# HG changeset patch # User galaxyp # Date 1493313650 14400 # Node ID a07f3900f27183a622c78e1dd18a06897a17beb6 # Parent 77f29f5244d95ad7d2027ffa49423b2fcaf65975 planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit 50c26f7fbe8a2bd1347c860d7a62480865efc254 diff -r 77f29f5244d9 -r a07f3900f271 readme.md --- a/readme.md Tue Apr 18 16:05:20 2017 -0400 +++ b/readme.md Thu Apr 27 13:20:50 2017 -0400 @@ -102,10 +102,32 @@ [...] ]]> ``` + + * In `IDFileConverter.xml` the following is needed in the command section at the beginning (check your file to know what to copy where): + + ``` + + ``` + + * In `IDFileConverter.xml` and `FileConverter.xml` add `auto_format="true"` to the output, e.g.: - + - `` + - `` * To add an example test case to `DecoyDatabase.xml` add the following after the output section. If standard settings change you might have to adjust the options and/or the test files.