Mercurial > repos > galaxyp > msstats
changeset 7:de7593c29499 draft default tip
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/msstats commit 63cff07026599f16d57da27c5897b7e88ad41ae5
| author | galaxyp |
|---|---|
| date | Tue, 12 Mar 2024 11:46:51 +0000 |
| parents | b7034eff0db1 |
| children | |
| files | msstats.xml |
| diffstat | 1 files changed, 4 insertions(+), 1 deletions(-) [+] |
line wrap: on
line diff
--- a/msstats.xml Tue Jan 31 18:14:55 2023 +0000 +++ b/msstats.xml Tue Mar 12 11:46:51 2024 +0000 @@ -23,6 +23,9 @@ </xml> </macros> + <xrefs> + <xref type="bio.tools">msstatstmt</xref> + </xrefs> <requirements> <requirement type="package" version="@TOOL_VERSION@">bioconductor-msstats</requirement> </requirements> @@ -1020,7 +1023,7 @@ **Input data** -- Data in tabular or csv format, either in the 10-column MSstats format or the outputs of spectral processing tools such as `MaxQuant <http://coxdocs.org/doku.php?id=maxquant:start/>`_, `OpenSWATH <http://openswath.org/en/latest/>`_ +- Data in tabular or csv format, either in the 10-column MSstats format or the outputs of spectral processing tools such as `MaxQuant <https://cox-labs.github.io/coxdocs/maxquant_instructions.html>`_, `OpenSWATH <http://openswath.org/en/latest/>`_ - MSstats format: tabular file with 10 column either manually curated or other sources such as Swath2stats tool which is implemented in Pyprophet export in Galaxy. For manual curation: Names of headers are fixed but not case sensitive: