Mercurial > repos > galaxyp > openms_internalcalibration
comparison InternalCalibration.xml @ 10:cca2b6c3ae61 draft
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit 6e9568c650259d95b230d1a243e90f73a19564c2"
| author | galaxyp |
|---|---|
| date | Thu, 24 Sep 2020 09:56:27 +0000 |
| parents | 4682dcff7e2f |
| children | 6c58aa0ed5c1 |
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| 9:4682dcff7e2f | 10:cca2b6c3ae61 |
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| 147 </section> | 147 </section> |
| 148 <section name="goodness" title="Thresholds for accepting calibration success" help="" expanded="false"> | 148 <section name="goodness" title="Thresholds for accepting calibration success" help="" expanded="false"> |
| 149 <param name="median" argument="-goodness:median" type="float" optional="true" value="4.0" label="The median ppm error of calibrated masses must be smaller than this threshold" help=""/> | 149 <param name="median" argument="-goodness:median" type="float" optional="true" value="4.0" label="The median ppm error of calibrated masses must be smaller than this threshold" help=""/> |
| 150 <param name="MAD" argument="-goodness:MAD" type="float" optional="true" value="2.0" label="The median absolute deviation of the ppm error of calibrated masses must be smaller than this threshold" help=""/> | 150 <param name="MAD" argument="-goodness:MAD" type="float" optional="true" value="2.0" label="The median absolute deviation of the ppm error of calibrated masses must be smaller than this threshold" help=""/> |
| 151 </section> | 151 </section> |
| 152 <section name="quality_control" title="Tables and plots to verify calibration performance" help="" expanded="false"/> | |
| 153 <expand macro="adv_opts_macro"> | 152 <expand macro="adv_opts_macro"> |
| 154 <param name="force" argument="-force" type="boolean" truevalue="true" falsevalue="false" checked="false" label="Overwrite tool specific checks" help=""/> | 153 <param name="force" argument="-force" type="boolean" truevalue="true" falsevalue="false" checked="false" label="Overwrite tool specific checks" help=""/> |
| 155 <param name="test" argument="-test" type="hidden" optional="true" value="False" label="Enables the test mode (needed for internal use only)" help=""> | 154 <param name="test" argument="-test" type="hidden" optional="true" value="False" label="Enables the test mode (needed for internal use only)" help=""> |
| 156 <expand macro="list_string_san"/> | 155 <expand macro="list_string_san"/> |
| 157 </param> | 156 </param> |