Mercurial > repos > galaxyp > mzxml2search
comparison mzxml2search.xml @ 2:5c90d21d6c5a draft default tip
fixed version match
author | galaxyp |
---|---|
date | Thu, 20 Jun 2013 16:34:55 -0400 |
parents | 6e7a5d29c866 |
children |
comparison
equal
deleted
inserted
replaced
1:6e7a5d29c866 | 2:5c90d21d6c5a |
---|---|
1 <tool id="mzxml2search" name="Search Formatter" version="0.1.0"> | 1 <tool id="mzxml2search" name="Search Formatter" version="0.1.0"> |
2 <description>Use MzXML2Search to convert peak lists.</description> | 2 <description>Use MzXML2Search to convert peak lists.</description> |
3 | 3 |
4 <requirements> | 4 <requirements> |
5 <requirement type="package">trans_proteomic_pipeline</requirement> | 5 <requirement type="package" version="4.6.1">trans_proteomic_pipeline</requirement> |
6 </requirements> | 6 </requirements> |
7 | 7 |
8 <command> | 8 <command> |
9 ln -s ${input} input.${input.ext} ; | 9 ln -s ${input} input.${input.ext} ; |
10 MzXML2Search -B${min_mhp_mass} -T${max_mhp_mass} -P${min_peak_count} -I${min_peak_intensity} -${output_type} input.${input.ext} ; | 10 MzXML2Search -B${min_mhp_mass} -T${max_mhp_mass} -P${min_peak_count} -I${min_peak_intensity} -${output_type} input.${input.ext} ; |