# This is a sample file distributed with Galaxy that enables tools # to use pepnovo models # The file has three tab separated columns: name, value, and path. # The idea is that there are a number of models in a directory: # - each model directory has a unique name (columns 2 and 0) # - each model can contain a set of models (column 1) # # The following example works fo the default models from # http://proteomics.ucsd.edu/Software/PepNovo.html (just remove the comment # chars and replace DIR_TO_PEPNOVO_MODELS) #default_models CID_IT_TRYP DIR_TO_PEPNOVO_MODELS #default_models LTQ_COMP DIR_TO_PEPNOVO_MODELS #default_models DBC4_PEAK DIR_TO_PEPNOVO_MODELS #default_models CID_IT_TRYP_TAG5 DIR_TO_PEPNOVO_MODELS #default_models CID_IT_TRYP_TAG6 DIR_TO_PEPNOVO_MODELS #default_models ITDNV_PEAK DIR_TO_PEPNOVO_MODELS #default_models CID_IT_TRYP_SCORE DIR_TO_PEPNOVO_MODELS #default_models CID_IT_TRYP_TAG3 DIR_TO_PEPNOVO_MODELS #default_models CID_IT_TRYP_DNVPART DIR_TO_PEPNOVO_MODELS #default_models CID_IT_TRYP_TAG4 DIR_TO_PEPNOVO_MODELS #default_models CID_IT_TRYP_DB DIR_TO_PEPNOVO_MODELS #default_models CID_IT_TRYP_CSP DIR_TO_PEPNOVO_MODELS