBSeq100520" peptide_ref="Pep_VFIQMGGRLRLVLHLTSEK" start="149" end="167" pre="K" post="Q" isDecoy="true" id="PepEv_100668_VFIQMGGRLRLVLHLTSEK_149"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1489 <PeptideEvidence dBSequence_ref="DBSeq100520" peptide_ref="Pep_VFIQMGGRLRLVLHLTSEK" start="225" end="243" pre="K" post="Q" isDecoy="true" id="PepEv_100744_VFIQMGGRLRLVLHLTSEK_225"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1490 <PeptideEvidence dBSequence_ref="DBSeq101624" peptide_ref="Pep_VFIQMGGRLRLVLHLTSEK" start="78" end="96" pre="K" post="Q" isDecoy="true" id="PepEv_101701_VFIQMGGRLRLVLHLTSEK_78"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1491 <PeptideEvidence dBSequence_ref="DBSeq101624" peptide_ref="Pep_VFIQMGGRLRLVLHLTSEK" start="154" end="172" pre="K" post="Q" isDecoy="true" id="PepEv_101777_VFIQMGGRLRLVLHLTSEK_154"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1492 <PeptideEvidence dBSequence_ref="DBSeq101624" peptide_ref="Pep_VFIQMGGRLRLVLHLTSEK" start="230" end="248" pre="K" post="Q" isDecoy="true" id="PepEv_101853_VFIQMGGRLRLVLHLTSEK_230"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1493 <PeptideEvidence dBSequence_ref="DBSeq101624" peptide_ref="Pep_VFIQMGGRLRLVLHLTSEK" start="306" end="324" pre="K" post="Q" isDecoy="true" id="PepEv_101929_VFIQMGGRLRLVLHLTSEK_306"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1494 <PeptideEvidence dBSequence_ref="DBSeq101624" peptide_ref="Pep_VFIQMGGRLRLVLHLTSEK" start="382" end="400" pre="K" post="Q" isDecoy="true" id="PepEv_102005_VFIQMGGRLRLVLHLTSEK_382"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1495 <PeptideEvidence dBSequence_ref="DBSeq101624" peptide_ref="Pep_VFIQMGGRLRLVLHLTSEK" start="458" end="476" pre="K" post="Q" isDecoy="true" id="PepEv_102081_VFIQMGGRLRLVLHLTSEK_458"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1496 <PeptideEvidence dBSequence_ref="DBSeq101624" peptide_ref="Pep_VFIQMGGRLRLVLHLTSEK" start="534" end="552" pre="K" post="Q" isDecoy="true" id="PepEv_102157_VFIQMGGRLRLVLHLTSEK_534"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1497 <PeptideEvidence dBSequence_ref="DBSeq101624" peptide_ref="Pep_VFIQMGGRLRLVLHLTSEK" start="610" end="628" pre="K" post="Q" isDecoy="true" id="PepEv_102233_VFIQMGGRLRLVLHLTSEK_610"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1498 <PeptideEvidence dBSequence_ref="DBSeq33261" peptide_ref="Pep_ESTLHLVLRLRGGMQIFVK" start="64" end="82" pre="K" post="T" isDecoy="false" id="PepEv_33324_ESTLHLVLRLRGGMQIFVK_64"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1499 <PeptideEvidence dBSequence_ref="DBSeq33261" peptide_ref="Pep_ESTLHLVLRLRGGMQIFVK" start="140" end="158" pre="K" post="T" isDecoy="false" id="PepEv_33400_ESTLHLVLRLRGGMQIFVK_140"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1500 <PeptideEvidence dBSequence_ref="DBSeq33261" peptide_ref="Pep_ESTLHLVLRLRGGMQIFVK" start="216" end="234" pre="K" post="T" isDecoy="false" id="PepEv_33476_ESTLHLVLRLRGGMQIFVK_216"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1501 <PeptideEvidence dBSequence_ref="DBSeq33567" peptide_ref="Pep_ESTLHLVLRLRGGMQIFVK" start="64" end="82" pre="K" post="T" isDecoy="false" id="PepEv_33630_ESTLHLVLRLRGGMQIFVK_64"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1502 <PeptideEvidence dBSequence_ref="DBSeq33567" peptide_ref="Pep_ESTLHLVLRLRGGMQIFVK" start="140" end="158" pre="K" post="T" isDecoy="false" id="PepEv_33706_ESTLHLVLRLRGGMQIFVK_140"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1503 <PeptideEvidence dBSequence_ref="DBSeq33567" peptide_ref="Pep_ESTLHLVLRLRGGMQIFVK" start="216" end="234" pre="K" post="T" isDecoy="false" id="PepEv_33782_ESTLHLVLRLRGGMQIFVK_216"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1504 <PeptideEvidence dBSequence_ref="DBSeq44545" peptide_ref="Pep_ESTLHLVLRLRGGMQIFVK" start="64" end="82" pre="K" post="T" isDecoy="false" id="PepEv_44608_ESTLHLVLRLRGGMQIFVK_64"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1505 <PeptideEvidence dBSequence_ref="DBSeq44545" peptide_ref="Pep_ESTLHLVLRLRGGMQIFVK" start="140" end="158" pre="K" post="T" isDecoy="false" id="PepEv_44684_ESTLHLVLRLRGGMQIFVK_140"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1506 <PeptideEvidence dBSequence_ref="DBSeq44545" peptide_ref="Pep_ESTLHLVLRLRGGMQIFVK" start="216" end="234" pre="K" post="T" isDecoy="false" id="PepEv_44760_ESTLHLVLRLRGGMQIFVK_216"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1507 <PeptideEvidence dBSequence_ref="DBSeq45649" peptide_ref="Pep_ESTLHLVLRLRGGMQIFVK" start="64" end="82" pre="K" post="T" isDecoy="false" id="PepEv_45712_ESTLHLVLRLRGGMQIFVK_64"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1508 <PeptideEvidence dBSequence_ref="DBSeq45649" peptide_ref="Pep_ESTLHLVLRLRGGMQIFVK" start="140" end="158" pre="K" post="T" isDecoy="false" id="PepEv_45788_ESTLHLVLRLRGGMQIFVK_140"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1509 <PeptideEvidence dBSequence_ref="DBSeq45649" peptide_ref="Pep_ESTLHLVLRLRGGMQIFVK" start="216" end="234" pre="K" post="T" isDecoy="false" id="PepEv_45864_ESTLHLVLRLRGGMQIFVK_216"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1510 <PeptideEvidence dBSequence_ref="DBSeq45649" peptide_ref="Pep_ESTLHLVLRLRGGMQIFVK" start="292" end="310" pre="K" post="T" isDecoy="false" id="PepEv_45940_ESTLHLVLRLRGGMQIFVK_292"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1511 <PeptideEvidence dBSequence_ref="DBSeq45649" peptide_ref="Pep_ESTLHLVLRLRGGMQIFVK" start="368" end="386" pre="K" post="T" isDecoy="false" id="PepEv_46016_ESTLHLVLRLRGGMQIFVK_368"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1512 <PeptideEvidence dBSequence_ref="DBSeq45649" peptide_ref="Pep_ESTLHLVLRLRGGMQIFVK" start="444" end="462" pre="K" post="T" isDecoy="false" id="PepEv_46092_ESTLHLVLRLRGGMQIFVK_444"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1513 <PeptideEvidence dBSequence_ref="DBSeq45649" peptide_ref="Pep_ESTLHLVLRLRGGMQIFVK" start="520" end="538" pre="K" post="T" isDecoy="false" id="PepEv_46168_ESTLHLVLRLRGGMQIFVK_520"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1514 <PeptideEvidence dBSequence_ref="DBSeq45649" peptide_ref="Pep_ESTLHLVLRLRGGMQIFVK" start="596" end="614" pre="K" post="T" isDecoy="false" id="PepEv_46244_ESTLHLVLRLRGGMQIFVK_596"/>
8
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1515 <PeptideEvidence dBSequence_ref="DBSeq9505" peptide_ref="Pep_[-17QTVEAYSAAVQSQLQWMK" start="831" end="848" pre="K" post="Q" isDecoy="false" id="PepEv_10335_[-17QTVEAYSAAVQSQLQWMK_831"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1516 <PeptideEvidence dBSequence_ref="DBSeq17116" peptide_ref="Pep_[-17QTVEAYSAAVQSQLQWMK" start="831" end="848" pre="K" post="Q" isDecoy="false" id="PepEv_17946_[-17QTVEAYSAAVQSQLQWMK_831"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1517 <PeptideEvidence dBSequence_ref="DBSeq38514" peptide_ref="Pep_[-17QTVEAYSAAVQSQLQWMK" start="755" end="772" pre="K" post="Q" isDecoy="false" id="PepEv_39268_[-17QTVEAYSAAVQSQLQWMK_755"/>
2
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1518 </SequenceCollection>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1519 <AnalysisCollection xmlns="http://psidev.info/psi/pi/mzIdentML/1.1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1520 <SpectrumIdentification spectrumIdentificationProtocol_ref="SearchProtocol_1" spectrumIdentificationList_ref="SI_LIST_1" id="SpecIdent_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1521 <InputSpectra spectraData_ref="SID_1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1522 <SearchDatabaseRef searchDatabase_ref="SearchDB_1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1523 </SpectrumIdentification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1524 </AnalysisCollection>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1525 <AnalysisProtocolCollection xmlns="http://psidev.info/psi/pi/mzIdentML/1.1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1526 <SpectrumIdentificationProtocol analysisSoftware_ref="ID_software" id="SearchProtocol_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1527 <SearchType>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1528 <cvParam cvRef="PSI-MS" accession="MS:1001083" name="ms-ms search"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1529 </SearchType>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1530 <AdditionalSearchParams>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1531 <cvParam cvRef="PSI-MS" accession="MS:1001211" name="parent mass type mono"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1532 <cvParam cvRef="PSI-MS" accession="MS:1001256" name="fragment mass type mono"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1533 <userParam name="TargetDecoyApproach" value="true"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1534 <userParam name="MinIsotopeError" value="-1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1535 <userParam name="MaxIsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1536 <userParam name="FragmentMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1537 <userParam name="Instrument" value="QExactive"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1538 <userParam name="Protocol" value="iTRAQ"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1539 <userParam name="NumTolerableTermini" value="2"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1540 <userParam name="NumMatchesPerSpec" value="2"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1541 <userParam name="MaxNumModifications" value="2"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1542 <userParam name="MinPepLength" value="10"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1543 <userParam name="MaxPepLength" value="20"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1544 <userParam name="MinCharge" value="2"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1545 <userParam name="MaxCharge" value="6"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1546 <userParam name="ChargeCarrierMass" value="1.00727649"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1547 </AdditionalSearchParams>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1548 <ModificationParams>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1551 </SearchModification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1553 <SpecificityRules>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1555 </SpecificityRules>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1557 </SearchModification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1560 </SearchModification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1563 </SearchModification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1565 <SpecificityRules>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1567 </SpecificityRules>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1569 </SearchModification>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1571 <SpecificityRules>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1573 </SpecificityRules>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1575 </SearchModification>
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1578 </SearchModification>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1581 </SearchModification>
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1582 </ModificationParams>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1583 <Enzymes>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1584 <Enzyme semiSpecific="false" missedCleavages="1000" id="LysC">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1585 <EnzymeName>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1586 <cvParam cvRef="PSI-MS" accession="MS:1001309" name="Lys-C"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1587 </EnzymeName>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1588 </Enzyme>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1589 </Enzymes>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1590 <ParentTolerance>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1591 <cvParam cvRef="PSI-MS" accession="MS:1001412" name="search tolerance plus value" value="0.02" unitAccession="UO:0000221" unitName="dalton" unitCvRef="UO"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1593 </ParentTolerance>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1594 <Threshold>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1595 <cvParam cvRef="PSI-MS" accession="MS:1001494" name="no threshold"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1596 </Threshold>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1597 </SpectrumIdentificationProtocol>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1598 </AnalysisProtocolCollection>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1599 <DataCollection xmlns="http://psidev.info/psi/pi/mzIdentML/1.1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1600 <Inputs>
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1601 <SearchDatabase numDatabaseSequences="144" location="/home/ubuntu/stortes_raumhafen/git/galaxy/database/jobs_directory/000/610/working/cow.protein.PRG2012-subset.fasta" id="SearchDB_1">
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1602 <FileFormat>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1603 <cvParam cvRef="PSI-MS" accession="MS:1001348" name="FASTA format"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1604 </FileFormat>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1605 <DatabaseName>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1606 <userParam name="cow.protein.PRG2012-subset.fasta"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1607 </DatabaseName>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1608 <cvParam cvRef="PSI-MS" accession="MS:1001197" name="DB composition target+decoy"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1609 <cvParam cvRef="PSI-MS" accession="MS:1001283" name="decoy DB accession regexp" value="^XXX"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1610 <cvParam cvRef="PSI-MS" accession="MS:1001195" name="decoy DB type reverse"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1611 </SearchDatabase>
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1612 <SpectraData location="/home/ubuntu/stortes_raumhafen/git/galaxy/database/jobs_directory/000/610/working/201208-378803.mzML" id="SID_1" name="201208-378803.mzML">
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1613 <FileFormat>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1614 <cvParam cvRef="PSI-MS" accession="MS:1000584" name="mzML file"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1615 </FileFormat>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1616 <SpectrumIDFormat>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1617 <cvParam cvRef="PSI-MS" accession="MS:1000770" name="WIFF nativeID format"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1618 </SpectrumIDFormat>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1619 </SpectraData>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1620 </Inputs>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1621 <AnalysisData>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1622 <SpectrumIdentificationList id="SI_LIST_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1623 <FragmentationTable>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1624 <Measure id="Measure_MZ">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1626 </Measure>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1627 </FragmentationTable>
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1628 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1222 experiment=2" spectraData_ref="SID_1" id="SIR_83">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
1662 <userParam name="StdevErrorTop7" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
1665 <userParam name="MeanRelErrorTop7" value="4.328511"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
1666 <userParam name="StdevRelErrorTop7" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
1667 </SpectrumIdentificationItem>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1668 </SpectrumIdentificationResult>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
1674 <PeptideEvidenceRef peptideEvidence_ref="PepEv_37992_[-17QPFPKKFPFS+343EFVPK_482"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
1690 <PeptideEvidenceRef peptideEvidence_ref="PepEv_64144_ES+343MKRALEYLRNRRK_264"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
1692 <PeptideEvidenceRef peptideEvidence_ref="PepEv_92266_ES+343MKRALEYLRNRRK_264"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
1699 <userParam name="IsotopeError" value="0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1703 <userParam name="CTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1704 <userParam name="MS2IonCurrent" value="2824.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1705 </SpectrumIdentificationItem>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1706 </SpectrumIdentificationResult>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1707 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1207 experiment=2" spectraData_ref="SID_1" id="SIR_35">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1708 <SpectrumIdentificationItem chargeState="4" experimentalMassToCharge="540.2457885742188" calculatedMassToCharge="540.5006713867188" peptide_ref="Pep_AM+16GSNMEKVC+343LK" rank="1" passThreshold="true" id="SII_35_1">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1709 <PeptideEvidenceRef peptideEvidence_ref="PepEv_104719_AM+16GSNMEKVC+343LK_367"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1710 <PeptideEvidenceRef peptideEvidence_ref="PepEv_107593_AM+16GSNMEKVC+343LK_367"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1711 <PeptideEvidenceRef peptideEvidence_ref="PepEv_108725_AM+16GSNMEKVC+343LK_367"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1712 <PeptideEvidenceRef peptideEvidence_ref="PepEv_109825_AM+16GSNMEKVC+343LK_367"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1713 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-10"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1714 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="88"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1715 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="1.7893981E-4"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1716 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="7.1348667"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1717 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="0.5"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1718 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="0.5"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1719 <userParam name="IsotopeError" value="-1"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1720 <userParam name="AssumedDissociationMethod" value="HCD"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1721 <userParam name="ExplainedIonCurrentRatio" value="0.0025316456"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1722 <userParam name="NTermIonCurrentRatio" value="0.0025316456"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1723 <userParam name="CTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1724 <userParam name="MS2IonCurrent" value="790.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1725 <userParam name="NumMatchedMainIons" value="1"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1726 <userParam name="MeanErrorAll" value="15.702927"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1727 <userParam name="StdevErrorAll" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1728 <userParam name="MeanErrorTop7" value="15.702927"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1729 <userParam name="StdevErrorTop7" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1730 <userParam name="MeanRelErrorAll" value="-15.702927"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1731 <userParam name="StdevRelErrorAll" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1732 <userParam name="MeanRelErrorTop7" value="-15.702927"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1733 <userParam name="StdevRelErrorTop7" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1734 </SpectrumIdentificationItem>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1735 <SpectrumIdentificationItem chargeState="4" experimentalMassToCharge="540.2457885742188" calculatedMassToCharge="540.5006713867188" peptide_ref="Pep_LCVKEM+16NS+343GMAK" rank="2" passThreshold="true" id="SII_35_2">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1736 <PeptideEvidenceRef peptideEvidence_ref="PepEv_49100_LCVKEM+16NS+343GMAK_723"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1737 <PeptideEvidenceRef peptideEvidence_ref="PepEv_52006_LCVKEM+16NS+343GMAK_755"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1738 <PeptideEvidenceRef peptideEvidence_ref="PepEv_53106_LCVKEM+16NS+343GMAK_723"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1739 <PeptideEvidenceRef peptideEvidence_ref="PepEv_54206_LCVKEM+16NS+343GMAK_723"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1740 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-12"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1741 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="88"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1742 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="2.7536333E-4"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1743 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="10.979562"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1744 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1745 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1746 <userParam name="IsotopeError" value="-1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1747 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1748 <userParam name="ExplainedIonCurrentRatio" value="0.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1749 <userParam name="NTermIonCurrentRatio" value="0.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1750 <userParam name="CTermIonCurrentRatio" value="0.0"/>
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1751 <userParam name="MS2IonCurrent" value="790.0"/>
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1752 </SpectrumIdentificationItem>
8
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1753 </SpectrumIdentificationResult>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1754 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1219 experiment=2" spectraData_ref="SID_1" id="SIR_77">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1755 <SpectrumIdentificationItem chargeState="4" experimentalMassToCharge="487.2433166503906" calculatedMassToCharge="487.2474365234375" peptide_ref="Pep_KLSHNS+343M+16LPK" rank="1" passThreshold="true" id="SII_77_1">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1756 <PeptideEvidenceRef peptideEvidence_ref="PepEv_64931_KLSHNS+343M+16LPK_196"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1757 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-11"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1758 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="65"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1759 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="1.9136534E-4"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1760 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="7.5652456"/>
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1761 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1762 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1763 <userParam name="IsotopeError" value="0"/>
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1764 <userParam name="AssumedDissociationMethod" value="HCD"/>
8
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1765 <userParam name="ExplainedIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1766 <userParam name="NTermIonCurrentRatio" value="0.0"/>
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
1767 <userParam name="CTermIonCurrentRatio" value="0.0"/>
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1768 <userParam name="MS2IonCurrent" value="2669.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1769 </SpectrumIdentificationItem>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1770 <SpectrumIdentificationItem chargeState="4" experimentalMassToCharge="487.2433166503906" calculatedMassToCharge="487.2474365234375" peptide_ref="Pep_PLM+16S+343NHSLKK" rank="2" passThreshold="true" id="SII_77_2">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1771 <PeptideEvidenceRef peptideEvidence_ref="PepEv_9145_PLM+16S+343NHSLKK_385"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1772 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-12"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1773 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="65"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1774 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="2.3838083E-4"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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galaxyp
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galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1823 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="519.6590576171875" calculatedMassToCharge="519.994140625" peptide_ref="Pep_RDDLLRQLLK" rank="1" passThreshold="true" id="SII_61_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1824 <PeptideEvidenceRef peptideEvidence_ref="PepEv_67650_RDDLLRQLLK_2171"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
1826 <PeptideEvidenceRef peptideEvidence_ref="PepEv_96589_RDDLLRQLLK_2101"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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1837 <userParam name="CTermIonCurrentRatio" value="0.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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1840 <userParam name="MeanErrorAll" value="17.95661"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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1841 <userParam name="StdevErrorAll" value="0.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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1842 <userParam name="MeanErrorTop7" value="17.95661"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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1843 <userParam name="StdevErrorTop7" value="0.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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1844 <userParam name="MeanRelErrorAll" value="17.95661"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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1845 <userParam name="StdevRelErrorAll" value="0.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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1846 <userParam name="MeanRelErrorTop7" value="17.95661"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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1847 <userParam name="StdevRelErrorTop7" value="0.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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1863 <userParam name="CTermIonCurrentRatio" value="0.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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1866 </SpectrumIdentificationResult>
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
1870 <PeptideEvidenceRef peptideEvidence_ref="PepEv_74381_NLNEWANNM+16EDIS+343KKVEPK_1291"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
1871 <PeptideEvidenceRef peptideEvidence_ref="PepEv_95779_NLNEWANNM+16EDIS+343KKVEPK_1291"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
1877 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
1878 <userParam name="IsotopeError" value="0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
1879 <userParam name="AssumedDissociationMethod" value="HCD"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
1880 <userParam name="ExplainedIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
1881 <userParam name="NTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1882 <userParam name="CTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1883 <userParam name="MS2IonCurrent" value="257.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1884 </SpectrumIdentificationItem>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1885 <SpectrumIdentificationItem chargeState="6" experimentalMassToCharge="533.2622680664062" calculatedMassToCharge="533.2630615234375" peptide_ref="Pep_PEVKKS+343IDEM+16NNAWENLNK" rank="2" passThreshold="true" id="SII_106_2">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1886 <PeptideEvidenceRef peptideEvidence_ref="PepEv_15737_PEVKKS+343IDEM+16NNAWENLNK_6233"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1887 <PeptideEvidenceRef peptideEvidence_ref="PepEv_21306_PEVKKS+343IDEM+16NNAWENLNK_4191"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1888 <PeptideEvidenceRef peptideEvidence_ref="PepEv_42628_PEVKKS+343IDEM+16NNAWENLNK_4115"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
1890 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="48"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
1895 <userParam name="IsotopeError" value="0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
1896 <userParam name="AssumedDissociationMethod" value="HCD"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
1897 <userParam name="ExplainedIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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1898 <userParam name="NTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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1899 <userParam name="CTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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1900 <userParam name="MS2IonCurrent" value="257.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1901 </SpectrumIdentificationItem>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
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1902 </SpectrumIdentificationResult>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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1903 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1200 experiment=3" spectraData_ref="SID_1" id="SIR_22">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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1904 <SpectrumIdentificationItem chargeState="4" experimentalMassToCharge="450.2027587890625" calculatedMassToCharge="450.2066345214844" peptide_ref="Pep_LVS+343DANEQYK" rank="1" passThreshold="true" id="SII_22_1">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1905 <PeptideEvidenceRef peptideEvidence_ref="PepEv_15300_LVS+343DANEQYK_5796"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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1906 <PeptideEvidenceRef peptideEvidence_ref="PepEv_20869_LVS+343DANEQYK_3754"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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1907 <PeptideEvidenceRef peptideEvidence_ref="PepEv_42191_LVS+343DANEQYK_3678"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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1908 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-11"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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1909 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="54"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
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1911 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="13.2708025"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
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1913 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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1914 <userParam name="IsotopeError" value="0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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1915 <userParam name="AssumedDissociationMethod" value="HCD"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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galaxyp
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1917 <userParam name="NTermIonCurrentRatio" value="0.0"/>
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1918 <userParam name="CTermIonCurrentRatio" value="0.001396648"/>
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galaxyp
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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1920 <userParam name="NumMatchedMainIons" value="1"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
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1921 <userParam name="MeanErrorAll" value="2.1449564"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
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1922 <userParam name="StdevErrorAll" value="0.0"/>
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1923 <userParam name="MeanErrorTop7" value="2.1449564"/>
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1924 <userParam name="StdevErrorTop7" value="0.0"/>
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1925 <userParam name="MeanRelErrorAll" value="-2.1449564"/>
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1926 <userParam name="StdevRelErrorAll" value="0.0"/>
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1927 <userParam name="MeanRelErrorTop7" value="-2.1449564"/>
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1928 <userParam name="StdevRelErrorTop7" value="0.0"/>
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1929 </SpectrumIdentificationItem>
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1930 <SpectrumIdentificationItem chargeState="4" experimentalMassToCharge="450.2027587890625" calculatedMassToCharge="450.2066345214844" peptide_ref="Pep_YQENADS+343VLK" rank="2" passThreshold="true" id="SII_22_2">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
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1931 <PeptideEvidenceRef peptideEvidence_ref="PepEv_67286_YQENADS+343VLK_1807"/>
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1932 <PeptideEvidenceRef peptideEvidence_ref="PepEv_74827_YQENADS+343VLK_1737"/>
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1933 <PeptideEvidenceRef peptideEvidence_ref="PepEv_96225_YQENADS+343VLK_1737"/>
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1934 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-21"/>
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1935 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="54"/>
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1936 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="0.002777303"/>
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1937 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="109.79513"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
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1938 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
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1939 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
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1940 <userParam name="IsotopeError" value="0"/>
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1941 <userParam name="AssumedDissociationMethod" value="HCD"/>
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1942 <userParam name="ExplainedIonCurrentRatio" value="0.0"/>
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1943 <userParam name="NTermIonCurrentRatio" value="0.0"/>
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1944 <userParam name="CTermIonCurrentRatio" value="0.0"/>
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1945 <userParam name="MS2IonCurrent" value="716.0"/>
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1946 </SpectrumIdentificationItem>
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1947 </SpectrumIdentificationResult>
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1948 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1212 experiment=4" spectraData_ref="SID_1" id="SIR_52">
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1949 <SpectrumIdentificationItem chargeState="4" experimentalMassToCharge="598.3059692382812" calculatedMassToCharge="598.56005859375" peptide_ref="Pep_[-17QM+16EAESISSSEQKHIQK" rank="1" passThreshold="true" id="SII_52_1">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
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1950 <PeptideEvidenceRef peptideEvidence_ref="PepEv_23356_[-17QM+16EAESISSSEQKHIQK_74"/>
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1951 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-18"/>
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1952 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="68"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
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1953 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="4.2254035E-4"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
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1954 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="17.16866"/>
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1955 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
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1956 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
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1957 <userParam name="IsotopeError" value="-1"/>
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1958 <userParam name="AssumedDissociationMethod" value="HCD"/>
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1959 <userParam name="ExplainedIonCurrentRatio" value="0.0"/>
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1960 <userParam name="NTermIonCurrentRatio" value="0.0"/>
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1961 <userParam name="CTermIonCurrentRatio" value="0.0"/>
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1962 <userParam name="MS2IonCurrent" value="443.0"/>
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1963 </SpectrumIdentificationItem>
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1964 <SpectrumIdentificationItem chargeState="5" experimentalMassToCharge="598.3059692382812" calculatedMassToCharge="598.3064575195312" peptide_ref="Pep_[-17QQAHIGEKMS+343HLRELQPVK" rank="2" passThreshold="true" id="SII_52_2">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
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1965 <PeptideEvidenceRef peptideEvidence_ref="PepEv_79533_[-17QQAHIGEKMS+343HLRELQPVK_69"/>
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1966 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-22"/>
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1967 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="77"/>
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1968 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="5.293104E-4"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
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1969 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="21.661497"/>
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1970 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
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1971 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
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1972 <userParam name="IsotopeError" value="0"/>
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1973 <userParam name="AssumedDissociationMethod" value="HCD"/>
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1974 <userParam name="ExplainedIonCurrentRatio" value="0.0"/>
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1975 <userParam name="NTermIonCurrentRatio" value="0.0"/>
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1976 <userParam name="CTermIonCurrentRatio" value="0.0"/>
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1977 <userParam name="MS2IonCurrent" value="443.0"/>
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1978 </SpectrumIdentificationItem>
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1979 </SpectrumIdentificationResult>
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1980 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1209 experiment=5" spectraData_ref="SID_1" id="SIR_42">
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1981 <SpectrumIdentificationItem chargeState="6" experimentalMassToCharge="404.19219970703125" calculatedMassToCharge="404.1903381347656" peptide_ref="Pep_EDHELC+343LQRTFVNK" rank="1" passThreshold="true" id="SII_42_1">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
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1982 <PeptideEvidenceRef peptideEvidence_ref="PepEv_69666_EDHELC+343LQRTFVNK_4187"/>
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1983 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-16"/>
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1984 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="58"/>
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1985 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="4.3619383E-4"/>
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1986 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="17.529322"/>
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1987 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
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1988 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
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1989 <userParam name="IsotopeError" value="0"/>
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1990 <userParam name="AssumedDissociationMethod" value="HCD"/>
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1991 <userParam name="ExplainedIonCurrentRatio" value="0.0051282053"/>
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1992 <userParam name="NTermIonCurrentRatio" value="0.0"/>
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1993 <userParam name="CTermIonCurrentRatio" value="0.0051282053"/>
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1994 <userParam name="MS2IonCurrent" value="390.0"/>
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1995 <userParam name="NumMatchedMainIons" value="1"/>
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1996 <userParam name="MeanErrorAll" value="7.1713767"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
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1997 <userParam name="StdevErrorAll" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1998 <userParam name="MeanErrorTop7" value="7.1713767"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
1999 <userParam name="StdevErrorTop7" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2000 <userParam name="MeanRelErrorAll" value="-7.1713767"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2001 <userParam name="StdevRelErrorAll" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
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2002 <userParam name="MeanRelErrorTop7" value="-7.1713767"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
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2003 <userParam name="StdevRelErrorTop7" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2004 </SpectrumIdentificationItem>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2005 <SpectrumIdentificationItem chargeState="5" experimentalMassToCharge="404.19219970703125" calculatedMassToCharge="404.3963623046875" peptide_ref="Pep_[-17QEKNMAINPS+343K" rank="2" passThreshold="true" id="SII_42_2">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2006 <PeptideEvidenceRef peptideEvidence_ref="PepEv_46658_[-17QEKNMAINPS+343K_37"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2007 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-18"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2008 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="39"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2009 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="0.0010095721"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2010 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="40.08708"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2011 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2012 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2013 <userParam name="IsotopeError" value="-1"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2014 <userParam name="AssumedDissociationMethod" value="HCD"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2015 <userParam name="ExplainedIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2016 <userParam name="NTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2017 <userParam name="CTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2018 <userParam name="MS2IonCurrent" value="390.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2019 </SpectrumIdentificationItem>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2020 </SpectrumIdentificationResult>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2021 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1210 experiment=2" spectraData_ref="SID_1" id="SIR_43">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2022 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="597.2890625" calculatedMassToCharge="597.28857421875" peptide_ref="Pep_S+343FPQNPVELK" rank="1" passThreshold="true" id="SII_43_1">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2023 <PeptideEvidenceRef peptideEvidence_ref="PepEv_9921_S+343FPQNPVELK_417"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2024 <PeptideEvidenceRef peptideEvidence_ref="PepEv_17532_S+343FPQNPVELK_417"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2025 <PeptideEvidenceRef peptideEvidence_ref="PepEv_38854_S+343FPQNPVELK_341"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2026 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-15"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2027 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="63"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2028 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="5.844457E-4"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2029 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="23.104893"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2030 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2031 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2032 <userParam name="IsotopeError" value="0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2033 <userParam name="AssumedDissociationMethod" value="HCD"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2034 <userParam name="ExplainedIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2035 <userParam name="NTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2036 <userParam name="CTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2037 <userParam name="MS2IonCurrent" value="1322.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2038 </SpectrumIdentificationItem>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2039 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="597.2890625" calculatedMassToCharge="597.2872314453125" peptide_ref="Pep_TRGPAALS+343EEK" rank="2" passThreshold="true" id="SII_43_2">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2040 <PeptideEvidenceRef peptideEvidence_ref="PepEv_12571_TRGPAALS+343EEK_3067"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2041 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-18"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2042 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="63"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2043 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="0.0010981322"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2044 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="43.603535"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2045 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2046 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2047 <userParam name="IsotopeError" value="0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2048 <userParam name="AssumedDissociationMethod" value="HCD"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2049 <userParam name="ExplainedIonCurrentRatio" value="7.564296E-4"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2050 <userParam name="NTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2051 <userParam name="CTermIonCurrentRatio" value="7.564296E-4"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2052 <userParam name="MS2IonCurrent" value="1322.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2053 <userParam name="NumMatchedMainIons" value="1"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2054 <userParam name="MeanErrorAll" value="10.069623"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2055 <userParam name="StdevErrorAll" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2056 <userParam name="MeanErrorTop7" value="10.069623"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2057 <userParam name="StdevErrorTop7" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2058 <userParam name="MeanRelErrorAll" value="-10.069623"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2059 <userParam name="StdevRelErrorAll" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2060 <userParam name="MeanRelErrorTop7" value="-10.069623"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2061 <userParam name="StdevRelErrorTop7" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2062 </SpectrumIdentificationItem>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2063 </SpectrumIdentificationResult>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2064 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1201 experiment=4" spectraData_ref="SID_1" id="SIR_26">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2065 <SpectrumIdentificationItem chargeState="4" experimentalMassToCharge="792.8330078125" calculatedMassToCharge="792.8295288085938" peptide_ref="Pep_PFMIPFCNDGQIC+343YEECQTK" rank="1" passThreshold="true" id="SII_26_1">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2066 <PeptideEvidenceRef peptideEvidence_ref="PepEv_87518_PFMIPFCNDGQIC+343YEECQTK_451"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2067 <PeptideEvidenceRef peptideEvidence_ref="PepEv_88287_PFMIPFCNDGQIC+343YEECQTK_451"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2068 <PeptideEvidenceRef peptideEvidence_ref="PepEv_89000_PFMIPFCNDGQIC+343YEECQTK_451"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2069 <PeptideEvidenceRef peptideEvidence_ref="PepEv_104090_PFMIPFCNDGQIC+343YEECQTK_451"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2070 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-34"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2076 <userParam name="IsotopeError" value="0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2077 <userParam name="AssumedDissociationMethod" value="HCD"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2079 <userParam name="NTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2080 <userParam name="CTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2081 <userParam name="MS2IonCurrent" value="121.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2082 </SpectrumIdentificationItem>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2085 <PeptideEvidenceRef peptideEvidence_ref="PepEv_88287_PFMIPFC+343NDGQICYEECQTK_451"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2086 <PeptideEvidenceRef peptideEvidence_ref="PepEv_89000_PFMIPFC+343NDGQICYEECQTK_451"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2087 <PeptideEvidenceRef peptideEvidence_ref="PepEv_104090_PFMIPFC+343NDGQICYEECQTK_451"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2094 <userParam name="IsotopeError" value="0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2095 <userParam name="AssumedDissociationMethod" value="HCD"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2098 <userParam name="CTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2099 <userParam name="MS2IonCurrent" value="121.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2100 </SpectrumIdentificationItem>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2101 </SpectrumIdentificationResult>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2103 <SpectrumIdentificationItem chargeState="5" experimentalMassToCharge="481.1990051269531" calculatedMassToCharge="481.2019958496094" peptide_ref="Pep_LHQEVC+343LC+343LQK" rank="1" passThreshold="true" id="SII_41_1">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2104 <PeptideEvidenceRef peptideEvidence_ref="PepEv_72232_LHQEVC+343LC+343LQK_6753"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2105 <PeptideEvidenceRef peptideEvidence_ref="PepEv_77731_LHQEVC+343LC+343LQK_4641"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2106 <PeptideEvidenceRef peptideEvidence_ref="PepEv_99129_LHQEVC+343LC+343LQK_4641"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2113 <userParam name="IsotopeError" value="0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2114 <userParam name="AssumedDissociationMethod" value="HCD"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2116 <userParam name="NTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2117 <userParam name="CTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2118 <userParam name="MS2IonCurrent" value="533.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2119 </SpectrumIdentificationItem>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2121 <PeptideEvidenceRef peptideEvidence_ref="PepEv_10353_QLC+343LC+343VEQHLK_849"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2122 <PeptideEvidenceRef peptideEvidence_ref="PepEv_17964_QLC+343LC+343VEQHLK_849"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2123 <PeptideEvidenceRef peptideEvidence_ref="PepEv_39286_QLC+343LC+343VEQHLK_773"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2126 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="9.1667793E-4"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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2128 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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2129 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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2130 <userParam name="IsotopeError" value="0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2131 <userParam name="AssumedDissociationMethod" value="HCD"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2132 <userParam name="ExplainedIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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2133 <userParam name="NTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2134 <userParam name="CTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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2135 <userParam name="MS2IonCurrent" value="533.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
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2136 </SpectrumIdentificationItem>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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2137 </SpectrumIdentificationResult>
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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2138 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1210 experiment=3" spectraData_ref="SID_1" id="SIR_44">
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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2139 <SpectrumIdentificationItem chargeState="4" experimentalMassToCharge="461.7162170410156" calculatedMassToCharge="461.9718322753906" peptide_ref="Pep_NEM+16AM+16CGSNVRQK" rank="1" passThreshold="true" id="SII_44_1">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2140 <PeptideEvidenceRef peptideEvidence_ref="PepEv_67926_NEM+16AM+16CGSNVRQK_2447"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2141 <PeptideEvidenceRef peptideEvidence_ref="PepEv_75467_NEM+16AM+16CGSNVRQK_2377"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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2142 <PeptideEvidenceRef peptideEvidence_ref="PepEv_96865_NEM+16AM+16CGSNVRQK_2377"/>
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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2162 <userParam name="MeanRelErrorTop7" value="16.15865"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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2163 <userParam name="StdevRelErrorTop7" value="0.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2164 </SpectrumIdentificationItem>
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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2176 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2179 <userParam name="CTermIonCurrentRatio" value="0.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2181 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2182 </SpectrumIdentificationResult>
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2185 <PeptideEvidenceRef peptideEvidence_ref="PepEv_31227_GRTRTAIRNGQVWEES+343LK_135"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2186 <PeptideEvidenceRef peptideEvidence_ref="PepEv_31940_GRTRTAIRNGQVWEES+343LK_79"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2187 <PeptideEvidenceRef peptideEvidence_ref="PepEv_47743_GRTRTAIRNGQVWEES+343LK_79"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2192 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2193 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2194 <userParam name="IsotopeError" value="0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2195 <userParam name="AssumedDissociationMethod" value="HCD"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2197 <userParam name="NTermIonCurrentRatio" value="0.0031120332"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2198 <userParam name="CTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2199 <userParam name="MS2IonCurrent" value="964.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2200 <userParam name="NumMatchedMainIons" value="1"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2201 <userParam name="MeanErrorAll" value="9.420783"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2202 <userParam name="StdevErrorAll" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2203 <userParam name="MeanErrorTop7" value="9.420783"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2204 <userParam name="StdevErrorTop7" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2205 <userParam name="MeanRelErrorAll" value="-9.420783"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2206 <userParam name="StdevRelErrorAll" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2207 <userParam name="MeanRelErrorTop7" value="-9.420783"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2208 <userParam name="StdevRelErrorTop7" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2209 </SpectrumIdentificationItem>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2210 <SpectrumIdentificationItem chargeState="4" experimentalMassToCharge="547.2749633789062" calculatedMassToCharge="547.2743530273438" peptide_ref="Pep_LPQGYHPNDVEEEWGK" rank="2" passThreshold="true" id="SII_55_2">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2211 <PeptideEvidenceRef peptideEvidence_ref="PepEv_9972_LPQGYHPNDVEEEWGK_468"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2212 <PeptideEvidenceRef peptideEvidence_ref="PepEv_17583_LPQGYHPNDVEEEWGK_468"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2213 <PeptideEvidenceRef peptideEvidence_ref="PepEv_38905_LPQGYHPNDVEEEWGK_392"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2219 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2220 <userParam name="IsotopeError" value="0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2221 <userParam name="AssumedDissociationMethod" value="HCD"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2222 <userParam name="ExplainedIonCurrentRatio" value="0.0031120332"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2223 <userParam name="NTermIonCurrentRatio" value="0.0031120332"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2224 <userParam name="CTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2225 <userParam name="MS2IonCurrent" value="964.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2226 <userParam name="NumMatchedMainIons" value="1"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2227 <userParam name="MeanErrorAll" value="19.94787"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2228 <userParam name="StdevErrorAll" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2229 <userParam name="MeanErrorTop7" value="19.94787"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2230 <userParam name="StdevErrorTop7" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2231 <userParam name="MeanRelErrorAll" value="-19.94787"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2232 <userParam name="StdevRelErrorAll" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2233 <userParam name="MeanRelErrorTop7" value="-19.94787"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2234 <userParam name="StdevRelErrorTop7" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2235 </SpectrumIdentificationItem>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2236 </SpectrumIdentificationResult>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2237 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1229 experiment=2" spectraData_ref="SID_1" id="SIR_90">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2238 <SpectrumIdentificationItem chargeState="5" experimentalMassToCharge="522.6893920898438" calculatedMassToCharge="522.8875732421875" peptide_ref="Pep_RFQAFM+16NNKRSTDKM+16K" rank="1" passThreshold="true" id="SII_90_1">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2239 <PeptideEvidenceRef peptideEvidence_ref="PepEv_84474_RFQAFM+16NNKRSTDKM+16K_27"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2240 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-20"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2241 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="73"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2242 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="0.0010280317"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2243 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="41.618835"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2244 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2245 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2246 <userParam name="IsotopeError" value="-1"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2247 <userParam name="AssumedDissociationMethod" value="HCD"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2248 <userParam name="ExplainedIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2249 <userParam name="NTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2250 <userParam name="CTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2251 <userParam name="MS2IonCurrent" value="817.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2252 </SpectrumIdentificationItem>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2253 <SpectrumIdentificationItem chargeState="5" experimentalMassToCharge="522.6893920898438" calculatedMassToCharge="522.8875732421875" peptide_ref="Pep_M+16KDTSRKNNM+16FAQFRK" rank="2" passThreshold="true" id="SII_90_2">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2254 <PeptideEvidenceRef peptideEvidence_ref="PepEv_29243_M+16KDTSRKNNM+16FAQFRK_771"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2255 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-21"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2256 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="73"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2257 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="0.0012420963"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2258 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="50.285023"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2259 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2260 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2261 <userParam name="IsotopeError" value="-1"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2262 <userParam name="AssumedDissociationMethod" value="HCD"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2263 <userParam name="ExplainedIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2264 <userParam name="NTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2265 <userParam name="CTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2266 <userParam name="MS2IonCurrent" value="817.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2267 </SpectrumIdentificationItem>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2268 </SpectrumIdentificationResult>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2269 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1218 experiment=3" spectraData_ref="SID_1" id="SIR_74">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2270 <SpectrumIdentificationItem chargeState="5" experimentalMassToCharge="471.2165222167969" calculatedMassToCharge="471.414794921875" peptide_ref="Pep_FLGRIGGNGEES+343ENDK" rank="1" passThreshold="true" id="SII_74_1">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2271 <PeptideEvidenceRef peptideEvidence_ref="PepEv_104591_FLGRIGGNGEES+343ENDK_239"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2272 <PeptideEvidenceRef peptideEvidence_ref="PepEv_107465_FLGRIGGNGEES+343ENDK_239"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2273 <PeptideEvidenceRef peptideEvidence_ref="PepEv_108597_FLGRIGGNGEES+343ENDK_239"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2274 <PeptideEvidenceRef peptideEvidence_ref="PepEv_109697_FLGRIGGNGEES+343ENDK_239"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2275 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-26"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2276 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="71"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2277 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="0.0014468122"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2278 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="58.572746"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2279 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2280 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2281 <userParam name="IsotopeError" value="-1"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2282 <userParam name="AssumedDissociationMethod" value="HCD"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2283 <userParam name="ExplainedIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2284 <userParam name="NTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2285 <userParam name="CTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2286 <userParam name="MS2IonCurrent" value="504.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2287 </SpectrumIdentificationItem>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2288 <SpectrumIdentificationItem chargeState="5" experimentalMassToCharge="471.2165222167969" calculatedMassToCharge="471.414794921875" peptide_ref="Pep_DNES+343EEGNGGIRGLFK" rank="2" passThreshold="true" id="SII_74_2">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2289 <PeptideEvidenceRef peptideEvidence_ref="PepEv_49224_DNES+343EEGNGGIRGLFK_847"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2290 <PeptideEvidenceRef peptideEvidence_ref="PepEv_52130_DNES+343EEGNGGIRGLFK_879"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2291 <PeptideEvidenceRef peptideEvidence_ref="PepEv_53230_DNES+343EEGNGGIRGLFK_847"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2292 <PeptideEvidenceRef peptideEvidence_ref="PepEv_54330_DNES+343EEGNGGIRGLFK_847"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2305 </SpectrumIdentificationItem>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2306 </SpectrumIdentificationResult>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2317 <userParam name="IsotopeError" value="0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2318 <userParam name="AssumedDissociationMethod" value="HCD"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2320 <userParam name="NTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2321 <userParam name="CTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2322 <userParam name="MS2IonCurrent" value="441.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2323 </SpectrumIdentificationItem>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2324 <SpectrumIdentificationItem chargeState="5" experimentalMassToCharge="487.24053955078125" calculatedMassToCharge="487.2373962402344" peptide_ref="Pep_C+343YARLHPRAVNCRK" rank="2" passThreshold="true" id="SII_107_2">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2326 <PeptideEvidenceRef peptideEvidence_ref="PepEv_46438_C+343YARLHPRAVNCRK_99"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2332 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2333 <userParam name="IsotopeError" value="0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2334 <userParam name="AssumedDissociationMethod" value="HCD"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2335 <userParam name="ExplainedIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2336 <userParam name="NTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2337 <userParam name="CTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2338 <userParam name="MS2IonCurrent" value="441.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2339 </SpectrumIdentificationItem>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2340 </SpectrumIdentificationResult>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2341 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1215 experiment=2" spectraData_ref="SID_1" id="SIR_62">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2342 <SpectrumIdentificationItem chargeState="4" experimentalMassToCharge="605.810546875" calculatedMassToCharge="605.8121948242188" peptide_ref="Pep_M+16S+343HLRELQPVKYK" rank="1" passThreshold="true" id="SII_62_1">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2343 <PeptideEvidenceRef peptideEvidence_ref="PepEv_79541_M+16S+343HLRELQPVKYK_77"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2345 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="86"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2346 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="0.0014706878"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2348 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2349 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2350 <userParam name="IsotopeError" value="0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2351 <userParam name="AssumedDissociationMethod" value="HCD"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2352 <userParam name="ExplainedIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2353 <userParam name="NTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2354 <userParam name="CTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2355 <userParam name="MS2IonCurrent" value="486.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2356 </SpectrumIdentificationItem>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2357 <SpectrumIdentificationItem chargeState="4" experimentalMassToCharge="605.810546875" calculatedMassToCharge="606.0590209960938" peptide_ref="Pep_ERMTEIKPLLC+343AGK" rank="2" passThreshold="true" id="SII_62_2">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2358 <PeptideEvidenceRef peptideEvidence_ref="PepEv_100309_ERMTEIKPLLC+343AGK_398"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2363 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2364 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2365 <userParam name="IsotopeError" value="-1"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2366 <userParam name="AssumedDissociationMethod" value="HCD"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2367 <userParam name="ExplainedIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2368 <userParam name="NTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2369 <userParam name="CTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2370 <userParam name="MS2IonCurrent" value="486.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2371 </SpectrumIdentificationItem>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2372 </SpectrumIdentificationResult>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2373 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1196 experiment=2" spectraData_ref="SID_1" id="SIR_15">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2374 <SpectrumIdentificationItem chargeState="5" experimentalMassToCharge="409.1874694824219" calculatedMassToCharge="409.19036865234375" peptide_ref="Pep_[-17QLCLC+343VEQHLK" rank="1" passThreshold="true" id="SII_15_1">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2375 <PeptideEvidenceRef peptideEvidence_ref="PepEv_10353_[-17QLCLC+343VEQHLK_849"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2376 <PeptideEvidenceRef peptideEvidence_ref="PepEv_17964_[-17QLCLC+343VEQHLK_849"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2377 <PeptideEvidenceRef peptideEvidence_ref="PepEv_39286_[-17QLCLC+343VEQHLK_773"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2378 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-22"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2379 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="56"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2380 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="0.0015165305"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2381 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="60.216877"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2382 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2383 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2384 <userParam name="IsotopeError" value="0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2385 <userParam name="AssumedDissociationMethod" value="HCD"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2386 <userParam name="ExplainedIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2387 <userParam name="NTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2388 <userParam name="CTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2389 <userParam name="MS2IonCurrent" value="465.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2390 </SpectrumIdentificationItem>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2391 <SpectrumIdentificationItem chargeState="5" experimentalMassToCharge="409.1874694824219" calculatedMassToCharge="409.19036865234375" peptide_ref="Pep_[-17QLC+343LCVEQHLK" rank="2" passThreshold="true" id="SII_15_2">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2392 <PeptideEvidenceRef peptideEvidence_ref="PepEv_10353_[-17QLC+343LCVEQHLK_849"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2393 <PeptideEvidenceRef peptideEvidence_ref="PepEv_17964_[-17QLC+343LCVEQHLK_849"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2394 <PeptideEvidenceRef peptideEvidence_ref="PepEv_39286_[-17QLC+343LCVEQHLK_773"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2395 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-23"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2396 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="56"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2397 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="0.0018105983"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2398 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="71.893425"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2399 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2400 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2401 <userParam name="IsotopeError" value="0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2402 <userParam name="AssumedDissociationMethod" value="HCD"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2403 <userParam name="ExplainedIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2404 <userParam name="NTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2405 <userParam name="CTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2406 <userParam name="MS2IonCurrent" value="465.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2407 </SpectrumIdentificationItem>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2408 </SpectrumIdentificationResult>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2409 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1213 experiment=5" spectraData_ref="SID_1" id="SIR_57">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2410 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="575.3018188476562" calculatedMassToCharge="575.3076171875" peptide_ref="Pep_ECCDKPLLEK" rank="1" passThreshold="true" id="SII_57_1">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2411 <PeptideEvidenceRef peptideEvidence_ref="PepEv_44236_ECCDKPLLEK_300"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2412 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-22"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2413 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="59"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2414 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="0.0015540735"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2415 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="61.437187"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2416 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2417 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2418 <userParam name="IsotopeError" value="0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2419 <userParam name="AssumedDissociationMethod" value="HCD"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2420 <userParam name="ExplainedIonCurrentRatio" value="0.0014619883"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2421 <userParam name="NTermIonCurrentRatio" value="0.0014619883"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2422 <userParam name="CTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2423 <userParam name="MS2IonCurrent" value="684.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2424 <userParam name="NumMatchedMainIons" value="1"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2425 <userParam name="MeanErrorAll" value="12.832601"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2426 <userParam name="StdevErrorAll" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2427 <userParam name="MeanErrorTop7" value="12.832601"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2428 <userParam name="StdevErrorTop7" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2429 <userParam name="MeanRelErrorAll" value="12.832601"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2430 <userParam name="StdevRelErrorAll" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2431 <userParam name="MeanRelErrorTop7" value="12.832601"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2432 <userParam name="StdevRelErrorTop7" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2433 </SpectrumIdentificationItem>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2434 <SpectrumIdentificationItem chargeState="5" experimentalMassToCharge="575.3018188476562" calculatedMassToCharge="575.5001220703125" peptide_ref="Pep_LKETSSFRMRHLQS+343LHK" rank="2" passThreshold="true" id="SII_57_2">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2435 <PeptideEvidenceRef peptideEvidence_ref="PepEv_10248_LKETSSFRMRHLQS+343LHK_744"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2436 <PeptideEvidenceRef peptideEvidence_ref="PepEv_17859_LKETSSFRMRHLQS+343LHK_744"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2437 <PeptideEvidenceRef peptideEvidence_ref="PepEv_39181_LKETSSFRMRHLQS+343LHK_668"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2438 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-25"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2453 <userParam name="MeanErrorTop7" value="11.25018"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2454 <userParam name="StdevErrorTop7" value="5.709004"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2457 <userParam name="MeanRelErrorTop7" value="5.7090044"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2458 <userParam name="StdevRelErrorTop7" value="11.25018"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2460 </SpectrumIdentificationResult>
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2461 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1191 experiment=2" spectraData_ref="SID_1" id="SIR_8">
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2463 <PeptideEvidenceRef peptideEvidence_ref="PepEv_79379_[-17QESSSISEAEM+16QK_122"/>
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2470 <userParam name="IsotopeError" value="-1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2471 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2474 <userParam name="CTermIonCurrentRatio" value="0.012376238"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2475 <userParam name="MS2IonCurrent" value="404.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2476 <userParam name="NumMatchedMainIons" value="2"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2477 <userParam name="MeanErrorAll" value="19.003765"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2478 <userParam name="StdevErrorAll" value="0.682242"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2479 <userParam name="MeanErrorTop7" value="19.003765"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2480 <userParam name="StdevErrorTop7" value="0.682242"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2481 <userParam name="MeanRelErrorAll" value="-19.003765"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2482 <userParam name="StdevRelErrorAll" value="0.682242"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2483 <userParam name="MeanRelErrorTop7" value="-19.003765"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2484 <userParam name="StdevRelErrorTop7" value="0.682242"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2485 </SpectrumIdentificationItem>
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2487 <PeptideEvidenceRef peptideEvidence_ref="PepEv_23356_[-17QM+16EAESISSSEQK_74"/>
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2492 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2493 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2494 <userParam name="IsotopeError" value="-1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2495 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2496 <userParam name="ExplainedIonCurrentRatio" value="0.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2497 <userParam name="NTermIonCurrentRatio" value="0.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2498 <userParam name="CTermIonCurrentRatio" value="0.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2499 <userParam name="MS2IonCurrent" value="404.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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2500 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2501 </SpectrumIdentificationResult>
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2502 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1211 experiment=2" spectraData_ref="SID_1" id="SIR_46">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2503 <SpectrumIdentificationItem chargeState="6" experimentalMassToCharge="442.1819763183594" calculatedMassToCharge="442.1789855957031" peptide_ref="Pep_QEPERNEC+343FLS+343HK" rank="1" passThreshold="true" id="SII_46_1">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2504 <PeptideEvidenceRef peptideEvidence_ref="PepEv_44054_QEPERNEC+343FLS+343HK_118"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2505 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-28"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2506 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="58"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2507 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="0.002249939"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2509 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2510 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2511 <userParam name="IsotopeError" value="0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2512 <userParam name="AssumedDissociationMethod" value="HCD"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2513 <userParam name="ExplainedIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2514 <userParam name="NTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2515 <userParam name="CTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2516 <userParam name="MS2IonCurrent" value="558.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2517 </SpectrumIdentificationItem>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2518 <SpectrumIdentificationItem chargeState="6" experimentalMassToCharge="442.1819763183594" calculatedMassToCharge="442.1789855957031" peptide_ref="Pep_HS+343LFC+343ENREPEQK" rank="2" passThreshold="true" id="SII_46_2">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2519 <PeptideEvidenceRef peptideEvidence_ref="PepEv_100390_HS+343LFC+343ENREPEQK_479"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2521 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="58"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2524 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2525 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2526 <userParam name="IsotopeError" value="0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2527 <userParam name="AssumedDissociationMethod" value="HCD"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2528 <userParam name="ExplainedIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2529 <userParam name="NTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2530 <userParam name="CTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2531 <userParam name="MS2IonCurrent" value="558.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2532 </SpectrumIdentificationItem>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2533 </SpectrumIdentificationResult>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2534 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1216 experiment=2" spectraData_ref="SID_1" id="SIR_65">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2535 <SpectrumIdentificationItem chargeState="6" experimentalMassToCharge="464.21527099609375" calculatedMassToCharge="464.3798522949219" peptide_ref="Pep_LDS+343MS+343VDKIEERLK" rank="1" passThreshold="true" id="SII_65_1">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2536 <PeptideEvidenceRef peptideEvidence_ref="PepEv_84245_LDS+343MS+343VDKIEERLK_614"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2537 <PeptideEvidenceRef peptideEvidence_ref="PepEv_85057_LDS+343MS+343VDKIEERLK_610"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2538 <PeptideEvidenceRef peptideEvidence_ref="PepEv_85824_LDS+343MS+343VDKIEERLK_565"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2539 <PeptideEvidenceRef peptideEvidence_ref="PepEv_93910_LDS+343MS+343VDKIEERLK_425"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2540 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-25"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2541 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="71"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2542 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="0.0023129396"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2543 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="92.9501"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2544 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2545 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2546 <userParam name="IsotopeError" value="-1"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2547 <userParam name="AssumedDissociationMethod" value="HCD"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2548 <userParam name="ExplainedIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2549 <userParam name="NTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2550 <userParam name="CTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2551 <userParam name="MS2IonCurrent" value="905.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2552 </SpectrumIdentificationItem>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2553 <SpectrumIdentificationItem chargeState="6" experimentalMassToCharge="464.21527099609375" calculatedMassToCharge="464.3798522949219" peptide_ref="Pep_LREEIKDVS+343MS+343DLK" rank="2" passThreshold="true" id="SII_65_2">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2554 <PeptideEvidenceRef peptideEvidence_ref="PepEv_27846_LREEIKDVS+343MS+343DLK_190"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2555 <PeptideEvidenceRef peptideEvidence_ref="PepEv_28662_LREEIKDVS+343MS+343DLK_190"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2556 <PeptideEvidenceRef peptideEvidence_ref="PepEv_29474_LREEIKDVS+343MS+343DLK_190"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2557 <PeptideEvidenceRef peptideEvidence_ref="PepEv_37700_LREEIKDVS+343MS+343DLK_190"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2558 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-29"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2559 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="71"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2560 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="0.0046383836"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2561 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="186.40273"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2562 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2563 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2564 <userParam name="IsotopeError" value="-1"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2565 <userParam name="AssumedDissociationMethod" value="HCD"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2566 <userParam name="ExplainedIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2567 <userParam name="NTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2568 <userParam name="CTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2569 <userParam name="MS2IonCurrent" value="905.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2570 </SpectrumIdentificationItem>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2571 </SpectrumIdentificationResult>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2572 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1218 experiment=2" spectraData_ref="SID_1" id="SIR_73">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2573 <SpectrumIdentificationItem chargeState="4" experimentalMassToCharge="577.770751953125" calculatedMassToCharge="578.0166625976562" peptide_ref="Pep_VASLRETYGDM+16ADCCEK" rank="1" passThreshold="true" id="SII_73_1">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2574 <PeptideEvidenceRef peptideEvidence_ref="PepEv_44037_VASLRETYGDM+16ADCCEK_101"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2575 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-24"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2576 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="78"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2577 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="0.002549831"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2578 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="103.60474"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2579 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2580 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2581 <userParam name="IsotopeError" value="-1"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2582 <userParam name="AssumedDissociationMethod" value="HCD"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2583 <userParam name="ExplainedIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2584 <userParam name="NTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2585 <userParam name="CTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2586 <userParam name="MS2IonCurrent" value="939.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2587 </SpectrumIdentificationItem>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2597 <userParam name="AssumedDissociationMethod" value="HCD"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2603 </SpectrumIdentificationResult>
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2604 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1209 experiment=2" spectraData_ref="SID_1" id="SIR_39">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2605 <SpectrumIdentificationItem chargeState="6" experimentalMassToCharge="452.254638671875" calculatedMassToCharge="452.25213623046875" peptide_ref="Pep_LQKVAHDLMEIEGEPAPDRK" rank="1" passThreshold="true" id="SII_39_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2606 <PeptideEvidenceRef peptideEvidence_ref="PepEv_13608_LQKVAHDLMEIEGEPAPDRK_4104"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2607 <PeptideEvidenceRef peptideEvidence_ref="PepEv_19177_LQKVAHDLMEIEGEPAPDRK_2062"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2608 <PeptideEvidenceRef peptideEvidence_ref="PepEv_40499_LQKVAHDLMEIEGEPAPDRK_1986"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2615 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2616 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2617 <userParam name="ExplainedIonCurrentRatio" value="0.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2618 <userParam name="NTermIonCurrentRatio" value="0.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2619 <userParam name="CTermIonCurrentRatio" value="0.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2620 <userParam name="MS2IonCurrent" value="1024.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2621 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2622 <SpectrumIdentificationItem chargeState="6" experimentalMassToCharge="452.254638671875" calculatedMassToCharge="452.25213623046875" peptide_ref="Pep_RDPAPEGEIEMLDHAVKQLK" rank="2" passThreshold="true" id="SII_39_2">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2623 <PeptideEvidenceRef peptideEvidence_ref="PepEv_68968_RDPAPEGEIEMLDHAVKQLK_3489"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2624 <PeptideEvidenceRef peptideEvidence_ref="PepEv_76509_RDPAPEGEIEMLDHAVKQLK_3419"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2625 <PeptideEvidenceRef peptideEvidence_ref="PepEv_97907_RDPAPEGEIEMLDHAVKQLK_3419"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2630 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2631 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2632 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2633 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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2634 <userParam name="ExplainedIonCurrentRatio" value="0.001953125"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2635 <userParam name="NTermIonCurrentRatio" value="0.001953125"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2636 <userParam name="CTermIonCurrentRatio" value="0.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2637 <userParam name="MS2IonCurrent" value="1024.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2638 <userParam name="NumMatchedMainIons" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2639 <userParam name="MeanErrorAll" value="4.5456934"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2640 <userParam name="StdevErrorAll" value="0.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2641 <userParam name="MeanErrorTop7" value="4.5456934"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2642 <userParam name="StdevErrorTop7" value="0.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2643 <userParam name="MeanRelErrorAll" value="4.5456934"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2644 <userParam name="StdevRelErrorAll" value="0.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2645 <userParam name="MeanRelErrorTop7" value="4.5456934"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2646 <userParam name="StdevRelErrorTop7" value="0.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2647 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2648 </SpectrumIdentificationResult>
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2649 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1231 experiment=2" spectraData_ref="SID_1" id="SIR_96">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2650 <SpectrumIdentificationItem chargeState="6" experimentalMassToCharge="490.2488098144531" calculatedMassToCharge="490.4136657714844" peptide_ref="Pep_RFQAFMNNKRS+343TDKM+16K" rank="1" passThreshold="true" id="SII_96_1">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2651 <PeptideEvidenceRef peptideEvidence_ref="PepEv_84474_RFQAFMNNKRS+343TDKM+16K_27"/>
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2657 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2658 <userParam name="IsotopeError" value="-1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2659 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2660 <userParam name="ExplainedIonCurrentRatio" value="0.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2661 <userParam name="NTermIonCurrentRatio" value="0.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2662 <userParam name="CTermIonCurrentRatio" value="0.0"/>
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2663 <userParam name="MS2IonCurrent" value="611.0"/>
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2664 </SpectrumIdentificationItem>
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2665 <SpectrumIdentificationItem chargeState="4" experimentalMassToCharge="490.2488098144531" calculatedMassToCharge="490.2491760253906" peptide_ref="Pep_SM+16ENEDKEETVAK" rank="2" passThreshold="true" id="SII_96_2">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2666 <PeptideEvidenceRef peptideEvidence_ref="PepEv_10617_SM+16ENEDKEETVAK_1113"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2667 <PeptideEvidenceRef peptideEvidence_ref="PepEv_18226_SM+16ENEDKEETVAK_1111"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2668 <PeptideEvidenceRef peptideEvidence_ref="PepEv_39548_SM+16ENEDKEETVAK_1035"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2669 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-26"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2670 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="72"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2671 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="0.0040624393"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2672 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="162.6235"/>
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2673 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2674 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2675 <userParam name="IsotopeError" value="0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2676 <userParam name="AssumedDissociationMethod" value="HCD"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2677 <userParam name="ExplainedIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2678 <userParam name="NTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2679 <userParam name="CTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2680 <userParam name="MS2IonCurrent" value="611.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2681 </SpectrumIdentificationItem>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2682 </SpectrumIdentificationResult>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2683 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1181 experiment=2" spectraData_ref="SID_1" id="SIR_1">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2684 <SpectrumIdentificationItem chargeState="6" experimentalMassToCharge="506.7447204589844" calculatedMassToCharge="506.7470397949219" peptide_ref="Pep_SRGVLSAVSS+343KS+343QILQEK" rank="1" passThreshold="true" id="SII_1_1">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2685 <PeptideEvidenceRef peptideEvidence_ref="PepEv_72160_SRGVLSAVSS+343KS+343QILQEK_6681"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2686 <PeptideEvidenceRef peptideEvidence_ref="PepEv_77661_SRGVLSAVSS+343KS+343QILQEK_4571"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2687 <PeptideEvidenceRef peptideEvidence_ref="PepEv_99059_SRGVLSAVSS+343KS+343QILQEK_4571"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2688 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-40"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2689 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="47"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2690 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="0.0035317831"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2691 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="144.01906"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2692 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2693 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2694 <userParam name="IsotopeError" value="0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2695 <userParam name="AssumedDissociationMethod" value="HCD"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2696 <userParam name="ExplainedIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2697 <userParam name="NTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2698 <userParam name="CTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2699 <userParam name="MS2IonCurrent" value="159.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2700 </SpectrumIdentificationItem>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2701 <SpectrumIdentificationItem chargeState="6" experimentalMassToCharge="506.7447204589844" calculatedMassToCharge="506.7470397949219" peptide_ref="Pep_SRGVLS+343AVSS+343KSQILQEK" rank="2" passThreshold="true" id="SII_1_2">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2702 <PeptideEvidenceRef peptideEvidence_ref="PepEv_72160_SRGVLS+343AVSS+343KSQILQEK_6681"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2703 <PeptideEvidenceRef peptideEvidence_ref="PepEv_77661_SRGVLS+343AVSS+343KSQILQEK_4571"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2704 <PeptideEvidenceRef peptideEvidence_ref="PepEv_99059_SRGVLS+343AVSS+343KSQILQEK_4571"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2705 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-40"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2706 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="47"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2707 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="0.0035317831"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2708 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="144.01906"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2709 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2710 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2711 <userParam name="IsotopeError" value="0"/>
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2712 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2713 <userParam name="ExplainedIonCurrentRatio" value="0.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2714 <userParam name="NTermIonCurrentRatio" value="0.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2715 <userParam name="CTermIonCurrentRatio" value="0.0"/>
8
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2716 <userParam name="MS2IonCurrent" value="159.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2717 </SpectrumIdentificationItem>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2718 <SpectrumIdentificationItem chargeState="6" experimentalMassToCharge="506.7447204589844" calculatedMassToCharge="506.7470397949219" peptide_ref="Pep_SRGVLS+343AVS+343SKSQILQEK" rank="3" passThreshold="true" id="SII_1_3">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2719 <PeptideEvidenceRef peptideEvidence_ref="PepEv_72160_SRGVLS+343AVS+343SKSQILQEK_6681"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2720 <PeptideEvidenceRef peptideEvidence_ref="PepEv_77661_SRGVLS+343AVS+343SKSQILQEK_4571"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2721 <PeptideEvidenceRef peptideEvidence_ref="PepEv_99059_SRGVLS+343AVS+343SKSQILQEK_4571"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2722 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-40"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2723 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="47"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2724 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="0.0035317831"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2725 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="144.01906"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2726 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2727 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2728 <userParam name="IsotopeError" value="0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2729 <userParam name="AssumedDissociationMethod" value="HCD"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2730 <userParam name="ExplainedIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2731 <userParam name="NTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2732 <userParam name="CTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2733 <userParam name="MS2IonCurrent" value="159.0"/>
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2734 </SpectrumIdentificationItem>
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2735 <SpectrumIdentificationItem chargeState="6" experimentalMassToCharge="506.7447204589844" calculatedMassToCharge="506.7470397949219" peptide_ref="Pep_SRGVLSAVS+343SKS+343QILQEK" rank="4" passThreshold="true" id="SII_1_4">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2736 <PeptideEvidenceRef peptideEvidence_ref="PepEv_72160_SRGVLSAVS+343SKS+343QILQEK_6681"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2737 <PeptideEvidenceRef peptideEvidence_ref="PepEv_77661_SRGVLSAVS+343SKS+343QILQEK_4571"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2738 <PeptideEvidenceRef peptideEvidence_ref="PepEv_99059_SRGVLSAVS+343SKS+343QILQEK_4571"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2739 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-40"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2740 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="47"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2741 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="0.0035317831"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2742 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="144.01906"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2743 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2744 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2745 <userParam name="IsotopeError" value="0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2746 <userParam name="AssumedDissociationMethod" value="HCD"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2747 <userParam name="ExplainedIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2748 <userParam name="NTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2749 <userParam name="CTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2750 <userParam name="MS2IonCurrent" value="159.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2751 </SpectrumIdentificationItem>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2752 <SpectrumIdentificationItem chargeState="6" experimentalMassToCharge="506.7447204589844" calculatedMassToCharge="506.7470397949219" peptide_ref="Pep_SRGVLS+343AVSSKS+343QILQEK" rank="5" passThreshold="true" id="SII_1_5">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2753 <PeptideEvidenceRef peptideEvidence_ref="PepEv_72160_SRGVLS+343AVSSKS+343QILQEK_6681"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2754 <PeptideEvidenceRef peptideEvidence_ref="PepEv_77661_SRGVLS+343AVSSKS+343QILQEK_4571"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2755 <PeptideEvidenceRef peptideEvidence_ref="PepEv_99059_SRGVLS+343AVSSKS+343QILQEK_4571"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2756 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-40"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2757 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="47"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2758 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="0.0035317831"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2759 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="144.01906"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2760 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2761 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2762 <userParam name="IsotopeError" value="0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2763 <userParam name="AssumedDissociationMethod" value="HCD"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2764 <userParam name="ExplainedIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2765 <userParam name="NTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2766 <userParam name="CTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2767 <userParam name="MS2IonCurrent" value="159.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2768 </SpectrumIdentificationItem>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2769 <SpectrumIdentificationItem chargeState="6" experimentalMassToCharge="506.7447204589844" calculatedMassToCharge="506.7470397949219" peptide_ref="Pep_SRGVLSAVS+343S+343KSQILQEK" rank="6" passThreshold="true" id="SII_1_6">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2770 <PeptideEvidenceRef peptideEvidence_ref="PepEv_72160_SRGVLSAVS+343S+343KSQILQEK_6681"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2771 <PeptideEvidenceRef peptideEvidence_ref="PepEv_77661_SRGVLSAVS+343S+343KSQILQEK_4571"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2772 <PeptideEvidenceRef peptideEvidence_ref="PepEv_99059_SRGVLSAVS+343S+343KSQILQEK_4571"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2773 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-40"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2774 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="47"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2775 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="0.0035317831"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2776 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="144.01906"/>
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2777 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2778 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2779 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2780 <userParam name="AssumedDissociationMethod" value="HCD"/>
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2781 <userParam name="ExplainedIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2782 <userParam name="NTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2783 <userParam name="CTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2784 <userParam name="MS2IonCurrent" value="159.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2785 </SpectrumIdentificationItem>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2786 </SpectrumIdentificationResult>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2787 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1203 experiment=3" spectraData_ref="SID_1" id="SIR_30">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2788 <SpectrumIdentificationItem chargeState="5" experimentalMassToCharge="520.2384033203125" calculatedMassToCharge="520.2421264648438" peptide_ref="Pep_KS+343IDEM+16NNAWENLNK" rank="1" passThreshold="true" id="SII_30_1">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2789 <PeptideEvidenceRef peptideEvidence_ref="PepEv_15741_KS+343IDEM+16NNAWENLNK_6237"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2790 <PeptideEvidenceRef peptideEvidence_ref="PepEv_21310_KS+343IDEM+16NNAWENLNK_4195"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2791 <PeptideEvidenceRef peptideEvidence_ref="PepEv_42632_KS+343IDEM+16NNAWENLNK_4119"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2792 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-24"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2793 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="71"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2794 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="0.004421605"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2795 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="178.35426"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2796 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2797 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2798 <userParam name="IsotopeError" value="0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2799 <userParam name="AssumedDissociationMethod" value="HCD"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2800 <userParam name="ExplainedIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2801 <userParam name="NTermIonCurrentRatio" value="0.0"/>
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
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2802 <userParam name="CTermIonCurrentRatio" value="0.0"/>
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2804 </SpectrumIdentificationItem>
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2805 <SpectrumIdentificationItem chargeState="5" experimentalMassToCharge="520.2384033203125" calculatedMassToCharge="520.2421264648438" peptide_ref="Pep_NLNEWANNM+16EDIS+343KK" rank="2" passThreshold="true" id="SII_30_2">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2806 <PeptideEvidenceRef peptideEvidence_ref="PepEv_66840_NLNEWANNM+16EDIS+343KK_1361"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2807 <PeptideEvidenceRef peptideEvidence_ref="PepEv_74381_NLNEWANNM+16EDIS+343KK_1291"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2808 <PeptideEvidenceRef peptideEvidence_ref="PepEv_95779_NLNEWANNM+16EDIS+343KK_1291"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2815 <userParam name="IsotopeError" value="0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2816 <userParam name="AssumedDissociationMethod" value="HCD"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2818 <userParam name="NTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2819 <userParam name="CTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2820 <userParam name="MS2IonCurrent" value="495.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2821 </SpectrumIdentificationItem>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2822 </SpectrumIdentificationResult>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2823 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1228 experiment=3" spectraData_ref="SID_1" id="SIR_89">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2824 <SpectrumIdentificationItem chargeState="5" experimentalMassToCharge="606.2748413085938" calculatedMassToCharge="606.2780151367188" peptide_ref="Pep_VKES+343LDQLLEQYQTS+343K" rank="1" passThreshold="true" id="SII_89_1">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2825 <PeptideEvidenceRef peptideEvidence_ref="PepEv_68343_VKES+343LDQLLEQYQTS+343K_2864"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2826 <PeptideEvidenceRef peptideEvidence_ref="PepEv_75884_VKES+343LDQLLEQYQTS+343K_2794"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2827 <PeptideEvidenceRef peptideEvidence_ref="PepEv_97282_VKES+343LDQLLEQYQTS+343K_2794"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2832 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2833 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2834 <userParam name="IsotopeError" value="0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
2835 <userParam name="AssumedDissociationMethod" value="HCD"/>
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2836 <userParam name="ExplainedIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2837 <userParam name="NTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2838 <userParam name="CTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2839 <userParam name="MS2IonCurrent" value="336.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2840 </SpectrumIdentificationItem>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2841 <SpectrumIdentificationItem chargeState="5" experimentalMassToCharge="606.2748413085938" calculatedMassToCharge="606.2780151367188" peptide_ref="Pep_S+343TQYQELLQDLS+343EKVK" rank="2" passThreshold="true" id="SII_89_2">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2842 <PeptideEvidenceRef peptideEvidence_ref="PepEv_14237_S+343TQYQELLQDLS+343EKVK_4733"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2843 <PeptideEvidenceRef peptideEvidence_ref="PepEv_19806_S+343TQYQELLQDLS+343EKVK_2691"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2844 <PeptideEvidenceRef peptideEvidence_ref="PepEv_41128_S+343TQYQELLQDLS+343EKVK_2615"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2845 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-35"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2846 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="75"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2847 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="0.0064314604"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2849 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2850 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2851 <userParam name="IsotopeError" value="0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2852 <userParam name="AssumedDissociationMethod" value="HCD"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2853 <userParam name="ExplainedIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2854 <userParam name="NTermIonCurrentRatio" value="0.0"/>
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
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2855 <userParam name="CTermIonCurrentRatio" value="0.0"/>
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2856 <userParam name="MS2IonCurrent" value="336.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2857 </SpectrumIdentificationItem>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2858 </SpectrumIdentificationResult>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2859 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1283 experiment=2" spectraData_ref="SID_1" id="SIR_104">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2860 <SpectrumIdentificationItem chargeState="3" experimentalMassToCharge="591.3255615234375" calculatedMassToCharge="591.3304443359375" peptide_ref="Pep_MAFRDVAVAFTQK" rank="1" passThreshold="true" id="SII_104_1">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2861 <PeptideEvidenceRef peptideEvidence_ref="PepEv_3312_MAFRDVAVAFTQK_1"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2862 <PeptideEvidenceRef peptideEvidence_ref="PepEv_27068_MAFRDVAVAFTQK_1"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2863 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-26"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2864 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="85"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2865 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="0.0048791072"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2866 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="195.31554"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2867 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2868 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2869 <userParam name="IsotopeError" value="0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2870 <userParam name="AssumedDissociationMethod" value="HCD"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2871 <userParam name="ExplainedIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2872 <userParam name="NTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2873 <userParam name="CTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2874 <userParam name="MS2IonCurrent" value="1072.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2875 </SpectrumIdentificationItem>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
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diff changeset
2876 </SpectrumIdentificationResult>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2877 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1223 experiment=2" spectraData_ref="SID_1" id="SIR_84">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2878 <SpectrumIdentificationItem chargeState="4" experimentalMassToCharge="610.7609252929688" calculatedMassToCharge="611.0167236328125" peptide_ref="Pep_ES+343TLHLVLRLRGGC+343" rank="1" passThreshold="true" id="SII_84_1">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2879 <PeptideEvidenceRef peptideEvidence_ref="PepEv_3964_ES+343TLHLVLRLRGGC+343_64"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2880 <PeptideEvidenceRef peptideEvidence_ref="PepEv_30451_ES+343TLHLVLRLRGGC+343_64"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2881 <PeptideEvidenceRef peptideEvidence_ref="PepEv_33552_ES+343TLHLVLRLRGGC+343_292"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2882 <PeptideEvidenceRef peptideEvidence_ref="PepEv_33858_ES+343TLHLVLRLRGGC+343_292"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2883 <PeptideEvidenceRef peptideEvidence_ref="PepEv_44836_ES+343TLHLVLRLRGGC+343_292"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2884 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-31"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2885 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="97"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2886 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="0.006540328"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2887 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="262.83615"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2888 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2889 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2890 <userParam name="IsotopeError" value="-1"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2891 <userParam name="AssumedDissociationMethod" value="HCD"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2892 <userParam name="ExplainedIonCurrentRatio" value="0.008274232"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2893 <userParam name="NTermIonCurrentRatio" value="0.008274232"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2894 <userParam name="CTermIonCurrentRatio" value="0.0"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2895 <userParam name="MS2IonCurrent" value="846.0"/>
2
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2896 <userParam name="NumMatchedMainIons" value="1"/>
8
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2897 <userParam name="MeanErrorAll" value="13.573221"/>
2
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2898 <userParam name="StdevErrorAll" value="0.0"/>
8
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2899 <userParam name="MeanErrorTop7" value="13.573221"/>
2
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2900 <userParam name="StdevErrorTop7" value="0.0"/>
8
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2901 <userParam name="MeanRelErrorAll" value="13.573221"/>
2
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2902 <userParam name="StdevRelErrorAll" value="0.0"/>
8
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2903 <userParam name="MeanRelErrorTop7" value="13.573221"/>
2
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2904 <userParam name="StdevRelErrorTop7" value="0.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2905 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2906 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2907 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1281 experiment=2" spectraData_ref="SID_1" id="SIR_103">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2908 <SpectrumIdentificationItem chargeState="5" experimentalMassToCharge="591.745361328125" calculatedMassToCharge="591.944091796875" peptide_ref="Pep_ILWAQKKAMGSNMEKVCLK" rank="1" passThreshold="true" id="SII_103_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2909 <PeptideEvidenceRef peptideEvidence_ref="PepEv_104712_ILWAQKKAMGSNMEKVCLK_360"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2910 <PeptideEvidenceRef peptideEvidence_ref="PepEv_107586_ILWAQKKAMGSNMEKVCLK_360"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2911 <PeptideEvidenceRef peptideEvidence_ref="PepEv_108718_ILWAQKKAMGSNMEKVCLK_360"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2912 <PeptideEvidenceRef peptideEvidence_ref="PepEv_109818_ILWAQKKAMGSNMEKVCLK_360"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2913 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-35"/>
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2914 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="110"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2915 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="0.009581658"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2916 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="392.11978"/>
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2917 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2918 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2919 <userParam name="IsotopeError" value="-1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2920 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2921 <userParam name="ExplainedIonCurrentRatio" value="0.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2922 <userParam name="NTermIonCurrentRatio" value="0.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2923 <userParam name="CTermIonCurrentRatio" value="0.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2924 <userParam name="MS2IonCurrent" value="571.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2925 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2926 <SpectrumIdentificationItem chargeState="5" experimentalMassToCharge="591.745361328125" calculatedMassToCharge="591.944091796875" peptide_ref="Pep_LCVKEMNSGMAKKQAWLIK" rank="2" passThreshold="true" id="SII_103_2">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2927 <PeptideEvidenceRef peptideEvidence_ref="PepEv_49100_LCVKEMNSGMAKKQAWLIK_723"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2928 <PeptideEvidenceRef peptideEvidence_ref="PepEv_52006_LCVKEMNSGMAKKQAWLIK_755"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2929 <PeptideEvidenceRef peptideEvidence_ref="PepEv_53106_LCVKEMNSGMAKKQAWLIK_723"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2930 <PeptideEvidenceRef peptideEvidence_ref="PepEv_54206_LCVKEMNSGMAKKQAWLIK_723"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2931 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-40"/>
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09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2932 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="110"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2933 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="0.018137826"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2934 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="742.27234"/>
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058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2935 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2936 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2937 <userParam name="IsotopeError" value="-1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2938 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2939 <userParam name="ExplainedIonCurrentRatio" value="0.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2940 <userParam name="NTermIonCurrentRatio" value="0.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2941 <userParam name="CTermIonCurrentRatio" value="0.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2942 <userParam name="MS2IonCurrent" value="571.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2943 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2944 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2945 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1213 experiment=2" spectraData_ref="SID_1" id="SIR_54">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2946 <SpectrumIdentificationItem chargeState="5" experimentalMassToCharge="497.6971435546875" calculatedMassToCharge="497.8994140625" peptide_ref="Pep_VFIQMGGRLRLVLHLTSEK" rank="1" passThreshold="true" id="SII_54_1">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2947 <PeptideEvidenceRef peptideEvidence_ref="PepEv_89308_VFIQMGGRLRLVLHLTSEK_73"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2948 <PeptideEvidenceRef peptideEvidence_ref="PepEv_89384_VFIQMGGRLRLVLHLTSEK_149"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2949 <PeptideEvidenceRef peptideEvidence_ref="PepEv_89460_VFIQMGGRLRLVLHLTSEK_225"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2950 <PeptideEvidenceRef peptideEvidence_ref="PepEv_89614_VFIQMGGRLRLVLHLTSEK_73"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2951 <PeptideEvidenceRef peptideEvidence_ref="PepEv_89690_VFIQMGGRLRLVLHLTSEK_149"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2952 <PeptideEvidenceRef peptideEvidence_ref="PepEv_89766_VFIQMGGRLRLVLHLTSEK_225"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2953 <PeptideEvidenceRef peptideEvidence_ref="PepEv_100592_VFIQMGGRLRLVLHLTSEK_73"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2954 <PeptideEvidenceRef peptideEvidence_ref="PepEv_100668_VFIQMGGRLRLVLHLTSEK_149"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2955 <PeptideEvidenceRef peptideEvidence_ref="PepEv_100744_VFIQMGGRLRLVLHLTSEK_225"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2956 <PeptideEvidenceRef peptideEvidence_ref="PepEv_101701_VFIQMGGRLRLVLHLTSEK_78"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2957 <PeptideEvidenceRef peptideEvidence_ref="PepEv_101777_VFIQMGGRLRLVLHLTSEK_154"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2958 <PeptideEvidenceRef peptideEvidence_ref="PepEv_101853_VFIQMGGRLRLVLHLTSEK_230"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2959 <PeptideEvidenceRef peptideEvidence_ref="PepEv_101929_VFIQMGGRLRLVLHLTSEK_306"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2960 <PeptideEvidenceRef peptideEvidence_ref="PepEv_102005_VFIQMGGRLRLVLHLTSEK_382"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2961 <PeptideEvidenceRef peptideEvidence_ref="PepEv_102081_VFIQMGGRLRLVLHLTSEK_458"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2962 <PeptideEvidenceRef peptideEvidence_ref="PepEv_102157_VFIQMGGRLRLVLHLTSEK_534"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2963 <PeptideEvidenceRef peptideEvidence_ref="PepEv_102233_VFIQMGGRLRLVLHLTSEK_610"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2964 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-35"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2965 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="80"/>
8
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2966 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="0.011701179"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2967 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="478.85904"/>
2
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2968 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2969 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2970 <userParam name="IsotopeError" value="-1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2971 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2972 <userParam name="ExplainedIonCurrentRatio" value="0.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2973 <userParam name="NTermIonCurrentRatio" value="0.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2974 <userParam name="CTermIonCurrentRatio" value="0.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2975 <userParam name="MS2IonCurrent" value="1027.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2976 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2977 <SpectrumIdentificationItem chargeState="5" experimentalMassToCharge="497.6971435546875" calculatedMassToCharge="497.8994140625" peptide_ref="Pep_ESTLHLVLRLRGGMQIFVK" rank="2" passThreshold="true" id="SII_54_2">
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2978 <PeptideEvidenceRef peptideEvidence_ref="PepEv_33324_ESTLHLVLRLRGGMQIFVK_64"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2979 <PeptideEvidenceRef peptideEvidence_ref="PepEv_33400_ESTLHLVLRLRGGMQIFVK_140"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2980 <PeptideEvidenceRef peptideEvidence_ref="PepEv_33476_ESTLHLVLRLRGGMQIFVK_216"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2981 <PeptideEvidenceRef peptideEvidence_ref="PepEv_33630_ESTLHLVLRLRGGMQIFVK_64"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2982 <PeptideEvidenceRef peptideEvidence_ref="PepEv_33706_ESTLHLVLRLRGGMQIFVK_140"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2983 <PeptideEvidenceRef peptideEvidence_ref="PepEv_33782_ESTLHLVLRLRGGMQIFVK_216"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2984 <PeptideEvidenceRef peptideEvidence_ref="PepEv_44608_ESTLHLVLRLRGGMQIFVK_64"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2985 <PeptideEvidenceRef peptideEvidence_ref="PepEv_44684_ESTLHLVLRLRGGMQIFVK_140"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2986 <PeptideEvidenceRef peptideEvidence_ref="PepEv_44760_ESTLHLVLRLRGGMQIFVK_216"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2987 <PeptideEvidenceRef peptideEvidence_ref="PepEv_45712_ESTLHLVLRLRGGMQIFVK_64"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2988 <PeptideEvidenceRef peptideEvidence_ref="PepEv_45788_ESTLHLVLRLRGGMQIFVK_140"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2989 <PeptideEvidenceRef peptideEvidence_ref="PepEv_45864_ESTLHLVLRLRGGMQIFVK_216"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2990 <PeptideEvidenceRef peptideEvidence_ref="PepEv_45940_ESTLHLVLRLRGGMQIFVK_292"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2991 <PeptideEvidenceRef peptideEvidence_ref="PepEv_46016_ESTLHLVLRLRGGMQIFVK_368"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2992 <PeptideEvidenceRef peptideEvidence_ref="PepEv_46092_ESTLHLVLRLRGGMQIFVK_444"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2993 <PeptideEvidenceRef peptideEvidence_ref="PepEv_46168_ESTLHLVLRLRGGMQIFVK_520"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2994 <PeptideEvidenceRef peptideEvidence_ref="PepEv_46244_ESTLHLVLRLRGGMQIFVK_596"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2995 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-39"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2996 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="80"/>
8
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2997 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="0.019098723"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
2998 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="781.5961"/>
2
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
2999 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
3000 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
3001 <userParam name="IsotopeError" value="-1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
3002 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
3003 <userParam name="ExplainedIonCurrentRatio" value="9.7370986E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
3004 <userParam name="NTermIonCurrentRatio" value="9.7370986E-4"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
3005 <userParam name="CTermIonCurrentRatio" value="0.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
3006 <userParam name="MS2IonCurrent" value="1027.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
3007 <userParam name="NumMatchedMainIons" value="1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
3008 <userParam name="MeanErrorAll" value="1.8923733"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
3009 <userParam name="StdevErrorAll" value="0.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
3010 <userParam name="MeanErrorTop7" value="1.8923733"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
3011 <userParam name="StdevErrorTop7" value="0.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
3012 <userParam name="MeanRelErrorAll" value="-1.8923733"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
3013 <userParam name="StdevRelErrorAll" value="0.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
3014 <userParam name="MeanRelErrorTop7" value="-1.8923733"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
3015 <userParam name="StdevRelErrorTop7" value="0.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
3016 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
3017 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
3018 <SpectrumIdentificationResult spectrumID="sample=1 period=1 cycle=1428 experiment=2" spectraData_ref="SID_1" id="SIR_105">
8
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
3019 <SpectrumIdentificationItem chargeState="4" experimentalMassToCharge="585.301513671875" calculatedMassToCharge="585.5540161132812" peptide_ref="Pep_[-17QTVEAYSAAVQSQLQWMK" rank="1" passThreshold="true" id="SII_105_1">
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
3020 <PeptideEvidenceRef peptideEvidence_ref="PepEv_10335_[-17QTVEAYSAAVQSQLQWMK_831"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
3021 <PeptideEvidenceRef peptideEvidence_ref="PepEv_17946_[-17QTVEAYSAAVQSQLQWMK_831"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
3022 <PeptideEvidenceRef peptideEvidence_ref="PepEv_39268_[-17QTVEAYSAAVQSQLQWMK_755"/>
2
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
3023 <cvParam cvRef="PSI-MS" accession="MS:1002049" name="MS-GF:RawScore" value="-47"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
3024 <cvParam cvRef="PSI-MS" accession="MS:1002050" name="MS-GF:DeNovoScore" value="93"/>
8
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
3025 <cvParam cvRef="PSI-MS" accession="MS:1002052" name="MS-GF:SpecEValue" value="0.02323054"/>
09e0ae6f661b planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit d79136535ee6feaee27c7764251e9ea047e683bb
galaxyp
parents: 2
diff changeset
3026 <cvParam cvRef="PSI-MS" accession="MS:1002053" name="MS-GF:EValue" value="947.295"/>
2
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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diff changeset
3027 <cvParam cvRef="PSI-MS" accession="MS:1002054" name="MS-GF:QValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
3028 <cvParam cvRef="PSI-MS" accession="MS:1002055" name="MS-GF:PepQValue" value="1.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
3029 <userParam name="IsotopeError" value="-1"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
3030 <userParam name="AssumedDissociationMethod" value="HCD"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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diff changeset
3031 <userParam name="ExplainedIonCurrentRatio" value="0.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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diff changeset
3032 <userParam name="NTermIonCurrentRatio" value="0.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
3033 <userParam name="CTermIonCurrentRatio" value="0.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
parents:
diff changeset
3034 <userParam name="MS2IonCurrent" value="330.0"/>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
3035 </SpectrumIdentificationItem>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
3036 </SpectrumIdentificationResult>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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diff changeset
3037 </SpectrumIdentificationList>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
galaxyp
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diff changeset
3038 </AnalysisData>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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diff changeset
3039 </DataCollection>
058a2ab1d462 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msgfplus commit b4871f9659a924a68430aed3a93f4f9bad733fd6
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diff changeset
3040 </MzIdentML>