Mercurial > repos > galaxyp > openms_highresprecursormasscorrector

comparison HighResPrecursorMassCorrector.xml @ 1:108f550ea3c4 draft

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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit 820d990f9217706e693b8a2f1da91e13c09cb0fb
author galaxyp
date Tue, 18 Apr 2017 16:06:58 -0400
parents e37289d08990
children 3419097ac19f
comparison
equal deleted inserted replaced
0:e37289d08990 1:108f550ea3c4
26 #end if 26 #end if
27 #if $param_feature_mz_tolerance: 27 #if $param_feature_mz_tolerance:
28 -feature:mz_tolerance $param_feature_mz_tolerance 28 -feature:mz_tolerance $param_feature_mz_tolerance
29 #end if 29 #end if
30 #if $param_feature_mz_tolerance_unit: 30 #if $param_feature_mz_tolerance_unit:
31 -feature:mz_tolerance_unit $param_feature_mz_tolerance_unit 31 -feature:mz_tolerance_unit
32 #if " " in str($param_feature_mz_tolerance_unit):
33 "$param_feature_mz_tolerance_unit"
34 #else
35 $param_feature_mz_tolerance_unit
36 #end if
32 #end if 37 #end if
33 #if $param_feature_rt_tolerance: 38 #if $param_feature_rt_tolerance:
34 -feature:rt_tolerance $param_feature_rt_tolerance 39 -feature:rt_tolerance $param_feature_rt_tolerance
35 #end if 40 #end if
36 #if $param_feature_believe_charge: 41 #if $param_feature_believe_charge:
44 #end if 49 #end if
45 #if $param_nearest_peak_mz_tolerance: 50 #if $param_nearest_peak_mz_tolerance:
46 -nearest_peak:mz_tolerance $param_nearest_peak_mz_tolerance 51 -nearest_peak:mz_tolerance $param_nearest_peak_mz_tolerance
47 #end if 52 #end if
48 #if $param_nearest_peak_mz_tolerance_unit: 53 #if $param_nearest_peak_mz_tolerance_unit:
49 -nearest_peak:mz_tolerance_unit $param_nearest_peak_mz_tolerance_unit 54 -nearest_peak:mz_tolerance_unit
55 #if " " in str($param_nearest_peak_mz_tolerance_unit):
56 "$param_nearest_peak_mz_tolerance_unit"
57 #else
58 $param_nearest_peak_mz_tolerance_unit
59 #end if
50 #end if 60 #end if
51 #if $adv_opts.adv_opts_selector=='advanced': 61 #if $adv_opts.adv_opts_selector=='advanced':
52 #if $adv_opts.param_force: 62 #if $adv_opts.param_force:
53 -force 63 -force
54 #end if 64 #end if