comparison FuzzyDiff.xml @ 3:2065b42a39e2 draft

planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit 9a14ed1f2d3c9abdfb080251b3419dd9e0c52a14

2:a09c7f747b9c

<?xml version='1.0' encoding='UTF-8'?>
<!--This is a configuration file for the integration of a tools into Galaxy (https://galaxyproject.org/). This file was automatically generated using CTD2Galaxy.-->
<!--Proposed Tool Section: [Utilities]-->
<tool id="FuzzyDiff" name="FuzzyDiff" version="2.1.0">
  <description>Compares two files, tolerating numeric differences.</description>
  <macros>
    <token name="@EXECUTABLE@">FuzzyDiff</token>
    <import>macros.xml</import>
  </macros>

#end if
#end if
> $param_stdout
</command>
  <inputs>
    <param name="param_in1" type="data" format="text" label="first input file" help="(-in1) "/>
    <param name="param_in2" type="data" format="text" label="second input file" help="(-in2) "/>
    <param name="param_ratio" type="float" min="1.0" optional="True" value="1.0" label="acceptable relative erro" help="(-ratio) Only one of 'ratio' or 'absdiff' has to be satisfied.  Use &quot;absdiff&quot; to deal with cases like &quot;zero vs. epsilon&quot;"/>
    <param name="param_absdiff" type="float" min="0.0" optional="True" value="0.0" label="acceptable absolute difference" help="(-absdiff) Only one of 'ratio' or 'absdiff' has to be satisfied. "/>
    <param name="param_verbose" type="integer" min="0" max="3" optional="True" value="2" label="set verbose level: &lt;br&gt;0 = very quiet mode (absolutely no output) &lt;br&gt;1 = quiet mode (no output unless differences detected) &lt;br&gt;2 = default (include summary at end) &lt;br&gt;3 = continue after errors" help="(-verbose) "/>
    <param name="param_tab_width" type="integer" min="1" optional="True" value="8" label="tabulator width, used for calculation of column numbers" help="(-tab_width) "/>
    <param name="param_first_column" type="integer" min="0" optional="True" value="1" label="number of first column, used for calculation of column numbers" help="(-first_column) "/>

      </repeat>
      <param name="param_force" display="radio" type="boolean" truevalue="-force" falsevalue="" checked="false" optional="True" label="Overwrite tool specific checks" help="(-force) "/>
    </expand>
  </inputs>
  <outputs>
    <data name="param_stdout" format="text" label="Output from stdout"/>
  </outputs>
  <help>Compares two files, tolerating numeric differences.


For more information, visit http://ftp.mi.fu-berlin.de/OpenMS/release-documentation/html/UTILS_FuzzyDiff.html</help>

3:2065b42a39e2

<?xml version='1.0' encoding='UTF-8'?>
<!--This is a configuration file for the integration of a tools into Galaxy (https://galaxyproject.org/). This file was automatically generated using CTD2Galaxy.-->
<!--Proposed Tool Section: [Utilities]-->
<tool id="FuzzyDiff" name="FuzzyDiff" version="2.2.0.1">
  <description>Compares two files, tolerating numeric differences.</description>
  <macros>
    <token name="@EXECUTABLE@">FuzzyDiff</token>
    <import>macros.xml</import>
  </macros>

#end if
#end if
> $param_stdout
</command>
  <inputs>
    <param name="param_in1" type="data" format="txt" label="first input file" help="(-in1) "/>
    <param name="param_in2" type="data" format="txt" label="second input file" help="(-in2) "/>
    <param name="param_ratio" type="float" min="1.0" optional="True" value="1.0" label="acceptable relative erro" help="(-ratio) Only one of 'ratio' or 'absdiff' has to be satisfied.  Use &quot;absdiff&quot; to deal with cases like &quot;zero vs. epsilon&quot;"/>
    <param name="param_absdiff" type="float" min="0.0" optional="True" value="0.0" label="acceptable absolute difference" help="(-absdiff) Only one of 'ratio' or 'absdiff' has to be satisfied. "/>
    <param name="param_verbose" type="integer" min="0" max="3" optional="True" value="2" label="set verbose level: &lt;br&gt;0 = very quiet mode (absolutely no output) &lt;br&gt;1 = quiet mode (no output unless differences detected) &lt;br&gt;2 = default (include summary at end) &lt;br&gt;3 = continue after errors" help="(-verbose) "/>
    <param name="param_tab_width" type="integer" min="1" optional="True" value="8" label="tabulator width, used for calculation of column numbers" help="(-tab_width) "/>
    <param name="param_first_column" type="integer" min="0" optional="True" value="1" label="number of first column, used for calculation of column numbers" help="(-first_column) "/>

      </repeat>
      <param name="param_force" display="radio" type="boolean" truevalue="-force" falsevalue="" checked="false" optional="True" label="Overwrite tool specific checks" help="(-force) "/>
    </expand>
  </inputs>
  <outputs>
    <data name="param_stdout" format="txt" label="Output from stdout"/>
  </outputs>
  <help>Compares two files, tolerating numeric differences.


For more information, visit http://ftp.mi.fu-berlin.de/OpenMS/release-documentation/html/UTILS_FuzzyDiff.html</help>