Mercurial > repos > galaxyp > openms_decoydatabase

diff DecoyDatabase.xml @ 9:2e19b070f997 draft

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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit f608f41d45664d04d3124c6ebc791bf8a566b3c5
author galaxyp
date Wed, 15 May 2019 08:24:38 -0400
parents 7414c55d1bff
children 622bb8ee4942
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line diff
--- a/DecoyDatabase.xml	Tue Mar 20 14:51:47 2018 -0400
+++ b/DecoyDatabase.xml	Wed May 15 08:24:38 2019 -0400
@@ -10,7 +10,7 @@
   <expand macro="references"/>
   <expand macro="stdio"/>
   <expand macro="requirements"/>
-  <command>DecoyDatabase
+  <command detect_errors="aggressive"><![CDATA[DecoyDatabase
 
 -in
   #for token in $param_in:
@@ -46,7 +46,7 @@
   -force
 #end if
 #end if
-</command>
+]]></command>
   <inputs>
     <param name="param_in" type="data" format="fasta" multiple="true" optional="False" size="30" label="Input FASTA file(s), each containing a database" help="(-in) It is recommended to include a contaminant database as well">
       <sanitizer>
@@ -89,5 +89,5 @@
   <help>Create decoy protein DB from forward protein DB.
 
 
-For more information, visit http://ftp.mi.fu-berlin.de/OpenMS/release-documentation/html/UTILS_DecoyDatabase.html</help>
+For more information, visit https://abibuilder.informatik.uni-tuebingen.de/archive/openms/Documentation/release/2.3.0/html/UTILS_DecoyDatabase.html</help>
 </tool>